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Author SHA1 Message Date
Ricardo Wurmus
dfd3934b6b
gnu: r-rsqlite: Update to 2.3.2. 
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.3.2.

Change-Id: I97532cd5834e0aad84d7072f7f93bae612ad93bf
 2023-10-31 21:57:58 +01:00
Efraim Flashner
e82b700228
gnu: b43-tools: Use make-flags. 
* gnu/packages/firmware.scm (b43-tools)[arguments]: Add make-flags.
Use make-flags in custom 'build and 'install phases.  Remove trailing #t
from phases.

Change-Id: I8576351ecd571d191598943a2d143ab3e3e9da09
 2023-10-31 22:32:53 +02:00
Maxim Cournoyer
d96a9c7473
gnu: python-radio-beam: Update to 0.3.6. 
* gnu/packages/astronomy.scm (python-radio-beam): Update to 0.3.6.
[native-inputs]: Add python-setuptools-scm.

Change-Id: I3be87a22b701119699d37104f8df4f3fab44d0c8
 2023-10-31 13:15:25 -04:00
Maxim Cournoyer
6318e7a851
gnu: python-spectral-cube: Update to 0.6.3. 
* gnu/packages/astronomy.scm (python-spectral-cube): Update to 0.6.3.
[native-inputs]: Add python-setuptools-scm.

Change-Id: I8b701081d2c8ea2fd8f25ca845e8e26760fdc094
 2023-10-31 13:15:25 -04:00
Sharlatan Hellseher
5e5547d1b3
gnu: Add python-spectral-cube. 
* gnu/packages/astronomy.scm (python-spectral-cube): New variable.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2023-10-31 13:15:25 -04:00
Sharlatan Hellseher
c1e3ad850d
gnu: Add python-aplpy. 
* gnu/packages/astronomy.scm (python-aplpy): New variable.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2023-10-31 13:15:24 -04:00
Sharlatan Hellseher
4b1dce7185
gnu: Add python-pyregion. 
* gnu/packages/astronomy.scm (python-pyregion): New variable.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2023-10-31 13:15:24 -04:00
Sharlatan Hellseher
ea2e0eb36b
gnu: Add python-pyavm. 
* gnu/packages/astronomy.scm (python-pyavm): New variable.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2023-10-31 13:15:24 -04:00
Sharlatan Hellseher
c82c6807e8
gnu: Add python-radio-beam. 
* gnu/packages/astronomy.scm (python-radio-beam): New variable.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2023-10-31 13:15:24 -04:00
Tobias Geerinckx-Rice
5e7f27d6ca
gnu: opensmtpd: Update to 7.4.0p0 (bis). 
This time fixing a segfault reported & debugged entirely by graywolf.
See: <https://github.com/OpenSMTPD/OpenSMTPD/issues/1233>

So, what went wrong here?  Mostly me being entirely convinced, to the
point of not even looking, that we have no opensmtpd system test.  We
do.  Instead, I tested the update on my own mail server, which for
entirely unhysterical raisins happens to link OpenSMTPd against OpenSSL
and so just happens to sidestep this bug.  Aiya.

* gnu/packages/mail.scm (opensmtpd): Update to 7.4.0p0.
[native-inputs]: Add pkg-config.
[inputs]: Add libbsd.
[arguments]: Add "--with-libbsd" to #:configure-flags.

Co-authored-by: graywolf in #guix
Change-Id: I5536b828eecd16f041ed9381b16bd7aa54158155
 2023-10-29 02:00:00 +02:00
Mădălin Ionel Patrașcu
a0a377fdd6
gnu: Add r-radiogx. 
* gnu/packages/bioconductor.scm (r-radiogx): New variable.

Change-Id: I8fd06a18bd68f9a3baa2cc129d62aef06528bc97
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2023-10-31 13:58:08 +01:00
Mădălin Ionel Patrașcu
7170720e48
gnu: Add r-coregx. 
* gnu/packages/bioconductor.scm (r-coregx): New variable.

