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Author SHA1 Message Date
Ricardo Wurmus
f9288cdf7c
gnu: r-genomicfeatures: Update to 1.46.3. 
* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.46.3.
 2022-01-06 07:49:41 +01:00
Ricardo Wurmus
4fc0a88a91
gnu: r-chipseeker: Update to 1.30.3. 
* gnu/packages/bioconductor.scm (r-chipseeker): Update to 1.30.3.
 2022-01-06 07:49:41 +01:00
Ricardo Wurmus
9bf3a18fb6
gnu: r-biocparallel: Update to 1.28.3. 
* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.28.3.
 2022-01-06 07:49:40 +01:00
Ricardo Wurmus
ae00bf2d5e
gnu: r-yapsa: Update to 1.20.1. 
* gnu/packages/bioconductor.scm (r-yapsa): Update to 1.20.1.
[propagated-inputs]: Remove r-pmcmr; add r-pmcmrplus.
 2022-01-06 07:49:37 +01:00
Leo Famulari
85f006c8e8
services: Document the full list of available NTP URLs. 
* gnu/services/networking.scm (%ntp-servers): List the URLs granted to us.
 2022-01-06 01:30:27 -05:00
Tobias Geerinckx-Rice
457416bb1b
gnu: godot: Remove input labels. 
* gnu/packages/game-development.scm (godot)[inputs]: Remove input labels.
[arguments]: Tweak accordingly.
 2022-01-06 06:21:31 +01:00
Tobias Geerinckx-Rice
8f90ff4cb8
gnu: godot: Update to 3.4.2. 
* gnu/packages/game-development.scm (godot): Update to 3.4.2.
[arguments]: Don't explicitly return #t from phases.
 2022-01-06 06:21:31 +01:00
Leo Famulari
aebfc1425d
gnu: linux-libre 4.4: Update to 4.4.298. 
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.298.
(linux-libre-4.4-pristine-source): Update hash.
 2022-01-05 23:39:15 -05:00
Leo Famulari
5f12ef9276
gnu: linux-libre 4.9: Update to 4.9.296. 
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.296.
(linux-libre-4.9-pristine-source): Update hash.
 2022-01-05 23:39:15 -05:00
Leo Famulari
d603ef332e
gnu: linux-libre 4.14: Update to 4.14.261. 
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.261.
(linux-libre-4.14-pristine-source): Update hash.
 2022-01-05 23:39:15 -05:00
Leo Famulari
66ea2b6a64
gnu: linux-libre 4.19: Update to 4.19.224. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.224.
(linux-libre-4.19-pristine-source): Update hash.
 2022-01-05 23:39:15 -05:00
Leo Famulari
38b9a0388d
gnu: linux-libre 5.4: Update to 5.4.170. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.170.
(linux-libre-5.4-pristine-source): Update hash.
 2022-01-05 23:39:14 -05:00
Leo Famulari
973403e613
gnu: linux-libre 5.10: Update to 5.10.90. 
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.90.
(linux-libre-5.10-pristine-source): Update hash.
 2022-01-05 23:39:14 -05:00
Leo Famulari
55fd53b0db
gnu: linux-libre: Update to 5.15.13. 
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.13.
(linux-libre-5.15-pristine-source): Update hash.
 2022-01-05 23:39:08 -05:00
Tobias Geerinckx-Rice
b18fb4bf77
gnu: snapraid: Update to 12.0. 
* gnu/packages/backup.scm (snapraid): Update to 12.0.
 2022-01-06 05:24:18 +01:00
Tobias Geerinckx-Rice
70a229aafe
gnu: snapraid: ‘Fix’ build. 
* gnu/packages/backup.scm (snapraid)[arguments]:
Remove "--enable-valgrind" from #:configure-flags.
[native-inputs]: Remove valgrind.
 2022-01-06 05:24:18 +01:00
Tobias Geerinckx-Rice
e3c9860ab9
gnu: snapraid: Use G-expressions. 
* gnu/packages/backup.scm (snapraid)[arguments]:
Rewrite as G-expressions.
 2022-01-06 05:24:18 +01:00
Tobias Geerinckx-Rice
4f488fb545
gnu: wimlib: Update to 1.13.5. 
* gnu/packages/backup.scm (wimlib): Update to 1.13.5.
 2022-01-06 05:24:17 +01:00
Tobias Geerinckx-Rice
38ee3d616d
gnu: borgmatic: Use G-expressions. 
