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Author SHA1 Message Date
Ricardo Wurmus
255d1bbe77
gnu: Move dbm databases to new module. 
* gnu/packages/databases.scm (gdbm, bdb, bdb-5.3): Move from here...
* gnu/packages/dbm.scm: ...to this new module.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/audio.scm,
gnu/packages/avahi.scm,
gnu/packages/backup.scm,
gnu/packages/cobol.scm,
gnu/packages/cyrus-sasl.scm,
gnu/packages/databases.scm,
gnu/packages/finance.scm,
gnu/packages/game-development.scm,
gnu/packages/gnome.scm,
gnu/packages/guile.scm,
gnu/packages/ibus.scm,
gnu/packages/kerberos.scm,
gnu/packages/linux.scm,
gnu/packages/mail.scm,
gnu/packages/man.scm,
gnu/packages/nvi.scm,
gnu/packages/openldap.scm,
gnu/packages/package-management.scm,
gnu/packages/php.scm,
gnu/packages/pulseaudio.scm,
gnu/packages/python.scm,
gnu/packages/rdf.scm,
gnu/packages/ruby.scm,
gnu/packages/sawfish.scm: Update module references.
 2019-01-16 16:08:22 +01:00
Ricardo Wurmus
cd0322a3ef
gnu: Move sqlite to separate module. 
* gnu/packages/databases.scm (sqlite, sqlite-3.26.0, sqlite-with-fts5,
sqlite-with-column-metadata): Move variables from here...
* gnu/packages/sqlite.scm: ...to this new module.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/apl.scm,
gnu/packages/bittorrent.scm,
gnu/packages/calendar.scm,
gnu/packages/code.scm,
gnu/packages/crypto.scm,
gnu/packages/databases.scm,
gnu/packages/dc.scm,
gnu/packages/disk.scm,
gnu/packages/ebook.scm,
gnu/packages/education.scm,
gnu/packages/emacs.scm,
gnu/packages/emulators.scm,
gnu/packages/file-systems.scm,
gnu/packages/freedesktop.scm,
gnu/packages/ftp.scm,
gnu/packages/games.scm,
gnu/packages/geo.scm,
gnu/packages/gnome.scm,
gnu/packages/gnunet.scm,
gnu/packages/gnupg.scm,
gnu/packages/gnuzilla.scm,
gnu/packages/gps.scm,
gnu/packages/guile.scm,
gnu/packages/ibus.scm,
gnu/packages/kerberos.scm,
gnu/packages/kodi.scm,
gnu/packages/lisp.scm,
gnu/packages/mail.scm,
gnu/packages/messaging.scm,
gnu/packages/mpd.scm,
gnu/packages/music.scm,
gnu/packages/networking.scm,
gnu/packages/nfs.scm,
gnu/packages/ocaml.scm,
gnu/packages/package-management.scm,
gnu/packages/pdf.scm,
gnu/packages/photo.scm,
gnu/packages/php.scm,
gnu/packages/python.scm,
gnu/packages/qt.scm,
gnu/packages/ruby.scm,
gnu/packages/scheme.scm,
gnu/packages/sync.scm,
gnu/packages/syndication.scm,
gnu/packages/version-control.scm,
gnu/packages/video.scm,
gnu/packages/web-browsers.scm,
gnu/packages/webkit.scm: Adjust module references.
 2019-01-16 16:08:22 +01:00
Ricardo Wurmus
44d10b1f72
gnu: Separate Python core packages from the rest. 
* gnu/packages/python.scm: Move hundreds of package definitions from here...
* gnu/packages/python-xyz.scm: ...to this new module.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/ada.scm,
gnu/packages/admin.scm,
gnu/packages/android.scm,
gnu/packages/audio.scm,
gnu/packages/backup.scm,
gnu/packages/benchmark.scm,
gnu/packages/bioinformatics.scm,
gnu/packages/bittorrent.scm,
gnu/packages/calendar.scm,
gnu/packages/check.scm,
gnu/packages/chemistry.scm,
gnu/packages/cluster.scm,
gnu/packages/compression.scm,
gnu/packages/connman.scm,
gnu/packages/crypto.scm,
gnu/packages/cups.scm,
gnu/packages/databases.scm,
gnu/packages/dav.scm,
gnu/packages/direct-connect.scm,
gnu/packages/disk.scm,
gnu/packages/django.scm,
gnu/packages/dlang.scm,
gnu/packages/docker.scm,
gnu/packages/ebook.scm,
gnu/packages/elf.scm,
gnu/packages/emacs.scm,
gnu/packages/emulators.scm,
gnu/packages/engineering.scm,
gnu/packages/enlightenment.scm,
gnu/packages/finance.scm,
gnu/packages/fltk.scm,
gnu/packages/fontutils.scm,
gnu/packages/freedesktop.scm,
gnu/packages/game-development.scm,
gnu/packages/games.scm,
gnu/packages/geo.scm,
gnu/packages/gl.scm,
gnu/packages/glib.scm,
gnu/packages/gnome.scm,
gnu/packages/gnupg.scm,
gnu/packages/gnuzilla.scm,
gnu/packages/graph.scm,
gnu/packages/graphics.scm,
gnu/packages/graphviz.scm,
gnu/packages/gtk.scm,
gnu/packages/ham-radio.scm,
gnu/packages/image-processing.scm,
gnu/packages/image-viewers.scm,
gnu/packages/image.scm,
gnu/packages/irc.scm,
gnu/packages/jrnl.scm,
gnu/packages/julia.scm,
gnu/packages/kde-frameworks.scm,
gnu/packages/key-mon.scm,
gnu/packages/libffi.scm,
gnu/packages/libreoffice.scm,
gnu/packages/libusb.scm,
gnu/packages/lirc.scm,
gnu/packages/logging.scm,
gnu/packages/machine-learning.scm,
gnu/packages/mail.scm,
gnu/packages/mate.scm,
gnu/packages/maths.scm,
gnu/packages/medical.scm,
gnu/packages/messaging.scm,
gnu/packages/monitoring.scm,
gnu/packages/mp3.scm,
gnu/packages/mpd.scm,
gnu/packages/music.scm,
gnu/packages/networking.scm,
gnu/packages/nutrition.scm,
gnu/packages/openldap.scm,
gnu/packages/openstack.scm,
gnu/packages/package-management.scm,
gnu/packages/password-utils.scm,
gnu/packages/patchutils.scm,
gnu/packages/pdf.scm,
gnu/packages/photo.scm,
gnu/packages/polkit.scm,
gnu/packages/protobuf.scm,
gnu/packages/python-crypto.scm,
gnu/packages/python-web.scm,
gnu/packages/qt.scm,
gnu/packages/rdf.scm,
gnu/packages/ruby.scm,
gnu/packages/search.scm,
gnu/packages/selinux.scm,
gnu/packages/serialization.scm,
gnu/packages/shells.scm,
gnu/packages/simulation.scm,
gnu/packages/ssh.scm,
gnu/packages/statistics.scm,
gnu/packages/storage.scm,
gnu/packages/sync.scm,
gnu/packages/terminals.scm,
gnu/packages/textutils.scm,
gnu/packages/time.scm,
gnu/packages/tls.scm,
gnu/packages/tor.scm,
gnu/packages/tryton.scm,
gnu/packages/version-control.scm,
gnu/packages/video.scm,
gnu/packages/virtualization.scm,
gnu/packages/vpn.scm,
gnu/packages/web-browsers.scm,
gnu/packages/web.scm,
gnu/packages/wicd.scm,
gnu/packages/xdisorg.scm,
gnu/packages/xorg.scm: Update module references.
 2019-01-15 14:46:44 +01:00
Ricardo Wurmus
c4153008f7
gnu: python-numpy-documentation: Add missing packages to texlive-union. 
* gnu/packages/python.scm (python-numpy-documentation)[native-inputs]: Add
texlive-fonts-cm-super and texlive-latex-needspace to texlive-union.
 2019-01-15 13:05:22 +01:00
Christopher Baines
24a23bea20
gnu: Add python-miniboa. 
python2-miniboa is required for the linkchecker testsuite.

