guix/gnu/packages
Arun Isaac 713dadf47e
gnu: fastahack: Use G-expressions.
* gnu/packages/bioinformatics.scm (fastahack)[arguments]: Rewrite
using G-expressions. Do not return #t from custom phases.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2022-05-09 11:17:51 +03:00
..
aux-files gnu: Remove linux-libre@4.4 configuration files. 2022-05-01 02:00:00 +02:00
patches gnu: emacs-git-email: Fixes build of package. 2022-05-09 00:07:31 +02:00
abduco.scm
abiword.scm
accessibility.scm
acct.scm
acl.scm
ada.scm
admin.scm gnu: libcap-ng: Omit static libraries. 2022-05-01 02:00:08 +02:00
adns.scm
agda.scm
aidc.scm
algebra.scm gnu: cm: Update to 0.4.0. 2022-05-05 16:10:16 +02:00
android.scm
animation.scm
anthy.scm
antivirus.scm
apl.scm gnu: apl: Use G-expressions. 2022-05-02 15:14:44 +02:00
apr.scm
arcan.scm
aspell.scm gnu: ispell: Update to 3.4.05. 2022-05-01 02:00:20 +02:00
assembly.scm gnu: fasm: Update to 1.73.30. 2022-05-01 02:00:00 +02:00
astronomy.scm
attr.scm
audio.scm gnu: carla: Prepare for cross-compilation. 2022-05-01 02:00:07 +02:00
augeas.scm
authentication.scm
autogen.scm
autotools.scm gnu: libtool: Add 2.4.7. 2022-04-01 18:01:06 +02:00
avahi.scm
avr-xyz.scm
avr.scm
axoloti.scm
backup.scm gnu: Add grsync. 2022-04-26 09:24:08 +02:00
barrier.scm
base.scm
bash.scm
batik.scm
bdw-gc.scm
benchmark.scm gnu: fio: Use G-expressions. 2022-05-01 02:00:08 +02:00
bioconductor.scm gnu: Add r-agimicrorna. 2022-05-02 15:23:50 +02:00
bioinformatics.scm gnu: fastahack: Use G-expressions. 2022-05-09 11:17:51 +03:00
bison.scm
bittorrent.scm
boost.scm
bootloaders.scm gnu: u-boot-rockpro64-rk3399: Add support for booting from SCSI/SATA. 2022-04-05 12:05:28 -07:00
bootstrap.scm
browser-extensions.scm gnu: uBlock Origin: Update to 1.42.4. 2022-04-07 23:12:44 +02:00
build-tools.scm gnu: bear: Update to 3.0.19. 2022-05-02 15:14:45 +02:00
busybox.scm
c.scm gnu: byacc: Update to 20220128. 2022-05-09 00:07:31 +02:00
calcurse.scm
calendar.scm
ccache.scm gnu: ccache: Update to 4.6. 2022-04-17 17:59:23 +03:00
cdrom.scm
cedille.scm
certs.scm gnu: nss-certs: Support cross-compilation. 2022-04-18 22:58:06 +02:00
check.scm
chemistry.scm
chez.scm
chicken.scm
chromium.scm gnu: ungoogled-chromium: Update to 101.0.4951.54-1. 2022-05-03 22:35:12 +02:00
ci.scm
cinnamon.scm
clojure.scm
cluster.scm
cmake.scm
cobol.scm
code.scm
commencement.scm git-download: Set locale to deal with Unicode in git metadata. 2022-04-20 23:46:43 +02:00
compression.scm gnu: plzip: Update to 1.10. 2022-05-01 02:00:20 +02:00
compton.scm
configuration-management.scm
conky.scm
connman.scm
containers.scm
