Commit graph

1268 commits

Author SHA1 Message Date
Danny Milosavljevic
ec40a0501f
gnu: Add lyx.
* gnu/packages/patches/lyx-2.2.3-fix-test.patch: New file.
* gnu/local.mk: Add it.
* gnu/packages/tex.scm (lyx): New variable.
2018-03-22 23:11:17 +01:00
Ludovic Courtès
ca5b73114f
gnu: shepherd: Update to 0.4.0.
* gnu/packages/admin.scm (shepherd): Update to 0.4.0.  Remove patches.
* gnu/packages/patches/shepherd-close-fds.patch,
gnu/packages/patches/shepherd-herd-status-sorted.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/services/admin.scm (%default-rotations): Remove
/var/log/shepherd.log.
2018-03-22 11:43:30 +01:00
Marius Bakke
dc7e07c9b9
Merge branch 'staging' 2018-03-20 14:13:05 +01:00
Tobias Geerinckx-Rice
eaa69a7996
gnu: libtirpc: Update to 1.0.3.
* gnu/packages/onc-rpc.scm (libtirpc): Update to 1.0.3.
[source]: Remove patch.
* gnu/packages/patches/libtirpc-missing-headers.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-03-19 13:25:27 +01:00
Marius Bakke
7ace97395f
Merge branch 'master' into staging 2018-03-18 01:09:25 +01:00
Christopher Baines
be5ed14213
gnu: Add terraform-docs.
* gnu/packages/terraform.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2018-03-17 23:04:29 +00:00
Gábor Boskovits
3c27414968
gnu: java-simple-xml: Fix java8 test failures.
* gnu/packages/patches/javas-simple-xml-fix-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/java.scm (java-simple-xml)[source](patches): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-03-18 00:02:05 +01:00
Leo Famulari
77166eb758
gnu: util-linux: Fix CVE-2018-7738.
* gnu/packages/patches/util-linux-CVE-2018-7738.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/linux.scm (util-linux)[replacement]: New field.
(util-linux/fixed): New variable.
2018-03-16 10:31:52 -04:00
Leo Famulari
20ecede969
gnu: shadow: Fix CVE-2018-7169.
* gnu/packages/patches/shadow-CVE-2018-7169.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/admin.scm (shadow)[source]: Use it.
2018-03-15 13:13:35 -04:00
Ricardo Wurmus
2b5c5f03c2
gnu: Add ada.scm to GNU_SYSTEM_MODULES.
This is a follow-up to commit ebd43a2a45.

* gnu/local.mk (GNU_SYSTEM_MODULES): Add ada.scm.
2018-03-14 13:21:26 +01:00
Efraim Flashner
8e1cd1a2c5
gnu: Add debian-archive-keyring.
* gnu/packages/debian.scm (debian-archive-keyring): New variable.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2018-03-12 21:54:44 +02:00
Marius Bakke
a248a9ac6a
Merge branch 'staging-next' into staging 2018-03-12 18:22:53 +01:00
Tobias Geerinckx-Rice
5400fdfd5d
gnu: lrzip: Fix CVE-2017-8842.
* gnu/packages/compression.scm (lrzip)[source]: Add patch.
* gnu/packages/patches/lrzip-CVE-2017-8842.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-03-12 18:15:21 +01:00
Gábor Boskovits
594bd3a08a
gnu: java-jeromq: Fix tests.
* gnu/packages/patches/java-jeromq-fix-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/java.scm (java-jeromq)[source](patches): Add it.
[arguments](#test-exclude): Disable more failing tests.
2018-03-11 20:06:06 +01:00
Leo Famulari
f55aa0c7b7
gnu: zsh: Fix CVE-2018-{7548,7549}.
* gnu/packages/patches/zsh-CVE-2018-7548.patch,
gnu/packages/patches/zsh-CVE-2018-7549.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/shells.scm (zsh)[source]: Use them.
2018-03-10 12:30:53 -05:00
Marius Bakke
d8fa1890c7
Merge branch 'master' into staging 2018-03-08 21:21:05 +01:00
Hartmut Goebel
7ac43c44e8
gnu: giflib: Make "reallocarray" private, solve glibc@2.26 conflict.
Rename the function and move the declaration from gif_lib.h to
gif_lib_private.h to solve conflicts when some .c-file #includes
both stdlib.h and gif_lib.h.
See also https://sourceforge.net/p/giflib/bugs/110/