* gnu/packages/python.scm (python-miniboa, python2-miniboa): New variable.
 2019-01-13 20:47:40 +00:00
Christopher Baines
c4aa1ebc81
gnu: python-pillow: Update to 5.4.1. 
I'm looking at this, as this release fixes an issue with the Django testsuite:

https://github.com/python-pillow/Pillow/pull/3525

* gnu/packages/python.scm (python-pillow): Update to 5.4.1.
 2019-01-13 17:09:52 +00:00
Ricardo Wurmus
9e7f55de45
gnu: Add python-doctest-ignore-unicode. 
* gnu/packages/python.scm (python-doctest-ignore-unicode): New variable.
 2019-01-13 10:07:06 +01:00
Kei Kebreau
ea600ff709
gnu: python-pillow: Update homepage. 
* gnu/packages/python.scm (python-pillow)[homepage]: Update URL.
 2019-01-12 16:39:26 -05:00
Kei Kebreau
acbf312573
gnu: python-pillow: Update to 5.4.0 
* gnu/packages/python.scm (python-pillow): Update to 5.4.0.
[arguments]: Add 'patch-ldconfig' phase.
 2019-01-12 16:38:36 -05:00
Efraim Flashner
ab7aa06cac
gnu: python-pygit2: Update to 0.27.3. 
* gnu/packages/python.scm (python-pygit2): Update to 0.27.3.
[arguments]: Add custom phase to compile with cffi support. Add custom
phase to not require specific versions of python-cffi.
[native-inputs]: Add python-pytest.
 2019-01-09 20:25:50 +02:00
Ricardo Wurmus
61f2587db9
gnu: python-rpy2: Move to (gnu packages statistics). 
* gnu/packages/python.scm (python-rpy2): Move from here...
* gnu/packages/statistics.scm (python-rpy2): ...to here.
 2019-01-07 15:55:06 +01:00
Ludovic Courtès
915c6bf60c
gnu: python2-fastlmm: Move to machine-learning.scm. 
This is a step towards removing OCaml modules from the closure
of (gnu packages python).