convmv.scm
cook.scm
coq.scm gnu: coq: Update to 8.15.1. 2022-05-01 13:14:57 +02:00
cpio.scm
cpp.scm gnu: aws-sdk-cpp: Remove openssl input. 2022-05-02 15:14:43 +02:00
cppi.scm
cran.scm gnu: Add r-orgmassspecr. 2022-05-02 15:17:28 +02:00
crates-graphics.scm
crates-gtk.scm
crates-io.scm gnu: Add rust-page-size-0.4. 2022-05-06 15:34:31 +02:00
cross-base.scm
crypto.scm gnu: Add rust-blake3-1. 2022-05-06 23:13:29 +02:00
cryptsetup.scm
cups.scm gnu: epson-inkjet-printer-escpr: Use new style. 2022-05-01 02:00:18 +02:00
curl.scm gnu: curlie: Update to 1.6.9 2022-04-05 20:41:39 +02:00
cvassistant.scm
cybersecurity.scm
cyrus-sasl.scm
databases.scm gnu: Add python-databases. 2022-05-06 10:15:04 +02:00
datamash.scm
datastructures.scm gnu: sdsl-lite: Adjust inputs. 2022-03-28 21:34:08 +03:00
dav.scm gnu: radicale: Update to 3.1.5. 2022-04-03 12:49:07 +02:00
dbm.scm
dc.scm
debian.scm
debug.scm
dejagnu.scm
dezyne.scm gnu: dezyne: Use new package style. 2022-05-06 15:56:11 +02:00
dhall.scm
dico.scm
dictionaries.scm
diffoscope.scm gnu: reprotest: Update to 0.7.20. 2022-04-08 15:32:34 -07:00
digest.scm
direct-connect.scm
disk.scm gnu: lf: Remove input labels. 2022-05-09 00:07:32 +02:00
display-managers.scm
distributed.scm
django.scm gnu: python-django@2.2: Update to 2.2.28 [fixes CVE-2022-2834]. 2022-04-11 15:21:53 +02:00
djvu.scm
dlang.scm
dns.scm gnu: nsd: Update to 4.4.0. 2022-05-01 02:00:19 +02:00
docbook.scm
docker.scm gnu: docker-compose: Use python-pyyaml@5. 2022-04-27 23:23:44 +02:00
documentation.scm
dunst.scm
dvtm.scm
easyrpg.scm
ebook.scm
ed.scm
education.scm
efi.scm
electronics.scm gnu: openboardview: Do not recursively clone source. 2022-03-28 13:52:45 -04:00
elf.scm
elixir.scm
elm.scm
emacs-xyz.scm gnu: emacs-modus-themes: Update to 2.3.2. 2022-05-09 00:07:34 +02:00
emacs.scm
embedded.scm
emulators.scm gnu: Fix input typoes. 2022-04-19 17:46:48 +03:00
enchant.scm
engineering.scm gnu: Add xschem. 2022-05-02 18:03:06 +02:00
enlightenment.scm
entr.scm
erlang.scm
esolangs.scm
fabric-management.scm
fcitx.scm
fcitx5.scm gnu: Add fcitx5-gtk4. 2022-04-04 22:58:02 +02:00
figlet.scm
file-systems.scm gnu: zfs: Update to 2.1.4. 2022-04-26 11:02:17 +02:00
file.scm
finance.scm gnu: monero-gui: Update to 0.17.3.2. 2022-05-06 15:08:41 +02:00
firmware.scm
flashing-tools.scm
flex.scm
fltk.scm
fonts.scm gnu: font-iosevka: Update to 15.2.0. 2022-05-09 00:07:32 +02:00
fontutils.scm gnu: woff2: Propagate brotli. 2022-04-12 23:18:12 -04:00
forth.scm
fpga.scm gnu: iverilog: Add zlib dependency for LXT dump file format support. 2022-03-31 18:22:58 +03:00
