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Author SHA1 Message Date
Marius Bakke
d73b88d826
gnu: TimescaleDB: Update to 2.7.0. 
* gnu/packages/databases.scm (timescaledb): Update to 2.7.0.
[source](snippet): Remove more files.
[source](patches): New field.
* gnu/packages/patches/timescaledb-flaky-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
 2022-06-14 23:33:52 +02:00
Marius Bakke
b98a61a8f8
gnu: ruby-pg: Update to 1.3.5. 
* gnu/packages/ruby.scm (ruby-pg): Update to 1.3.5.
[home-page]: Change to current.
[source]: Switch to GIT-FETCH.
[arguments]: Add #:phases.
 2022-06-14 23:33:52 +02:00
Marius Bakke
4601dccb36
gnu: PostgreSQL@13: Update replacement to 13.7 [fixes CVE-2022-1552]. 
* gnu/packages/databases.scm (postgresql-13/replacement): Update to 13.7.
 2022-06-14 23:33:52 +02:00
Marius Bakke
3787f56734
gnu: PostgreSQL@10: Update to 10.21 [fixes CVE-2022-1552]. 
* gnu/packages/databases.scm (postgresql-10): Update to 10.21.
 2022-06-14 23:33:52 +02:00
Marius Bakke
a18f937b56
gnu: PostgreSQL@11: Update to 11.16 [fixes CVE-2022-1552]. 
* gnu/packages/databases.scm (postgresql-11): Update to 11.16.
 2022-06-14 23:33:52 +02:00
Marius Bakke
f4f31bb99c
gnu: PostgreSQL@14: Update to 14.3 [fixes CVE-2022-1552]. 
* gnu/packages/databases.scm (postgresql-14): Update to 14.3.
 2022-06-14 23:33:51 +02:00
Marius Bakke
e03b450c36
gnu: PostgreSQL: Permit loading plugins from symlink unions again. 
...this fixes a regression since 49b350fafc where the patch to disable
symlink resolving went missing from versions < 14.

* gnu/packages/databases.scm (postgresql-13/replacement): New variable.
(postgresql-13)[replacement]: New field.
(postgresql-11)[source](patches): Add 'postgresql-disable-resolve_symlinks.patch'.
 2022-06-14 23:33:51 +02:00
Greg Hogan
8e97491277
gnu: dos2unix: Update to 7.4.3. 
* gnu/packages/textutils.scm (dos2unix): Update to 7.4.3.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2022-06-12 02:00:00 +02:00
Greg Hogan
142d136abd
gnu: htop: Update to 3.2.1. 
* gnu/packages/admin.scm (htop): Update to 3.2.1.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2022-06-12 02:00:00 +02:00
Greg Hogan
ad05cb6a3c
gnu: ccache: Update to 4.6.1. 
* gnu/packages/ccache.scm (ccache): Update to 4.6.1.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2022-06-12 02:00:00 +02:00
Maxim Cournoyer
4e93ca70da
doc: Document how to repair Guix System from a chroot. 
* doc/guix.texi (System Troubleshooting Tips): New chapter.
 2022-06-14 15:19:35 -04:00
Maxim Cournoyer
a860a5fa95
services: dbus: Add a VERBOSE? configuration option. 
* gnu/services/dbus.scm (<dbus-configuration>)[verbose?]: New field.
(dbus-shepherd-service): Use it.
(dbus-service)[verbose?]: Add argument and update doc.
* doc/guix.texi (Desktop Services): Document it.
 2022-06-14 14:23:21 -04:00
Maxim Cournoyer
3aaf52a129
gnu: Add dbus-verbose. 
* gnu/packages/glib.scm (dbus-verbose): New variable.
 2022-06-14 14:23:21 -04:00
Liliana Marie Prikler
330d2778a9
gnu: komikku: Update to 0.39.0. 
* gnu/packages/gnome.scm (komikku): Update to 0.39.0.
 2022-06-14 19:01:33 +02:00
Liliana Marie Prikler
391544a596
gnu: webkitgtk: Update to 2.36.3. 
* gnu/packages/webkit.scm (webkitgtk): Update to 2.36.3.
 2022-06-14 19:01:29 +02:00
Maxim Cournoyer
3dd32e76b0
gnu: h-client: Fetch source from Savannah again. 
* gnu/packages/hardware.scm (h-client)[source]: Update URL and associated
comment.
 2022-06-14 11:56:03 -04:00
Guillaume Le Vaillant
99c43cf344
gnu: cl-fof: Update to 0.2.0-1.522879e. 
* gnu/packages/lisp-xyz.scm (sbcl-fof): Update to 0.2.0-1.522879e.