* gnu/packages/python.scm (python2-fastlmm): Move to...
* gnu/packages/machine-learning.scm (python2-fastlmm): ... here.
 2019-01-07 14:41:01 +01:00
Efraim Flashner
99e61f3022
gnu: python-pyicu: Update to 2.2. 
* gnu/packages/python.scm (python-pyicu): Update to 2.2.
 2019-01-06 11:09:59 +02:00
Efraim Flashner
a0bb4af215
gnu: python-pysocks: Update to 1.6.8. 
* gnu/packages/python.scm (python-pysocks): Update to 1.6.8.
 2019-01-06 11:09:58 +02:00
Efraim Flashner
1fb68eefa1
gnu: python-packaging: Update to 18.0. 
* gnu/packages/python.scm (python-packaging): Update to 18.0.
 2019-01-06 11:09:58 +02:00
Efraim Flashner
3cf324665d
gnu: python-astroid: Update to 2.1.0. 
* gnu/packages/python.scm (python-astroid): Update to 2.1.0.
 2019-01-06 11:09:58 +02:00
Efraim Flashner
36df69d6fe
gnu: python-imagesize: Update to 1.1.0. 
* gnu/packages/python.scm (python-imagesize): Update to 1.1.0.
 2019-01-06 11:09:57 +02:00
Efraim Flashner
46930b7ea9
gnu: python-sphinx-alabaster-theme: Update to 0.7.12. 
* gnu/packages/python.scm (python-sphinx-alabaster-theme): Update to 0.7.12.
 2019-01-06 11:09:57 +02:00
Ricardo Wurmus
9fb5771af7
gnu: jupyter: Add missing dependency. 
* gnu/packages/python.scm (jupyter)[propagated-inputs]: Add python-qtconsole.
[home-page]: Use https URL.
[arguments]: Update comment on why tests are disabled.
 2019-01-02 16:33:57 +01:00
Ricardo Wurmus
38306e1168
gnu: Add python-qtconsole. 
* gnu/packages/python.scm (python-qtconsole): New variable.
 2019-01-02 16:33:57 +01:00
Ricardo Wurmus
91dd8b3687
gnu: python-notebook: Update to 5.7.4. 
* gnu/packages/python.scm (python-notebook): Update to 5.7.4.
[arguments]: Use INVOKE for tests.
[propagated-inputs]: Remove python-ipython; add python-prometheus-client,
python-send2trash, and python-terminado.
 2019-01-02 16:33:57 +01:00
Ricardo Wurmus
493e5e6daa
gnu: python-jupyter-console: Fix inputs. 
* gnu/packages/python.scm (python-jupyter-console)[propagated-inputs]: Remove
python-ipython; replace python-prompt-toolkit with python-prompt-toolkit-1.
[native-inputs]: Add python-nose.
 2019-01-02 16:33:57 +01:00
Ricardo Wurmus
4fc112b452
gnu: python-ipython: Remove dependency on python-jupyter-core-minimal. 
* gnu/packages/python.scm (python-ipython)[propagated-inputs]: Remove
python-jupyter-core-minimal.
 2019-01-02 16:33:57 +01:00
Ricardo Wurmus
88bf9be38e
gnu: python-ipywidgets: Enable tests. 
* gnu/packages/python.scm (python-ipywidgets)[arguments]: Remove.
[native-inputs]: Add python-nose and python-pytest.
[propagated-inputs]: Remove python-ipykernel.
 2019-01-02 16:33:57 +01:00
Ricardo Wurmus
fec14302d5
gnu: python-widgetsnbextension: Update to 3.4.2. 
* gnu/packages/python.scm (python-widgetsnbextension): Update to 3.4.2.
[propagated-inputs]: Add python-ipykernel.
 2019-01-02 16:33:57 +01:00
Ricardo Wurmus
b6fc288e57
gnu: Add python-send2trash. 
* gnu/packages/python.scm (python-send2trash, python2-send2trash): New
variables.
 2019-01-02 16:33:57 +01:00
Ricardo Wurmus
abe50aa369
gnu: Add python-prometheus-client. 
* gnu/packages/python.scm (python-prometheus-client,
python2-prometheus-client): New variables.
