guix/gnu/packages
Ricardo Wurmus 906c79d1a3
gnu: r-rhdf5: Update to 2.32.3.
* gnu/packages/bioinformatics.scm (r-rhdf5): Update to 2.32.3.
2020-10-06 13:23:38 +02:00
..
aux-files self: Use a 'guile' that doesn't complain about locales. 2020-10-05 23:19:19 +02:00
patches gnu: lsh: Fix X11 forwarding. 2020-10-05 23:48:45 -04:00
abduco.scm gnu: abduco: Use cc-for-target. 2020-09-24 17:18:42 +03:00
abiword.scm
accessibility.scm gnu: xmagnify: Use cc-for-target. 2020-09-24 17:17:08 +03:00
acct.scm
acl.scm
ada.scm
admin.scm gnu: facter: Update to 4.0.41. 2020-10-03 23:00:21 +02:00
adns.scm
agda.scm
aidc.scm
algebra.scm gnu: Fix package references. 2020-09-30 09:28:26 +03:00
android.scm
animation.scm
anthy.scm
antivirus.scm gnu: clamav: Update to 0.103.0. 2020-10-03 23:00:21 +02:00
apl.scm
apr.scm
arcan.scm
aspell.scm
assembly.scm
astronomy.scm gnu: stellarium: Update to 0.20.3. 2020-10-01 00:13:42 +02:00
attr.scm
audio.scm gnu: Fix package references. 2020-09-30 09:28:26 +03:00
augeas.scm
authentication.scm
autogen.scm
autotools.scm
avahi.scm
avr.scm
axoloti.scm gnu: axoloti-patcher-next: Fix directory names. 2020-10-03 00:04:43 +02:00
backup.scm gnu: dump: Fix typo in description. 2020-09-15 20:59:15 +02:00
base.scm
bash.scm
batik.scm
bdw-gc.scm
benchmark.scm gnu: fio: Update to 3.23. 2020-09-15 14:57:07 +02:00
bioconductor.scm gnu: r-bgx: Update to 1.54.1. 2020-10-06 13:23:38 +02:00
bioinformatics.scm gnu: r-rhdf5: Update to 2.32.3. 2020-10-06 13:23:38 +02:00
bison.scm
bittorrent.scm
boost.scm
bootloaders.scm gnu: u-boot: Reomve sdl2 dependency on non-GUI builds. 2020-09-19 23:02:51 +02:00
bootstrap.scm
build-tools.scm
busybox.scm
c.scm gnu: Fix up package copyright headers. 2020-10-06 02:54:02 +02:00
calcurse.scm
calendar.scm
ccache.scm gnu: ccache: Update to 3.7.12. 2020-10-03 00:22:59 +02:00
cdrom.scm
cedille.scm
certs.scm
check.scm gnu: catch2: Update to 2.13.1. 2020-10-03 23:00:21 +02:00
chemistry.scm
chez.scm
chicken.scm gnu: Fix package references. 2020-09-30 09:28:26 +03:00
chromium.scm
ci.scm gnu: cuirass: Update to 0.0.1-50.71aac24. 2020-10-03 15:14:43 +02:00
cinnamon.scm
clojure.scm
cluster.scm
cmake.scm
cobol.scm
code.scm gnu: lcov: Update to 1.15. 2020-09-23 04:36:36 +02:00
commencement.scm gnu: nyacc: Add 1.03.0. 2020-09-25 23:26:22 +02:00
compression.scm gnu: lzlib: Don't build static library. 2020-09-26 23:07:03 +02:00
compton.scm
configuration-management.scm
conky.scm gnu: Fix package references. 2020-09-30 09:28:26 +03:00
connman.scm
convmv.scm
cook.scm
coq.scm
cpio.scm
cpp.scm gnu: xtl: Update to 0.6.19. 2020-10-01 00:13:42 +02:00
cppi.scm
cran.scm gnu: r-seurat: Update to 3.2.2. 2020-10-06 00:35:01 +02:00
crates-graphics.scm gnu: Move graphics crates to crates-graphics.scm. 2020-10-05 13:39:07 +03:00
