ryan77627/guix
1
0
Fork 0
mirror of https://git.in.rschanz.org/ryan77627/guix.git synced 2024-11-08 07:56:16 -05:00
Code Issues Projects Releases Packages Wiki Activity Actions
70373 commits 1 branch 0 tags 448 MiB
Commit graph

62346 commits

Author SHA1 Message Date
zimoun
63572b0c12
gnu: r-bayseq: Update to 2.24.0. 
* gnu/packages/bioconductor.scm (r-bayseq): Update to 2.24.0.
 2020-12-09 12:12:22 +01:00
zimoun
3b6484097c
gnu: r-qdnaseq: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-qdnaseq): Update to 1.26.0.
 2020-12-09 12:12:22 +01:00
zimoun
724000356e
gnu: r-cghcall: Update to 2.52.0. 
* gnu/packages/bioconductor.scm (r-cghcall): Update to 2.52.0.
 2020-12-09 12:12:22 +01:00
zimoun
ee052d05f1
gnu: r-cghbase: Update to 1.50.0. 
* gnu/packages/bioconductor.scm (r-cghbase): Update to 1.50.0.
 2020-12-09 12:12:22 +01:00
zimoun
6e6c627230
gnu: r-marray: Update to 1.68.0. 
* gnu/packages/bioconductor.scm (r-marray): Update to 1.68.0.
 2020-12-09 12:12:22 +01:00
zimoun
d068d96743
gnu: r-chippeakanno: Update to 3.24.0. 
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.24.0.
 2020-12-09 12:12:21 +01:00
zimoun
f519b4dc01
gnu: r-graph: Update to 1.68.0. 
* gnu/packages/bioconductor.scm (r-graph): Update to 1.68.0.
 2020-12-09 12:12:21 +01:00
zimoun
1e6920c521
gnu: r-multtest: Update to 2.46.0. 
* gnu/packages/bioconductor.scm (r-multtest): Update to 2.46.0.
 2020-12-09 12:12:21 +01:00
Roel Janssen
341ebaaa01
gnu: r-diffbind: Update to 3.0.7. 
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.0.7.
[propagated-inputs]: Add r-apeglm, r-ashr, and r-greylistchip; remove r-edger.
 2020-12-09 12:12:21 +01:00
Roel Janssen
6e396c4bff
gnu: Add r-greylistchip. 
* gnu/packages/bioconductor.scm (r-greylistchip): New variable.
 2020-12-09 12:12:21 +01:00
Roel Janssen
c84762c446
gnu: Add r-ashr. 
* gnu/packages/cran.scm (r-ashr): New variable.
 2020-12-09 12:12:21 +01:00
Roel Janssen
755d16a3b0
gnu: Add r-mixsqp. 
* gnu/packages/cran.scm (r-mixsqp): New variable.
 2020-12-09 12:12:21 +01:00
Roel Janssen
deda2319f7
gnu: Add r-etrunct. 
* gnu/packages/cran.scm (r-etrunct): New variable.
 2020-12-09 12:12:21 +01:00
Roel Janssen
a7f4a8b4d0
gnu: Add r-invgamma. 
* gnu/packages/cran.scm (r-invgamma): New variable.
 2020-12-09 12:12:21 +01:00
Roel Janssen
3b399e514f
gnu: Add r-apeglm. 
* gnu/packages/bioconductor.scm (r-apeglm): New variable.
 2020-12-09 12:12:21 +01:00
Roel Janssen
a0df9b93ef
gnu: Add r-rcppnumerical. 
* gnu/packages/bioconductor.scm (r-rcppnumerical): New variable.
 2020-12-09 12:12:21 +01:00
zimoun
e9b60a2901
gnu: r-qvalue: Update to 2.22.0. 
* gnu/packages/bioconductor.scm (r-qvalue): Update to 2.22.0.
 2020-12-09 12:12:21 +01:00
zimoun
9af6fdf861