* gnu/packages/patches/giflib-make-reallocarray-private.patch: New
  file
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/image.scm(giflib)[source](patches): New field.
2018-03-08 09:05:52 +01:00
Marius Bakke
5de561a796
gnu: gnome-todo: Fix compatibility with libical >= 3.0.
* gnu/packages/patches/gnome-todo-libical-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/gnome.scm (gnome-todo)[source](patches): Use it.
2018-03-07 15:06:22 +01:00
Julien Lepiller
41125eaff8
gnu: Add maven-resolver-api.
* gnu/packages/maven.scm: New file.
(maven-resolver-api): New variable.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2018-03-06 23:05:34 +01:00
Leo Famulari
613ef763a5
Merge branch 'master' into staging 2018-03-06 13:39:12 -05:00
Marius Bakke
5b0b520e22
gnu: ceph: Update to 12.2.4.
* gnu/packages/patches/ceph-disable-cpu-optimizations.patch: Adjust to
upstream changes.
* gnu/packages/patches/ceph-disable-unittest-throttle.patch: Delete file.
* gnu/packages/patches/ceph-rocksdb-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/storage.scm (ceph): Update to 12.2.4.
[source](patches): Adjust.
[arguments]: Add "-DWITH_BABELTRACE=OFF" in #:configure-flags.  Build with
CMAKE-3.11.  Adjust file substitutions.  Wrap 'ceph' executable.
[native-inputs]: Add GPERF.
[inputs]: Replace BOOST with BOOST-1.66.  Add PYTHON2-PRETTYTABLE.
2018-03-04 17:54:40 +01:00
Gábor Boskovits
48c8622010
gnu: antlr3-3.3: Fix java8 issue.
* gnu/packages/java.scm (antlr3-3.3)[source]: Add patch.
* gnu/packages/patches/antlr3-3_3-fix-java8-compilation.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2018-03-04 14:16:37 +01:00
Gábor Boskovits
4c763b4d67
gnu: antlr3-3.1: Fix java8 issue.
* gnu/packages/java.scm (antlr3-3.1)[source]: Add patch.
* gnu/packages/patches/antlr3-3_1-fix-java8-compilation.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2018-03-04 14:13:47 +01:00
Ricardo Wurmus
fa5965990d
gnu: Add r-hpar.
* gnu/packages/bioconductor.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2018-03-02 23:24:57 +01:00
Mark H Weaver
8863f2f051
gnu: icecat: Update to 52.6.0-gnu1.
* gnu/packages/gnuzilla.scm (icecat): Update to 52.6.0-gnu1.
[source]: Remove patches that are no longer needed.
* gnu/packages/patches/icecat-bug-1348660-pt5.patch,
gnu/packages/patches/icecat-bug-1414945.patch,
gnu/packages/patches/icecat-bug-1415133.patch,
gnu/packages/patches/icecat-bug-1424373-pt2.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2018-03-02 01:31:19 -05:00
Julien Lepiller
8147d7c675
gnu: php: Fix test failure.
* gnu/packages/php.scm (php)[inputs]: Use gd-for-php.
(gd-for-php): New private variable.
* gnu/packages/patches/gd-CVE-2018-5711.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-03-01 22:25:28 +01:00
Ricardo Wurmus
b672a81607
gnu: Graft glibc to allow execution on Linux 2.6.32.
* gnu/packages/patches/glibc-allow-kernel-2.6.32.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/base.scm (glibc/linux)[replacement]: New field.
(glibc-2.26-patched): New variable.
2018-03-01 21:32:36 +01:00
Marius Bakke
86990eeda2
Merge branch 'master' into staging 2018-03-01 18:04:12 +01:00
Tobias Geerinckx-Rice
9d43579f2d
gnu: dovecot: Update to 2.3.0.1 [fixes CVE-2017-14461].
* gnu/packages/mail.scm (dovecot): Update to 2.3.0.1.
[source]: Remove upstreamed patch.
* gnu/packages/patches/dovecot-CVE-2017-15132.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-02-28 22:58:23 +01:00
Marius Bakke
53453d7acc
gnu: wavpack: Fix CVE-2018-6767.
* gnu/packages/patches/wavpack-CVE-2018-6767.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/audio.scm (wavpack)[source](patches): Add it.
2018-02-28 20:29:46 +01:00
Marius Bakke
b39667cdcb
gnu: python-mox3: Update to 0.24.0.
* gnu/packages/openstack.scm (python-mox3): Update to 0.24.0.
[source](patches): New field.
[arguments]: Remove.
[native-inputs]: Add PYTHON-OPENSTACKDOCSTHEME and PYTHON-SUBUNIT.  Replace
PYTHON-SPHINX with PYTHON-SPHINX-1.6.  Move PYTHON-PBR and PYTHON-FIXTURES ...
[propagated-inputs]: ... here.  New field.
[description]: Don't mention explicit Python versions.
* gnu/packages/patches/python-mox3-python3.6-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2018-02-28 13:59:00 +01:00
Tobias Geerinckx-Rice
1143450c14
gnu: dblatex: Update to 0.3.10.
* gnu/packages/docbook.scm (dblatex): Update to 0.3.10.
[source]: Remove patch.
* gnu/packages/patches/dblatex-remove-multirow.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-02-28 04:13:19 +01:00
Oleg Pykhalov
e1cf4fd2d2
services: cgit: Add more configuration fields.
* gnu/services/version-control.scm (cgit-service-type): Move to separate file.
* gnu/services/cgit.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add this.
* gnu/tests/version-control.scm: Add this.
* doc/guix.texi (Cgit Service): Document this.
2018-02-28 04:40:56 +03:00
Tobias Geerinckx-Rice
d5d7d26df7
gnu: perl-gd: Update to 2.68.
* gnu/packages/gd.scm (perl-gd): Update to 2.68.
[source]: Remove obsolete patch.
[native-inputs]: Remove perl-module-build.
[inputs]: Use canonical package names and order alphabetically.
[arguments]: Replace #:module-build-flags with fewer #:make-maker-flags,
enable #:tests?, and remove ‘clear-autogenerated-files’ phase.
* gnu/packages/patches/perl-gd-options-passthrough-and-fontconfig.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-02-27 16:49:58 +01:00
Marius Bakke
2115bde302
gnu: python-parse: Update to 1.8.2.
* gnu/packages/patches/python-parse-too-many-fields.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/python.scm (python-parse): Update to 1.8.2.
[source](patches): Remove.
[arguments]: Use INVOKE instead of SYSTEM*.
2018-02-26 02:39:15 +01:00
Alex ter Weele
f61682e7ea
gnu: Add agda.
* gnu/packages/agda.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add adga.scm.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2018-02-26 01:42:35 +01:00
Marius Bakke
5697897537
gnu: json-glib: Fix 32-bit test failures.
* gnu/packages/patches/json-glib-fix-tests-32bit.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/gnome.scm (json-glib)[source](patches): New field.
2018-02-25 04:28:21 +01:00
Kei Kebreau
0181df537f
gnu: wxmaxima: Update to 18.02.0.
* gnu/packages/maths.scm (wxmaxima): Update to 18.02.0.
[source]: Add patch.
[build-system]: Use the cmake-build-system.
[native-inputs]: Remove autoconf and automake.
[arguments]: Disable tests, remove 'autoconf' phase.
* gnu/packages/patches/wxmaxima-do-not-use-old-gnuplot-parameters.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-02-24 18:05:52 -05:00
Marius Bakke
5f9b018aa8
Merge branch 'master' into staging 2018-02-24 19:04:13 +01:00
Oleg Pykhalov
d5ee4342c0
gnu: Add perl-regexp-pattern-license.
* gnu/packages/license.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add this.
2018-02-24 20:01:29 +03:00
Clément Lassieur
60628f5452
gnu: password-store: Fix compatibility with GnuPG 2.2.5.
* gnu/packages/patches/password-store-gnupg-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/password-utils.scm (password-store)[source]: Use it.
2018-02-24 12:57:39 +01:00
Marius Bakke
65f704f373
gnu: wavpack: Fix CVE-2018-7253 and CVE-2018-7254.
* gnu/packages/patches/wavpack-CVE-2018-7253.patch,
gnu/packages/patches/wavpack-CVE-2018-7254.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
* gnu/packages/audio.scm (wavpack)[source](patches): Use them.
2018-02-23 20:40:51 +01:00
Tobias Geerinckx-Rice
bbf8832f16
gnu: optipng: Update to 0.7.7 [security fixes].
This release claims to fix 2 vulnerabilities:
- ‘an integer overflow vulnerability in the TIFF decoder’
  (CVE-2017-1000229, previously patched in Guix), and
- ‘a buffer overflow vulnerability in the GIF decoder’.