crates-gtk.scm gnu: Move graphics crates to crates-graphics.scm. 2020-10-05 13:39:07 +03:00
crates-io.scm gnu: rust-time-0.1: Update to 0.1.43. 2020-10-05 23:00:20 +02:00
cross-base.scm
crypto.scm gnu: signify: Update to 30. 2020-10-01 00:13:41 +02:00
cryptsetup.scm gnu: cryptsetup: Update to 2.3.4. 2020-09-15 20:59:15 +02:00
cups.scm gnu: hplip: Update to 3.20.9 [security fixes]. 2020-10-04 14:35:18 +02:00
curl.scm
cvassistant.scm
cybersecurity.scm
cyrus-sasl.scm
databases.scm gnu: mariadb-connector-c: Update to 3.1.10. 2020-10-03 00:22:59 +02:00
datamash.scm
datastructures.scm gnu: gdsl: Replace 'url-fetch' by 'git-fetch'. 2020-09-21 23:12:45 +02:00
dav.scm
dbm.scm
dc.scm
debian.scm
debug.scm
dejagnu.scm
dhall.scm
dico.scm gnu: dico: Update to 2.10. 2020-09-15 23:36:42 +02:00
dictionaries.scm gnu: grammalecte: Update to 1.12.2. 2020-09-17 14:10:43 +02:00
diffoscope.scm gnu: Fix package references. 2020-09-30 09:28:26 +03:00
digest.scm
direct-connect.scm
disk.scm gnu: memkind: Declare a source file-name. 2020-10-06 13:45:35 +03:00
display-managers.scm
distributed.scm
django.scm gnu: Fix typoes in package descriptions. 2020-09-23 04:37:01 +02:00
djvu.scm
dlang.scm
dns.scm gnu: knot: Remove obsolete configure flag. 2020-10-05 18:23:06 +02:00
docbook.scm
docker.scm gnu: docker: Compile with seccomp enabled. 2020-09-21 13:18:25 +03:00
documentation.scm gnu: Fix typoes in package descriptions. 2020-09-23 04:37:01 +02:00
drones.scm
dunst.scm
dvtm.scm
easyrpg.scm gnu: easyrpg-player: Update to 0.6.2.2. 2020-09-17 14:10:42 +02:00
ebook.scm gnu: cozy: Update to 0.7.2. 2020-10-01 00:13:42 +02:00
ed.scm
education.scm gnu: snap: Update to 6.2.1. 2020-09-29 14:06:25 +02:00
efi.scm
electronics.scm
elf.scm
elixir.scm Revert "gnu: elixir: Remove unused input." 2020-10-03 22:10:15 +02:00
elm.scm
emacs-xyz.scm gnu: Add emacs-python-black. 2020-10-06 11:39:57 +02:00
emacs.scm gnu: emacs-next: Fix load path and version. 2020-10-01 11:03:56 -04:00
embedded.scm
emulators.scm gnu: mame: Update to 0.225. 2020-10-03 16:51:08 +02:00
enchant.scm
engineering.scm gnu: pcb-rnd: Update to 2.2.4. 2020-10-01 00:13:42 +02:00
enlightenment.scm gnu: evisum: Build translations. 2020-09-23 15:23:18 +03:00
entr.scm
erlang.scm
fabric-management.scm
fcitx.scm
figlet.scm
file-systems.scm gnu: mergerfs-tools: Update to 480296e. 2020-10-05 10:42:00 +02:00
file.scm
finance.scm gnu: monero-gui: Update to 0.17.0.1. 2020-10-05 10:01:28 +02:00
firmware.scm
flashing-tools.scm
flex.scm
fltk.scm
fonts.scm gnu: font-jetbrains-mono: Simplify licence installation. 2020-10-04 14:24:00 +02:00
fontutils.scm gnu: libspiro: Replace with 20200505 [fixes CVE-2019-19847]. 2020-09-28 00:46:21 +02:00
forth.scm
fpga.scm
freedesktop.scm gnu: wev: Use version tag instead of commit. 2020-09-29 22:53:36 +02:00