gnu: r-oligo: Update to 1.54.0. 
* gnu/packages/bioconductor.scm (r-oligo): Update to 1.54.0.
 2020-12-09 12:12:21 +01:00
zimoun
464df5ccbb
gnu: r-oligoclasses: Update to 1.52.0. 
* gnu/packages/bioconductor.scm (r-oligoclasses): Update to 1.52.0.
 2020-12-09 12:12:21 +01:00
zimoun
d72c4c98c8
gnu: r-geneplotter: Update to 1.68.0. 
* gnu/packages/bioconductor.scm (r-geneplotter): Update to 1.68.0.
 2020-12-09 12:12:20 +01:00
zimoun
c03c76344e
gnu: r-reportingtools: Update to 2.30.0. 
* gnu/packages/bioconductor.scm (r-reportingtools): Update to 2.30.0.
 2020-12-09 12:12:20 +01:00
zimoun
d1ff3604b7
gnu: r-regioner: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.22.0.
 2020-12-09 12:12:20 +01:00
zimoun
fa7578b32f
gnu: r-hpar: Update to 1.32.1. 
* gnu/packages/bioconductor.scm (r-hpar): Update to 1.32.1.
 2020-12-09 12:12:20 +01:00
zimoun
7d56302332
gnu: r-annotate: Update to 1.68.0. 
* gnu/packages/bioconductor.scm (r-annotate): Update to 1.68.0.
[propagated-inputs]: Remove 'r-rcurl', add 'r-httr'.
 2020-12-09 12:12:20 +01:00
zimoun
8e6a2c328f
gnu: r-affxparser: Update to 1.62.0. 
* gnu/packages/bioconductor.scm (r-affxparser): Update to 1.62.0.
 2020-12-09 12:12:20 +01:00
zimoun
a92219b45f
gnu: r-affycoretools: Update to 1.62.0. 
* gnu/packages/bioconductor.scm (r-affycoretools): Update to 1.62.0.
 2020-12-09 12:12:20 +01:00
zimoun
3e82f9ccaf
gnu: r-affycontam: Update to 1.48.0. 
* gnu/packages/bioconductor.scm (r-affycontam): Update to 1.48.0.
 2020-12-09 12:12:20 +01:00
zimoun
fa2d16cc27
gnu: r-affycompatible: Update to 1.50.0. 
* gnu/packages/bioconductor.scm (r-affycompatible): Update to 1.50.0.
 2020-12-09 12:12:20 +01:00
zimoun
c472549f67
gnu: r-affycomp: Update to 1.66.0. 
* gnu/packages/bioconductor.scm (r-affycomp): Update to 1.66.0.
 2020-12-09 12:12:20 +01:00
zimoun
aa311eaa74
gnu: r-biocgenerics: Update to 0.36.0. 
* gnu/packages/bioconductor.scm (r-biocgenerics): Update to 0.36.0.
 2020-12-09 12:12:20 +01:00
zimoun
70ab99096d
gnu: r-biocversion: Update to 3.12.0. 
* gnu/packages/bioconductor.scm (r-biocversion): Update to 3.12.0.
 2020-12-09 12:12:20 +01:00
zimoun
a3e2e53837
gnu: r-cummerbund: Update to 2.32.0. 
* gnu/packages/bioconductor.scm (r-cummerbund): Update to 2.32.0.
 2020-12-09 12:12:20 +01:00
zimoun
5ef637ddc7
gnu: r-coverageview: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-coverageview): Update to 1.28.0.
 2020-12-09 12:12:20 +01:00
zimoun
25f4e6520e
gnu: r-ideoviz: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-ideoviz): Update to 1.26.0.
 2020-12-09 12:12:20 +01:00
Efraim Flashner
533935ccf7
services: science.scm: Add missing copyright headers. 
This module was always supposed to have the GPL3 header in place.
Follow-up to 8f19e63f76.