* gnu/packages/image.scm (optipng): Update to 0.7.7.
[source]: Remove patch.
[arguments]: Substitute INVOKE for SYSTEM* and end phase with #t.
* gnu/packages/patches/optipng-CVE-2017-1000229.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-02-23 16:00:04 +01:00
Rutger Helling
6352e99437
gnu/local.mk: Add emulators.scm.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add emulators.scm.
2018-02-22 09:16:19 +01:00
Tobias Geerinckx-Rice
79f0561f43
gnu: htop: Fix tree view.
* gnu/packages/patches/htop-fix-process-tree.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/admin.scm (htop)[source]: Use it.
2018-02-21 15:02:49 +01:00
Pjotr Prins
1b541c3e93
gnu: ldc: Update to 1.7.0.
Fixes recent bootstrap and updates ldc and package manager to match.

* gnu/packages/ldc.scm (ldc-bootstrap): Update to 0.17.4.
[properties]: Add max-slient-time.
[arguments]<#:phases>[patch-phobos]: Update patches (see below).
(ldc): Update to 1.7.0.
(ldc-beta): Delete variable.
[arguments]<#:phases>[patch-phobos]: Update patches (see below).
[arguments]<#:phases>[check]: Use invoke.
(rdmd): Update to 2.077.1.
(dub): Update to 1.7.2.
* gnu/local.mk (dist_patch_DATA): Remove "ldc-disable-tests.patch".
Add "ldc-bootstrap-disable-tests.patch".
Remove "ldc-1.1.0-disable-phobos-tests.patch".
Add "ldc-1.7.0-disable-phobos-tests.patch".
Remove "ldc-1.1.0-disable-dmd-tests.patch".

