Commit graph

7756 commits

Author SHA1 Message Date
宋文武
e28f95a963 gnu: python-pygobject: Add search path for GI_TYPELIB_PATH.
* gnu/packages/glib.scm (python-pygobject)[native-search-paths]: Use the
same search paths as gobject-introspection.
2016-03-07 09:57:20 +08:00
宋文武
b3585d9bda gnu: orc: Update to 0.4.25.
* gnu/packages/gstreamer.scm (orc): Update to 0.4.25.
2016-03-07 09:57:20 +08:00
宋文武
60a0886d72 services: Use 'packages->manifest' in 'packages->profile-entry'.
This allows using (PACKAGE OUTPUT) in the packages field.
Reported by Jan Nieuwenhuizen <janneke@gnu.org>.

* gnu/services.scm (packages->profile-entry): Use 'packages->manifest'.
2016-03-07 09:57:20 +08:00
Ludovic Courtès
956ad60cad services: elogind: Rely on D-Bus activation.
Previously elogind was explicitly spawned by the Shepherd.  Now it is
activated by dbus-daemon on demand.

* gnu/packages/freedesktop.scm (elogind)[arguments]: Add
'fix-service-file' phase.
* gnu/services/desktop.scm (elogind-shepherd-service): Remove.
(elogind-dbus-service): New procedure.
(elogind-service-type): Do not extend SHEPHERD-ROOT-SERVICE-TYPE.  Use
'elogind-dbus-service' for DBUS-ROOT-SERVICE-TYPE.
2016-03-07 00:01:03 +01:00
Ricardo Wurmus
afadb05e58 gnu: alsa-modular-synth: Insert space to separate linker flags.
* gnu/packages/audio.scm (alsa-modular-synth)[arguments]: Add build
phase to separate linker flags.
2016-03-06 21:17:05 +01:00
Ricardo Wurmus
ee6a88b118 gnu: alsa-modular-synth: Drop Qt 4.
* gnu/packages/audio.scm (alsa-modular-synth)[inputs]: Replace "qt-4"
with "qt".
[arguments]: Add configure flag to build with Qt 5.
2016-03-06 21:17:05 +01:00
Andreas Enge
451b5c5dc6 gnu: vigra: Update to a development snapshot.
* gnu/packages/image.scm (vigra): Update to a git snapshot to fix build
  problems with the current python-numpy.
2016-03-05 19:09:42 +01:00
Andreas Enge
d7c4619bd1 gnu: Add einstein.
* gnu/packages/games.scm (einstein): New variable.
* gnu/packages/patches/einstein-build.patch: New file.
* gnu-system.am (dist_patch_DATA): Register patch.
2016-03-05 18:44:43 +01:00
Andreas Enge
03d55eeca7 gnu: jalv: Drop Qt-4 support.
* gnu/packages/audio.scm (jalv)[inputs]: Drop qt-4. It does not receive any
  upstream security updates, and Qt-4 support is marked as experimental in
  the jalv documentation.
2016-03-05 12:20:09 +01:00
Leo Famulari
eda0522aab gnu: letsencrypt, python-acme: Update to 0.4.2.
These packages should be updated together.

* gnu/packages/tls.scm (letsencrypt): Update to 0.4.2.
(python-acme, python2-acme): Update to 0.4.2.
2016-03-04 18:10:00 -05:00
Leo Famulari
65f1b8a591 gnu: python-cryptography, python-cryptography-vectors: Update to 1.2.3.
These packages should be updated together.