* gnu/services/science.scm: Add Copyright headers.
 2020-12-09 12:55:02 +02:00
Guillaume Le Vaillant
53c480006b
gnu: monero-gui: Update to 0.17.1.6. 
* gnu/packages/finance.scm (monero-gui): Update to 0.17.1.6.
 2020-12-09 11:34:25 +01:00
Guillaume Le Vaillant
5560bd7b6b
gnu: monero: Update to 0.17.1.6. 
* gnu/packages/finance.scm (monero): Update to 0.17.1.6.
 2020-12-09 11:34:25 +01:00
elaexuotee@wilsonb.com
8e2aad26ae
gnu: Add lemonbar-xft. 
* gnu/packages/wm.scm (lemonbar-xft): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-09 09:10:33 +00:00
Ryan Prior
9941036559
gnu: Add go-github-com-aws-sdk. 
* gnu/packages/golang.scm (go-github-com-aws-sdk): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-12-09 09:45:35 +02:00
Ryan Prior
016501aec6
gnu: Add go-github-com-jmespath-go-jmespath. 
* gnu/packages/golang.scm (go-github-com-jmespath-go-jmespath): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-12-09 09:45:35 +02:00
Ryan Prior
f7c2896e52
gnu: Add go-github-com-go-sql-driver-mysql. 
* gnu/packages/golang.scm (go-github-com-go-sql-driver-mysql): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-12-09 09:45:31 +02:00
Leo Famulari
2b0185a74b
gnu: linux-libre 4.14: Update to 4.14.211. 
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.211.
(linux-libre-4.14-pristine-source): Update hash.
 2020-12-09 01:08:15 -05:00
Leo Famulari
a2eae5ec4a
gnu: linux-libre 4.19: Update to 4.19.162. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.162.
(linux-libre-4.19-pristine-source): Update hash.
 2020-12-09 01:08:15 -05:00
Leo Famulari
66b1b55148
gnu: linux-libre 5.4: Update to 5.4.82. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.82.
(linux-libre-5.4-pristine-source): Update hash.
 2020-12-09 01:08:14 -05:00
Leo Famulari
54f777ca4e
gnu: linux-libre: Update to 5.9.13. 
* gnu/packages/linux.scm (linux-libre-5.9-version): Update to 5.9.13.
(linux-libre-5.9-pristine-source): Update hash.
 2020-12-09 01:08:09 -05:00
Leo Famulari
02b21f35cc
gnu: OpenSSL: Update to 1.1.1i [fixes CVE-2020-1971]. 
* gnu/packages/tls.scm (openssl)[replacement]: Update replacement to 1.1.1i
(openssl-1.1.1g): Replace with ...
(openssl-1.1.1i): ... new variable.
 2020-12-08 19:48:09 -05:00
Ludovic Courtès
456421fc0f
gnu: guix: Update to 799f066. 
* gnu/packages/package-management.scm (guix): Update to 799f066.
 2020-12-08 23:38:04 +01:00
Ludovic Courtès
4a98735297
gnu: autotools: Add version 2.70. 
* gnu/packages/autotools.scm (autoconf): Rename to...
(autoconf-2.69): ... this.
(autoconf): Define as an alias for AUTOCONF-2.69.
(autoconf-2.70): New variable.
 2020-12-08 22:28:00 +01:00
Vincent Legoll
20e5658c04
gnu: ocaml-menhir: Update to 20200211. 
* gnu/packages/ocaml.scm (ocaml-menhir): Update to 20200211.
[build-system]: Switch from gnu to dune.
[arguments]: Remove phases and make-flags.
[native-inputs]: Remove field.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-08 20:18:11 +00:00
Efraim Flashner
2d1a621b8d
gnu: mruby: Update to 2.1.2. 
* gnu/packages/ruby.scm (mruby): Update to 2.1.2.
 2020-12-08 22:09:30 +02:00
L p R n d n
8a55a3994c
gnu: Add mypaint. 
* gnu/packages/image.scm (mypaint): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-08 20:06:38 +00:00
Christopher Baines
c9c3569ad9
gnu: libmypaint: Update to 1.6.1. 
Needed by mypaint@2.0.1.