Co-Authored-By: Danny Milosavljevic <dannym@scratchpost.org>
2018-02-20 19:36:34 +01:00
Marius Bakke
5fa6b52a54
gnu: qemu: Update to 2.11.1.
* gnu/packages/patches/qemu-CVE-2017-15038.patch,
gnu/packages/patches/qemu-CVE-2017-15289.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/packages/virtualization.scm (qemu): Update to 2.11.1
[source](patches): Remove.
2018-02-20 17:44:43 +01:00
Marius Bakke
7f69459aca
Merge branch 'master' into staging 2018-02-20 17:36:56 +01:00
Marius Bakke
b1989c1250
gnu: freetype: Fix CVE-2018-6942.
* gnu/packages/patches/freetype-CVE-2018-6942.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/fontutils.scm (freetype)[replacement]: New field.
(freetype/fixed): New variable.
2018-02-20 16:26:20 +01:00
Marius Bakke
f55ef78b5c
gnu: gtk+@2: Update to 2.24.32.
* gnu/packages/patches/gtk2-fix-failing-test.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/gtk.scm (gtk+-2): Update to 2.24.32.
[source]: Remove 'gtk2-fix-failing-test.patch'.
2018-02-20 14:55:58 +01:00
okapi
2922852e86
gnu: Add gzdoom.
* gnu/packages/games.scm (gzdoom): New variable.
* gnu/packages/patches/gzdoom-search-in-installed-share.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-02-19 00:33:34 +01:00
Hartmut Goebel
431ff8bea3
gnu: kde-frameworks: Update to 5.42.0 resp. 5.42.1
Beside simple updating:
- Change all todo-comments for test-cases into "fixme" comments to make them
  easier to find.
- breeze-icons: Blacklist a test failing at build.kde.org, too.
- extra-cmake-modules: Patch out a vanised test-case.
- kfilemetadata: Can now run the test-suite uninstalled. Blacklist a failing
  test-case.
- kimageformats: No longer symlink plugins into ./bin for testing.
- ktexteditor: Remove now unused patch.
- plasma-framework: Add input kirigami
- sonnet: For testing set QT_QPA_PLATFORM=offscreen.

* gnu/packages/kde-frameworks.scm (attica, baloo, bluez-qt, kactivities,
  kactivities-stats, kapidox, karchive, kauth, kbookmarks, kcmutils, kcodecs,
  kcompletion, kconfig, kconfigwidgets, kcoreaddons, kcrash, kdbusaddons,
  kde-frameworkintegration, kdeclarative, kded, kdelibs4support,
  kdesignerplugin, kdesu, kdewebkit, kdnssd, kdoctools, kemoticons,
  kglobalaccel, kguiaddons, khtml, ki18n, kiconthemes, kidletime, kinit, kio,
  kirigami, kitemmodels, kitemviews, kjobwidgets, kjs, kjsembed, kmediaplayer,
  knewstuff, knotifications, knotifyconfig, kpackage, kparts, kpeople,
  kplotting, kpty, kross, krunner, kservice, ksyntaxhighlighting,
  ktextwidgets, kunitconversion, kwallet, kwayland, kwindowsystem, kxmlgui,
  kxmlrpcclient, modemmanager-qt, networkmanager-qt, oxygen-icons,
  prison, solid, threadweaver): Update to 5.42.0.
  (kwidgetsaddons): Update to 5.42.1.
  (breeze-icons): Update to 5.42.0. [#:phases]<disable-failing-test> New
  phase.
  (extra-cmake-modules): Update to 5.42.0.
  [#:phases]<post-5.42.0-release-fix>: New phase.
  (kfilemetadata): Update to 5.42.0. [#:phases]: No longer move check behind
  install. [#:phases]<check-setup> Remove. [#:phase]<disable-failing-test> New
  phase.
  (kimageformats): Update to 5.42.0. [#:phases]<check-setup>: No longer
  symlink plugins into ./bin.
  (ktesteditor)[source]: Remove patch.
  (plasma-framework)[inputs]: Add  kirigami
  (sonnet): Update to 5.42.0. [#:phases]<check-setup> New phase.
* gnu/packages/patches/ktexteditor-5.39.0-autotests-dependencies.patch:
  Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-02-18 19:21:35 +01:00
Hartmut Goebel
64f390a409
gnu: qtbase: Use the store paths for other packages and dynamically loaded libs.
Transfer the applicable NixOS patches as of 2018-01-19:

- Not adopted: We don't change the .cmake.in and .prf, but use config
  mechanisms provided by th Qt build system.

