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guix/gnu/packages
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Ricardo Wurmus cc6ed47737 gnu: Add plink. 
* gnu/packages/bioinformatics.scm (plink): New variable.
* gnu/packages/patches/plink-1.07-unclobber-i.patch: New file.
2015-06-29 12:54:48 +02:00
..
bootstrap gnu: Update bootstrap binaries for x86_64 and i686. 2015-03-31 23:07:17 +02:00
patches gnu: Add plink. 2015-06-29 12:54:48 +02:00
aarddict.scm
abiword.scm
acct.scm
acl.scm
admin.scm gnu: inetutils: Update to 1.9.4. 2015-06-11 10:08:01 -04:00
adns.scm
aidc.scm
algebra.scm gnu: arb: Update to 2.3.0. 2015-03-20 20:39:03 +01:00
apl.scm gnu: apl: Update to 1.5. 2015-04-06 22:24:15 -04:00
apr.scm gnu: apr-util: Use system expat library. 2015-05-07 05:06:26 -04:00
asciidoc.scm
aspell.scm
attr.scm
audacity.scm gnu: Add audacity. 2015-03-30 11:47:33 +02:00
audio.scm gnu: Add Guitarix. 2015-06-28 18:59:57 +02:00
autogen.scm gnu: autogen: Update to 5.18.5. 2015-05-12 22:50:46 -04:00
autotools.scm packages: Make 'location' field innate. 2015-06-11 23:33:32 +02:00
avahi.scm
avr.scm gnu: Update packages to use 'non-copyleft' instead of 'bsd-style'. 2015-03-14 19:27:14 +01:00
backup.scm
base.scm gnu: tar: Skip tests that rely on undefined unlinkat(2) behavior. 2015-06-16 00:27:27 +02:00
bash.scm gnu: bash-completion: Remove completions redundant with those of util-linux. 2015-04-19 23:34:53 +02:00
bdw-gc.scm
bioinformatics.scm gnu: Add plink. 2015-06-29 12:54:48 +02:00
bison.scm gnu: bison: Add m4 as a native input. 2015-05-21 15:29:53 +03:00
bittorrent.scm
boost.scm gnu: Add mdds. 2015-04-26 14:38:23 +02:00
bootstrap.scm
busybox.scm gnu: busybox: Parameterize reference to /gnu/store. 2015-05-15 16:38:53 +02:00
calcurse.scm
calendar.scm gnu: Add libical. 2015-05-04 22:15:50 -04:00
ccache.scm
cdrom.scm gnu: xorriso: Update to 1.4.0. 2015-05-19 15:29:01 -04:00
certs.scm gnu: Remove unneeded uses of #:imported-modules. 2015-04-01 15:39:47 +02:00
check.scm gnu: catch-framework: Update to 1.1.3. 2015-06-12 23:01:33 +02:00
ci.scm gnu: Add hydra. 2015-06-13 08:05:01 -05:00
cmake.scm gnu: cmake: Disable parallel tests. 2015-04-28 17:16:18 +08:00
code.scm gnu: Add withershins. 2015-06-12 23:01:33 +02:00
commencement.scm gnu: Refer to 'gcc' instead of 'gcc-4.9'. 2015-06-26 17:06:30 +02:00
compression.scm gnu: Add sfarkxtc. 2015-06-28 19:39:48 +02:00
conkeror.scm
cook.scm
cpio.scm gnu: cpio: Fix symlink-bad-length test. 2015-06-17 23:19:02 -04:00
cppi.scm
cross-base.scm gnu: Refer to 'gcc' instead of 'gcc-4.9'. 2015-06-26 17:06:30 +02:00
crypto.scm
cryptsetup.scm
cups.scm gnu: cups: Update to 2.0.3. 2015-06-10 14:50:28 -04:00
curl.scm gnu: curl: Update to 7.42.1. 2015-05-04 12:37:30 -04:00
