Roel Janssen
|
bd4a0bab5f
|
gnu: r-category: Update to 2.42.1.
* gnu/packages/bioinformatics.scm (r-category): Update to 2.42.1.
|
2017-08-02 00:32:46 +02:00 |
|
Roel Janssen
|
0ff478344b
|
gnu: r-biocstyle: Update to 2.4.1.
* gnu/packages/bioinformatics.scm (r-biocstyle): Update to 2.4.1.
|
2017-08-02 00:32:31 +02:00 |
|
Roel Janssen
|
9c4348d8c4
|
gnu: r-dnacopy: Update to 1.50.1.
* gnu/packages/bioinformatics.scm (r-dnacopy): Update to 1.50.1.
|
2017-08-02 00:32:11 +02:00 |
|
Roel Janssen
|
3ec25eb2a8
|
gnu: r-iranges: Update to 2.10.2.
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.10.2.
|
2017-08-02 00:31:46 +02:00 |
|
Roel Janssen
|
6252dd0f15
|
gnu: r-genomeinfodb: Update to 1.12.2.
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.12.2.
|
2017-08-02 00:31:28 +02:00 |
|
Roel Janssen
|
48f5d283b2
|
gnu: r-variantannotation: Update to 1.22.3.
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.22.3.
|
2017-08-02 00:31:08 +02:00 |
|
Roel Janssen
|
1b4738e23c
|
gnu: r-limma: Update to 3.32.5.
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.32.5.
|
2017-08-02 00:30:49 +02:00 |
|
Roel Janssen
|
1898a7832f
|
gnu: r-biobase: Update to 2.36.2.
* gnu/packages/bioinformatics.scm (r-biobase): Update to 2.36.2.
|
2017-08-02 00:30:27 +02:00 |
|
Roel Janssen
|
62eb93a7d0
|
gnu: r-annotationdbi: Update to 1.38.2.
* gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.38.2.
|
2017-08-02 00:28:32 +02:00 |
|
Roel Janssen
|
0c6494a1db
|
gnu: r-biomart: Update to 2.32.1.
* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.32.1.
|
2017-08-02 00:28:16 +02:00 |
|
Roel Janssen
|
1ff74d074e
|
gnu: r-biocparallel: Update to 1.10.1.
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.10.1.
|
2017-08-02 00:27:57 +02:00 |
|
Roel Janssen
|
5077bc3e2e
|
gnu: r-biostrings: Update to 2.44.2.
* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.44.2.
|
2017-08-02 00:27:35 +02:00 |
|
Roel Janssen
|
adf5d0a0bc
|
gnu: r-delayedarray: Update to 0.2.7.
* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.2.7.
|
2017-08-02 00:27:16 +02:00 |
|
Roel Janssen
|
f41150f13d
|
gnu: r-summarizedexperiment: Update to 1.6.3.
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.6.3.
|
2017-08-02 00:26:55 +02:00 |
|
Roel Janssen
|
26760c80cd
|
gnu: r-genomicalignments: Update to 1.12.1.
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.12.1.
|
2017-08-02 00:26:33 +02:00 |
|
Roel Janssen
|
15afa9bf8f
|
gnu: r-rtracklayer: Update to 1.36.4.
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.36.4.
|
2017-08-02 00:26:00 +02:00 |
|
Roel Janssen
|
8cfaa9ab4e
|
gnu: r-genomicfeatures: Update to 1.28.4.
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.28.4.
|
2017-08-02 00:25:26 +02:00 |
|
Roel Janssen
|
9eb2714625
|
gnu: r-copywriter: Update to 2.8.1.
* gnu/packages/bioinformatics.scm (r-copywriter): Update to 2.8.1.
|
2017-08-02 00:25:00 +02:00 |
|
Roel Janssen
|
bfa0d1e773
|
gnu: r-sva: Update to 3.24.4.
* gnu/packages/bioinformatics.scm (r-sva): Update to 3.24.4.
|
2017-08-02 00:24:27 +02:00 |
|
Roel Janssen
|
8060a61798
|
gnu: r-rsqlite: Update to 2.0.
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.0.
|
2017-08-02 00:23:16 +02:00 |
|
Roel Janssen
|
796237a9a4
|
gnu: Add r-blob.