* gnu/packages/gimp.scm (libmypaint): Update to 1.6.1.
 2020-12-08 20:06:34 +00:00
Leo Famulari
e1d3b07ffc
gnu: isync: Use OpenSSL 1.1. 
* gnu/packages/mail.scm (isync)[inputs]: Replace openssl-1.0 with openssl.
 2020-12-08 13:25:27 -05:00
Efraim Flashner
adbb62f16e
gnu: fcitx5-material-color-theme: Add source file-name. 
* gnu/packages/fcitx5.scm (fcitx5-material-color-theme)[source]: Add
file-name field.
 2020-12-08 18:14:31 +02:00
Zhu Zihao
af34f757ce
gnu: Add fcitx5-material-color-theme. 
* gnu/packages/fcitx5.scm (fcitx5-material-color-theme): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2020-12-08 20:31:47 +08:00
Zhu Zihao
ac1c7530d8
gnu: Add fcitx5-configtool. 
* gnu/packages/fcitx5.scm (fcitx5-configtool): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2020-12-08 20:31:47 +08:00
Zhu Zihao
9a23698ecd
gnu: Add fcitx5-chinese-addons. 
* gnu/packages/fcitx5.scm (fcitx5-chinese-addons): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2020-12-08 20:31:47 +08:00
Zhu Zihao
d4aca38b50
gnu: Add fcitx5-gtk. 
* gnu/packages/fcitx5.scm (fcitx5-gtk): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2020-12-08 20:31:47 +08:00
Zhu Zihao
4394d3721a
gnu: Add fcitx5-qt. 
* gnu/packages/fcitx5.scm (fcitx5-qt): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2020-12-08 20:31:47 +08:00
Zhu Zihao
69d3419ca3
gnu: Add libime. 
* gnu/packages/fcitx5.scm (libime): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2020-12-08 20:31:47 +08:00
Zhu Zihao
2d07803be8
gnu: Add fcitx5-lua. 
* gnu/packages/fcitx5.scm (fcitx5-lua): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2020-12-08 20:31:47 +08:00
Zhu Zihao
aa5cfb39a5
gnu: Add fcitx5. 
* gnu/packages/fcitx5.scm (fcitx5): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2020-12-08 20:31:47 +08:00
Zhu Zihao
ad6cf3d4ad
gnu: Add xcb-imdkit. 
* gnu/packages/fcitx5.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2020-12-08 20:31:47 +08:00
Mathieu Othacehe
770fb659a6
services: cuirass: Add queue-size option. 
* gnu/services/cuirass.scm (<cuirass-configuration>): Add "queue-size" field.
(cuirass-shepherd-service): Honor it.
* doc/guix.texi (Continuous Integration): Document it.
 2020-12-08 11:56:26 +01:00
Mathieu Othacehe
2dd4f389c7
gnu: cuirass: Update to 0.0.1-56.697fa14. 
* gnu/packages/ci.scm (cuirass): Update to 0.0.1-56.697fa14.
 2020-12-08 11:48:53 +01:00
Ryan Prior
ab58b2cc32
gnu: Add cjson. 
* gnu/packages/javascript.scm (cjson): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-08 09:26:46 +00:00
Ryan Prior
b5c51ae086
gnu: Add tiny-bignum. 
* gnu/packages/maths.scm (tiny-bignum): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-08 09:21:50 +00:00
Martin Becze
2d8deaa06e
gnu: trezord: Update to 2.0.30. 
* gnu/packages/finance.scm (trezord): Update to 2.0.30.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-08 08:50:43 +00:00
Martin Becze
2d9acf675a
gnu: Add go-gopkg-in-natefinch-lumberjack.v2. 
* gnu/packages/golang.scm (go-gopkg-in-natefinch-lumberjack.v2): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-08 08:50:43 +00:00
Martin Becze
2d0716e081
gnu: Add go-github-com-gorilla-csrf. 
* gnu/packages/golang.scm (go-github-com-gorilla-csrf): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-08 08:37:49 +00:00
Martin Becze
4368b9b2d7
gnu: Add go-github-com-gorilla-securecookie. 
* gnu/packages/golang.scm (go-github-com-gorilla-securecookie): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-08 08:37:49 +00:00
Martin Becze
d2a42cee0b
gnu: Add go-github-com-gorilla-handlers. 
* gnu/packages/golang.scm (go-github-com-gorilla-handlers): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-08 08:37:49 +00:00
Martin Becze
33504d4d70
gnu: Add go-github-com-felixge-httpsnoop. 
* gnu/packages/golang.scm (go-github-com-felixge-httpsnoop): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-08 08:37:44 +00:00
Martin Becze
836428c793
gnu: go-github-com-gorilla-mux: Update to 1.8.0. 
* gnu/packages/golang.scm (go-github-com-gorilla-mux): Update to 1.8.0.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-08 08:31:29 +00:00
Tobias Geerinckx-Rice
53cd301b08
gnu: scummvm: Update source URL. 
* gnu/packages/emulators.scm (scummvm)[source]: Use HTTPS & new
subdomain.