cursynth.scm
cyrus-sasl.scm gnu: Update packages to use 'non-copyleft' instead of 'bsd-style'. 2015-03-14 19:27:14 +01:00
databases.scm gnu: sqlite: Update to 3.8.10.2. 2015-06-15 20:37:46 -04:00
datamash.scm
dc.scm
debug.scm gnu: c-reduce: Use llvm and clang 3.5. 2015-03-14 15:48:23 -05:00
dejagnu.scm gnu: dejagnu: Update to 1.5.3. 2015-05-03 16:01:42 +02:00
dictionaries.scm Revert "gnu: Add sdcv." 2015-03-22 22:08:50 +01:00
disk.scm gnu: Add dosfstools. 2015-05-07 00:54:17 -04:00
djvu.scm
dns.scm gnu: bind-utils: Add new variable. 2015-03-14 22:01:48 +01:00
docbook.scm
doxygen.scm
ebook.scm gnu: calibre: Update to 2.30.0. 2015-06-16 12:33:08 +02:00
ed.scm gnu: ed: Update to 1.11. 2015-04-04 03:46:55 -04:00
elf.scm gnu: elfutils: Add $libdir to the RUNPATH of binaries. 2015-04-11 17:08:27 +02:00
emacs.scm gnu: Add haskell-mode. 2015-06-15 15:18:11 +02:00
enchant.scm
engineering.scm gnu: Remove all #:select from (gnu packages ...) modules. 2015-04-20 15:50:59 +02:00
enlightenment.scm gnu: evas-generic-loaders: Update to 1.13.2. 2015-04-26 17:44:47 +02:00
fcitx.scm gnu: Add fcitx. 2015-04-02 17:54:57 +08:00
feh.scm gnu: feh: Update to 2.13. 2015-05-20 16:23:43 +08:00
file.scm
firmware.scm gnu: Update packages to use 'non-copyleft' instead of 'bsd-style'. 2015-03-14 19:27:14 +01:00
fish.scm gnu: fish: Update to 2.1.2. 2015-03-07 16:03:55 -05:00
flashing-tools.scm
flex.scm gnu: flex: Fix native-inputs field. 2015-05-31 21:18:54 -04:00
fltk.scm gnu: fltk: Use system zlib, libjpeg, and libpng. 2015-05-19 10:09:09 -05:00
fonts.scm gnu: Add WenQuanYi ZenHei font. 2015-03-11 13:03:28 +01:00
fontutils.scm gnu: Update packages to use 'non-copyleft' instead of 'bsd-style'. 2015-03-14 19:27:14 +01:00
freedesktop.scm gnu: Add wayland. 2015-06-17 18:29:15 +08:00
freeipmi.scm
fribidi.scm
ftp.scm gnu: lftp: Add alternate URL for old tarballs. 2015-05-13 22:51:56 +02:00
fvwm.scm
game-development.scm gnu: Add sfxr. 2015-05-20 12:13:04 -04:00
games.scm gnu: Add fizmo. 2015-05-21 20:14:02 +08:00
gawk.scm gnu: gawk: Update to 4.1.3. 2015-06-04 08:58:23 +02:00
gcal.scm
gcc.scm gnu: Add default GCC and default gfortran. 2015-06-25 18:28:54 +02:00
gd.scm gnu: Add GD-SecurityImage. 2015-04-04 00:46:03 -05:00
gdb.scm gnu: gdb: Update to 7.9.1. 2015-05-15 21:42:24 -04:00
gdbm.scm
geeqie.scm
gettext.scm gnu: gettext: Fix non-deterministic msgunfmt behavior. 2015-06-15 23:34:01 +02:00
ghostscript.scm gnu: ghostscript: Add $libdir to the RUNPATH of executables. 2015-04-05 15:23:11 +02:00
gimp.scm gnu: gimp: Enable Python scripting support. 2015-05-08 21:55:42 +02:00
gkrellm.scm
gl.scm gnu: ftgl: Propagate "freetype". 2015-06-23 21:41:42 +02:00
