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Author SHA1 Message Date
Ludovic Courtès
93e6a11994
gnu: guile-next: Update to 3.0.7-d70c1db. 
* gnu/packages/guile.scm (guile-next): Update to 3.0.7, commit d70c1db.
 2022-01-06 16:27:31 +01:00
Ludovic Courtès
a21590dabf
gnu: gettext: Work around Gnulib test failures on armhf-linux. 
* gnu/packages/gettext.scm (gettext-minimal)[arguments]: In
'patch-tests' phase, conditionally apply "coreutils-gnulib-tests.patch"
on ARMv7.
 2022-01-06 16:27:31 +01:00
Ludovic Courtès
495ac045a3
gnu: gettext: Use gexps for arguments. 
* gnu/packages/gettext.scm (gettext-minimal)[arguments]: Use gexps.
(gnu-gettext)[arguments]: Likewise.
 2022-01-06 16:27:30 +01:00
Ludovic Courtès
a9268216e4
guix home, system: Use 'leave' to report missing generations. 
Fixes <https://issues.guix.gnu.org/50982>.
Reported by Xinglu Chen <public@yoctocell.xyz>.

Fixes a typo ('error' instead of 'leave') introduced in
158032bd7d and copied in
89e05a6955.

* guix/scripts/system.scm (process-command): Use 'leave', not 'error'.
* guix/scripts/home.scm (process-command): Likewise.
 2022-01-06 16:27:30 +01:00
Sarah Morgensen
9f526f5dad
upstream: Support updating and fetching 'git-fetch' origins. 
Updaters need to be modified to return 'git-reference' objects.
This patch modifies the 'generic-git' and 'minetest' updater,
but others might need to be modified as well.

* guix/git.scm (git-reference->git-checkout): New procedure.
* guix/upstream.scm (package-update/git-fetch): New procedure.
  (<upstream-source>)[urls]: Document it can be a 'git-reference'.
  (%method-updates): Add 'git-fetch' mapping.
  (update-package-source): Support 'git-reference' sources.
  (upstream-source-compiler/url-fetch): Split off from ...
  (upstream-source-compiler): ... this, and call ...
  (upstream-source-compiler/git-fetch): ... this new procedure if the URL
  field contains a 'git-reference'.
* guix/import/git.scm
  (latest-git-tag-version): Always return two values and document that the tag
  is returned as well.
  (latest-git-release)[urls]: Use the 'git-reference' instead of the
  repository URL.
* guix/import/minetest.scm (latest-minetest-release)[urls]: Don't wrap the
  'git-reference' in a list.
* tests/minetest.scm (upstream-source->sexp): Adjust to new convention.

Co-authored-by: Maxime Devos <maximedevos@telenet.be>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-01-06 16:27:30 +01:00
Sarah Morgensen
1c32b4c965
refresh: Support non-tarball sources. 
* guix/scripts/refresh.scm (update-package): Use 'file-hash*' instead of
'port-sha256'.  Rename TARBALL to OUTPUT.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-01-06 16:27:30 +01:00
Sarah Morgensen
b4c677c2ed
import: Factorize file hashing. 
* guix/import/cran.scm (vcs-file?, file-hash): Remove procedures.
  (description->package): Use 'file-hash*' instead.
* guix/import/elpa.scm (vcs-file?, file-hash): Remove procedures.
  (git-repository->origin, elpa-package->sexp): Use 'file-hash* instead'.
* guix/import/go.scm (vcs-file?, file-hash): Remove procedures.
  (git-checkout-hash): Use 'file-hash*' instead.
* guix/import/minetest.scm (file-hash): Remove procedure.
  (make-minetest-sexp): Use 'file-hash*' instead.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-01-06 16:27:30 +01:00
Sarah Morgensen
064c367716
guix hash: Extract file hashing procedures. 
* guix/scripts/hash.scm (guix-hash)[vcs-file?] (nar-hash, default-hash):
  Extract hashing logic to...
* guix/hash.scm (vcs-file?, file-hash*): ... these new procedures in this
  new file.

Modified-by: Maxime Devos <maximedevos@telenet.be>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-01-06 16:27:30 +01:00
Tobias Geerinckx-Rice
0701efb351
doc: Fix typo. 
* doc/guix.texi (Build Utilities): Fix typo.

Reported by Mortimer Cladwell <mbcladwell@gmail.com>
 2022-01-06 15:17:47 +01:00
Christopher Baines
90bc18bcd4
gnu: guix-build-coordinator: Update to 0-46.309fc55. 
* gnu/packages/package-management.scm (guix-build-coordinator): Update to
0-46.309fc55.
 2022-01-06 13:13:22 +00:00
Mathieu Othacehe
5d2b8b0ee3
system: vm: Restore default RAM size to 512MB. 
* gnu/system/vm.scm (system-qemu-image/shared-store-script): Restore it.
 2022-01-06 10:43:14 +01:00
Mathieu Othacehe
67429314e4
gnu: python-intelhex: Update to 2.3.0. 
* gnu/packages/python-xyz.scm (python-intelhex): Update to 2.3.0.
[arguments]: Enable the tests.
 2022-01-06 10:10:53 +01:00
Mathieu Othacehe
cd4092b7a3
services: gnome: Add udev rules. 
Fixes: <https://issues.guix.gnu.org/32166>.