 2019-01-02 16:33:57 +01:00
Ricardo Wurmus
ffabccb22f
gnu: python-jupyter-client: Update to 5.2.4. 
* gnu/packages/python.scm (python-jupyter-client): Update to 5.2.4.
 2019-01-02 16:33:57 +01:00
Ricardo Wurmus
75246daff2
gnu: python-ipython: Break dependency on python-ipykernel. 
* gnu/packages/python.scm (python-ipython)[propagated-inputs]: Remove
python-ipykernel.
[arguments]: Delete more broken tests.
 2019-01-02 16:33:57 +01:00
Ricardo Wurmus
f0eb442c20
gnu: python-ipykernel: Update to 5.1.0. 
* gnu/packages/python.scm (python-ipykernel): Update to 5.1.0.
[arguments]: Enable tests.
[propagated-inputs]: Add python-ipython.
[native-inputs]: Add python-pytest and python-nose.
 2019-01-02 16:33:57 +01:00
Ricardo Wurmus
92a9f93615
gnu: python-ipython: Update to 5.8.0. 
* gnu/packages/python.scm (python-ipython): Update to 5.8.0.
[propagated-inputs]: Replace python-prompt-toolkit with
python-prompt-toolkit-1.
[arguments]: Use INVOKE in the "check" phase; return #T from the "fix-tests"
phase.
 2019-01-02 16:33:56 +01:00
Ricardo Wurmus
464cb5b55d
gnu: Add python-prompt-toolkit-1. 
* gnu/packages/python.scm (python-prompt-toolkit-1, python2-prompt-toolkit-1):
New variables.
 2019-01-02 16:33:56 +01:00
Ricardo Wurmus
80486d6673
gnu: python-prompt-toolkit: Update to 2.0.7. 
* gnu/packages/python.scm (python-prompt-toolkit): Update to 2.0.7.
[arguments]: Enable tests; add phase "post-install-check" and delete "check"
phase.
[native-inputs]: Add python-pytest.
 2019-01-02 16:33:56 +01:00
Ricardo Wurmus
eecaf17086
gnu: python-hy: Use INVOKE. 
* gnu/packages/python.scm (python-hy)[arguments]: Use INVOKE.
 2019-01-02 16:33:56 +01:00
Ricardo Wurmus
13e7c884c7
gnu: python-clint: Use INVOKE. 
* gnu/packages/python.scm (python-clint)[arguments]: Use INVOKE.
 2019-01-02 16:33:56 +01:00
Ricardo Wurmus
ec933e05a2
gnu: python-configargparse: Use INVOKE. 
* gnu/packages/python.scm (python-configargparse)[arguments]: Use INVOKE.
 2019-01-02 16:33:56 +01:00
Ricardo Wurmus
cd70798a23
gnu: python-docopt: Use INVOKE. 
* gnu/packages/python.scm (python-docopt)[arguments]: Use INVOKE.
 2019-01-02 16:33:53 +01:00
Leo Famulari
eff366b469
gnu: python-lxml: Update to 4.2.5 [fixes CVE-2018-19787]. 
* gnu/packages/python.scm (python-lxml, python2-lxml): Update to 4.2.5.
 2018-12-31 10:36:43 -05:00
Efraim Flashner
fb075e2fda
gnu: python-apache-libcloud: Update to 2.4.0. 
* gnu/packages/python.scm (python-apache-libcloud): Update to 2.4.0.
 2018-12-26 12:29:45 +02:00
Vagrant Cascadian
9f23f6bc2f
gnu: python-pyelftools: Fix tests with python 3.7. 
* gnu/packages/python.scm (python-pyelftools)
  [native-inputs]: Remove python-setuptools.
  [arguments]: Add set-pythonpath phase.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2018-12-16 11:55:13 +02:00
Christopher Baines
95ae013092
gnu: python-celery: Update to 4.2.1. 
This is an attempt to get the package building after the update to Python
3.7. I'm not sure this totally works, as the tests detect an incompatibility
with Python 3.7 due to use of "async". But with the tests disabled, you can at
least import the celery module, which is a start.