* gnu/packages/backup.scm (borgmatic)[arguments]:
Rewrite as G-expressions.
 2022-01-06 05:24:17 +01:00
Tobias Geerinckx-Rice
2c9bc8408e
gnu: borgmatic: Update to 1.5.22. 
* gnu/packages/backup.scm (borgmatic): Update to 1.5.22.
 2022-01-06 05:24:17 +01:00
Tobias Geerinckx-Rice
1326b36073
gnu: pan: Use G-expressions. 
* gnu/packages/mail.scm (pan)[arguments]:
Rewrite as G-expressions.
 2022-01-06 05:24:17 +01:00
Tobias Geerinckx-Rice
0d78ac083a
gnu: pan: Update to 0.149. 
* gnu/packages/mail.scm (pan): Update to 0.149.
[arguments]: Don't explicitly return #t from phases.
[inputs]: Upgrade gmime-2.6 to gmime.
 2022-01-06 05:24:17 +01:00
Tobias Geerinckx-Rice
f9fe99b4cd
gnu: xxhash: Use G-expressions. 
* gnu/packages/digest.scm (xxhash)[arguments]:
Rewrite as G-expressions.
 2022-01-06 05:24:17 +01:00
Tobias Geerinckx-Rice
7608d2d05d
gnu: xxhash: Update to 0.8.1. 
* gnu/packages/digest.scm (xxhash): Update to 0.8.1.
[arguments]: Add a new 'fix-man-page-links phase.
 2022-01-06 05:24:17 +01:00
Tobias Geerinckx-Rice
24b04f5d4e
gnu: toybox: Use G-expressions. 
* gnu/packages/busybox.scm (toybox)[arguments]:
Rewrite as G-expressions.
 2022-01-06 05:24:17 +01:00
Tobias Geerinckx-Rice
7a96516f60
gnu: toybox: Update to 0.8.6. 
* gnu/packages/busybox.scm (toybox): Update to 0.8.6.
 2022-01-06 05:24:16 +01:00
Tobias Geerinckx-Rice
e2a1419799
gnu: vice: Update to 3.6. 
* gnu/packages/emulators.scm (vice): Update to 3.6.
[arguments]: Add "--disable-html-docs" to #:configure-flags.
 2022-01-06 05:24:16 +01:00
Tobias Geerinckx-Rice
a2ea9ea300
gnu: xchm: Update to 1.33. 
* gnu/packages/ebook.scm (xchm): Update to 1.33.
 2022-01-06 05:24:16 +01:00
Tobias Geerinckx-Rice
0791b10909
gnu: knot-resolver: Update to 5.4.4. 
* gnu/packages/dns.scm (knot-resolver): Update to 5.4.4.
 2022-01-06 05:24:16 +01:00
Maxim Cournoyer
c233b7b422
gnu: cqfd: Update to 5.3.0. 
* gnu/packages/docker.scm (cqfd): Update to 5.3.0.
 2022-01-05 23:02:25 -05:00
Tanguy Le Carrour
c468db2e56
gnu: python-urwidtrees: Build with python-mock. 
This fixes a build failure in the 'sanity-check' phase.

* gnu/packages/python-xyz.scm (python-urwidtrees)[native-inputs]: Add
python-mock.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2022-01-05 18:10:47 -05:00
Sharlatan Hellseher
9765768950
gnu: go-github-com-hashicorp-hcl: Update to 1.0.0. 
* gnu/packages/golang:
  Use the latest tag for HCL V1 instead of commit
  [native-inputs]: add go-github-com-davecgh-go-spew

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-01-05 23:44:20 +01:00
Maxime Devos
bd43300c65
gnu: minetest-unified-inventory: Update to 2021-12-26. 
* gnu/packages/minetest.scm (minetest-unified-inventory): Update to 2021-12-26.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-01-05 23:44:20 +01:00
Maxime Devos
e2ba986b98
gnu: minetest-technic: Update to 2021-09-11. 
* gnu/packages/minetest.scm (minetest-technic): Update to 2021-09-11.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-01-05 23:44:19 +01:00
Maxime Devos
96ba33a869
gnu: minetest-mobs-animal: Update to 2021-11-14. 
* gnu/packages/minetest.scm (minetest-mobs-animal): Update to 2021-11-14.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-01-05 23:44:19 +01:00
Maxime Devos
0c468d5b7f
gnu: minetest-mobs: Update to 2021-12-12. 