* gnu/packages/statistics.scm (r-blob): New variable.
|
2017-08-02 00:22:33 +02:00 |
|
Roel Janssen
|
aa184803f8
|
gnu: Add r-pkgconfig.
* gnu/packages/statistics.scm (r-pkgconfig): New variable.
|
2017-08-02 00:21:40 +02:00 |
|
Marius Bakke
|
fc8f0631b4
|
gnu: re2: Update to 2017-08-01.
* gnu/packages/regex.scm (re2): Update to 2017-08-01.
|
2017-08-01 23:37:20 +02:00 |
|
Marius Bakke
|
1926fd2baa
|
gnu: maim: Update to 5.4.66.
* gnu/packages/xdisorg.scm (maim): Update to 5.4.66.
|
2017-08-01 23:35:31 +02:00 |
|
Marius Bakke
|
7d960db1e3
|
gnu: slop: Update to 7.3.48.
* gnu/packages/xdisorg.scm (slop): Update to 7.3.48.
|
2017-08-01 23:35:03 +02:00 |
|
Marius Bakke
|
b73e49f595
|
gnu: git: Update to 2.13.4.
* gnu/packages/version-control.scm (git): Update to 2.13.4.
|
2017-08-01 23:34:41 +02:00 |
|
Roel Janssen
|
14fce399cc
|
gnu: r-foreign: Update hash after upstream tarball change.
* gnu/packages/statistics.scm (r-foreign): Update hash. The only difference
in the tarball is the metadata. The contents are identical.
|
2017-08-01 23:07:58 +02:00 |
|
Roel Janssen
|
cdf124c607
|
gnu: r-foreign: Remove duplicate recipe.
* gnu/packages/statistics.scm (r-foreign): Remove duplicate recipe.
|
2017-08-01 23:06:02 +02:00 |
|
Leo Famulari
|
d0386db493
|
gnu: rapidjson: Update to 1.1.0.
* gnu/packages/web.scm (rapidjson): Update to 1.1.0.
[source]: Remove snippet.
|
2017-08-01 14:42:44 -04:00 |
|
ng0
|
f2e1271809
|
gnu: Add pidentd.
* gnu/packages/networking.scm (pidentd): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
|
2017-08-01 20:57:51 +03:00 |
|
Kei Kebreau
|
89c9445aa2
|
gnu: hyperrogue: Update to 10.0e.
* gnu/packages/games.scm (hyperrogue): Update to 10.0e.
[arguments]: Adjust accordingly.
|
2017-08-01 12:14:54 -04:00 |
|
Efraim Flashner
|
d931a4bbeb
|
gnu: metabat: Limit to x86_64 and i686 only.
* gnu/packages/bioinformatics.scm (metabat)[supported-systems]: New field.
|
2017-08-01 17:28:35 +03:00 |
|
Kyle Meyer
|
4bfdf034e2
|
gnu: Add emacs-yasnippet-snippets.
* gnu/packages/emacs.scm (emacs-yasnippet-snippets): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
|
2017-08-01 15:33:07 +02:00 |
|
Kyle Meyer
|
1f0d47059d
|
gnu: emacs-yasnippet: Upgrade to 0.12.0.
* gnu/packages/emacs.scm (emacs-yasnippet): Upgrade to 0.12.0.
[source]: Remove an uninstalled directory from yas-snippet-dirs.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
|
2017-08-01 15:32:59 +02:00 |
|
Ludovic Courtès
|
04b6d6f7f7
|
gnu: guile-ssh: Update to 0.11.2.
* gnu/packages/ssh.scm (guile-ssh): Update to 0.11.2.
[source]: Remove 'patches', 'modules', and 'snippet'.
* gnu/packages/patches/guile-ssh-channel-finalization.patch,
gnu/packages/patches/guile-ssh-double-free.patch,
gnu/packages/patches/guile-ssh-rexec-bug.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Remove them.
|
2017-08-01 15:32:07 +02:00 |
|
Adonay Felipe Nogueira
|
12235a124f
|
gnu: artanis: Unbundled guile-json and version according to documentation.
* gnu/packages/guile.scm (artanis): Unbundled guile-json and version
according to documentation.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
|
2017-08-01 15:32:07 +02:00 |
|
Muriithi Frederick Muriuki
|
269504a797
|
gnu: python-pbr-minimal: Update to 3.0.1
* gnu/packages/python.scm (python-pbr-minimal): Update to 3.0.1
[source]: Update hash and remove patch.