- src/corelib/tools/qtimezoneprivate_tz.cpp: Adopted patch: Use $TZDIR to
  search for time-zone data. Thus avoid depending on package "tzdata", which
  often introduces changes with near-immediate effects, so it's important to
  be able to update it fast.

- src/corelib/kernel/qcoreapplication.cpp: Not adopted: NixOS adds plugin
  paths derived from PATH. We do not need this, since we already have
  native-search-path QT_PLUGIN_PATH.

- src/network/kernel/qdnslookup_unix.cpp,
  src/network/kernel/qhostinfo_unix.cpp: Transferred: Use hard-coded path to
  libresolv.

- src/network/ssl/qsslcontext_openssl.cpp: Not adopted: NixOS changes a
  conditional compilation for Qt 5.9 (but leaves it unchanged for Qt 5.10) to
  fix compilation with libressl.  But Qt does not support libressl anway, see
  config.tests/openssl/openssl.cpp in qtbase 5.9.4.

- src/plugins/platforminputcontexts/compose/generator/qtablegenerator.cpp:
  Transferred: Use hard-coded path to libx11.

- src/plugins/platforms/xcb/gl_integrations/xcb_glx/qglxintegration.cpp:
  Transferred: Use hard-coded path to mess's libGL, no need for a fall-back.

- src/plugins/platforms/xcb/qxcbcursor.cpp: Transferred: Use hard-coded path
  to Xcursor.

- src/plugins/platformthemes/gtk3/main.cpp: Not adopted: NixOS changes
  $XDG_DATA_DIRS and $GIO_EXTRA_MODULES in the code. We already have a
  search-path-specification for this.

- src/testlib/qtestassert.h: Decided not to adopt this for guix.

* gnu/packages/patches/qtbase-use-TZDIR.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/qt.scm (qtbase): Add comment. [source]: Use new patch.
  [arguments]<#:phases>'patch-paths': New phase.
2018-02-18 18:39:18 +01:00
Ludovic Courtès
3f3c0ab434
gnu: mailutils: Fix uninitialized memory bug.
This was causing segfaults in the MH test suite when building with
glibc 2.26 on x86_64.

* gnu/packages/patches/mailutils-uninitialized-memory.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/mail.scm (mailutils)[source](patches, snippet): New
fields.
[native-inputs]: New field.
2018-02-18 00:48:17 +01:00
Ludovic Courtès
d65930708f
gnu: gcc@4.9: Fix libsanitizer compilation with glibc 2.26.
* gnu/packages/patches/gcc-4.9-libsanitizer-fix.patch: New file.
* gnu/packages/gcc.scm (gcc-4.9)[source](patches): Add it.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-02-18 00:48:16 +01:00
Ricardo Wurmus
ff9d1a2f0c
Merge branch 'master' into core-updates 2018-02-18 00:39:25 +01:00
Marius Bakke
26176bee23
gnu: python-waitress: Update to 1.1.0.
* gnu/packages/patches/python-waitress-fix-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/python.scm (python-waitress): Update to 1.1.0.
[source](patches): New field.
2018-02-17 20:49:39 +01:00
Ben Woodcroft
bb3359ab8e
gnu: ruby-2.4.3: Update rubygems to 2.7.6.
This fixes the security issues described at
https://www.ruby-lang.org/en/news/2018/02/17/multiple-vulnerabilities-in-
rubygems/

* gnu/packages/patches/ruby-rubygems-276-for-ruby24.patch: New file.
* gnu/packages/ruby.scm (ruby-2.4.3)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-02-18 00:48:50 +10:00
Mark H Weaver
150062f190
Merge branch 'master' into core-updates 2018-02-16 13:14:26 -05:00
Danny Milosavljevic
f6cccefed5
gnu: ghc: Make memory allocator decommit memory on Linux < 4.5.
* gnu/packages/patches/ghc-8.0-fall-back-to-madv_dontneed.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/haskell.scm (ghc-8): Use it.
2018-02-16 12:41:01 -05:00
Danny Milosavljevic
a124e4258a
gnu: ghc: Make memory allocator decommit memory on Linux < 4.5.
* gnu/packages/patches/ghc-8.0-fall-back-to-madv_dontneed.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/haskell.scm (ghc-8): Use it.
2018-02-15 17:27:50 +01:00
Pierre Langlois
6ca15c9ef6
gnu: crypto++: Update to 6.0.0.
* gnu/packages/crypto.scm (crypto++): Update to 6.0.0.
* gnu/packages/patches/crypto++-fix-dos-in-asn.1-decoders.patch: Delete
file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-02-15 10:23:42 +01:00
Mark H Weaver
02843215d8
gnu: shepherd: 'herd status' now sorts the result.
Add a patch by Ludovic Courtès <ludo@gnu.org> from the upstream
shepherd repository to partially fix <https://bugs.gnu.org/30299>.

