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Author SHA1 Message Date
Leo Famulari
b1a782b11a
gnu: expat: Update to 2.2.0. 
* gnu/packages/xml.scm (expat): Update to 2.2.0.
[source]: Use 'expat-CVE-2016-0718-fix-regression.patch'. Remove obsolete
patches.
* gnu/packages/patches/expat-CVE-2016-0718-fix-regression.patch: New file.
* gnu/packages/patches/expat-CVE-2012-6702-and-CVE-2016-5300.patch,
gnu/packages/patches/expat-CVE-2015-1283-refix.patch,
gnu/packages/patches/expat-CVE-2016-0718.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Add and remove patches.
 2016-09-13 20:37:33 -04:00
Leo Famulari
883d0a7d25
gnu: openblas: Update to 0.2.19. 
* gnu/packages/maths.scm (openblas): Update to 0.2.19.
 2016-09-13 00:50:13 -04:00
Ludovic Courtès
5c9632c75a
build-system/gnu: Do not patch symlinks in the source. 
This is a followup to 13a9feb5b64fd819eaed38a17da0284bbe2b8d9.

* guix/build/gnu-build-system.scm (patch-source-shebangs): Remove call
to 'remove'.  Pass a second argument to 'find-files' to filter out
symlinks; pass #:stat lstat.
(patch-generated-file-shebangs): Likewise, and also filter out
non-executable files.
 2016-09-12 21:51:25 +02:00
Ludovic Courtès
e7e43727ce
gnu: gcc: Work around ARM bootstrapping failure (GCC bug #71399). 
* gnu/packages/patches/gcc-arm-bug-71399.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gcc.scm (gcc-4.9)[source]: Use it.
 2016-09-12 18:20:50 +02:00
Leo Famulari
24f2334e36
gnu: libjpeg: Update to 9b. 
* gnu/packages/image.scm (libjpeg): Update to 9b.
 2016-09-11 13:04:52 -04:00
Leo Famulari
a2f3c614f4
gnu: libpng: Update to 1.6.25. 
* gnu/packages/image.scm (libpng): Update to 1.6.25.
 2016-09-11 13:04:52 -04:00
Leo Famulari
ce0b822e05
gnu: gnutls: Update to 3.5.4. 
* gnu/packages/tls.scm (gnutls): Update to 3.5.4.
 2016-09-11 11:32:00 -04:00
Ben J Woodcroft
912c7a840a
gnu: r: Update to 3.3.1. 
* gnu/packages/statistics.scm (r): Update to 3.3.1.
 2016-09-09 21:54:41 +10:00
Ben J Woodcroft
71e98ca571
gnu: r: Add openblas input. 
* gnu/packages/statistics.scm (r)[inputs]: Add openblas.
[arguments]: Adapt configure flags.
 2016-09-09 21:54:20 +10:00
David Craven
b450d2b440
gnu: linux-libre-headers: Use modify-phases. 
* gnu/packages/linux.scm (linux-libre-headers): Use modify phases.
 2016-09-09 13:20:22 +02:00
Ludovic Courtès
b14a838509
utils: 'wrap-program' produces only one wrapper file. 
* guix/build/utils.scm (wrap-program)[wrapper-file-name]
[next-wrapper-number, wrapper-target]: Remove.
[wrapped-file, already-wrapped?]: New variables.
[last-line]: New procedure.
Use it to append to PROG when a wrapper already exists.
* tests/build-utils.scm ("wrap-program, one input, multiple calls"):
Adjust the list of files to delete.
 2016-09-07 23:59:02 +02:00
Leo Famulari
5c838ec9cd
gnu: openssl: Delete leftover man3 directory. 
* gnu/packages/tls.scm (openssl)[arguments]: Delete empty directory in
'move-man3-pages' phase.
 2016-09-06 13:43:11 -04:00
Ludovic Courtès
2c6a1c67e4
gnu: eudev: Update to 3.2. 
* gnu/packages/linux.scm (eudev): Update to 3.2.
 2016-09-03 23:45:29 +02:00
Ludovic Courtès
241826b5ab
gnu: procps: Disable faulty floating point test. 
* gnu/packages/linux.scm (procps)[arguments]: Add 'disable-strtod-test'
phase.
 2016-09-02 23:49:47 +02:00
Leo Famulari
075be8dbe0
Merge branch 'master' into core-updates 2016-09-02 09:54:40 -04:00
Leo Famulari
d058708e86
gnu: libidn: Replace with 1.33 [fixes CVE-2015-8948 and CVE-2016-{6261,6263}]. 
* gnu/packages/libidn.scm (libidn)[replacement]: New field.
(libidn-1.33): New variable.
 2016-09-02 09:52:56 -04:00
Ludovic Courtès
072e10615f
Merge branch 'master' into core-updates 2016-09-02 15:39:50 +02:00
Ludovic Courtès
3964e358ab
gnu: gawk: Use 'modify-phases'. 
* gnu/packages/gawk.scm (gawk)[arguments]: Use 'modify-phases'.
 2016-09-02 15:39:10 +02:00
Ludovic Courtès
e0649ff3c0
gnu: gawk: Update to 4.1.4. 
* gnu/packages/gawk.scm (gawk): Update to 4.1.4.
[source]: Remove 'patches'.
[arguments]: Add 'adjust-test-infrastructure' phase.
* gnu/packages/patches/gawk-fts-test.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
 2016-09-02 15:39:10 +02:00
Ludovic Courtès
67fcf2358c
gnu: glibc: Update to 2.24. 
* gnu/packages/base.scm (glibc/linux): Update to 2.24.
 2016-09-02 15:39:10 +02:00
Ludovic Courtès
7370c02148
tests: Test 'wrap-program' without building a package. 
* tests/build-utils.scm (%store): Remove.
("wrap-program, one input, multiple calls"): Rewrite without resorting
to packages and derivations.
 2016-09-02 15:39:10 +02:00
Efraim Flashner
c4c8cfddd5
gnu: Remove ghostscript-gs definitions. 
* gnu/packages/ghostscript.scm (ghostscript-wrapper, ghostscript-gs)
(ghostscript-gs/x): Remove variables.
 2016-09-02 14:37:13 +03:00
Efraim Flashner
fb0b9ff1fa
gnu: Use ghostscript over ghostscript-gs. 
* gnu/packages/engineering.scm (fastcap)[native-inputs],
gnu/packages/lout.scm (lout)[native-inputs],
gnu/packages/ocaml.scm (unison)[native-inputs],
gnu/packages/plotutils.scm (asymptote)[native-inputs],
gnu/packages/skribilo.scm (skribilo)[native-inputs]: Remove
ghostscript-gs.
* gnu/packages/gv.scm (gv)[propagated-inputs],
gnu/packages/music.scm (lilypond)[inputs],
gnu/packages/scheme.scm (chez-scheme)[native-inputs]: Use
ghostscript over ghostscript-gs.
 2016-09-02 14:35:40 +03:00
Efraim Flashner
fa68a9bbe9
gnu: ghostscript: Add `gs' binary. 
This is a followup to commit eb354bdacb.