freeipmi.scm
fribidi.scm
ftp.scm
fvwm.scm
game-development.scm gnu: godot: Update to 3.2.3. 2020-10-04 14:24:00 +02:00
games.scm gnu: stockfish: Fix typo in description. 2020-10-06 11:02:47 +02:00
gawk.scm
gcal.scm
gcc.scm
gd.scm
gdb.scm
genealogy.scm
genimage.scm
geo.scm gnu: josm: Update to 17013. 2020-10-03 16:50:23 +02:00
gettext.scm gnu: gettext-minimal: Mark "test-raise" test XFAIL on the Hurd. 2020-10-05 12:01:47 +02:00
ghostscript.scm
gimp.scm
gkrellm.scm
gl.scm
glib.scm gnu: libsigc++: Remove duplicate definition. 2020-10-05 14:10:00 +03:00
gnome-xyz.scm gnu: Fix typoes in package descriptions. 2020-09-23 04:37:01 +02:00
gnome.scm gnu: seahorse: Update to 3.36.2. 2020-10-06 02:54:03 +02:00
gnu-doc.scm
gnu-pw-mgr.scm gnu: gnu-pw-mgr: Update to 2.7. 2020-09-20 22:34:53 +03:00
gnucash.scm gnu: Fix package references. 2020-09-30 09:28:26 +03:00
gnunet.scm
gnupg.scm
gnustep.scm
gnuzilla.scm gnu: icecat: Update to 78.3.1-guix0-preview1. 2020-10-03 22:39:02 -04:00
gobby.scm
golang.scm gnu: Fix up package copyright headers. 2020-10-06 02:54:02 +02:00
gperf.scm
gpodder.scm
gps.scm gnu: gama: Update to 2.10. 2020-09-27 08:50:26 +03:00
graph.scm gnu: r-rgraphviz: Move to (gnu packages bioconductor). 2020-09-14 21:39:16 +02:00
graphics.scm gnu: Add goxel. 2020-09-15 14:40:20 +02:00
graphviz.scm
groff.scm gnu: roffit: Adjust install phase. 2020-09-15 09:41:37 +03:00
groovy.scm
gsasl.scm
gstreamer.scm gnu: orc: Update to 0.4.32. 2020-10-02 23:08:10 +02:00
gtk.scm gnu: libsigc++: Remove duplicate definition. 2020-10-05 14:10:00 +03:00
guile-wm.scm
guile-xyz.scm gnu: guile-prometheus: Update to 0-1.8980f39. 2020-10-05 17:35:37 +01:00
guile.scm gnu: guile-lzlib: Update to 0.0.2. 2020-09-28 11:39:31 +02:00
gv.scm
gxmessage.scm
hardware.scm
haskell-apps.scm
haskell-check.scm gnu: Fix typoes in package descriptions. 2020-09-23 04:37:01 +02:00
haskell-crypto.scm
haskell-web.scm gnu: Fix typoes in package descriptions. 2020-09-23 04:37:01 +02:00
haskell-xyz.scm gnu: Fix typoes in package descriptions. 2020-09-23 04:37:01 +02:00
haskell.scm
heads.scm
hexedit.scm
hugs.scm
hurd.scm
hyperledger.scm gnu: Fix typoes in package descriptions. 2020-09-23 04:37:01 +02:00
i2p.scm
ibus.scm gnu: librime: Update to 1.6.1. 2020-09-25 14:26:41 +02:00
icu4c.scm
idris.scm
idutils.scm gnu: Fix up package copyright headers. 2020-10-06 02:54:02 +02:00
image-processing.scm gnu: Add scantailor-advanced. 2020-10-01 14:22:15 +02:00
image-viewers.scm
image.scm gnu: grim: Fix output rotation interpretation with Sway 1.4. 2020-10-02 00:30:14 +02:00
imagemagick.scm
inklingreader.scm
inkscape.scm gnu: inkscape-1.0: Update to 1.0.1. 2020-09-21 19:39:25 +03:00
installers.scm
ipfs.scm
irc.scm
iso-codes.scm
jami.scm
java-compression.scm
java-graphics.scm
java-maths.scm
