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51807 commits

Author SHA1 Message Date
Ricardo Wurmus
a8a7ba9acb
gnu: Add r-acfmperiod.
* gnu/packages/cran.scm (r-acfmperiod): New variable.
2019-12-13 22:41:40 +01:00
Ricardo Wurmus
43a70edc29
gnu: Add r-acet.
* gnu/packages/cran.scm (r-acet): New variable.
2019-12-13 22:41:40 +01:00
Ricardo Wurmus
1442ca7340
gnu: Add r-acebayes.
* gnu/packages/cran.scm (r-acebayes): New variable.
2019-12-13 22:41:40 +01:00
Ricardo Wurmus
390bc8726b
gnu: Add r-lhs.
* gnu/packages/cran.scm (r-lhs): New variable.
2019-12-13 22:41:39 +01:00
Ricardo Wurmus
e6bf147293
gnu: Add r-randtoolbox.
* gnu/packages/cran.scm (r-randtoolbox): New variable.
2019-12-13 22:41:39 +01:00
Ricardo Wurmus
ca1bc50cad
gnu: Add r-rngwell.
* gnu/packages/cran.scm (r-rngwell): New variable.
2019-12-13 22:41:39 +01:00
Ricardo Wurmus
b441dac7af
gnu: Add r-ace2fastq.
* gnu/packages/cran.scm (r-ace2fastq): New variable.
2019-12-13 22:41:39 +01:00
Ricardo Wurmus
b8d52fe277
gnu: Add r-accsda.
* gnu/packages/cran.scm (r-accsda): New variable.
2019-12-13 22:41:39 +01:00
Ricardo Wurmus
7199d2a5fc
gnu: Add r-sparselda.
* gnu/packages/cran.scm (r-sparselda): New variable.
2019-12-13 22:41:39 +01:00
Ricardo Wurmus
c909b710a4
gnu: Add r-elasticnet.
* gnu/packages/cran.scm (r-elasticnet): New variable.
2019-12-13 22:41:39 +01:00
Ricardo Wurmus
7e2e46cbe2
gnu: Add r-mda.
* gnu/packages/cran.scm (r-mda): New variable.
2019-12-13 22:41:39 +01:00
Ricardo Wurmus
592d423ca5
gnu: Add r-accrued.
* gnu/packages/cran.scm (r-accrued): New variable.
2019-12-13 22:41:39 +01:00
Ricardo Wurmus
c5b86d3a18
gnu: Add r-accrual.
* gnu/packages/cran.scm (r-accrual): New variable.
2019-12-13 22:41:39 +01:00
Ricardo Wurmus
f9d9c83183
gnu: Add r-tcltk2.
* gnu/packages/cran.scm (r-tcltk2): New variable.
2019-12-13 22:41:38 +01:00
Ricardo Wurmus
5a5431e406
gnu: Add r-fgui.
* gnu/packages/cran.scm (r-fgui): New variable.
2019-12-13 22:41:38 +01:00
Ricardo Wurmus
bba4ec62e3
gnu: Add r-smpracticals.
* gnu/packages/cran.scm (r-smpracticals): New variable.
2019-12-13 22:41:38 +01:00
Ricardo Wurmus
0379a16761
gnu: Add r-accept.
* gnu/packages/cran.scm (r-accept): New variable.
2019-12-13 22:41:38 +01:00
Ricardo Wurmus
72b67e0b36
gnu: Add r-activedriverwgs.
* gnu/packages/bioconductor.scm (r-activedriverwgs): New variable.
2019-12-13 22:41:38 +01:00
Ricardo Wurmus
bd74d7e6fc
gnu: Add r-abtest.
* gnu/packages/cran.scm (r-abtest): New variable.
2019-12-13 22:41:38 +01:00
Ricardo Wurmus
a99c4c7584
gnu: Add r-abstractr.
* gnu/packages/cran.scm (r-abstractr): New variable.
2019-12-13 22:41:38 +01:00
Ricardo Wurmus
2ecd4e3bfd
gnu: Add r-emojifont.
* gnu/packages/cran.scm (r-emojifont): New variable.
2019-12-13 22:41:38 +01:00
Ricardo Wurmus
d7937243ba
gnu: Add r-showtext.
* gnu/packages/cran.scm (r-showtext): New variable.
2019-12-13 22:41:38 +01:00
Ricardo Wurmus
369e1bb6a8
gnu: Add r-showtextdb.
* gnu/packages/cran.scm (r-showtextdb): New variable.
2019-12-13 22:41:38 +01:00
Ricardo Wurmus
322e8d8579
gnu: Add r-sysfonts.
* gnu/packages/cran.scm (r-sysfonts): New variable.
2019-12-13 22:41:38 +01:00
Ricardo Wurmus
8990fc1584
gnu: Add r-rintrojs.
* gnu/packages/cran.scm (r-rintrojs): New variable.
2019-12-13 22:41:37 +01:00
Ricardo Wurmus
3e33377767
gnu: Add r-abemus.
* gnu/packages/cran.scm (r-abemus): New variable.
2019-12-13 22:41:37 +01:00
Ricardo Wurmus
ae07172c65
gnu: Add r-abcrlda.
* gnu/packages/cran.scm (r-abcrlda): New variable.
2019-12-13 22:41:37 +01:00
Ricardo Wurmus
84822497c2
gnu: Add r-abcdefba.
* gnu/packages/cran.scm (r-abcdefba): New variable.
2019-12-13 22:41:37 +01:00
Ricardo Wurmus
72e5c6e95f
gnu: Add r-rglpk.
* gnu/packages/cran.scm (r-rglpk): New variable.
2019-12-13 22:41:37 +01:00
Ricardo Wurmus
647ff4a98b
gnu: Add r-abcadm.
* gnu/packages/cran.scm (r-abcadm): New variable.
2019-12-13 22:41:37 +01:00
Ricardo Wurmus
8fed766a7d
gnu: Add r-abc-rap.
* gnu/packages/cran.scm (r-abc-rap): New variable.
2019-12-13 22:41:37 +01:00
Ricardo Wurmus
595d950223
gnu: Add r-abacus.
* gnu/packages/cran.scm (r-abacus): New variable.
2019-12-13 22:41:37 +01:00
Ricardo Wurmus
6e6fa954af
gnu: r-shiny: Update to 1.4.0.
* gnu/packages/cran.scm (r-shiny): Update to 1.4.0.
[arguments]: Update list of JavaScript files to replace.
[propagated-inputs]: Add r-fastmap.
2019-12-13 22:41:37 +01:00
Ricardo Wurmus
c20a81eed1
gnu: Add r-fastmap.
* gnu/packages/cran.scm (r-fastmap): New variable.
2019-12-13 22:41:37 +01:00
Ricardo Wurmus
303c7d1dff
gnu: Add r-aasea.
* gnu/packages/cran.scm (r-aasea): New variable.
2019-12-13 22:41:37 +01:00
Ricardo Wurmus
59beb0d23f
gnu: Add r-networkd3.
* gnu/packages/cran.scm (r-networkd3): New variable.
2019-12-13 22:41:36 +01:00
Ricardo Wurmus
db07641a67
gnu: Add r-bios2cor.
* gnu/packages/cran.scm (r-bios2cor): New variable.
2019-12-13 22:41:36 +01:00
Ricardo Wurmus
e44c4cd73c
gnu: Add r-bio3d.
* gnu/packages/cran.scm (r-bio3d): New variable.
2019-12-13 22:41:36 +01:00
Ricardo Wurmus
ba4fcea499
gnu: r-desolve: Update description.
* gnu/packages/cran.scm (r-desolve)[description]: Use texinfo syntax.
2019-12-13 22:41:33 +01:00
Efraim Flashner
c45fdf90a9
gnu: imlib2: Update to 1.6.1.
* gnu/packages/image.scm (imlib2): Update to 1.6.1.
2019-12-13 22:57:31 +02:00
Brett Gilio
e19a539388
gnu: emacs-telega: Correct path coding for ffmpeg.
* gnu/packages/emacs-xyz.scm (emacs-telega)[arguments]: Continuation of the
  previous patch. Adds a hard-coded path from NAME `ffmpeg-bin` to work around
  issue of ffmpeg not being found on the system PATH.
2019-12-13 12:37:15 -06:00
Leo Prikler
5f12df7ea6
gnu: emacs-telega: Patch ffplay instead of propagating.
* gnu/packages/emacs-xyz.scm (emacs-telega) [phases]:
<telega-data-patch>: Rename to telega-paths-patch.
<telega-paths-patch>: Substitute ffplay path for patching.
[propagated-inputs] <ffmpeg>: Remove.
[inputs] <ffmpeg>: Add.