freedesktop.scm gnu: libfprint: Fix build, add python for the tests. 2022-04-14 11:54:11 +02:00
freeipmi.scm gnu: freeipmi: Fix cross-compiling. 2022-03-28 21:34:08 +03:00
fribidi.scm
ftp.scm
fvwm.scm
game-development.scm gnu: libtcod: Remove trailing boolean. 2022-04-19 12:29:44 +02:00
games.scm gnu: Add Liquid War 6. 2022-04-29 23:14:45 +02:00
gawk.scm
gcal.scm
gcc.scm gnu: gcc-11: Update to 11.3.0. 2022-05-09 11:02:14 +03:00
gd.scm
gdb.scm
genealogy.scm
genimage.scm gnu: genimage: Update to 15. 2022-04-11 14:48:35 -07:00
geo.scm
gettext.scm
ghostscript.scm
gimp.scm
gkrellm.scm
gl.scm
glib.scm
gnome-xyz.scm gnu: gnome-shell-extension-blur-my-shell: Update to 29. 2022-05-09 00:07:32 +02:00
gnome.scm gnu: komikku: Update to 0.38.0. 2022-04-19 20:28:01 +02:00
gnu-doc.scm
gnu-pw-mgr.scm
gnucash.scm gnu: gnucash: Update to 4.10. 2022-04-17 05:03:00 -04:00
gnunet.scm gnu: gnunet: Update to 0.16.3. 2022-04-01 18:01:07 +02:00
gnupg.scm
gnustep.scm
gnuzilla.scm gnu: icedove: Update to 91.9.0 [fixes CVE-2022-1520]. 2022-05-05 23:09:48 +02:00
gobby.scm
golang.scm gnu: go-github-com-spf13-cobra: Update to 1.4.0. 2022-04-23 11:30:45 -04:00
gperf.scm
gpodder.scm
gps.scm gnu: gama: Update to 2.19. 2022-04-29 01:47:48 +03:00
graph.scm gnu: python-igraph: Update to 0.9.10. 2022-04-14 22:57:49 +03:00
graphics.scm gnu: mangohud: Update to 0.6.7. 2022-05-09 09:58:25 +02:00
graphviz.scm
groff.scm
groovy.scm
gsasl.scm
gstreamer.scm gnu: Fix input typoes. 2022-04-19 17:46:48 +03:00
gtk.scm gnu: gtkmm: Update to 4.6.1. 2022-04-04 22:58:02 +02:00
guile-wm.scm
guile-xyz.scm gnu: guile-srfi-189: Build from upstream sources. 2022-04-26 09:20:04 +02:00
guile.scm
gv.scm
gxmessage.scm
hardware.scm gnu: Add envytools. 2022-04-29 18:07:16 +02:00
haskell-apps.scm gnu: git-annex: Update to 10.20220504. 2022-05-09 11:02:11 +03:00
haskell-check.scm
haskell-crypto.scm
haskell-web.scm gnu: Add ghc-http-client-restricted. 2022-03-29 12:53:26 -04:00
haskell-xyz.scm
haskell.scm
heads.scm
hexedit.scm
hugs.scm
hunspell.scm
hurd.scm
hyperledger.scm
i2p.scm
ibus.scm
icu4c.scm
idris.scm gnu: idris: Update to 1.3.4. 2022-04-20 08:35:48 -05:00
idutils.scm
image-processing.scm gnu: Add bart. 2022-04-26 16:50:32 +02:00
image-viewers.scm gnu: ytfzf: Update to 2.3. 2022-05-06 10:32:06 +02:00
image.scm
imagemagick.scm
inklingreader.scm
inkscape.scm
installers.scm
instrumentation.scm
ipfs.scm
irc.scm gnu: weechat: Update to 3.5. 2022-03-30 20:52:14 +03:00
irods.scm
iso-codes.scm
jami.scm
java-compression.scm
java-graphics.scm
java-maths.scm
java.scm gnu: openjdk17: Update to 17.0.2 2022-05-07 11:22:19 +02:00