* gnu/packages/patches/shepherd-herd-status-sorted.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/admin.scm (shepherd)[source]: Add patch.
2018-02-14 03:42:02 -05:00
Mark H Weaver
288b8fd5e9
Merge branch 'master' into core-updates 2018-02-13 13:17:15 -05:00
Rutger Helling
6963305ce5
gnu: local.mk: Remove mpv patch lines.
* gnu/local.mk: Remove mpv CVE-2018-6360 patch lines.
2018-02-13 10:35:00 +01:00
Mark H Weaver
a7fb298665
Merge branch 'master' into core-updates 2018-02-11 04:05:07 -05:00
Leo Famulari
31c7002b46
gnu: libtasn1: Fix CVE-2018-6003.
* gnu/packages/patches/libtasn1-CVE-2018-6003.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/tls.scm (libtasn1/fixed)[source]: Use it.
2018-02-10 23:01:56 -05:00
Leo Famulari
79cf105304
gnu: libtiff: Fix CVE-2017-{9935,11335,18013}.
* gnu/packages/patches/libtiff-CVE-2017-9935.patch,
gnu/packages/patches/libtiff-CVE-2017-11335.patch,
gnu/packages/patches/libtiff-CVE-2017-18013.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/image.scm (libtiff)[replacement]: New field.
(libtiff/fixed): New variable.
2018-02-10 22:58:19 -05:00
Julien Lepiller
6d0368eb84
gnu: Add java-xerces.
* gnu/packages/java.scm (java-xerces): New variable.
* gnu/packages/patches/java-xerces-bootclasspath.patch: New file.
* gnu/packages/patches/java-xerces-build_dont_unzip.patch: New file.
* gnu/packages/patches/java-xerces-xjavac_taskdef.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add them.
2018-02-10 19:04:04 +01:00
Oleg Pykhalov
61995dce50
gnu: emacs-browse-at-remote: Patch for GNU Cgit support.
* gnu/packages/patches/emacs-browse-at-remote-cgit-gnu.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/emacs.scm (emacs-browse-at-remote)[source](patches): Use it.
2018-02-09 22:15:21 +03:00
Pierre Langlois
af414f34fb
gnu: clementine: Remove Spotify downloader.
Clementine has a button in the preference menu that allows downloading a
binary blob to add support for Spofify.  Let's remove this button.  It turns
out this is the only part of the code base that uses crypto++, let's remove
this dependency too.

* gnu/packages/music.scm (clementine)[arguments]: Remove crypto++ support. Set
HAVE_SPOTIFY_DOWNLOADER to FALSE.
[inputs]: Remove crypto++ input.
* gnu/packages/patches/clementine-remove-crypto++-dependency.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Leo Famulari <leo@famulari.name>
2018-02-09 13:32:08 -05:00
Marius Bakke
165c8b2adc
gnu: zziplib: Update to 0.13.68.
* gnu/packages/patches/zziplib-CVE-2017-5974.patch,
gnu/packages/patches/zziplib-CVE-2017-5975.patch,
gnu/packages/patches/zziplib-CVE-2017-5976.patch,
gnu/packages/patches/zziplib-CVE-2017-5978.patch,
gnu/packages/patches/zziplib-CVE-2017-5979.patch,
gnu/packages/patches/zziplib-CVE-2017-5981.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/packages/compression.scm (zziplib): Update to 0.13.68.
[source](patches): Remove.
[arguments]: Remove #:parallel-tests?.  Set #:tests? #f.
2018-02-09 16:43:49 +01:00
Marius Bakke
ce2cfcabfc
gnu: python-pandas: Update to 0.22.0.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/patches/python-pandas-skip-failing-tests.patch: Delete file.
* gnu/packages/python.scm (python-pandas): Update to 0.22.0.
[source](patches): Remove.
[native-inputs]: Add PYTHON-PYTEST and PYTHON-LXML.
[arguments]: Replace CHECK-PHASE with custom pytest invocation.
[home-page]: Use HTTPS.
2018-02-09 14:44:49 +01:00
Arun Isaac
a76acfd3f5
gnu: services: Add wesnothd service.
* gnu/services/games.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi (Game Services): Document the service.
2018-02-09 14:55:17 +05:30
Mark H Weaver
110afddee8
gnu: icecat: Use system harfbuzz and graphite2 libraries.
* gnu/packages/patches/icecat-use-system-harfbuzz.patch,
gnu/packages/patches/icecat-use-system-graphite2.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/gnuzilla.scm (icecat)[source]: Add patches.  Delete
"gfx/harfbuzz" and "gfx/graphite2" in the snippet.
[inputs]: Add harfbuzz and graphite2.
[arguments]: Add "--with-system-harfbuzz" and "--with-system-graphite2" to
configure-flags.
2018-02-09 01:53:07 -05:00
Mark H Weaver
efe2a2833c
Merge branch 'master' into core-updates 2018-02-09 01:46:34 -05:00
Alex Vong
e61da2e884
gnu: mpv: Fix CVE-2018-6360.
* gnu/packages/patches/mpv-CVE-2018-6360-1.patch,
gnu/packages/patches/mpv-CVE-2018-6360-2.patch,
gnu/packages/patches/mpv-CVE-2018-6360-3.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/video.scm (mpv)[source]: Use them.