glib.scm gnu: itstool: Add python2-libxml2 to propagated-inputs. 2015-06-19 23:02:36 -04:00
gnome.scm gnu: Add gnome-klotski. 2015-06-23 14:16:42 +08:00
gnu-pw-mgr.scm gnu: gnu-pw-mgr: Update to 1.4. 2015-06-02 15:43:34 -04:00
gnucash.scm gnu: webkitgtk-2.4: Update to 2.8.9, build with gtk3. 2015-05-29 16:05:49 +08:00
gnunet.scm gnu: libmicrohttpd: Update to 0.9.40. 2015-04-14 10:03:24 +02:00
gnupg.scm gnu: pius: Depend on GnuPG 2.0 rather than 2.1. 2015-06-24 18:05:03 +02:00
gnustep.scm
gnutls.scm gnu: gnutls: Update to 3.4.1. 2015-05-23 00:17:48 -04:00
gnuzilla.scm gnu: icecat: Update to 31.7.0-gnu1. 2015-06-06 08:02:45 -04:00
gperf.scm
gprolog.scm
gps.scm
graphics.scm utils: 'modify-phases' no longer introduces quotes. 2015-03-31 22:43:01 +02:00
graphviz.scm
groff.scm
grub.scm
grue-hunter.scm
gsasl.scm
gstreamer.scm gnu: gstreamer: Add search path specification for 'GST_PLUGIN_SYSTEM_PATH'. 2015-06-25 10:09:08 +08:00
gtk.scm gnu: gtk+: Add SVG support to 'gtk-encode-symbolic-svg'. 2015-05-23 11:21:49 +08:00
guile-wm.scm
guile.scm gnu: guile-reader: Update to 0.6.1. 2015-06-03 11:47:36 +02:00
gv.scm
gxmessage.scm
haskell.scm gnu: ghc: Patch runtime references to /bin/sh. 2015-06-11 18:55:49 -05:00
hugs.scm gnu: Update packages to use 'non-copyleft' instead of 'bsd-style'. 2015-03-14 19:27:14 +01:00
hurd.scm gnu: mig: Update to 1.5 2015-04-16 14:13:23 +03:00
ibus.scm gnu: gconf: Propagate input glib. 2015-05-20 23:46:17 +02:00
icu4c.scm gnu: icu4c: Update to 55.1. 2015-05-12 09:27:26 -04:00
idutils.scm gnu: Use emacs-no-x when we just want to byte-compile code. 2015-03-19 23:15:50 +01:00
image.scm Merge branch 'master' into core-updates 2015-06-18 01:32:37 -04:00
imagemagick.scm gnu: imagemagick: Do not retain reference to "doc" output. 2015-06-22 23:17:16 +02:00
indent.scm
inkscape.scm
irssi.scm
iso-codes.scm
java.scm gnu: icedtea7: Bootstrap with GCJ. 2015-06-12 12:57:30 +02:00
jemalloc.scm gnu: jemalloc: Build with gcc-4.8 on i686. 2015-06-21 14:14:04 -04:00
jrnl.scm
julia.scm gnu: Replace versioned gfortran inputs with just "gfortran". 2015-06-25 18:28:54 +02:00
kde.scm gnu: Tweak a few synopses and descriptions reported by 'lint'. 2015-05-13 22:51:56 +02:00
key-mon.scm utils: 'modify-phases' no longer introduces quotes. 2015-03-31 22:43:01 +02:00
language.scm gnu: Add String-ToIdentifier-EN. 2015-03-17 13:03:51 -05:00
ld-wrapper.in ld-wrapper: Ignore .so files specified after "-plugin" for RUNPATH purposes. 2015-06-14 01:00:27 +02:00
less.scm
lesstif.scm
libcanberra.scm
libdaemon.scm
libedit.scm gnu: Tweak a few synopses and descriptions reported by 'lint'. 2015-05-13 22:51:56 +02:00
libevent.scm
libffcall.scm
libffi.scm
libftdi.scm