java.scm gnu: Fix typoes in package descriptions. 2020-09-23 04:37:01 +02:00
javascript.scm
jemalloc.scm
jose.scm
jrnl.scm
julia-xyz.scm
julia.scm
jupyter.scm
kawa.scm
kde-frameworks.scm gnu: Fix typoes in package descriptions. 2020-09-23 04:37:01 +02:00
kde-internet.scm gnu: konversation: Update to 1.7.6. 2020-10-05 00:16:57 +02:00
kde-multimedia.scm
kde-pim.scm
kde-plasma.scm
kde-systemtools.scm
kde-utils.scm gnu: Fix package references. 2020-09-30 09:28:26 +03:00
kde.scm gnu: kdenlive: Simplify 'wrap-executable phase. 2020-09-18 11:53:38 +02:00
kerberos.scm
key-mon.scm
kodi.scm
language.scm gnu: liblouisutdml: Update to 2.9.0. 2020-10-02 23:08:10 +02:00
ld-wrapper.in
lean.scm
lego.scm
less.scm
lesstif.scm
libbsd.scm
libcanberra.scm
libdaemon.scm
libedit.scm
libevent.scm
libffcall.scm
libffi.scm
libftdi.scm
libidn.scm
libphidget.scm
libreoffice.scm gnu: libstaroffice: Update to 0.0.7. 2020-10-03 16:51:07 +02:00
libsigsegv.scm
libunistring.scm
libunwind.scm
libusb.scm
license.scm
lighting.scm
linphone.scm gnu: Fix package references. 2020-09-30 09:28:26 +03:00
linux.scm gnu: libbpf: Fix erroneous use of DESTDIR. 2020-10-06 11:02:47 +02:00
lirc.scm
lisp-xyz.scm gnu: sbcl-cl-base64: Declare a source file-name. 2020-10-06 13:46:35 +03:00
lisp.scm
llvm.scm
logging.scm
logo.scm
loko.scm
lolcode.scm
lout.scm
lsof.scm
lua.scm
lxde.scm
lxqt.scm
m4.scm
machine-learning.scm gnu: python-keras: Fix build. 2020-10-05 01:49:45 -04:00
magic-wormhole.scm
mail.scm gnu: swaks: Support IPv6. 2020-10-05 21:49:59 +02:00
make-bootstrap.scm
man.scm
markup.scm
marst.scm
mastodon.scm
mate.scm
maths.scm gnu: SuiteSparse: Update to 5.8.1. 2020-10-01 12:45:38 +02:00
matrix.scm
maven-parent-pom.scm
maven.scm gnu: maven-compiler-plugin: Don't use unstable tarball. 2020-09-14 23:13:22 +03:00
mc.scm
mcrypt.scm
medical.scm
mercury.scm gnu: Fix package references. 2020-09-30 09:28:26 +03:00
mes.scm gnu: nyacc: Use versioned Guile site directory. 2020-10-03 00:04:43 +02:00
messaging.scm gnu: chatty: Update to 0.1.16. 2020-10-06 10:07:26 +02:00
microcom.scm
mingw.scm
moe.scm
monitoring.scm gnu: python2-graphite-web: Update to 1.1.7. 2020-09-22 18:41:59 +02:00
mono.scm
moreutils.scm
motti.scm
mp3.scm
mpd.scm gnu: mpdscribble: Update to 0.23. 2020-09-23 04:36:46 +02:00
mpi.scm gnu: openmpi: Have 'mpirun' look for executables under $prefix. 2020-09-24 17:53:01 +02:00
mtools.scm
multiprecision.scm
music.scm gnu: zrythm: Update to 1.0.0-alpha.3.0.1. 2020-10-06 11:39:57 +02:00
musl.scm
nano.scm
ncdu.scm
ncurses.scm
netpbm.scm
nettle.scm
networking.scm gnu: zeromq: Update to 4.3.3. 2020-10-02 23:08:10 +02:00
nfs.scm gnu: nfs-utils: Do not generate static libraries. 2020-09-24 14:01:29 -04:00
nickle.scm
nicotine.scm
nim.scm
ninja.scm
node-xyz.scm
node.scm
noweb.scm