* gnu/packages/ghostscript.scm (ghostscript)[arguments]: Create a
symlink from `gsc' to `gs' to provide a `gs' binary.
 2016-09-02 13:08:25 +03:00
Efraim Flashner
135ba811c6
gnu: python2-ipython: Use strip-python2-variant. 
* gnu/packages/python.scm (python2-ipython): Inherit using
strip-python2-variant.
[propagated-inputs]: Remove work-around for python2-terminado.
[inputs]: Remove work-around for python2-jsonschema, python2-matplotlib,
python2-numpy, python2-requests.
(python-inputs)[properties]: New field.
 2016-09-02 06:44:37 +03:00
Efraim Flashner
fc1a170e65
gnu: python2-numexpr: Use strip-python2-variant. 
* gnu/packages/python.scm (python2-numexpr): Replace package definition
with 'package-with-python2', using 'strip-python2-variant'.
 2016-09-02 06:44:36 +03:00
Efraim Flashner
2b031d3fc1
gnu: python2-scikit-image: Use strip-python2-variant. 
* gnu/packages/python.scm (python2-scikit-image): Inherit using
strip-python2-variant.
[propagated-inputs]: Remove work-around for python2-matplotlib,
python2-numpy, python2-scipy.
 2016-09-02 06:44:36 +03:00
Efraim Flashner
7e21b9fb26
gnu: python-scikit-learn: Set source file name. 
* gnu/packages/python.scm (python-scikit-learn)[source]: Add 'file-name'
field.
 2016-09-02 06:44:36 +03:00
Efraim Flashner
25a2f81f9b
gnu: python2-scikit-learn: Use strip-python2-variant. 
* gnu/packages/python.scm (python2-scikit-learn): Replace package
definition with 'package-with-python2', using 'strip-python2-variant'
to simplify the package definition.
 2016-09-02 06:44:35 +03:00
Efraim Flashner
d44a618384
gnu: python-requests-mock: Update to 1.0.0. 
* gnu/packages/openstack.scm (python-requests-mock): Update to 1.0.0.
[inputs]: Remove python-setuptools. Move python-mock ...
[native-inputs]: ... to here.  Add python-discover, python-fixtures,
python-sphinx, python-testrepostory, python-testtools.
[properties]: Add python2-variant.
(python2-requests-mock): inherit stripped variant.
[native-inputs]: Use python2-setuptools.
 2016-09-02 06:44:25 +03:00
Mark H Weaver
bb76ef9d8b
Revert "gnu: gsl: Update to 2.2." 
This reverts commit b16b16e6c2.

Rationale: gsl-2.2 consistently fails its test suite on i686.  Inkscape
depends on gsl, and the grub background image is converted using
inkscape, so i686 systems can no longer be built.
 2016-09-01 20:17:01 -04:00
Danny Milosavljevic
f63e5eaaeb
gnu: dtc: Add missing symbols patch from debian. 
* gnu/packages/u-boot.scm (dtc)[source]: Add patch.
* gnu/packages/patches/dtc-add-missing-symbols-to-lds.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: David Craven <david@craven.ch>
 2016-09-02 00:16:34 +02:00
Ludovic Courtès
ff43e353a1
build-system/gnu: 'strip' phase lists files in sorted order. 
This fixes a bug whereby the choice between stripping 'libfoo.so.0.1.2'
and stripping 'libfoo.so' (the symlink) would be non-deterministic.