libidn.scm gnu: libidn: Update to 1.30. 2015-04-21 18:57:28 -04:00
libphidget.scm
libreoffice.scm gnu: Add LibreOffice. 2015-06-04 22:59:18 +02:00
libsigsegv.scm
libunistring.scm
libunwind.scm
libupnp.scm
libusb.scm gnu: libusb: Update to 1.0.19. 2015-05-17 11:45:27 +02:00
lightning.scm
links.scm
linux-libre-i686.conf gnu: linux-libre: Update to 4.1. 2015-06-23 02:53:00 -04:00
linux-libre-x86_64.conf gnu: linux-libre: Update to 4.1. 2015-06-23 02:53:00 -04:00
linux.scm gnu: linux-libre: Update to 4.1. 2015-06-23 02:53:00 -04:00
lirc.scm gnu: Add LIRC. 2015-03-26 15:47:39 +03:00
lisp.scm gnu: ccl: Add default 'match' cases for unsupported platforms. 2015-04-22 15:08:45 -04:00
llvm.scm gnu: Refer to 'gcc' instead of 'gcc-4.9'. 2015-06-26 17:06:30 +02:00
lout.scm
lsh.scm gnu: nettle: Make version 3 the default. 2015-04-09 18:49:28 +02:00
lsof.scm gnu: lsof: Add mirrors. 2015-04-06 20:50:35 +02:00
lua.scm
lxqt.scm gnu: Add libqtxdg. 2015-03-06 22:49:35 +01:00
lynx.scm
m4.scm gnu: m4: Disable tests when cross-compiling. 2015-05-15 15:06:37 +02:00
machine-learning.scm gnu: Replace versioned gfortran inputs with just "gfortran". 2015-06-25 18:28:54 +02:00
mail.scm gnu: dbus-glib: Propagate inputs dbus and glib. 2015-05-23 17:12:00 +02:00
make-bootstrap.scm gnu: Refer to 'gcc' instead of 'gcc-4.9'. 2015-06-26 17:06:30 +02:00
man.scm gnu: help2man: Update to 1.46.6. 2015-05-03 16:01:42 +02:00
maths.scm gnu: Replace versioned gfortran inputs with just "gfortran". 2015-06-25 18:28:54 +02:00
mc.scm
mcrypt.scm
messaging.scm gnu: dbus-glib: Propagate inputs dbus and glib. 2015-05-23 17:12:00 +02:00
mg.scm
miscfiles.scm
mit-krb5.scm gnu: Update packages to use 'non-copyleft' instead of 'bsd-style'. 2015-03-14 19:27:14 +01:00
moe.scm gnu: moe: Update to 1.7. 2015-05-06 11:13:47 -05:00
moreutils.scm
mp3.scm gnu: lame: Build with gcc-4.8 on i686. 2015-06-21 14:08:39 -04:00
mpd.scm gnu: ncmpcpp: Move taglib from native-inputs. 2015-03-09 21:59:11 +01:00
mpi.scm gnu: Replace versioned gfortran inputs with just "gfortran". 2015-06-25 18:28:54 +02:00
mtools.scm
multiprecision.scm
music.scm gnu: Add setBfree. 2015-06-23 21:41:42 +02:00
nano.scm gnu: nano: Update to 2.4.1. 2015-04-18 20:16:57 +02:00
ncdu.scm
ncurses.scm gnu: ncurses: Install terminfo files when cross-compiling. 2015-04-02 22:25:55 +02:00
netpbm.scm gnu: netpbm: Remove non-FSDG-compliant code in 'snippet'. 2015-04-11 13:06:22 +02:00
nettle.scm gnu: nettle: Disable ifunc method of library initialization. 2015-06-25 16:47:59 -04:00
networking.scm gnu: Add miredo. 2015-05-13 01:09:18 +02:00
ninja.scm
node.scm Merge branch 'master' into core-updates 2015-04-08 16:04:37 +08:00
noweb.scm
ntp.scm gnu: ntp: Update to 4.2.8p2. 2015-04-18 02:28:30 -04:00