nss.scm gnu: nss@3.56: Update to 3.57. 2020-10-02 08:11:39 +02:00
ntp.scm
nutrition.scm
nvi.scm
ocaml.scm gnu: ocaml4.07-sqlite3: Fix build. 2020-09-30 14:38:51 +02:00
ocr.scm
onc-rpc.scm
openbox.scm
opencl.scm
opencog.scm
openkinect.scm
openldap.scm gnu: python-ldap: Update to 3.3.1. 2020-09-22 18:41:58 +02:00
openpgp.scm
openstack.scm
orpheus.scm
ots.scm
package-management.scm gnu: guix: Update to 1.1.0-29.4e3ed9bad9. 2020-10-05 20:25:26 +02:00
pantheon.scm
parallel.scm
pascal.scm
password-utils.scm
patchutils.scm gnu: patchwork: Update to 2.2.2. 2020-09-22 18:42:00 +02:00
pciutils.scm
pcre.scm
pdf.scm
pem.scm
pep.scm
perl-check.scm gnu: perl-test-utf8: Update to 1.02. 2020-10-02 23:08:08 +02:00
perl-compression.scm
perl-web.scm
perl.scm gnu: perl-async-interrupt: Update to 1.26. 2020-10-02 23:08:08 +02:00
perl6.scm
phabricator.scm
photo.scm
php.scm gnu: php: Update to 7.4.11. 2020-10-01 00:13:41 +02:00
piet.scm
pkg-config.scm
plotutils.scm
poedit.scm
polkit.scm
popt.scm
presentation.scm
pretty-print.scm gnu: waybar: Fix build. 2020-09-15 12:02:28 +03:00
printers.scm
profiling.scm
prolog.scm gnu: Fix package references. 2020-09-30 09:28:26 +03:00
protobuf.scm gnu: protobuf: Update to 1.3.3. 2020-10-03 16:51:06 +02:00
pth.scm
pulseaudio.scm gnu: libsndfile: Replace with 1.0.30 [security fixes]. 2020-09-28 00:46:21 +02:00
pumpio.scm
pure.scm
purescript.scm
pv.scm
python-check.scm gnu: Add python-pyux. 2020-10-02 21:47:28 -04:00
python-compression.scm
python-crypto.scm gnu: Fix typoes in package descriptions. 2020-09-23 04:37:01 +02:00
python-science.scm
python-web.scm gnu: Fix package references. 2020-09-30 09:28:26 +03:00
python-xyz.scm gnu: python-tox: Update to 3.20.0. 2020-10-06 11:45:29 +02:00
python.scm gnu: micropython: Update to 1.13. 2020-09-29 12:16:20 +02:00
qt.scm
radio.scm gnu: multimon-ng: Update to 1.1.9. 2020-09-23 12:59:15 +02:00
ragel.scm
rails.scm
ratpoison.scm
rcm.scm
rdesktop.scm gnu: freerdp: Update to 2.2.0. 2020-10-04 14:35:23 +02:00
rdf.scm gnu: sord: Update to 0.16.6. 2020-10-02 00:30:43 +02:00
re2c.scm
readline.scm
rednotebook.scm
regex.scm
robotics.scm
rpc.scm
rrdtool.scm
rsync.scm
ruby.scm gnu: Fix package references. 2020-09-30 09:28:26 +03:00
rush.scm
rust-apps.scm gnu: Move graphics crates to crates-graphics.scm. 2020-10-05 13:39:07 +03:00
rust.scm gnu: rust: Fix install phase for non-x86_64 platforms. 2020-09-25 20:24:46 +01:00
sagemath.scm gnu: Fix package references. 2020-09-30 09:28:26 +03:00
samba.scm gnu: samba: Fix fcntl hint detection in configure script. 2020-09-22 19:52:07 +01:00
sawfish.scm
scanner.scm
scheme.scm
screen.scm
scribus.scm
scsi.scm
sdcc.scm
sdl.scm
search.scm
security-token.scm
selinux.scm
sequoia.scm
serialization.scm
serveez.scm
shells.scm gnu: oil: Update to 0.8.1. 2020-10-02 00:29:21 +02:00