Signed-off-by: Leo Famulari <leo@famulari.name>
2018-02-08 15:18:21 -05:00
Tobias Geerinckx-Rice
f81b6e7703
gnu: libtirpc: Update to 1.0.2.
* gnu/packages/onc-rpc.scm (libtirpc): Update to 1.0.2.
[patches]: Remove patch for fixed CVE.
* gnu/packages/patches/libtirpc-CVE-2017-8779.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-02-08 18:21:08 +01:00
Tobias Geerinckx-Rice
906f1b48e2
gnu: luajit: Update to 2.1.0-beta3.
* gnu/packages/lua.scm (luajit): Update to 2.1.0-beta3.
[source]: Remove symlinks patch.
* gnu/packages/patches/luajit-symlinks.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-02-08 05:01:42 +01:00
Leo Famulari
0b18c0b0de
gnu: mupdf: Fix CVE-2017-17858.
* gnu/packages/patches/mupdf-CVE-2017-17858.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/pdf.scm (mupdf)[source]: Use it.
2018-02-07 21:17:57 -05:00
Ludovic Courtès
71e789319c
gnu: hwloc: Add 2.0.0.
* gnu/packages/mpi.scm (hwloc-2.0): New variable.
* gnu/packages/patches/hwloc-tests-without-sysfs.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-02-06 17:34:34 +01:00
Mathieu Othacehe
924b96db0a
gnu: gpsbabel: Update to 1.5.4 and fix build.
* gnu/packages/patches/gpsbabel-minizip.patch: New file.
* gnu/packages/patches/gpsbabel-qstring.patch: New file.
* gnu/local.mk (dist_patch_DATA): Update accordingly.
* gnu/packages/gps.scm (gpsbabel): Update to 1.5.4,
[source]: add two previous patches to fix build,
[snippet]: remove "gpsbabel" directory excursion,
[arguments]: ditto.
2018-02-06 15:50:09 +01:00
Leo Famulari
a630c64709
gnu: p7zip: Fix CVE-2017-17969.
* gnu/packages/patches/p7zip-CVE-2017-17969.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/compression.scm (p7zip)[source]: Use it.
2018-02-05 16:21:40 -05:00
Marius Bakke
bee7bb315c
Merge branch 'master' into core-updates 2018-02-01 13:18:47 +01:00
Leo Famulari
547c4bd23c
gnu: transmission: Update to 2.93.
* gnu/packages/bittorrent.scm (transmission): Update to 2.93.
[source]: Update URL and remove patch.
* gnu/packages/patches/transmission-fix-dns-rebinding-vuln.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-01-31 19:21:51 -05:00
Adam Van Ymeren
51f887f33d
gnu: python-axolotl: Update to 0.1.39 and fix build.
python-axolotl has been failing since March,
https://hydra.gnu.org/job/gnu/master/python-axolotl-0.1.35.x86_64-linux

This also fixes the OMEMO and OTR plugins for Gajim work.