* gnu/packages/python.scm (python-cryptography): Update to 1.2.3.
(python-cryptography-vectors): Update to 1.2.3.
2016-03-04 18:09:20 -05:00
Ludovic Courtès
44abcb2868 doc: Mention syslogd configuration.
* gnu/services/base.scm (syslog-service): Add xref to Inetutils in the
docstring.
(%default-syslog.conf): Export.
* doc/guix.texi (Base Services): Update accordingly.
2016-03-04 11:48:52 +01:00
Ludovic Courtès
fe4e698d77 gnu: gnome: Sync description and synopsis.
* gnu/packages/gnome.scm (gnome)[synopsis, description]: Use official
GNU blurb.
2016-03-04 11:48:52 +01:00
Ludovic Courtès
ffaf83dfb1 gnu: nano: Update to 2.5.3.
* gnu/packages/nano.scm (nano): Update to 2.5.3.
2016-03-04 11:48:52 +01:00
Ludovic Courtès
4978ffcfc2 gnu: libgit2: Update to 0.23.4.
* gnu/packages/version-control.scm (libgit2): Update to 0.23.4.
2016-03-04 11:48:52 +01:00
Ludovic Courtès
9c7e7eadfa gnu: findnewest: Update to 0.3.
* gnu/packages/version-control.scm (findnewest): Update to 0.3.
2016-03-04 11:48:52 +01:00
Leo Famulari
c7658f8f2c gnu: exim: Update to 4.86.2 [fixes CVE-2016-1531].
* gnu/packages/mail.scm (exim): Update to 4.86.2.
2016-03-03 20:38:47 -05:00
David Thompson
4a52671131 gnu: Add byzanz.
* gnu/packages/gnome.scm (byzanz): New variable.
2016-03-03 20:23:07 -05:00
Efraim Flashner
50b66bf1b0 gnu: youtube-dl: Update to 2016.03.01.
* gnu/packages/video.scm (youtube-dl): Update to 2016.03.01.
2016-03-03 22:55:46 +02:00
Efraim Flashner
581873b55d gnu: mpv: Update to 0.16.0.
* gnu/packages/video.scm (mpv): Update to 0.16.0.
2016-03-03 22:53:37 +02:00
Leo Famulari
d8173f21f7 gnu: perl: Replace with patched version [fixes CVE-2016-2381].
* gnu/packages/patches/perl-CVE-2016-2381.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/perl.scm (perl)[replacement]: New field.
(perl-fixed): New variable.
* gnu/packages/commencement.scm (perl-boot0)[replacement]: New field.
2016-03-03 14:56:23 -05:00
Efraim Flashner
7b3f2682de gnu: irssi: Support proxy, socks, bot.
* gnu/packages/irc.scm (irssi)[arguments]: Add configure flags to
support proxy, socks and bot.
2016-03-03 19:04:31 +02:00
Efraim Flashner
fd41741bdc gnu: irssi: Update to 0.8.18.
* gnu/packages/irc.scm (irssi): Update to 0.8.18.
[source]: Update uri.
2016-03-03 19:04:31 +02:00
Petter
d0a65256a3 system: GRUB menu entry says "beta" instead of "alpha"
* gnu/system.scm (kernel->grub-label): Change "alpha" to "beta'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-03-03 17:42:47 +01:00
Ludovic Courtès
16cc99610d system: Add rfkill to '%base-packages'.
* gnu/system.scm (%base-packages): Add RFKILL.
2016-03-03 17:42:47 +01:00
Ricardo Wurmus
649e9b3b47 gnu: python-pysam: Move cython and setuptools to native inputs.
* gnu/packages/bioinformatics.scm (python-pysam)[inputs]: Move
"python-cython" and "python-setuptools" from here...
[native-inputs]: ... to here.
2016-03-03 13:47:19 +01:00
Ricardo Wurmus
3acb8c857c gnu: deeptools: Update to 2.1.1.
* gnu/packages/bioinformatics.scm (deeptools): Update to 2.1.1.
[inputs]: Add "python2-numpydoc" and "python2-pybigwig".
2016-03-03 13:47:12 +01:00
Ricardo Wurmus
14bda1ff49 gnu: deeptools: Change "propagated-inputs" to "inputs".
* gnu/packages/bioinformatics.scm (deeptools)[propagated-inputs]: Move
all inputs from here...
[inputs]: ...to here.
2016-03-03 13:47:02 +01:00
Ricardo Wurmus
69e0e03c36 gnu: Add python-pybigwig.
* gnu/packages/bioinformatics.scm (python-pybigwig, python2-pybigwig):
  New variables.
2016-03-03 13:46:52 +01:00
Ricardo Wurmus
d454640c38 gnu: python-pysam: Update to 0.8.4.
* gnu/packages/bioinformatics.scm (python-pysam): Update to 0.8.4.
2016-03-03 13:46:39 +01:00
Ricardo Wurmus
55a9a8c2b9 gnu: python-pysam, python2-pysam: Move to bioinformatics.scm.
* gnu/packages/python.scm (python-pysam, python2-pysam): Move to...
* gnu/packages/bioinformatics.scm (python-pysam, python2-pysam):
  ...here.
2016-03-03 13:46:26 +01:00
Lukas Gradl
e90819c40a gnu: Add procmail.
* gnu/packages/patches/procmail-ambiguous-getline-debian.patch: New file.
 * gnu-system.am (dist_patch_DATA): Add it.
 * gnu/packages/mail.scm (procmail): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-03-02 20:44:18 -05:00
Mathieu Lirzin
1b846da8c3 utils: Use '@' for separating package names and version numbers.
This provides the ability to use numbers in package names.

Fixes <http://bugs.gnu.org/19219>.