  [inputs]: Sort inputs.
  [arguments]: Remove 'fix-build' phase.
 2022-06-14 16:18:07 +02:00
Guillaume Le Vaillant
d1f3bba66c
gnu: cl-dexador: Remove input labels. 
* gnu/packages/lisp-xyz.scm (sbcl-dexador)[inputs, native-inputs]: Remove
  labels and sort inputs.
 2022-06-14 15:54:09 +02:00
André A. Gomes
893fc788fb
gnu: cl-dexador: Update to 0.9.15-1.74a233e. 
* gnu/packages/lisp-xyz.scm (sbcl-dexador): Update to 0.9.15-1.74a233e.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-06-14 15:53:20 +02:00
Guillaume Le Vaillant
0fd660a2b2
gnu: cl-fof: Fix build with recent cl-serapeum. 
* gnu/packages/lisp-xyz.scm (sbcl-fof)[inputs]: Remove labels and add
  sbcl-named-readtables.
  [arguments]: Add 'fix-build' phase.
 2022-06-14 15:38:21 +02:00
Paul A. Patience
50b6377bc4
gnu: cl-serapeum: Update to 0.0.0-7.d2150c6. 
* gnu/packages/lisp-xyz.scm (sbcl-serapeum): Update to 0.0.0-7.d2150c6.
  [inputs]: Remove sbcl-named-readtables and sbcl-fare-quasiquote.
  Add sbcl-introspect-environment and sbcl-trivial-cltl2.
  [native-inputs]: Add sbcl-atomics.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-06-14 15:20:47 +02:00
Paul A. Patience
f11b6ac9ac
gnu: cl-serapeum: Use G-expressions. 
* gnu/packages/lisp-xyz.scm (sbcl-serapeum)[arguments]: Use G-expressions and
  simplify the 'disable-failing-tests' phase.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-06-14 15:15:42 +02:00
Paul A. Patience
240ac3b75c
gnu: cl-serapeum: Remove input labels. 
* gnu/packages/lisp-xyz.scm (sbcl-serapeum)[inputs, native-inputs]: Remove
  labels.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-06-14 15:14:24 +02:00
Arun Isaac
6f75565b4e
gnu: python-httpx: Update to 0.23.0. 
* gnu/packages/python-web.scm (python-httpx): Update to 0.23.0.
 2022-06-14 18:06:24 +05:30
Arun Isaac
2ac81f482a
gnu: python-httpcore: Update to 0.15.0. 
* gnu/packages/python-web.scm (python-httpcore): Update to 0.15.0.
[arguments]: Override asyncio_mode when invoking pytest in check phase.
 2022-06-14 18:06:20 +05:30
Tobias Geerinckx-Rice
2682b12ca4
gnu: dovecot: Update to 2.3.19.1. 
* gnu/packages/mail.scm (dovecot): Update to 2.3.19.1.
 2022-06-12 02:00:09 +02:00
Tobias Geerinckx-Rice
e1b647fdf6
gnu: sudo: Update to 1.9.11p2. 
* gnu/packages/admin.scm (sudo): Update to 1.9.11p2.
 2022-06-12 02:00:00 +02:00
Tobias Geerinckx-Rice
998d9a6183
pull: Fix typo in error message. 
* guix/scripts/pull.scm (guix-pull): Report the right user name/ID.
 2022-06-12 02:00:00 +02:00
Tobias Geerinckx-Rice
88b098d9ba
gnu: python-parted: Rename to python-pyparted. 
* gnu/packages/disk.scm (python-pyparted): New variable renamed from…
(python-parted): …this, to better follow the package naming guidelines.
Redefine it using DEPRECATED-PACKAGE.
 2022-06-12 02:00:00 +02:00
Tobias Geerinckx-Rice
67ff676792
gnu: python-parted: Update to 3.12.0. 
* gnu/packages/disk.scm (python-parted): Update to 3.12.0.
[arguments]: Run the default 'check phase at the default time.
 2022-06-12 02:00:00 +02:00
Vagrant Cascadian
824f2afcf0
gnu: autogen: Build reproducibly. 
* gnu/packages/autogen.scm (autogen)[arguments]: Add
  'use-numeric-ids-in-tarball phase.
 2022-06-13 20:56:47 -07:00
Vagrant Cascadian
3691e37eb1
gnu: autogen: Build with guile 3.0. 
* gnu/packages/autogen.scm (autogen)[arguments]: Add 'support-guile-3.0 phase.
  [inputs]: Remove guile-2.2 and add guile-3.0.
 2022-06-13 20:56:30 -07:00
Artyom V. Poptsov
4ff9f1689d
gnu: java-commons-lang3: Update to 3.12.0 
* gnu/packages/java.scm (java-commons-lang3): Update to 3.12.0.