* gnu/packages/patches/python-pbr-fix-man-page-support.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
|
2017-08-01 15:21:52 +03:00 |
|
Leo Famulari
|
3d0fbd3c2f
|
gnu: libgit2: Enable SHA-1 collision detection.
* gnu/packages/version-control.scm (libgit2)[arguments]: Enable '-DUSE_SHA1DC'
in #:configure-flags.
|
2017-08-01 01:02:53 -04:00 |
|
Ben Woodcroft
|
befb2c0e6e
|
gnu: ruby-bio-commandeer: Update to 0.2.0.
* gnu/packages/ruby.scm (ruby-bio-commandeer): Update to 0.2.0.
|
2017-08-01 14:09:07 +10:00 |
|
Ludovic Courtès
|
e1ecc8908e
|
gnu: libmicrohttpd: Update to 0.9.55.
* gnu/packages/gnunet.scm (libmicrohttpd): Update to 0.9.55.
[arguments]: Add 'add-missing-LDFLAGS' phase.
|
2017-07-31 22:51:34 +02:00 |
|
Ludovic Courtès
|
a6b5af0cff
|
gnu: xf86-video-intel: Update snapshot.
* gnu/packages/xorg.scm (xf86-video-intel): Update to 2100efa.
Introduce 'revision' variable.
|
2017-07-31 22:10:34 +02:00 |
|
Ludovic Courtès
|
f0732ee485
|
gnu: guile-bytestructures: Install .go files to lib/guile/X.Y.
* gnu/packages/guile.scm (guile-bytestructures)[arguments]: Install .go
files to OBJECT-DIR, defined as OUT/lib/guile/X.Y/site-ccache.
|
2017-07-31 17:36:24 +02:00 |
|
ng0
|
54727850c3
|
gnu: tor: Remove '--enable-expensive-hardening' option.
* gnu/packages/tor.scm (tor)[arguments]: Remove '--enable-expensive-hardening' option.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
|
2017-07-31 17:06:45 +02:00 |
|
Peter Mikkelsen
|
ee217402f7
|
gnu: erlang: Update to 20.0.
* gnu/packages/erlang.scm (erlang): Update to 20.0.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
|
2017-07-31 17:02:36 +02:00 |
|
Ludovic Courtès
|
c27e02bf6b
|
gnu: network-manager: Add dependency on Newt.
Suggested by Mark H Weaver.
* gnu/packages/gnome.scm (network-manager)[inputs]: Add NEWT.
|
2017-07-31 15:23:06 +02:00 |
|
Ludovic Courtès
|
44b0faee6b
|
gnu: guile-git: Skip faulty tests on non-x86_64.
Reported by Mark H Weaver.
* gnu/packages/guile.scm (guile-git)[arguments]: Add 'skip-tests' phase
unless on x86_64-linux.
|
2017-07-31 15:23:06 +02:00 |
|
Ludovic Courtès
|
8ecba89b77
|
gnu: libgit2: Add "debug" output.
* gnu/packages/version-control.scm (libgit2)[outputs]: New field.
|
2017-07-31 15:23:06 +02:00 |
|
Ludovic Courtès
|
58dce7bfb5
|
gnu: libgit2: Update to 0.26.0.
* gnu/packages/version-control.scm (libgit2): Update to 0.26.0. Remove
"libgit2-use-after-free.patch".
* gnu/packages/patches/libgit2-use-after-free.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Remove it.
|
2017-07-31 15:23:05 +02:00 |
|
Efraim Flashner
|
6ce8fe4cd0
|
gnu: efl: Add wayland support.
* gnu/packages/enlightenment.scm (efl)[inputs]: Add wayland-protocols.
Move mesa ...
[propagated-inputs]: ... to here. Add libinput, libxkbcommon, wayland.
[arguments]: Add flags to enable wayland, elput and drm.
|
2017-07-31 15:16:23 +03:00 |
|
Efraim Flashner
|
0d3ecf77ba
|
gnu: gst-plugins-good: Update disable-failing-tests phase.
* gnu/packages/gstreamer.scm (gst-plugins-good)[arguments]: Change the
list of tests to disable during 'disable-failing-tests phase.
|
2017-07-31 15:16:21 +03:00 |
|