* gnu/packages/patches/python-axolotl-AES-fix.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python-crypto.scm (python-axolotl): Upgrade to 0.1.39.
[source]: Use the patch.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-01-31 17:36:22 +01:00
Ludovic Courtès
6ec8a3cc95
gnu: Add Enki.
* gnu/packages/robotics.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2018-01-30 16:40:29 +01:00
Tobias Geerinckx-Rice
b598965866
gnu: rsync: Update to 3.1.3.
* gnu/packages/rsync.scm (rsync): Update to 3.1.3.
[source]: Remove patches for fixed CVEs.
[properties]: Remove field.
* packages/patches/rsync-CVE-2017-16548.patch: Delete file.
* packages/patches/rsync-CVE-2017-17433.patch: Delete file.
* packages/patches/rsync-CVE-2017-17433-fix-tests.patch: Delete file.
* packages/patches/rsync-CVE-2017-17434-pt1.patch: Delete file.
* packages/patches/rsync-CVE-2017-17434-pt2.patch: Likewise.
* gnu/local.mk (dist_patch_DATA): Remove them.
2018-01-30 09:25:35 +01:00
Mark H Weaver
b89d8a4271
Merge branch 'master' into core-updates 2018-01-26 00:15:26 -05:00
Tobias Geerinckx-Rice
218b94f3b8
gnu: reposurgeon: Update to 3.43.
* gnu/packages/version-control.scm (reposurgeon): Update to 3.43.
[source]: Add a patch needed to build the package.
[arguments]: Add ‘patch-inputs’ phase.
[native-inputs]: Replace docbook-xml-4.1.2 with the latest docbook-xml.
[inputs]: Add tzdata.
* gnu/packages/patches/reposurgeon-add-missing-docbook-files.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-01-26 00:09:19 +01:00
Leo Famulari
238f3a39a0
gnu: dovecot: Fix CVE-2017-15132.
* gnu/packages/patches/dovecot-CVE-2017-15132.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/mail.scm (dovecot)[source]: Use it.
2018-01-25 13:37:19 -05:00
Ricardo Wurmus
7bf0170e9f
gnu: Update SELinux packages.
* gnu/packages/selinux.scm (libsepol): Update to 2.7, release 20170804.
[source]: Fetch from git.
(checkpolicy)[arguments]: Set LIBSEPOLA.
(libselinux)[arguments]: Likewise; remove build phase "patch-libsepol-path".
(python-sepolgen)[arguments]: Adjust directory name in "enter-dir".
(python-setools): Update to 4.1.1.
[source]: Fetch from git.
(policycoreutils)[source]: Remove patch.
[arguments]: Remove build phases "fix-glib-cflags",
"fix-linkage-with-libsepol", "fix-target-paths", and "wrap-python-tools".
[inputs]: Remove python-wrapper, python-sepolgen, python-setools, python-ipy,
libcap-ng, pcre, dbus, dbus-glib, and glib.
* gnu/packages/patches/policycoreutils-make-sepolicy-use-python3.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-01-25 00:36:57 +01:00
Ricardo Wurmus
ca56021c26
gnu: Update SELinux packages.
* gnu/packages/selinux.scm (libsepol): Update to 2.7, release 20170804.
[source]: Fetch from git.
(checkpolicy)[arguments]: Set LIBSEPOLA.
(libselinux)[arguments]: Likewise; remove build phase "patch-libsepol-path".
(python-sepolgen)[arguments]: Adjust directory name in "enter-dir".
(python-setools): Update to 4.1.1.
[source]: Fetch from git.
(policycoreutils)[source]: Remove patch.
[arguments]: Remove build phases "fix-glib-cflags",
"fix-linkage-with-libsepol", "fix-target-paths", and "wrap-python-tools".
[inputs]: Remove python-wrapper, python-sepolgen, python-setools, python-ipy,
libcap-ng, pcre, dbus, dbus-glib, and glib.
* gnu/packages/patches/policycoreutils-make-sepolicy-use-python3.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-01-25 00:36:26 +01:00
Mark H Weaver
78dfc16139
Merge branch 'master' into core-updates 2018-01-24 06:23:33 -05:00
Mark H Weaver
52009dc3bd
gnu: icecat: Add more fixes from upstream mozilla-esr52.
Includes fixes for CVE-2018-5104, CVE-2018-5097, CVE-2018-5099, and the
remaining 7 out of 21 changesets for CVE-2018-5089.

* gnu/packages/gnuzilla.scm (icecat)[source]: Add selected fixes from the
upstream mozilla-esr52 repository.  Remove the local spectre mitigation patch
in favor of the (identical) changeset from upstream.
* gnu/packages/patches/icecat-bug-1427870-spectre-mitigation.patch: Delete.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-01-24 05:59:01 -05:00
Mark H Weaver
a102d359a6
Merge branch 'master' into core-updates 2018-01-23 17:01:07 -05:00
Leo Famulari
c73a00a376
gnu: libsndfile: Fix CVE-2017-12562.
* gnu/packages/patches/libsndfile-CVE-2017-12562.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/pulseaudio.scm (libsndfile)[replacement]: New field.
(libsndfile/fixed): New variable.
2018-01-23 15:25:32 -05:00
Fis Trivial
457fc22dd3
gnu: rtags: Fix the bundling issue.
* gnu/packages/patches/rtags-separate-rct.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/code.scm (rtags): Dependencies no longer bundled.
[source]: Use tarball release.  Use the patch to link rct.
Substitute corresponding headers.
[native-inputs]: Add new dependencies.
[inputs]: Likewise.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-01-23 10:43:37 +01:00
Fis Trivial
a893dc2f48
gnu: rct: Add missing headers, enable RTTI.
* gnu/packages/patches/rct-add-missing-headers.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/cpp.scm (rct): Use the patch, enable RTTI.
[source]: Use the patch to add missing headers from installation.
[arguments]: Enable RTTI in configure-flags.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-01-23 10:28:27 +01:00
Kei Kebreau
75033216ea
gnu: clisp: Fix build with glibc 2.26.
* gnu/packages/patches/clisp-glibc-2.26.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/lisp.scm (clisp)[source]: Use it.
2018-01-20 21:48:47 -05:00