javascript.scm
jemalloc.scm
jose.scm
jrnl.scm
julia-jll.scm
julia-xyz.scm
julia.scm
jupyter.scm gnu: Add python-ipydatawidgets. 2022-05-06 13:02:59 +02:00
kawa.scm
kde-frameworks.scm gnu: pulseaudio-qt: Use mirror URI. 2022-03-29 14:43:20 +03:00
kde-internet.scm
kde-multimedia.scm gnu: kwave: Build with librsvg-for-system. 2022-04-19 17:46:41 +03:00
kde-pim.scm gnu: kmessagelib: Fix building. 2022-04-19 20:05:01 +03:00
kde-plasma.scm
kde-systemtools.scm
kde-utils.scm
kde.scm gnu: marble-qt: Update to 21.12.3. 2022-04-04 10:50:21 +02:00
kerberos.scm
key-mon.scm
kodi.scm
language.scm
ld-wrapper.in
lean.scm
lego.scm
less.scm
lesstif.scm
libbsd.scm
libcanberra.scm
libdaemon.scm
libedit.scm
libevent.scm
libffcall.scm
libffi.scm
libftdi.scm
libidn.scm
libphidget.scm
libreoffice.scm
libsigsegv.scm
libunistring.scm
libunwind.scm
libusb.scm
license.scm
lighting.scm
linphone.scm
linux.scm gnu: rasdaemon: Update to 0.6.8. 2022-05-01 02:00:19 +02:00
lirc.scm
lisp-check.scm
lisp-xyz.scm gnu: Add cl-formgrep. 2022-04-25 10:09:03 +02:00
lisp.scm gnu: janet: Update to 1.21.1. 2022-04-18 23:09:39 +02:00
llvm.scm gnu: llvm-3: Fix build. 2022-04-10 19:22:43 +02:00
logging.scm gnu: spdlog: Update to 1.10.0. 2022-05-02 15:14:45 +02:00
logo.scm
loko.scm
lout.scm
lsof.scm gnu: lsof: Fix invalid G-Expression. 2022-04-08 23:59:48 +02:00
lua.scm
lxde.scm
lxqt.scm
m4.scm
machine-learning.scm gnu: python-hmmlearn: Remove cythonized file. 2022-04-15 02:11:03 +03:00
magic-wormhole.scm
mail.scm gnu: Mutt: Update to 2.2.4. 2022-05-02 19:31:42 -04:00
make-bootstrap.scm
man.scm
markup.scm
marst.scm
mastodon.scm
mate.scm gnu: mate-polkit: Improve synopsis. 2022-04-03 12:42:18 +02:00
maths.scm gnu: Add n2p2. 2022-05-05 23:56:58 +02:00
matrix.scm
maven-parent-pom.scm
maven.scm
mc.scm
mcrypt.scm
medical.scm
mercury.scm gnu: mercury: Selectively import match-lambda from ice9 module. 2022-04-27 22:34:35 -04:00
mes.scm gnu: mescc-tools: Update supported-systems. 2022-05-06 14:39:45 +02:00
messaging.scm gnu: nheko: Update to 0.9.3. 2022-04-19 12:11:08 +02:00
microcom.scm
minetest.scm
mingw.scm
moe.scm
monitoring.scm gnu: Zabbix: Update to 6.0.3. 2022-04-09 16:09:50 +02:00
mono.scm
moreutils.scm
motti.scm
mp3.scm gnu: eyeD3: Update to 0.9.6. 2022-04-04 19:57:12 -04:00
mpd.scm
mpi.scm gnu: openmpi: Remove trailing #t. 2022-04-11 15:49:33 +02:00
mtools.scm
multiprecision.scm
music.scm gnu: gsequencer: Update to 3.18.2. 2022-04-20 23:40:44 -03:00
musl.scm
myrddin.scm
nano.scm
ncdu.scm gnu: ncdu-2: Update to 2.1.2. 2022-05-06 14:36:07 +03:00
ncurses.scm gnu: Add ncurses-with-tinfo. 2022-04-05 12:05:19 -07:00