Fixes: #38590 <https://bugs.gnu.org/38590>

Signed-off-by: Brett Gilio <brettg@posteo.net>
Co-authored-by: Brett Gilio <brettg@posteo.net>
2019-12-13 12:01:20 -06:00
Ludovic Courtès
085bdfd092
gnu: guile-next: Update to 2.9.7.
* gnu/packages/guile.scm (guile-next): Update to 2.9.7.
2019-12-13 18:04:04 +01:00
Ludovic Courtès
94fea21b21
gnu: hdf5@1.10: Update to 1.10.5.
* gnu/packages/maths.scm (hdf5-1.10): Update to 1.10.5.  Remove
"hdf5-mpi-deprecations.patch".
* gnu/packages/patches/hdf5-mpi-deprecations.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-12-13 18:04:04 +01:00
Ludovic Courtès
6212146f88
import: utils: Update docstring of 'recursive-import'.
This is a followup to 70a8e13277.

* guix/import/utils.scm (recursive-import): Update docstring.
2019-12-13 18:04:04 +01:00
Brett Gilio
19ba75dc02
gnu: python-yapf: Update to 0.29.0.
* gnu/packages/python-xyz.scm (python-yapf): Update to 0.29.0.
2019-12-13 07:30:13 -06:00
Brett Gilio
d1efb11a0c
gnu: python-blessings: Update comment on test suite.
* gnu/packages/terminals.scm (python-blessings): Test suite has been revised.
[arguments]: Change comment to reflect change in test suite regarding TTY.
[native-inputs]: Pass python-six, which is required for test suite.
2019-12-13 07:06:39 -06:00
Brett Gilio
5076c13b49
gnu: python-blessings: Update to 1.7.
* gnu/packages/terminals.scm (python-blessings): Update to 1.7.
2019-12-13 07:06:27 -06:00
Brett Gilio
2ecbba2408
gnu: python-semver: Adjust indentation.
* gnu/packages/python-xyz.scm (python-semver): Adjust indentation.
2019-12-13 06:56:12 -06:00
Brett Gilio
c587482dcb
gnu: python-semver: Do not patch virtualenv for tests.
* gnu/packages/python-xyz.scm (python-semver)[arguments]: The substitution
  case for patching virtualenv versioning is no longer requireed.
2019-12-13 06:54:23 -06:00