* gnu/packages/minetest.scm (minetest-mobs): Update to 2021-12-12.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-01-05 23:44:19 +01:00
Maxime Devos
9d88c4a2a6
gnu: minetest-homedecor-modpack: Update to 2021-12-26. 
* gnu/packages/minetest.scm (minetest-homedecor-modpack): Update to 2021-12-26.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-01-05 23:44:19 +01:00
Maxime Devos
34bc83486d
gnu: minetest-basic-materials: Update to 2021-12-26. 
* gnu/packages/minetest.scm (minetest-basic-materials): Update to 2021-12-26.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-01-05 23:44:19 +01:00
Artyom V. Poptsov
3c86268004
gnu: guile-udev: Update to 0.2.3 
* gnu/packages/guile-xyz.scm (guile-udev): Update to 0.2.3.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-01-05 23:44:19 +01:00
Xinglu Chen
82eb05c398
import: elpa: Also check NonGNU ELPA for updates. 
* guix/import/elpa.scm (latest-release): Determine the repository based
on the URL of the source.
(package-from-gnu.org?): Rename to ...
(elpa-repository): ...this; memoize.
(package-from-elpa-repository?): New procedure.
(%elpa-updater): Adjust accordingly.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-01-05 23:44:18 +01:00
Arjan Adriaanse
d7fb57bcd5
home: import: Fix handling of manifest entries with specific output. 
specification->package fails on manifest entries with specific outputs,
resulting in an invalid home configuration.  This changes the import command
to use specification->package+output instead.

* guix/scripts/home/import.scm (manifest+configuration-files->code): Make sure
manifest entries with specific output are also handled.
* tests/home-import.scm: Specify output in home environment manifest entry.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-01-05 23:44:18 +01:00
Ludovic Courtès
282197b521
gnu: tootle: Remove trailing #t in phases. 
* gnu/packages/mastodon.scm (tootle)[arguments]: Remove trailing #t.
 2022-01-05 23:44:18 +01:00
Ludovic Courtès
f2d304ac98
gnu: tootle: Simplify inputs. 
* gnu/packages/mastodon.scm (tootle)[native-inputs]: Simplify.
 2022-01-05 23:44:18 +01:00
Taiju HIGASHI
b0d25a7118
gnu: tootle: Fix build. 
* gnu/packages/patches/tootle-glib-object-naming.patch,
gnu/packages/patches/tootle-reason-phrase.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/mastodon.scm (tootle)[source]: Use them.
[inputs]: Use LIBSOUP-MINIMAL-2 instead of LIBSOUP.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2022-01-05 23:44:18 +01:00
Ryan Sundberg
bfdeba11f8
linux-container: Handle CLONE_NEWCGROUP and use it by default. 
Adds low-level support for launching Linux containers with cgroup namespaces.

* gnu/build/linux-container.scm (%namespaces): Add 'cgroup.
(namespaces->bit-mask): Handle it.
* guix/build/syscalls.scm (CLONE_NEWCGROUP): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-01-05 23:44:18 +01:00
Tobias Geerinckx-Rice
2c1807c516
gnu: haveged: Update to 1.9.16. 
* gnu/packages/linux.scm (haveged): Update to 1.9.16.
 2022-01-05 23:33:56 +01:00
Tobias Geerinckx-Rice
f16b6fd970
gnu: mdadm: Use G-expressions. 
* gnu/packages/linux.scm (mdadm)[arguments]:
Rewrite as G-expressions.
[inputs]: Move under arguments.  Remove input labels.
 2022-01-05 23:33:56 +01:00
Tobias Geerinckx-Rice
3d7a1b84c5
gnu: mdadm: Update to 4.2. 
* gnu/packages/linux.scm (mdadm): Update to 4.2.
[arguments]: Don't explicitly return #t from phases.
 2022-01-05 23:33:56 +01:00
Ricardo Wurmus
3aa3aea2b0
gnu: Add r-pmcmrplus. 
* gnu/packages/cran.scm (r-pmcmrplus): New variable.
 2022-01-05 23:09:42 +01:00
Ricardo Wurmus
19e0b39361
gnu: Add r-multcompview. 
* gnu/packages/cran.scm (r-multcompview): New variable.
 2022-01-05 23:09:41 +01:00