* guix/build/gnu-build-system.scm (strip)[strip-dir]: Use 'find-files'
instead of 'file-system-fold' so that files are picked in deterministic
order.
 2016-09-01 23:48:08 +02:00
Ludovic Courtès
4e49163f76
guix build: Rewrite '--with-input' in terms of 'package-input-rewriting'. 
* guix/scripts/build.scm (transform-package-inputs): Rewrite in terms of
'package-input-rewriting'.
 2016-09-01 23:07:54 +02:00
Ludovic Courtès
2a75b0b63d
packages: Add 'package-input-rewriting'. 
* guix/packages.scm (package-input-rewriting): New procedure.
* tests/packages.scm ("package-input-rewriting"): New test.
* doc/guix.texi (Defining Packages): Document it.
(Package Transformation Options): Add cross-reference.
 2016-09-01 23:07:54 +02:00
David Craven
73dc727ec8
gnu: sqlite: Enable DBSTAT_VTAB. 
* gnu/packages/databases.scm (sqlite)[arguments]: Enable configure-flag
  -DSQLITE_ENABLE_DBSTAT_VTAB.
 2016-09-01 23:00:08 +02:00
John Darrington
705b971477
gnu: Fix typo in description of xfce-desktop-service. 
* gnu/services/desktop.scm (xfce-desktop-service) abilit --> ability.
 2016-09-01 17:55:49 +02:00
John Darrington
7e348e6c0d
gnu: Add rpcbind 
* gnu/packages/onc-rpc.scm (rpcbind): New variable.
 2016-09-01 17:55:39 +02:00
Kei Kebreau
261b3da532
gnu: Add telepathy-mission-control. 
* gnu/packages/freedesktop.scm (telepathy-mission-control): New variable.
 2016-09-01 11:24:51 -04:00
Danny Milosavljevic
71d4676069
gnu: Add u-boot. 
* gnu/packages/u-boot.scm (u-boot, make-u-boot-package,
  u-boot-vexpress_ca9x4, u-boot-malta): New variables.

Co-authored-by: David Craven <david@craven.ch>
 2016-09-01 17:17:42 +02:00
Danny Milosavljevic
d62ed73239
gnu: Add dtc. 
* gnu/packages/u-boot.scm (dtc): New variable.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add file.

Co-authored-by: David Craven <david@craven.ch>
 2016-09-01 17:17:42 +02:00
Vincent Legoll
e5cd149f68
Update 'TODO'. 
* TODO: Remove items about guix challenge & guix publish.

Signed-off-by: Vincent Legoll <vincent.legoll@gmail.com>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-09-01 14:57:03 +02:00
Ludovic Courtès
38c2b50354
Reinstate "services: elogind: Provide '%elogind-file-systems' by extension." 
This reverts commit 17073dafc5.
 2016-09-01 14:57:03 +02:00
Marius Bakke
5fd66a37d5
gnu: slim: Move to display-managers.scm. 
* gnu/packages/display-managers.scm: New file.
* gnu/packages/slim.scm: Delete file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
* gnu/services/xorg.scm: Likewise.
 2016-09-01 14:36:49 +02:00
Efraim Flashner
7060b28171
tests: hackage: Fix mock urls. 
Followup to 18f7473504.

* tests/hackage.scm (hackage->guix-package): Use 'https' in mock urls.
 2016-09-01 13:40:49 +03:00
Mark H Weaver
307347fe1b
gnu: Fix typo in copyright notice in (gnu packages networking). 
* gnu/packages/networking.scm: "Coypright" --> "Copyright".
 2016-09-01 04:27:08 -04:00
Leo Famulari
7335ca1d71
gnu: icedtea-6: Update to 1.13.12 [security fixes]. 
Fixes CVE-2016-{3458,3485,3500,3508,3550,3606}.

* gnu/packages/java.scm (icedtea-6): Update to 1.13.12.
[source]: Remove 'icedtea-remove-overrides' patch.
[arguments]: Move ALSA header substitution to 'patch-paths' phase.
* gnu/packages/patches/icedtea-remove-overrides.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-08-31 19:04:46 -04:00
Leo Famulari
be4a1ddec5
Revert "gnu: linux-pam: Add cracklib to inputs." 
This reverts commit 25d1b3107f.
 2016-08-31 16:16:22 -04:00
Marius Bakke
68c35ba96e
gnu: rofi: Update to 1.2.0. 
* gnu/packages/xdisorg.scm (rofi): Update to 1.2.0.
  [inputs]: Drop libx11 and add xcb-util-xrm.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-08-31 15:12:29 -04:00
Marius Bakke
4493a3c2ef
gnu: Add xcb-util-xrm. 
* gnu/packages/xdisorg.scm (xcb-util-xrm): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-08-31 15:12:25 -04:00