* guix/utils.scm (package-name->name+version): New procedure.
* gnu/packages.scm (%find-package): Add a FALLBACK? keyword argument.
Use the previous method when no package is found.
(specification->package+output, specification->package): Adapt
documentation to new syntax.
* doc/guix.texi (Invoking guix package, Invoking guix import): Likewise.
* guix/ui.scm (package-specification->name+version+output): Likewise.
* guix/scripts/import/hackage.scm (show-help): Likewise.
* tests/guix-build.sh: Adapt to new syntax.
* tests/guix-lint.sh: Likewise.
* tests/guix-package.sh: Likewise.
* tests/ui.scm ("package-specification->name+version+output"): Likewise.
* tests/utils.scm ("package-name->name+version"): Likewise.
* NEWS: Mention new syntax.
2016-03-02 21:41:41 +01:00
Mathieu Lirzin
fad155d47e packages: Factorize package specification search.
* gnu/packages.scm (%find-package): New procedure.
(specification->package, specification->package+output): Use it.
2016-03-02 21:41:41 +01:00
Mark H Weaver
b134a80c36 gnu: icecat: Update bundled graphite2 to 1.3.6 [unspecified security fixes].
* gnu/packages/patches/icecat-update-graphite2-pt2.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/gnuzilla.scm (icecat)[source]: Add patch.
2016-03-02 15:13:15 -05:00
Mark H Weaver
bd009cd95d gnu: nss: Update to 3.21.1.
* gnu/packages/gnuzilla.scm (nss): Update to 3.21.1.
2016-03-02 15:13:14 -05:00
Mark H Weaver
d47ad0890c gnu: graphite2: Replace with 1.3.6 [unspecified security fixes].
See <https://bodhi.fedoraproject.org/updates/FEDORA-2016-dec1faadc5>

* gnu/packages/fontutils.scm (graphite2)[replacement]: New field.
(graphite2-1.3.6): New variable.
2016-03-02 15:12:18 -05:00
Jessica Tallon
c285a400a2 gnu: Add password-store.
* gnu/packages/password-utils.scm (password-store): New variable.

Co-authored-by: Andreas Enge <andreas@enge.fr>
Co-authored-by: Leo Famulari <leo@famulari.name>
2016-03-02 14:18:51 -05:00
Roel Janssen
dd6e70f920 gnu: Add cppcheck.
* gnu/packages/check.scm (cppcheck): New variable.
2016-03-02 15:17:56 +01:00
Mark H Weaver
ed742bc4b4 gnu: openssl: Enable ssl2 at build time to ensure ABI compatible graft.
Fixes <https://debbugs.gnu.org/22876>
Reported by Christopher Allan Webber <cwebber@dustycloud.org>.

* gnu/packages/tls.scm (openssl-1.0.2g)[arguments]: Override the inherited
  'configure' phase to add "enable-ssl2" as an argument to ./config.
2016-03-02 01:58:42 -05:00
宋文武
6150b5c780 gnu: xfce: Don't wrap 'startxfce4'.
The necessary environment variables are set by 'etc/profile' now.

* gnu/packages/xfce.scm (xfce)[build-system]: Use 'trivial-build-system'.
[arguments]: Simplify.
2016-03-02 08:32:47 +08:00
Leo Famulari
5e8276dcf4 gnu: ilmbase: Add patch to fix build on i686.
Fixes <http://bugs.gnu.org/22049>.

* gnu/packages/patches/ilmbase-fix-tests.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/graphics.scm (ilmbase)[source]: Add patch.
2016-03-01 19:08:31 -05:00
Leo Famulari
88ccca45f6 gnu: openssh: Update to 7.2p1.
* gnu/packages/ssh.scm (openssh): Update to 7.2p1.
2016-03-01 16:32:41 -05:00
Leo Famulari
599860d2b9 gnu: libressl: Update to 2.2.6.
* gnu/packages/tls.scm (libressl): Update to 2.2.6.
2016-03-01 16:30:13 -05:00
Leo Famulari
043c3f0bed gnu: parallel: Update to 20160222.
* gnu/packages/parallel.scm (parallel): Update to 20160222.
2016-03-01 15:15:38 -05:00
Pjotr Prins
f82c8c3cba gnu: r-go-db: Bioconductor changed URL for data downloads.
* gnu/packages/bioinformatics.scm (r-go-db)[source]: Update data URL.
2016-03-01 19:47:26 +02:00
Pjotr Prins
27acfaea4c gnu: r-iranges: Update to 2.4.8.
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.4.8.
2016-03-01 19:47:26 +02:00
Pjotr Prins
8921841da8 gnu: r-s4vectors: Update to 0.8.11.
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.8.11.
2016-03-01 19:47:25 +02:00
Pjotr Prins
b70fa3c7f7 gnu: r-ggplot2: Update to 2.0.0.
* gnu/packages/statistics.scm (r-ggplot2): Update to 2.0.0.
2016-03-01 19:47:24 +02:00
Ludovic Courtès
caeadfddb0 gnu: openssl: Replace with 1.0.2g [fixes CVE-2016-{0800,0705,0798,0797,0799,0702,0703,0704}].
See <http://openssl.org/news/secadv/20160301.txt>.
Also fixes <http://bugs.gnu.org/22831>.

* gnu/packages/patches/openssl-c-rehash-in.patch: New file.
* gnu/packages/tls.scm (openssl)[replacement]: New field.
(openssl-1.0.2g): New variable.
2016-03-01 16:00:46 +01:00