Reported by Matthew Brooks <matthewfbrooks@mailbox.org>.
 2020-12-08 08:46:54 +01:00
Michael Rohleder
dcf8dd2be5
gnu: gita: Install shell completions. 
* gnu/packages/version-control.scm (gita)[arguments]: Add phase
install-shell-completions.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
 2020-12-08 08:09:21 +03:00
Ryan Desfosses
b5e52d8225
gnu: Add emacs-burly. 
* gnu/packages/emacs-xyz.scm (emacs-burly): New variable.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
 2020-12-08 07:59:24 +03:00
Ryan Desfosses
fedf7d5721
gnu: Add emacs-map. 
* gnu/packages/emacs-xyz.scm (emacs-map): New variable.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
 2020-12-08 07:59:22 +03:00
Leo Prikler
403dda2e66
gnu: shadowsocks: Build against openssl. 
This patch allows shadowsocks to be used without supplying libopenssl in its
configuration.  See also https://unix.stackexchange.com/questions/623324/.

* gnu/packages/networking.scm (shadowsocks)[inputs]: Add openssl.
[#:phases]: Add patch-crypto-paths.

Signed-off-by: Marius Bakke <marius@gnu.org>
 2020-12-08 00:45:56 +01:00
Marius Bakke
adf0edadef
gnu: qoauth: Minor cosmetic improvements. 
* gnu/packages/web.scm (qoauth)[arguments]: Add #:tests?.  Don't delete
'check' phase.  Override 'configure' instead of adding new phase.
 2020-12-08 00:45:56 +01:00
Marius Bakke
627b70e3ac
gnu: qoauth: Fix build failure. 
Fixes <https://bugs.gnu.org/45031>.
Reported by Distopico <distopico@riseup.net>.

* gnu/packages/web.scm (qoauth)[arguments]: Add phase
'adjust-mkspecs-directory'.
 2020-12-08 00:45:56 +01:00
Marius Bakke
63be1a7dae
gnu: qca: Correct license. 
* gnu/packages/kde.scm (qca)[license]: Change from LGPL2.1 to LGPL2.1+.
 2020-12-08 00:45:56 +01:00
Oleg Pykhalov
608113c083
gnu: Add gita. 
* gnu/packages/version-control.scm (gita): New variable.
 2020-12-08 01:49:38 +03:00
Tobias Geerinckx-Rice
ac3af8f7ed
gnu: imapfilter: Update to 2.7.5. 
* gnu/packages/mail.scm (imapfilter): Update to 2.7.5.
 2020-12-07 23:44:36 +01:00
Nicolas Goaziou
f6b1288913
gnu: grammalecte: Update to 2.0.0. 
* gnu/packages/dictionaries.scm (grammalecte): Update to 2.0.0.
 2020-12-07 22:43:57 +01:00
Kei Kebreau
906fc9116f
gnu: Add glmark2. 
* gnu/packages/gl.scm (glmark2): New variable.
 2020-12-07 16:08:42 -05:00
Michael Rohleder
476f19f57a
gnu: xfce4-whiskermenu-plugin: Fix installed shell script. 
* gnu/packages/xfce.scm (xfce4-whiskermenu-plugin): Fix installed shell script.
[arguments]: Add phase fix-shell-script to substitute paths to xfce4-panel and
gettext.
[inputs]: Add gettext-minimal.