* gnu/packages/python.scm (python-celery): Update to 4.2.1.
[arguments]: Switch to py.test, from nose, disable the tests and loosen the
requirements on pytest.
[native-inputs]: Remove python-nose, add python-pytest and python-case.
[home-page]: Change from HTTP to HTTPS.
 2018-12-12 09:03:28 +01:00
Christopher Baines
ae218b75f6
gnu: python-billiard: Update to 3.5.0.5. 
This is to enable updating python-celery.

* gnu/packages/python.scm (python-billiard): Update to 3.5.0.5.
[native-inputs]: Remove python-nose, add python-case and python-pytest.
 2018-12-12 09:03:27 +01:00
Christopher Baines
f6c19fe8ce
gnu: python-kombu: Update to 4.2.2. 
This fixes the build, that probably broke with a Python update.

* gnu/packages/python.scm (python-kombu): Update to 4.2.2..
 2018-12-12 09:03:27 +01:00
Christopher Baines
a65a33d070
gnu: python-amqp: Update to 2.3.2. 
This is needed to update python-kombu to 4.2.2.

* gnu/packages/python.scm (python-amqp): Update to 2.3.2.
 2018-12-12 09:03:27 +01:00
Christopher Baines
9253c42973
gnu: Add python-pyro4. 
This is needed to update python-kombu to 4.2.2

* gnu/packages/python.scm (python-pyro4): New variable.
 2018-12-12 09:03:27 +01:00
Christopher Baines
2cfcab3aef
gnu: Add python-vine. 
This is needed to update python-amqp to 2.3.2.

* gnu/packages/python.scm (python-vine): New variable.
 2018-12-12 09:03:27 +01:00
Christopher Baines
679c979f25
gnu: Add python-case. 
This is required to update python-amqp and python-kombu, as well as adding
python-vine.

* gnu/packages/python.scm (python-case): New variable.
 2018-12-12 09:03:27 +01:00
Christopher Baines
053f3d4857
gnu: Add python-serpent. 
This is required for python-pyro4, which is needed to update python-amqp and
python-kombu.

* gnu/packages/python.scm (python-serpent): New variable.
 2018-12-12 09:03:26 +01:00
Rutger Helling
799f5d0df0
gnu: python-gevent: Remove unreliable test. 
* gnu/packages/python.scm (python-gevent): Add 'skip-timer-test phase from
python2-gevent.
* gnu/packages/python.scm (python2-gevent): Remove 'skip-timer-test phase,
inherit from python-gevent instead.
 2018-12-11 11:47:34 +01:00
Maxim Cournoyer
584d5556d4
gnu: python-jedi: Update to 0.13.1 and disable the tests. 
Jedi test suite fails when run with Python 3.7.

* gnu/packages/python.scm (python-jedi): Update to 0.13.1
[tests?] Disable.
[phases] Add condition check for the tests? argument to run the tests.
 2018-12-09 16:18:18 -05:00