* gnu/services/desktop.scm (gnome-packages, gnome-udev-rules): New procedures.
(gnome-polkit-settings): Use the gnome-packages procedure.
(gnome-desktop-service-type): Add an udev service extension.
 2022-01-06 09:26:39 +01:00
Mathieu Othacehe
2e691011bf
gnu: gnome-settings-daemon: Fix udev directory. 
* gnu/packages/gnome.scm (gnome-settings-daemon)[arguments]
{#:configure-flags}: Fix the udev directory.
 2022-01-06 09:26:38 +01:00
Efraim Flashner
4faade1285
gnu: go-github-com-microcosm-cc-bluemonday: Adjust inputs. 
* gnu/packages/golang.scm (go-github-com-microcosm-cc-bluemonday)
[native-inputs]: Remove go-github-com-aymeric-douceur,
go-github-com-gorillia-css.  Move go-github-com-chris-ramon-douceur,
go-glang-org-x-net ...
[propagated-inputs]: ... to here.
 2022-01-06 09:25:55 +02:00
Ricardo Wurmus
ad82f2a231
gnu: r-tximeta: Update to 1.12.4. 
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.12.4.
 2022-01-06 07:49:41 +01:00
Ricardo Wurmus
cc16a10005
gnu: r-tcgabiolinks: Update to 2.22.2. 
* gnu/packages/bioconductor.scm (r-tcgabiolinks): Update to 2.22.2.
 2022-01-06 07:49:41 +01:00
Ricardo Wurmus
2d4ce9bb5f
gnu: r-biodb: Update to 1.2.2. 
* gnu/packages/bioconductor.scm (r-biodb): Update to 1.2.2.
 2022-01-06 07:49:41 +01:00
Ricardo Wurmus
fdae05747c
gnu: r-sushi: Update to 1.32.0. 
* gnu/packages/bioconductor.scm (r-sushi): Update to 1.32.0.
 2022-01-06 07:49:41 +01:00
Ricardo Wurmus
76d7f23d04
gnu: r-bioassayr: Update to 1.32.1. 
* gnu/packages/bioconductor.scm (r-bioassayr): Update to 1.32.1.
 2022-01-06 07:49:41 +01:00
Ricardo Wurmus
04e2461e26
gnu: r-universalmotif: Update to 1.12.2. 
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.12.2.
 2022-01-06 07:49:41 +01:00
Ricardo Wurmus
7ab194b88c
gnu: r-cytolib: Update to 2.6.1. 
* gnu/packages/bioconductor.scm (r-cytolib): Update to 2.6.1.
 2022-01-06 07:49:41 +01:00
Ricardo Wurmus
489edb479d
gnu: r-clusterprofiler: Update to 4.2.1. 
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.2.1.
 2022-01-06 07:49:41 +01:00
Ricardo Wurmus
365f04e026
gnu: r-icobra: Update to 1.22.2. 
* gnu/packages/bioconductor.scm (r-icobra): Update to 1.22.2.
 2022-01-06 07:49:41 +01:00
Ricardo Wurmus
0be8a3e525
gnu: r-destiny: Update to 3.8.0. 
* gnu/packages/bioconductor.scm (r-destiny): Update to 3.8.0.
 2022-01-06 07:49:41 +01:00
Ricardo Wurmus
7227f93703
gnu: r-diffbind: Update to 3.4.3. 
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.4.3.
 2022-01-06 07:49:41 +01:00
Ricardo Wurmus
b8dddafa7c
gnu: r-systempiper: Update to 2.0.5. 
* gnu/packages/bioconductor.scm (r-systempiper): Update to 2.0.5.
 2022-01-06 07:49:41 +01:00
Ricardo Wurmus
013cda4abb
gnu: r-structuralvariantannotation: Update to 1.10.1. 
* gnu/packages/bioconductor.scm (r-structuralvariantannotation): Update to 1.10.1.
 2022-01-06 07:49:41 +01:00
Ricardo Wurmus
f9288cdf7c
gnu: r-genomicfeatures: Update to 1.46.3. 
* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.46.3.
 2022-01-06 07:49:41 +01:00
Ricardo Wurmus
4fc0a88a91
gnu: r-chipseeker: Update to 1.30.3. 
* gnu/packages/bioconductor.scm (r-chipseeker): Update to 1.30.3.
 2022-01-06 07:49:41 +01:00
Ricardo Wurmus
9bf3a18fb6
gnu: r-biocparallel: Update to 1.28.3. 
* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.28.3.
 2022-01-06 07:49:40 +01:00
Ricardo Wurmus
ae00bf2d5e
gnu: r-yapsa: Update to 1.20.1. 
* gnu/packages/bioconductor.scm (r-yapsa): Update to 1.20.1.
[propagated-inputs]: Remove r-pmcmr; add r-pmcmrplus.