Co-authored-by: Kei Kebreau <kkebreau@posteo.net>
Signed-off-by: Kei Kebreau <kkebreau@posteo.net>
 2020-12-07 16:08:41 -05:00
Tobias Geerinckx-Rice
d2ff5931ab
gnu: bombadillo: Update to 2.3.3. 
* gnu/packages/web-browsers.scm (bombadillo): Update to 2.3.3.
 2020-12-07 21:52:22 +01:00
Tobias Geerinckx-Rice
df11cf2f66
gnu: qutebrowser: Update to 1.14.1. 
* gnu/packages/web-browsers.scm (qutebrowser): Update to 1.14.1.
 2020-12-07 21:52:22 +01:00
Tobias Geerinckx-Rice
5fb085da6b
gnu: yapet: Omit duplicate licence files. 
* gnu/packages/password-utils.scm (yapet)[arguments]: Set a better --docdir.
 2020-12-07 21:52:22 +01:00
Tobias Geerinckx-Rice
1385ac55a4
gnu: yapet: Update to 2.5. 
* gnu/packages/password-utils.scm (yapet): Update to 2.5.
 2020-12-07 21:52:22 +01:00
Tobias Geerinckx-Rice
8c0d6a533a
gnu: feh: Update to 3.6.1. 
* gnu/packages/image-viewers.scm (feh): Update to 3.6.1.
 2020-12-07 21:52:22 +01:00
Tobias Geerinckx-Rice
36e80e32f3
gnu: libmanette: Update to 0.2.6. 
* gnu/packages/games.scm (libmanette): Update to 0.2.6.
 2020-12-07 21:52:22 +01:00
Tobias Geerinckx-Rice
88a26bfd52
gnu: thermald: Update to 2.4.1. 
* gnu/packages/admin.scm (thermald): Update to 2.4.1.
 2020-12-07 21:52:22 +01:00
Nicolas Goaziou
08d8c2d3c0
gnu: emacs-moody: Update to 0.5.4. 
* gnu/packages/emacs-xyz.scm (emacs-moody): Update to 0.5.4.
 2020-12-07 17:02:10 +01:00
André Alexandre Gomes
985570ad30
gnu: Add emacs-modus-themes. 
* gnu/packages/emacs-xyz.scm (emacs-modus-themes): New variable.
(emacs-modus-operandi-theme, emacs-modus-vivendi-theme): Deprecate package in
favor of emacs-modus-themes.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2020-12-07 16:27:03 +01:00
Ludovic Courtès
aecd2a13cb
services: openssh: Warn about 'password-authentication?' default. 
Fixes <https://bugs.gnu.org/44808>.
Reported by Christopher Lemmer Webber <cwebber@dustycloud.org>.

* gnu/services/ssh.scm (true-but-soon-false): New procedure.
(<openssh-configuration>)[password-authentication?]: Change default to
'true-but-soon-false'.
* gnu/installer/services.scm (%system-services): Explicitly set
'password-authentication?' to #f.
 2020-12-07 12:48:26 +01:00
Ludovic Courtès
859b362f81
services: hurd-vm: Avoid circular dependency with (gnu system images hurd). 
* gnu/services/virtualization.scm (hurd-vm-disk-image): Use
'lookup-image-type-by-name' instead of referring to 'hurd-disk-image'
from (gnu system images hurd).
 2020-12-07 12:48:26 +01:00
Efraim Flashner
27cf238744
Revert "gnu: vim: Run more tests." 
This reverts commit 17a53aec7a.

This breaks building vim on ARM architectures.
 2020-12-07 12:48:07 +02:00
Efraim Flashner
3832704aff
gnu: minimap2: Fix build on aarch64-linux. 
* gnu/packages/bioinformatics.scm (minimap2)[arguments]: Adjust
configure-flags to be better per-architecture.
[source]: Add patch.
* gnu/packages/patches/minimap2-aarch64-support.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2020-12-07 12:48:07 +02:00
Efraim Flashner
f48cd014f3
gnu: minimap2: Prepare for cross compilation. 
* gnu/packages/bioinformatics.scm (minimap2)[arguments]: Use
cc-for-target.
 2020-12-07 12:48:01 +02:00
Michael Rohleder
65555198b2
gnu: emacs-with-editor: Update to 3.0.2. 
* gnu/packages/emacs-xyz.scm (emacs-with-editor): Update to 3.0.2.
[propagated-inputs]: Changed emacs-dash to emacs-async.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2020-12-07 11:40:47 +01:00
Mathieu Othacehe
e461d3b750
service: Add shepherd discover action. 
* gnu/services/base.scm (shepherd-discover-action): New procedure,
(guix-shepherd-service)[<actions>]: add it,
[<start>]: honor it.
* doc/guix.texi (Invoking guix-daemon): Document it.
 2020-12-07 10:39:21 +01:00
Christopher Baines
92f7c11af2
prometheus-node-exporter: Support extra options. 
There are plenty of options supported that the Guix configuration record
doesn't help you with, so add this field to allow users to do their own thing.

