Since c29bb909d2, fakeroot "sed" and "coreutils"
dependencies are now explicit.
* gnu/system/image.scm (system-disk-image): Remove "sed" and "coreutils" from
inputs.
* gnu/packages/linux.scm (fakeroot)[inputs]: Add "sed" and "coreutils",
[arguments]: substitute "sed" and "cut" by their absolute path in fakeroot
script. Rename the associated phase from patch-getopt to patch-script.
The guix-translated-texinfo.drv execution time goes from 1mn42s with 1
core to 1mn8s with 4 cores.
* guix/self.scm (translate-texi-manuals)[build]: Use 'n-par-for-each'
instead of 'for-each' for translation.
This reduces the execution time of:
(call-with-input-file "po/doc/guix-manual.de.po" read-po-file)
from 4.7s to 4.0s.
* guix/build/po.scm (interpret-newline-escape): New procedure.
(parse-tree->assoc): Use it instead of 'regexp-substitute/global'.
Building guix-translated-texinfo.drv goes from 11mn to 1mn50s, most of
which is taken by po4a.
* guix/self.scm (translate-texi-manuals)[build](make-ref-regex): Remove.
(canonicalize-whitespace): New procedure.
(xref-regexp): New variable.
(translate-cross-references): Rewrite to iterate over the
cross-references rather than iterating over the msgids. Update caller.
* gnu/packages/mate.scm (mate)[propagated-inputs]: Remove as the
proper fix arrived from core-updates.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
The "image-root" derivation output is used as a temporary directory that is
passed to mke2fs and mkdosfs later on. By merging the creation of this
directory and the production of partition images, we can get rid of the
derivation.
As mke2fs and mkdosfs are not able to override file permissions, call those
commands with fakeroot. This way, all the image files will be owned by root,
even if image generation is done in an unprivilegded context.
* gnu/system/image.scm (system-disk-image): Merge "image-root" and
"iso9660-image" derivations so that we spare an extra derivation. Also add
"fakeroot" and its runtime dependencies to the inputs.
* gnu/build/image.scm (make-ext-image, make-vfat-image): Make sure that mke2fs
and mkdosfs are respectively called by fakeroot.
Fixes <https://bugs.gnu.org/41987>.
Reported by Jonathan Brielmaier <jonathan.brielmaier@web.de>.
* gnu/packages/video.scm (ffmpeg-4.2): New public variable.
* gnu/packages/chromium.scm (ungoogled-chromium)[inputs]: Change from FFMPEG
to FFMPEG-4.2.
The "image-root" derivation output is used as a temporary directory that is
passed to GNU Xorriso later on. By merging the creation of this directory and
the production of an ISO image, we can get rid of the derivation.
* gnu/system/image.scm (system-iso9660-image): Merge "image-root" and
"iso9660-image" derivations so that we spare an extra derivation.
But keep version 2.4.1 around for packages that still need it and for python2
support.
* gnu/packages/graph.scm (python-plotly): Update to 4.8.1.
[source]: Use git-fetch so that tests are also included.
[arguments]: Enable tests.
[home-page]: Follow redirect.
(python-plotly-2.4.1): New variable.
(python2-plotly): Inherit from python-plotly-2.4.1.
* gnu/packages/bioinformatics.scm (python-deeptools)[native-inputs]: Depend on
python-plotly-2.4.1.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
But also keep version 0.25.3 around for packages requiring an earlier
versions, as well as version 0.24.2 for a version with python2.
* gnu/packages/python-science.scm (python-pandas): Update to 1.0.5.
[arguments]: Adapt 'patch-which phase. Add new 'prepare-x phase. Do not
delete tests that depend on "moto", they are skipped automatically.
[propagated-inputs]: Add python-jinja2.
[inputs]: Add xsel and xclip.
[native-inputs]: Add xorg-server-for-tests so we can test clipboard support.
(python-pandas-0.24): New variable.
(python2-pandas): Inherit from python-pandas-0.25.
* gnu/packages/bioinformatics.scm (python-biom-format)[propagated-inputs]:
Switch to python-pandas-0.25.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
And make sure python-deeptools's tests are running.
* gnu/packages/bioinformatics.scm (python-deeptools): Fetch source using git.
[native-inputs]: Add python-mock and python-nose.
(deeptools): Mark as deprecated.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
