* guix/tests.scm (file=?): Add optional 'stat' parameter. Add fast
patch comparing inode numbers.
* tests/gexp.scm ("imported-files with file-like objects"): Remove
'file=?' procedure and use the one from (guix tests).
Fixes <https://issues.guix.gnu.org/51487>
* gnu/services/ssh.scm (extend-openssh-authorized-keys): ensure that no key is forgotten.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
This commit breaks building guix home
guix home: error: reference to invalid output 'out' of derivation \
'/gnu/store/86zc4rijsswmfqnaq8rwixcxjl2zyl1c-on-first-login.drv'
This reverts commit 4dcec60fa6.
With thanks to jlicht on IRC:
sbcl-package->cl-source-package assumes all inputs are packages
which isn't the case here.
This reverts commit e31d48d8db.
Julia's built-in package manager (Pkg) looks for packages in
JULIA_DEPOT_PATH/packages/PACKAGENAME/XXXX, where XXXX is a string
encoding package UUID and SHA1 of files. The link-depot phase creates
a link at the correct location to allow Pkg to find packages that were
already installed by Guix.
* guix/build/julia-build-system.scm (link-depot): New phase.
(%package-path): Modified package path from packages/ to loadpath/.
(project.toml->uuid): New procedure, retrive package uuid from TOML file.
(precompile, check): Adjust to the change in paths.
(%standard-phases): Add link-depot phase.
(julia-build): Add julia-package-uuid keyword.
* guix/build-system/julia.scm (julia-build): Also use the
julia-package-uuid keyword.
* gnu/packages/julia-jll.scm (julia-bzip2-jll, julia-cairo-jll,
julia-compilersupportlibraries-jll, julia-expat-jll, julia-ffmpeg-jll,
julia-fontconfig-jll, julia-freetype2-jll, julia-fribidi-jll,
julia-gettext-jll, julia-glib-jll, julia-gr-jll, julia-gumbo-jll,
julia-imagemagick-jll, julia-jllwrappers-jll, julia-jpegturbo-jll,
julia-lame-jll, julia-libass-jll, julia-libfdk-aac-jll,
julia-libffi-jll, julia-libgcrypt-jll, julia-libglvnd-jll,
julia-libgpg-error-jll, juli-libiconv-jll, julia-libmount-jll,
julia-libpng-jll, julia-libsass-jll, julia-libtiff-jll,
julia-libuuid-jll, julia-libvorbis-jll, julia-lzo-jll,
julia-mbedtls-jll, julia-ogg-jll, julia-openspecfun-jll,
julia-openssl-jll, julia-opus-jll, julia-pcre-jll, julia-pixman-jll,
julia-qt5base-jll, julia-wayland-jll, julia-wayland-protocols-jll,
julia-x264-jll, julia-x265-jll, julia-xkbcommon-jll, julia-xml2-jll,
julia-xorg-libpthread-stubs-jll, julia-xorg-libx11-jll,
julia-xorg-libxau-jll, julia-xorg-libxcb-jll, julia-xorg-libxcursor-jll,
julia-xorg-libxdmcp-jll, julia-xorg-libxext-jll,
julia-xorg-libxfixes-jll, julia-xorg-libxi-jll,
julia-xorg-libxinerama-jll, julia-xorg-libxkbfile-jll,
julia-xorg-libxrandr-jll, julia-xorg-libxrender-jll,
julia-xorg-xcb-util-jll, julia-xorg-xcb-util-keysyms-jll,
julia-xorg-xcb-util-renderutil-jll, julia-xorg-xcb-util-wm-jll,
julia-xorg-xkbcomp-jll, julia-xorg-xkeyboard-config-jll,
julia-xorg-xtrans-jll, julia-xslt-jll, julia-zlib-jll, julia-zstd-jll)
[argument]: Adjust the order of the phases to the change in the
julia-build-system.
* gnu/packages/julia-xyz.scm (julia-bufferedstreams, julia-calculus,
julia-dataframes, julia-datavalues, julia-distances, julia-documenter,
julia-dualnumbers, julia-ellipsisnotation, julia-expronicon,
julia-fileio, julia-fixedpointnumbers, julia-functionwrappers,
julia-fuzzycompletions, julia-genericlinearalgebra, julia-genericschur,
julia-geometrybasics, julia-imagemagick, julia-infinity,
julia-matrixfactorizations, julia-media, julia-missings, julia-nnlib,
julia-optimtestproblems, julia-orderedcollections, julia-prettytables,
julia-pycall, julia-quadmath, julia-safetests, julia-stackviews)
[arguments]: Correct paths to reflect change of %package-path modify
order of phases as link-depot needs to run on an unmodified src
directory add package-name-uuid keyword argument to packages without
Project.toml file.
* gnu/packages/julia.scm (julia)[native-search-paths]: Correct paths to
reflect change of %package-path modify order of phases as link-depot
needs to run on an unmodified src directory.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
Upstream raised these back in 2019 with CUPS 2.3.0.
* gnu/services/cups.scm (<cups-configuration>): Raise default
‘multiple-operation-timeout’ and ‘timeout’ from 300 to 900 seconds.
* doc/guix.texi (Printing Services): Adjust accordingly.
* gnu/packages/node.scm (node-lts): Update to 14.18.1.
[native-inputs]: Replace c-ares with c-ares-for-node.
[inputs]: Replace c-ares with c-ares-for-node.
Includes fixes for CVE-2021-22918, CVE-2021-22930, CVE-2021-22931,
CVE-2021-22939, and CVE-2021-22940.
LLVM bundled in the binary julia distributed by upstream has its
version with a "jl" suffix. The llvm-julia package does not have
this suffix, which causes some packages (e. g. LLVM.jl) to fail to
load.
LLVM.jl does this in order to be sure that it is loading a LLVM as
patched for julia and not LLVM from the distribution which will
lack the correct patches on distribs other than GUIX.
I guess there might be other packages that rely on this, so we
should fix our llvm-julia package.
* gnu/packages/julia.scm (llvm)
[source]: Add missing upstream patch
[arguments]: Add configure-flag to set a "jl" suffix to llvm version
(julia)[arguments]: Symlink llvm to llvm-11jl.so
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