* gnu/services/monitoring.scm (<prometheus-node-exporter-configuration>): Add
extra-options field.
(prometheus-node-exporter-shepherd-service): Handle the extra options.
* doc/guix.texi (Prometheus Node Exporter Service): Document this.
 2020-12-07 09:08:33 +00:00
Christopher Baines
fd14385581
prometheus-node-exporter: Enable the textfile collector. 
* gnu/services/monitoring.scm (<prometheus-node-exporter-configuration>): Add
textfile-directory.
(prometheus-node-exporter-textfile-directory,
prometheus-node-exporter-activation): New procedures.
(prometheus-node-exporter-shepherd-service): Pass
--collector.textfile.directoryto the service.
(prometheus-node-exporter-service-type): Extend the activation service type.
* doc/guix.texi (Prometheus Node Exporter Service): Document.
 2020-12-07 09:08:20 +00:00
Christopher Baines
fa0975ad71
services: prometheus-node-exporter: Use a log file. 
This makes the logs easier to find and read.

* gnu/services/monitoring.scm (prometheus-node-exporter-shepherd-service):
Pass #:log-file to make-forkexec-constructor.
 2020-12-07 09:08:09 +00:00
Christopher Baines
6574298e4e
prometheus-node-exporter: Add user and group. 
So it doesn't run as root, and because this will help with the textfile
exporter.

* gnu/services/monitoring.scm (%prometheus-node-exporter-accounts): New
variable.
(prometheus-node-exporter-shepherd-service): Use the relevant user and group.
(prometheus-node-exporter-service-type): Extend the account service type.
 2020-12-07 09:07:54 +00:00
Christopher Baines
502cb3f8a1
services: prometheus-node-exporter: Neaten up. 
Add relevant exports, as well as a comment to better indicate where the
relevant code starts.

* gnu/services/monitoring.scm (prometheus-node-exporter-service-type):
Capitalise Prometheus.
 2020-12-07 09:07:13 +00:00
Antoine Côté
928bedcab7
gnu: rav1e: Update to 0.3.4. 
* gnu/packages/video.scm (rav1e): Update to 0.3.4.
[arguments]: In cargo-inputs replace rust-aom-sys-0.1 with 0.2,
rust-nasm-rs-0.1 with 0.2.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2020-12-07 09:27:27 +01:00
Antoine Côté
b536f3bbd9
gnu: Add rust-nasm-rs-0.2. 
* gnu/packages/crate-io.scm (rust-nasm-rs-0.2): New variable.
(rust-nasm-rs-0.1): Inherit from rust-nasm-rs-0.2.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2020-12-07 09:27:15 +01:00
Antoine Côté
cbd33c0da1
gnu: Add rust-aom-sys-0.2. 
* gnu/packages/crates-graphics.scm (rust-aom-sys-0.2): New variable.
(rust-aom-sys-0.1): Inherit from rust-aom-sys-0.2.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2020-12-07 09:27:04 +01:00
Joseph LaFreniere
f15cc2f4a2
gnu: Add emacs-counsel-jq. 
* gnu/packages/emacs-xyz.scm (emacs-counsel-jq): New variable.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
 2020-12-07 10:52:47 +03:00
Vagrant Cascadian
c8ea8516d0
gnu: diffoscope: Update to 162. 
* gnu/packages/diffoscope (diffoscope): Update to 162.
 2020-12-06 19:28:56 -08:00
Giacomo Leidi
0c86b24c41
gnu: Add hledger-web. 
* gnu/packages/finance.scm (hledger-web): New variable.

Signed-off-by: Timothy Sample <samplet@ngyro.com>
 2020-12-06 21:35:41 -05:00
Giacomo Leidi
897f47bc6a
gnu: Add ghc-wai-cors. 
* gnu/packages/haskell-web.scm (ghc-wai-cors): New variable.

Signed-off-by: Timothy Sample <samplet@ngyro.com>
 2020-12-06 21:35:35 -05:00
Giacomo Leidi
36017770f7
gnu: Add ghc-wai-handler-launch. 
* gnu/packages/haskell-web.scm (ghc-wai-handler-launch): New variable.

Signed-off-by: Timothy Sample <samplet@ngyro.com>
 2020-12-06 21:35:21 -05:00
Giacomo Leidi
90eae236aa
gnu: Add ghc-yesod-static. 
* gnu/packages/haskell-web.scm (ghc-yesod-static): New variable.

Signed-off-by: Timothy Sample <samplet@ngyro.com>
 2020-12-06 21:35:13 -05:00
Giacomo Leidi
8bbb759c83
gnu: Add ghc-hjsmin. 
* gnu/packages/haskell-web.scm (ghc-hjsmin): New variable.