netpbm.scm
nettle.scm
networking.scm gnu: nethogs: Update to 0.8.7. 2022-04-26 09:30:53 +02:00
nfs.scm
nickle.scm
nicotine.scm
nim.scm
ninja.scm
node-xyz.scm
node.scm
notcurses.scm
noweb.scm
nss.scm
ntp.scm gnu: ntp: Support cross-compilation. 2022-04-18 22:57:18 +02:00
nutrition.scm
nvi.scm
ocaml.scm gnu: ocaml-cmdliner: Update to 1.1.1. 2022-05-07 08:16:31 +02:00
ocr.scm
onc-rpc.scm
openbox.scm
opencl.scm
opencog.scm
openkinect.scm
openldap.scm
openpgp.scm
openstack.scm
orange.scm
orpheus.scm
ots.scm
package-management.scm gnu: nar-herder: Update to 0-6.ea997c6. 2022-05-06 14:38:52 +01:00
pantheon.scm gnu: pantheon-calculator: Update to 1.7.2. 2022-04-05 20:41:40 +02:00
parallel.scm gnu: slurm: Add 21.08.8. 2022-05-06 10:32:05 +02:00
pascal.scm
password-utils.scm gnu: keepassxc: Update to 2.7.1. 2022-04-06 23:31:22 +03:00
patchutils.scm
patool.scm
pciutils.scm
pcre.scm
pdf.scm
pem.scm
pep.scm
perl-check.scm
perl-compression.scm
perl-maths.scm
perl-web.scm
perl.scm
perl6.scm
phabricator.scm
photo.scm gnu: enblend-enfuse: Fix build. 2022-05-01 02:00:17 +02:00
php.scm
piet.scm
pikchr.scm gnu: Add pikchr. 2022-04-20 23:46:45 +02:00
pkg-config.scm
plan9.scm
plotutils.scm gnu: asymptote: Update to 2.80. 2022-04-19 12:29:43 +02:00
poedit.scm
polkit.scm
popt.scm
presentation.scm
pretty-print.scm gnu: fmt: Update to 8.1.1. 2022-05-02 15:14:44 +02:00
printers.scm
profiling.scm
prolog.scm
protobuf.scm
pth.scm
pulseaudio.scm
pumpio.scm
pure.scm
purescript.scm
pv.scm
python-build.scm
python-check.scm gnu: Add python-sybil. 2022-05-02 15:14:45 +02:00
python-compression.scm
python-crypto.scm
python-science.scm gnu: python-vedo: Update to 2022.2.0. 2022-05-06 15:23:06 +02:00
python-web.scm gnu: Add python-scrapy. 2022-05-02 15:14:46 +02:00
python-xyz.scm gnu: Add python-style. 2022-05-09 09:35:29 +02:00
python.scm
qt.scm
racket.scm
radio.scm gnu: flrig: Update to 1.4.05. 2022-05-07 13:50:27 +02:00
ragel.scm
rails.scm
raspberry-pi.scm
ratpoison.scm
rcm.scm
rdesktop.scm
rdf.scm
re2c.scm
readline.scm
rednotebook.scm
regex.scm
robotics.scm
rocm.scm
rpc.scm
rpm.scm
rrdtool.scm
rsync.scm
ruby.scm gnu: Add ruby-asciidoctor-multipage. 2022-05-09 00:07:32 +02:00
rush.scm
rust-apps.scm
rust.scm
sagemath.scm
samba.scm
sawfish.scm
scanner.scm
scheme.scm
screen.scm
scribus.scm
scsi.scm
sdl.scm
search.scm gnu: ugrep: Update to 3.7.9. 2022-05-02 15:14:44 +02:00
security-token.scm gnu: libfido2: Fix cross-compilation. 2022-03-31 18:57:05 +03:00
selinux.scm
sequoia.scm
serialization.scm
serveez.scm
shells.scm gnu: zsh: Build and install info pages. 2022-04-29 18:07:16 +02:00