 2022-01-06 07:49:37 +01:00
Leo Famulari
85f006c8e8
services: Document the full list of available NTP URLs. 
* gnu/services/networking.scm (%ntp-servers): List the URLs granted to us.
 2022-01-06 01:30:27 -05:00
Tobias Geerinckx-Rice
457416bb1b
gnu: godot: Remove input labels. 
* gnu/packages/game-development.scm (godot)[inputs]: Remove input labels.
[arguments]: Tweak accordingly.
 2022-01-06 06:21:31 +01:00
Tobias Geerinckx-Rice
8f90ff4cb8
gnu: godot: Update to 3.4.2. 
* gnu/packages/game-development.scm (godot): Update to 3.4.2.
[arguments]: Don't explicitly return #t from phases.
 2022-01-06 06:21:31 +01:00
Leo Famulari
aebfc1425d
gnu: linux-libre 4.4: Update to 4.4.298. 
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.298.
(linux-libre-4.4-pristine-source): Update hash.
 2022-01-05 23:39:15 -05:00
Leo Famulari
5f12ef9276
gnu: linux-libre 4.9: Update to 4.9.296. 
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.296.
(linux-libre-4.9-pristine-source): Update hash.
 2022-01-05 23:39:15 -05:00
Leo Famulari
d603ef332e
gnu: linux-libre 4.14: Update to 4.14.261. 
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.261.
(linux-libre-4.14-pristine-source): Update hash.
 2022-01-05 23:39:15 -05:00
Leo Famulari
66ea2b6a64
gnu: linux-libre 4.19: Update to 4.19.224. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.224.
(linux-libre-4.19-pristine-source): Update hash.
 2022-01-05 23:39:15 -05:00
Leo Famulari
38b9a0388d
gnu: linux-libre 5.4: Update to 5.4.170. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.170.
(linux-libre-5.4-pristine-source): Update hash.
 2022-01-05 23:39:14 -05:00
Leo Famulari
973403e613
gnu: linux-libre 5.10: Update to 5.10.90. 
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.90.
(linux-libre-5.10-pristine-source): Update hash.
 2022-01-05 23:39:14 -05:00
Leo Famulari
55fd53b0db
gnu: linux-libre: Update to 5.15.13. 
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.13.
(linux-libre-5.15-pristine-source): Update hash.
 2022-01-05 23:39:08 -05:00
Tobias Geerinckx-Rice
b18fb4bf77
gnu: snapraid: Update to 12.0. 
* gnu/packages/backup.scm (snapraid): Update to 12.0.
 2022-01-06 05:24:18 +01:00
Tobias Geerinckx-Rice
70a229aafe
gnu: snapraid: ‘Fix’ build. 
* gnu/packages/backup.scm (snapraid)[arguments]:
Remove "--enable-valgrind" from #:configure-flags.
[native-inputs]: Remove valgrind.
 2022-01-06 05:24:18 +01:00
Tobias Geerinckx-Rice
e3c9860ab9
gnu: snapraid: Use G-expressions. 
* gnu/packages/backup.scm (snapraid)[arguments]:
Rewrite as G-expressions.
 2022-01-06 05:24:18 +01:00
Tobias Geerinckx-Rice
4f488fb545
gnu: wimlib: Update to 1.13.5. 
* gnu/packages/backup.scm (wimlib): Update to 1.13.5.
 2022-01-06 05:24:17 +01:00
Tobias Geerinckx-Rice
38ee3d616d
gnu: borgmatic: Use G-expressions. 
* gnu/packages/backup.scm (borgmatic)[arguments]:
Rewrite as G-expressions.
 2022-01-06 05:24:17 +01:00
Tobias Geerinckx-Rice
2c9bc8408e
gnu: borgmatic: Update to 1.5.22. 
* gnu/packages/backup.scm (borgmatic): Update to 1.5.22.
 2022-01-06 05:24:17 +01:00
Tobias Geerinckx-Rice
1326b36073
gnu: pan: Use G-expressions. 
* gnu/packages/mail.scm (pan)[arguments]:
Rewrite as G-expressions.
 2022-01-06 05:24:17 +01:00
Tobias Geerinckx-Rice
0d78ac083a
gnu: pan: Update to 0.149. 
* gnu/packages/mail.scm (pan): Update to 0.149.
[arguments]: Don't explicitly return #t from phases.
[inputs]: Upgrade gmime-2.6 to gmime.
 2022-01-06 05:24:17 +01:00