Change-Id: Ib54ba3c7bebdcc90748d4e4b0b2ce63b7f0fc1b8
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2023-10-31 13:58:08 +01:00
Mădălin Ionel Patrașcu
e8cd556a7c
gnu: Add r-piano. 
* gnu/packages/bioconductor.scm (r-piano): New variable.

Change-Id: I1bc2387563510c47614748423a3b510adc0486aa
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2023-10-31 13:58:08 +01:00
Mădălin Ionel Patrașcu
a8680f59e3
gnu: Add r-bench. 
* gnu/packages/cran.scm (r-bench): New variable.

Change-Id: I9948ff12729b08dd4016df272777651a6b6de2e0
 2023-10-31 13:58:08 +01:00
Mădălin Ionel Patrașcu
4903e70993
gnu: Add r-profmem. 
* gnu/packages/cran.scm (r-profmem): New variable.

Change-Id: If99cf8e963601e9f0a664f12ef263a064b59b0d6
 2023-10-31 13:58:08 +01:00
Mădălin Ionel Patrașcu
b538ce0c60
gnu: Add r-relations. 
* gnu/packages/cran.scm (r-relations): New variable.

Change-Id: I4bf67353aa7f7221592d274d61c74b83191a6281
 2023-10-31 13:58:08 +01:00
Mădălin Ionel Patrașcu
91ba3ea8eb
gnu: Add r-magicaxis. 
* gnu/packages/cran.scm (r-magicaxis): New variable.

Change-Id: I9843dcf90cd6d85799fab688d6dccfcfacfad672
 2023-10-31 13:58:08 +01:00
Mădălin Ionel Patrașcu
48b2478067
gnu: Add r-celestial. 
* gnu/packages/cran.scm (r-celestial): New variable.

Change-Id: I9ab9c6b6c79f2fb12d7391a75e7214bbeba675fc
 2023-10-31 13:58:08 +01:00
Mădălin Ionel Patrașcu
f123b38090
gnu: Add r-nistunits. 
* gnu/packages/cran.scm (r-nistunits): New variable.

Change-Id: I66328b54045a3125e5f3033605be88e3a1b2646a
 2023-10-31 13:58:08 +01:00
Mădălin Ionel Patrașcu
192514e869
gnu: Add r-r4rna. 
* gnu/packages/bioconductor.scm (r-r4rna): New variable.

Change-Id: I1bde2a17b0ba4a97fa54161744f048dbfaf2217a
 2023-10-31 13:58:08 +01:00
Mădălin Ionel Patrașcu
d24c1078d2
gnu: Add r-r3cseq. 
* gnu/packages/bioconductor.scm (r-r3cseq): New variable.

Change-Id: Ib62db1415ef3988ccef88ad600192246964b4d84
 2023-10-31 13:58:08 +01:00
Yann Dupont
c0895371c5
gnu: lvm2: Remove systemd rule. 
Fixes <https://issues.guix.gnu.org/65177>.
Reported by Adrien 'neox' Bourmault <neox@gnu.org>.

* gnu/packages/patches/lvm2-no-systemd.patch: New file.
* gnu/packages/linux.scm (lvm2)[source]: Apply patch.
* gnu/local.mk: Register new patch.

Signed-off-by: Simon Tournier <zimon.toutoune@gmail.com>
Change-Id: I6b9d583f5914cc127c067829b5891827c04608cb
 2023-10-31 09:56:13 +01:00
Ricardo Wurmus
5cbb0b15cc
gnu: coturn: Update to 4.6.2. 
* gnu/packages/telephony.scm (coturn): Update to 4.6.2.

Change-Id: If0b46af1a034a72a49c00b1e2a871ea636d203f2
 2023-10-31 09:47:54 +01:00
Tobias Geerinckx-Rice
b71c7c472a
Revert "gnu: opensmtpd: Update to 7.4.0p0." 
This reverts commit b6e8d587c4
pending investigation of a segfault reported by graywolf in #guix.
 2023-10-29 02:00:00 +02:00
Tobias Geerinckx-Rice
e49fdc231b
Revert "gnu: linux-libre@6: Enable Coreboot framebuffer support (again)." 
This reverts commit 6d7e181ba1.
 2023-10-29 02:00:00 +02:00
Ricardo Wurmus
7e9783b2ab
gnu: Add python-ml-collections. 
* gnu/packages/machine-learning.scm (python-ml-collections): New variable.