* gnu/packages/patches/java-commons-lang-fix-dependency.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2022-06-13 22:49:13 +02:00
Andreas Enge
f2ed82eb53
gnu: sollya: Update to 8.0. 
* gnu/packages/algebra.scm (sollya): Update to 8.0.
 2022-06-13 17:50:28 +02:00
Andreas Enge
89fefe2fd4
gnu: python-fpylll: Update to 0.5.7. 
* gnu/packages/algebra.scm (python-fpylll): Update to 0.5.7.
  [source]: Revert from git to pypi.
 2022-06-13 17:40:30 +02:00
Andreas Enge
5dec5f65ec
gnu: fplll: Update to 5.4.2. 
* gnu/packages/algebra.scm (fplll): Update to 5.4.2.
[source]: Remove patch; for unknown reasons the package now compiles
without it.
* gnu/packages/patches/fplll-std-fenv.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Unregister patch.
 2022-06-13 17:16:54 +02:00
Ricardo Wurmus
35124d0087
gnu: r-quantpsyc: Update to 1.6. 
* gnu/packages/statistics.scm (r-quantpsyc): Update to 1.6.
[propagated-inputs]: Add r-dplyr and r-purrr.
 2022-06-13 15:24:30 +02:00
Ricardo Wurmus
789c7ab505
gnu: r-mnormt: Update to 2.1.0. 
* gnu/packages/statistics.scm (r-mnormt): Update to 2.1.0.
[propagated-inputs]: Remove r-tmvnsim.
 2022-06-13 15:24:30 +02:00
Ricardo Wurmus
3d7adc9b21
gnu: r-flexmix: Update to 2.3-18. 
* gnu/packages/statistics.scm (r-flexmix): Update to 2.3-18.
 2022-06-13 15:24:30 +02:00
Ricardo Wurmus
5fe57da316
gnu: r-r-oo: Update to 1.25.0. 
* gnu/packages/statistics.scm (r-r-oo): Update to 1.25.0.
 2022-06-13 15:24:30 +02:00
Ricardo Wurmus
ed945c7732
gnu: r-e1071: Update to 1.7-11. 
* gnu/packages/statistics.scm (r-e1071): Update to 1.7-11.
 2022-06-13 15:24:30 +02:00
Ricardo Wurmus
03aba54185
gnu: r-segmented: Update to 1.6-0. 
* gnu/packages/statistics.scm (r-segmented): Update to 1.6-0.
[propagated-inputs]: Add r-nlme.
 2022-06-13 15:24:30 +02:00
Ricardo Wurmus
944b4224e8
gnu: r-xml: Update to 3.99-0.10. 
* gnu/packages/statistics.scm (r-xml): Update to 3.99-0.10.
 2022-06-13 15:24:30 +02:00
Ricardo Wurmus
912792320a
gnu: r-rcurl: Update to 1.98-1.7. 
* gnu/packages/statistics.scm (r-rcurl): Update to 1.98-1.7.
 2022-06-13 15:24:29 +02:00
Ricardo Wurmus
ebcb0aa321
gnu: r-dbplyr: Update to 2.2.0. 
* gnu/packages/statistics.scm (r-dbplyr): Update to 2.2.0.
[propagated-inputs]: Remove r-ellipsis; add r-cli and r-pillar.
 2022-06-13 15:24:29 +02:00
Ricardo Wurmus
e1297b31c1
gnu: r-sendmailr: Update to 1.2-1.1. 
* gnu/packages/statistics.scm (r-sendmailr): Update to 1.2-1.1.
 2022-06-13 15:24:29 +02:00
Ricardo Wurmus
d7d62bcd61
gnu: r-zoom: Update to 2.0.6. 
* gnu/packages/cran.scm (r-zoom): Update to 2.0.6.
 2022-06-13 15:24:29 +02:00
Ricardo Wurmus
23c6a87e5d
gnu: r-pkgdown: Update to 2.0.4. 
* gnu/packages/cran.scm (r-pkgdown): Update to 2.0.4.
 2022-06-13 15:24:29 +02:00
Ricardo Wurmus
b7b5e7d4f2
gnu: r-infer: Update to 1.0.2. 
* gnu/packages/cran.scm (r-infer): Update to 1.0.2.
 2022-06-13 15:24:29 +02:00
Ricardo Wurmus
fa3f80e44f
gnu: r-yardstick: Update to 1.0.0. 
* gnu/packages/cran.scm (r-yardstick): Update to 1.0.0.
[propagated-inputs]: Remove r-proc; add r-hardhat.
 2022-06-13 15:24:29 +02:00