nutrition.scm
nvi.scm
ocaml.scm gnu: ocaml: Update gcc:lib input to gcc-4.9. 2015-06-18 01:33:57 -04:00
ocr.scm gnu: ocrad: Update to 0.25. 2015-04-21 22:57:29 +02:00
onc-rpc.scm
openbox.scm
openldap.scm gnu: openldap: Update list of source URLs. 2015-05-29 22:54:04 +02:00
openssl.scm gnu: openssl: Update to 1.0.2c. 2015-06-14 08:49:50 -04:00
orpheus.scm
ots.scm
package-management.scm gnu: guix: Update snapshot. 2015-06-18 00:10:02 -04:00
parallel.scm gnu: parallel: Update to 20150422. 2015-05-03 16:01:42 +02:00
patchutils.scm gnu: Add colordiff. 2015-03-19 14:50:07 +01:00
pciutils.scm
pcre.scm gnu: pcre: Update to 8.37. 2015-05-13 19:09:58 -04:00
pdf.scm gnu: zathura: Update to 0.3.3. 2015-05-21 01:07:57 +02:00
pem.scm
perl.scm Merge branch 'master' into core-updates 2015-06-14 08:49:42 -04:00
photo.scm gnu: Remove all #:select from (gnu packages ...) modules. 2015-04-20 15:50:59 +02:00
pkg-config.scm
plotutils.scm utils: 'modify-phases' no longer introduces quotes. 2015-03-31 22:43:01 +02:00
polkit.scm gnu: polkit-qt: Add $libdir to RUNPATH. 2015-05-01 17:38:44 +02:00
popt.scm gnu: Add argtable. 2015-04-01 11:39:33 +02:00
pretty-print.scm gnu: source-highlight: Remove obsolete patch. 2015-04-04 11:02:34 -04:00
protobuf.scm
pth.scm
pulseaudio.scm gnu: Remove all #:select from (gnu packages ...) modules. 2015-04-20 15:50:59 +02:00
pumpio.scm
pv.scm gnu: Add pv. 2015-06-27 17:27:49 +03:00
python.scm gnu: Add python2-fastlmm. 2015-06-26 15:29:01 +02:00
qemu.scm gnu: qemu: Add fixes for CVE-2015-{4037,4103,4104,4105,4106}. 2015-06-16 00:29:28 -04:00
qt.scm gnu: qt: Add more inputs. 2015-06-16 23:30:06 +08:00
ratpoison.scm gnu: ratpoison: Install xsession file (ratpoison.desktop). 2015-03-10 12:51:35 +08:00
rdesktop.scm
rdf.scm gnu: redland: Propagate input. 2015-05-17 10:08:29 +02:00
readline.scm
rrdtool.scm
rsync.scm
ruby.scm gnu: Add ruby 2.1.6 2015-06-19 08:27:27 -04:00
rush.scm
samba.scm gnu: talloc: Change source URI to use https. 2015-06-16 14:20:56 -04:00
sawfish.scm gnu: librep: Update to 0.92.5. 2015-04-03 23:36:05 +08:00
scanner.scm
scheme.scm gnu: chibi-scheme: Update to 0.7.3. 2015-05-27 21:13:15 +02:00
screen.scm gnu: screen: Install the Info manual. 2015-06-24 09:20:27 +08:00
sdl.scm gnu: Don't use #:prefix in (gnu packages sdl). 2015-04-14 23:25:37 +02:00
search.scm gnu: bool: Synchronize synopsis and description with upstream. 2015-05-13 23:49:33 +02:00
serveez.scm
shishi.scm
skribilo.scm gnu: skribilo: Add dependency on Ploticus. 2015-03-12 22:52:18 +01:00
slang.scm gnu: slang: Combine duplicate 'arguments' fields. 2015-03-08 01:36:35 -05:00
slim.scm
smalltalk.scm
ssh.scm gnu: openssh: Update to 6.8p1. 2015-03-25 23:10:46 -04:00