shellutils.scm
simh.scm
simulation.scm
skarnet.scm gnu: s6-portable-utils: Update to 2.2.3.0. 2020-10-06 02:54:03 +02:00
skribilo.scm
slang.scm
smalltalk.scm
sml.scm
speech.scm
sphinx.scm
spice.scm gnu: spice-protocol: Update to 0.14.3. 2020-10-06 02:54:02 +02:00
sqlite.scm
squirrel.scm
ssh.scm gnu: lsh: Enable some tests. 2020-10-05 23:52:24 -04:00
sssd.scm
stalonetray.scm
statistics.scm gnu: r-tclust: Update to 1.4-2. 2020-10-06 00:35:02 +02:00
stb.scm
stenography.scm
storage.scm
suckless.scm gnu: dmenu: Update to 5.0. 2020-09-23 12:39:57 +02:00
swig.scm
sync.scm
syncthing.scm
syndication.scm gnu: newsboat: Fix inputs. 2020-09-30 09:39:32 +03:00
synergy.scm
task-management.scm gnu: Add blanket. 2020-09-22 10:57:08 +02:00
tbb.scm gnu: tbb: Update to 2020.3. 2020-10-01 12:45:38 +02:00
tcl.scm
telephony.scm
terminals.scm gnu: Move graphics crates to crates-graphics.scm. 2020-10-05 13:39:07 +03:00
terraform.scm
tex.scm gnu: Add texlive-symbol. 2020-10-01 11:04:00 +01:00
texinfo.scm
text-editors.scm gnu: scintilla: Update to 4.4.5. 2020-09-29 10:36:08 +02:00
textutils.scm gnu: java-rsyntaxtextarea: Don't use unstable tarball. 2020-09-24 20:06:41 +03:00
time.scm
tls.scm gnu: gnutls: Fix cross-compilation. 2020-10-05 11:10:35 +02:00
tmux.scm
tor.scm gnu: tor: Update to 0.4.4.5. 2020-09-15 23:36:44 +02:00
toys.scm
tryton.scm
tv.scm gnu: Fix up package copyright headers. 2020-10-06 02:54:02 +02:00
uml.scm gnu: plantuml: Update to 1.2020.17. 2020-09-24 09:16:50 +02:00
unicode.scm
unrtf.scm
upnp.scm
usb-modeswitch.scm
uucp.scm
valgrind.scm
version-control.scm gnu: Add grokmirror. 2020-09-27 22:50:17 +02:00
video.scm gnu: obs: Update to 26.0.1. 2020-10-06 02:54:02 +02:00
vim.scm gnu: vim: Update to 8.2.1801. 2020-10-06 01:04:46 +02:00
virtualization.scm gnu: skopeo: Update to 1.2.0. 2020-10-01 14:42:12 +02:00
visidata.scm
vlang.scm gnu: vlang: Correctly refer to output directories. 2020-10-06 09:45:13 +03:00
vnc.scm
vpn.scm gnu: protonvpn-cli: Add python-jinja2 input. 2020-10-03 16:51:08 +02:00
vulkan.scm
w3m.scm
wdiff.scm
web-browsers.scm gnu: nyxt: Update to 2-pre-release-2. 2020-09-24 11:14:23 +02:00
web.scm gnu: perl-cgi: Update to 4.51. 2020-10-06 02:54:03 +02:00
webkit.scm gnu: webkitgtk: Update to 2.30.1. 2020-10-03 22:38:55 -04:00
wget.scm
wicd.scm
wine.scm
wireservice.scm
wm.scm gnu: grim: Fix output rotation interpretation with Sway 1.4. 2020-10-02 00:30:14 +02:00
wordnet.scm
wv.scm gnu: Fix typoes in package descriptions. 2020-09-23 04:37:01 +02:00
wxwidgets.scm
xdisorg.scm gnu: Fix package references. 2020-09-30 09:28:26 +03:00
xfce.scm
xfig.scm
xiph.scm gnu: libshout: Update to 2.4.4. 2020-10-06 01:04:47 +02:00
xml.scm
xnee.scm
xorg.scm gnu: xpra: Update to 4.0.4. 2020-10-01 21:55:03 +02:00
zile.scm
zwave.scm