shellutils.scm
simh.scm
simulation.scm gnu: fenics: Fix sanity check. 2022-05-06 15:23:06 +02:00
skarnet.scm
skribilo.scm
slang.scm
smalltalk.scm
sml.scm gnu: polyml: Update to 5.9. 2022-04-19 18:07:49 +02:00
solidity.scm
speech.scm
sphinx.scm
spice.scm
spreadsheet.scm
sqlite.scm
squirrel.scm
ssh.scm gnu: openssh: Trust Guix store directory 2022-04-29 00:33:53 +02:00
sssd.scm
stalonetray.scm
statistics.scm gnu: r-rlrsim: Update to 3.1-8. 2022-04-12 16:00:01 +02:00
stb.scm
stenography.scm
storage.scm
suckless.scm
swig.scm
sync.scm
syncthing.scm
syndication.scm gnu: gfeeds: Make it start. 2022-04-26 11:07:51 +02:00
synergy.scm
task-management.scm gnu: Add worklog. 2022-04-27 11:23:09 +02:00
task-runners.scm
tbb.scm
tcl.scm gnu: tcl-tls: Use a gexp. 2022-05-06 15:23:07 +02:00
telegram.scm
telephony.scm
terminals.scm gnu: cool-retro-term: Lint package definition. 2022-05-09 00:07:31 +02:00
terraform.scm
tex.scm
texinfo.scm
text-editors.scm gnu: Add tree-sitter. 2022-03-29 11:56:49 +02:00
textutils.scm
time.scm
tls.scm gnu: s2n: Link to aws-lc as libcrypto dependency. 2022-05-02 15:14:43 +02:00
tmux.scm
toolkits.scm
tor.scm gnu: tor: Only run sandbox tests on some architectures. 2022-05-08 12:53:52 +03:00
toys.scm
tryton.scm
tv.scm
uglifyjs.scm
uml.scm gnu: plantuml: Update to 1.2022.3. 2022-03-31 17:52:19 +03:00
unicode.scm
unrtf.scm
upnp.scm
usb-modeswitch.scm
uucp.scm
valgrind.scm
version-control.scm gnu: libgit2: Work around time-dependent unit test. 2022-05-09 00:07:31 +02:00
video.scm gnu: shotcut: Update to 22.04.25. 2022-04-27 00:42:14 -03:00
vim.scm gnu: vim: Update to 8.2.4912. 2022-05-08 12:03:18 +03:00
virtualization.scm gnu: ganeti: Update to 3.0.2. 2022-04-09 14:27:43 +02:00
vlang.scm
vnc.scm
vpn.scm
vulkan.scm
w3m.scm
wdiff.scm
weather.scm
web-browsers.scm gnu: links: Use gexps. 2022-05-06 14:36:08 +03:00
web.scm gnu: nginx-lua-module: Fix builder. 2022-04-25 18:34:19 +01:00
webkit.scm gnu: wpewebkit: Update to 2.36.0. 2022-04-12 23:18:12 -04:00
wget.scm
wicd.scm
wine.scm
wireservice.scm
wm.scm gnu: Add Avizo. 2022-04-29 00:42:08 +02:00
wordnet.scm
wv.scm
wxwidgets.scm
xdisorg.scm gnu: Add Avizo. 2022-04-29 00:42:08 +02:00
xfce.scm gnu: xfce4-panel: Update to 4.16.4. 2022-04-26 09:30:41 +02:00
xfig.scm
xiph.scm gnu: libshout: Update to 2.4.6. 2022-05-01 02:00:19 +02:00
xml.scm gnu: python-lxml: Add 4.7.1. 2022-04-15 19:13:01 +02:00
xnee.scm
xorg.scm gnu: xterm: Make big cursors work. 2022-04-03 13:46:15 +02:00
zig.scm gnu: LLVM, Clang: Add 14.0.0. 2022-04-07 23:12:44 +02:00
zile.scm
zwave.scm