stalonetray.scm
statistics.scm gnu: Replace versioned gfortran inputs with just "gfortran". 2015-06-25 18:28:54 +02:00
suckless.scm gnu: Rename (gnu packages dwm) to (gnu packages suckless). 2015-06-15 17:25:41 -04:00
swig.scm gnu: swig: Update to 3.0.5. 2015-06-18 09:46:55 -04:00
sxiv.scm
synergy.scm gnu: synergy: Upgrade to 1.7.3. 2015-06-28 12:03:30 -05:00
task-management.scm gnu: Add taskwarrior. 2015-05-04 10:30:10 +02:00
tbb.scm gnu: tbb: Set rpath in LDFLAGS. 2015-04-27 15:12:46 +02:00
tcl.scm gnu: Update packages to use 'non-copyleft' instead of 'bsd-style'. 2015-03-14 19:27:14 +01:00
tcsh.scm gnu: tcsh: Add alternate URL for old tarballs. 2015-05-31 22:39:48 +02:00
telephony.scm gnu: sipwitch: Update to 1.9.8. 2015-06-23 00:19:25 +02:00
texinfo.scm
texlive.scm gnu: Remove unneeded uses of #:imported-modules. 2015-04-01 15:39:47 +02:00
textutils.scm gnu: Add markdown. 2015-05-04 23:30:51 +02:00
time.scm
tmux.scm
tor.scm gnu: tor: Update to 0.2.6.8. 2015-06-06 00:51:10 -04:00
tre.scm
tv.scm gnu: Add tvtime. 2015-05-10 18:30:54 +03:00
unrtf.scm gnu: unrtf: Update to 0.21.9. 2015-06-19 11:08:20 +02:00
upnp.scm gnu: miniupnpc: Allow executables to find libupnp.so. 2015-04-14 10:03:24 +02:00
uucp.scm
valgrind.scm gnu: valgrind: Fix build against glibc 2.21 2015-03-06 22:19:12 +01:00
version-control.scm gnu: git: Update to 2.4.3. 2015-06-16 00:21:48 -04:00
video.scm gnu: youtube-dl: Update to 2015.06.25. 2015-06-26 16:56:43 +02:00
vim.scm
vpn.scm gnu: Add openvpn. 2015-05-07 10:54:12 -04:00
vtk.scm
w3m.scm
wdiff.scm
web.scm gnu: Add Catalyst-Authentication-Store-DBIx-Class. 2015-06-13 08:05:00 -05:00
webkit.scm gnu: webkitgtk: Update to 2.8.3. 2015-05-29 18:06:08 +08:00
weechat.scm
wget.scm gnu: wget: Update to 1.16.3. 2015-03-09 23:51:43 +01:00
wicd.scm gnu: dbus-glib: Propagate inputs dbus and glib. 2015-05-23 17:12:00 +02:00
wine.scm gnu: wine: Add $libdir to the RUNPATH of binaries. 2015-04-15 19:07:55 +08:00
wordnet.scm
wv.scm
wxwidgets.scm gnu: wxwidgets-2: Add $libdir to RUNPATH. 2015-05-05 22:00:53 +02:00
xdisorg.scm gnu: Add xf86-input-wacom. 2015-04-18 22:57:52 +02:00
xfce.scm gnu: Add xfce4-clipman-plugin. 2015-05-19 22:28:15 +08:00
xfig.scm
xiph.scm gnu: Add libshout. 2015-04-05 10:37:59 +08:00
xml.scm Merge branch 'master' into core-updates 2015-06-14 08:49:42 -04:00
xnee.scm
xorg.scm Merge branch 'wip-glib' into master. 2015-04-26 16:05:39 +02:00
yasm.scm gnu: Update packages to use 'non-copyleft' instead of 'bsd-style'. 2015-03-14 19:27:14 +01:00
yubico.scm
zile.scm
zip.scm gnu: Update packages to use 'non-copyleft' instead of 'bsd-style'. 2015-03-14 19:27:14 +01:00
zsh.scm gnu: zsh: Use ISO-8859-1 in 'fix-sh' phase. 2015-03-07 02:40:55 -05:00