Change-Id: I9299fe4221f13d979266fccc7b9cdd96a8d6e678
 2023-10-30 13:00:56 +01:00
Ricardo Wurmus
f330920a14
gnu: python-dm-tree: Use static abseil-cpp. 
* gnu/packages/python-xyz.scm (python-dm-tree)[inputs]: Replace abseil-cpp
with static-abseil-cpp.
[arguments]: Reference static libraries.

Change-Id: I11b58ad907a3e59b98c28d6c2f6fb7bcc15be742
 2023-10-30 12:25:47 +01:00
Ricardo Wurmus
6797aac408
gnu: Add static-abseil-cpp. 
* gnu/packages/cpp.scm (static-abseil-cpp): New variable.
(make-static-abseil-cpp): New procedure.

Change-Id: I0b0b17b31461baf1189d7c818a82c99baad253c1
 2023-10-30 12:25:47 +01:00
Leo Famulari
5746d043a6
gnu: transmission: Update to 4.0.4. 
* gnu/packages/bittorrent.scm (transmission): Update to 4.0.4.
[synopsis]: Remove "marketing phrases".

Change-Id: Ibecdf14198ba926eea66ff5ba29ec05fbd27fde2
Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-10-30 11:17:43 +00:00
Liliana Marie Prikler
4d52378daa
gnu: cockatrice: Update to 2.9.0. 
* gnu/packages/games.scm (cockatrice): Update to 2.9.0.

Change-Id: Ia963a45ff49af40295329fd99db0dd039e314b77
Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-10-30 11:17:43 +00:00
Ahmad Draidi
500eee9c84
gnu: labwc: Update to 0.6.5. 
* gnu/packages/wm.scm (labwc): Update to 0.6.5.
[inputs]: Add librsvg.

Change-Id: I2812e78aa5ee6e2a19ed5e8756aac0e0f83610db
Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-10-30 11:17:43 +00:00
Jack Hill
85451b38dd
gnu: ansible: Update to 8.5.0. 
* gnu/packages/admin.scm (ansible): Update to 8.5.0.

Change-Id: I38ac84a0945f3ba10e13246cf8ae95c3795b52b3
Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-10-30 11:17:43 +00:00
Jack Hill
4af23bc03c
gnu: Remove python-resolvelib@0.5. 
* gnu/packages/python-xyz.scm (python-resolvelib-0.5): Delete
variable. This was only used by ansible-core which can now use the
newer version.

Change-Id: Ic40e21561807ed5faae466e13193892e4f9aa6ae
Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-10-30 11:17:42 +00:00
Jack Hill
a85cbaa437
gnu: ansible-core: Update to 2.15.5 and fix tests. 
* gnu/packages/admin.scm (ansible-core): Update to 2.15.5.
[#:phases]<check>: Enable tests that now pass and choose
the right ansible-test to invoke.
[propagated-inputs]: Replace python-resolvelib-0.5 with python-resolvelib.

Change-Id: Ibda3222a16fefb1484affdb62e38a3a07ce61986
Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-10-30 11:17:42 +00:00
Sebastian Gibb
549d7ce3b3
gnu: Add r-consort. 
* gnu/packages/consort.scm (r-consort): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
Change-Id: I37bae26b3271f2c8e4d73bb72e11bc475168b0f7
 2023-10-30 11:17:42 +00:00
gemmaro
789ef6837f
gnu: Add online-judge-tools. 
* gnu/packages/python-xyz.scm (online-judge-tools): New variable.
* gnu/packages/patches/online-judge-tools.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patch file.

Signed-off-by: Christopher Baines <mail@cbaines.net>
Change-Id: I78315db15ca8205dff607e98388c404ede64fb60
 2023-10-30 11:17:42 +00:00
gemmaro
9524ff9f3a
gnu: Add python-online-judge-api-client. 
* gnu/packages/python-xyz.scm (python-online-judge-api-client): New variable.
* gnu/packages/patches/python-online-judge-api-client-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patch file.

Signed-off-by: Christopher Baines <mail@cbaines.net>
Change-Id: If407a070a52e66c723d042217a5ff6e1589efce1
 2023-10-30 11:17:42 +00:00
Giacomo Leidi
db5c83e83b
gnu: Add aerich. 
* gnu/packages/databases.scm (aerich): New variable.

Change-Id: I322d619dc80c943d50e28a96ba74d276784ab8da
Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-10-30 11:17:42 +00:00
Giacomo Leidi
6127283151
gnu: Add python-ddlparse. 
* gnu/packages/python-xyz.scm (python-ddlparse): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-10-30 11:17:42 +00:00
Vinicius Monego
a0eb6652b3
gnu: Add ffmpeg-normalize. 
* gnu/packages/video.scm (ffmpeg-normalize): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-10-30 11:17:42 +00:00
Vinicius Monego
0fcbca2721
gnu: Add ffmpeg-progress-yield. 
* gnu/packages/video.scm (ffmpeg-progress-yield): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2023-10-30 11:17:39 +00:00
Ricardo Wurmus
5d79012073
gnu: Add r-voltron. 
* gnu/packages/bioinformatics.scm (r-voltron): New variable.

Change-Id: I5f70cf613bf2c26c4ca119483c9ad3b0beba6502
 2023-10-30 10:48:16 +01:00
Janneke Nieuwenhuizen
db6b00795a
gnu: dezyne: Update to 2.17.7. 
* gnu/packages/dezyne.scm (dezyne): Update to 2.17.7.

Change-Id: I278e4e17f49b15600689cebda04298de6bbc8a65
 2023-10-30 10:14:37 +01:00
Philip McGrath
642769707c
gnu: nghttp2: Replace with 1.57.0. 
This release mitigates CVE-2023-44487.

* gnu/packages/web.scm (nghttp2-1.57): New variable.
(nghttp2)[replacement]: Use it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-30 00:29:53 +01:00
Skyler Ferris
593a2e6354
gnu: file-systems: Add xenfs to %pseudo-file-system-types. 
* gnu/system/file-systems.scm (%pseudo-file-system-types): Add xenfs.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2023-10-30 00:20:42 +01:00
Ludovic Courtès
e7f7bb0af5
gnu: cuirass: Update to 1.2.0. 
* gnu/packages/ci.scm (cuirass): Update to 1.2.0.

Change-Id: Iada634a9d66ea3bf1035084970cf560ff5303c28
 2023-10-30 00:19:07 +01:00
Clément Lassieur
26565f1bc8
gnu: passff-host: Fix builder issues. 
* gnu/packages/browser-extensions.scm (passff-host)[arguments]: Use
`patch-shebang` instead of wrong `substitute*`, add newline after
substitution.

Change-Id: I6cd1d681e9e84bdeb24943dfe1d85d996f1a262b
 2023-10-29 15:46:20 +01:00
Simon Tournier
1dae566182
gnu: emacs-julia-mode: Update to 0.4-0.7a8c868. 
* gnu/packages/emacs-xyz.scm (emacs-julia-mode): Update to 0.4-0.7a8c868.
[arguments]: Convert to list of G-Expressions.

Change-Id: I3d06dbe824ce989400d801118e8bca496ae4b3e2
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
 2023-10-29 13:15:44 +01:00
Simon Tournier
800ed532d2
gnu: emacs-julia-mode: Exclude tests that fail with Emacs 29. 
* gnu/packages/emacs-xyz.scm (emacs-julia-mode)[#:phases]: Add ‘fix-tests’.

Change-Id: I1da1077a7e7e077392458243b2d3cd44592ebd45
Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
 2023-10-29 13:15:44 +01:00
John Kehayias
2b5c6e1a41
gnu: godot: Update to 4.1.2. 
* gnu/packages/game-development.scm (godot): Update to 4.1.2.

Change-Id: I358305245305c2cf31e40ce1d33f28c97c224b52
 2023-10-28 23:09:19 -04:00