Signed-off-by: Timothy Sample <samplet@ngyro.com>
 2020-12-06 21:35:05 -05:00
Giacomo Leidi
4cb7802121
gnu: Add ghc-cryptonite-conduit. 
* gnu/packages/haskell-crypto.scm (ghc-cryptonite-conduit): New variable.

Signed-off-by: Timothy Sample <samplet@ngyro.com>
 2020-12-06 21:34:57 -05:00
Giacomo Leidi
fd076aefcd
gnu: Add ghc-wai-app-static. 
* gnu/packages/haskell-web.scm (ghc-wai-app-static): New variable.

Signed-off-by: Timothy Sample <samplet@ngyro.com>
 2020-12-06 21:34:46 -05:00
Giacomo Leidi
2e77bb473b
gnu: Add ghc-yesod-test. 
* gnu/packages/haskell-web.scm (ghc-yesod-test): New variable.

Signed-off-by: Timothy Sample <samplet@ngyro.com>
 2020-12-06 21:34:37 -05:00
Giacomo Leidi
4ad5ce4f78
gnu: ghc-yesod-core: Update to 1.6.17.2. 
* gnu/packages/haskell-web.scm (ghc-yesod-core): Update to 1.6.17.2.

Signed-off-by: Timothy Sample <samplet@ngyro.com>
 2020-12-06 21:34:24 -05:00
Brett Gilio
1db54324b2
gnu: python-transient: Update to 0.12. 
* gnu/packages/virtualization.scm (python-transient): Update to 0.12.
 2020-12-06 18:08:30 -06:00
Leo Famulari
8f805657b9
gnu: Add the Glimpse Image Editor. 
* gnu/packages/gimp.scm (glimpse): New variable.
 2020-12-06 18:40:42 -05:00
Tobias Geerinckx-Rice
c7fcd248c2
gnu: zabbix-agentd: Update to 5.2.2. 
* gnu/packages/monitoring.scm (zabbix-agentd): Update to 5.2.2.
 2020-12-07 00:38:44 +01:00
Tobias Geerinckx-Rice
4a6cc1bbb9
gnu: mutt: Update to 2.0.3. 
* gnu/packages/mail.scm (mutt): Update to 2.0.3.
 2020-12-07 00:38:43 +01:00
Tobias Geerinckx-Rice
c73b1257fc
gnu: youtube-dl: Update to 2020.12.07. 
* gnu/packages/video.scm (youtube-dl): Update to 2020.12.07.
 2020-12-07 00:38:42 +01:00
Tobias Geerinckx-Rice
ac50633c15
gnu: hplip: Update to 3.20.11. 
* gnu/packages/cups.scm (hplip): Update to 3.20.11.
[source]: Remove upstreamed patch.
* gnu/packages/patches/hplip-fix-bug-1898438.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2020-12-06 23:50:44 +01:00
Tobias Geerinckx-Rice
a79e05f9e8
gnu: libopenmpt: Update to 0.5.4. 
* gnu/packages/audio.scm (libopenmpt): Update to 0.5.4.
 2020-12-06 23:50:44 +01:00
Tobias Geerinckx-Rice
c24d1f2e6f
gnu: nsd: Update to 4.3.4. 
* gnu/packages/dns.scm (nsd): Update to 4.3.4.
 2020-12-06 23:50:43 +01:00
Tobias Geerinckx-Rice
71efb620cb
gnu: ropgadget: Update to 6.4. 
* gnu/packages/cybersecurity.scm (ropgadget): Update to 6.4.
 2020-12-06 23:50:43 +01:00
Tobias Geerinckx-Rice
6a84fddcaa
gnu: pam-mount: Update to 2.17. 
* gnu/packages/admin.scm (pam-mount): Update to 2.17.
[source]: Remove upstreamed patch.
* gnu/packages/patches/pam-mount-luks2-support.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2020-12-06 23:50:43 +01:00
Tobias Geerinckx-Rice
9b5ed03969
gnu: fio: Update to 3.25. 
* gnu/packages/benchmark.scm (fio): Update to 3.25.
 2020-12-06 23:50:43 +01:00
Ryan Prior
6374a25357
gnu: esbuild: Update to 0.8.19. 
* gnu/packages/web.scm (esbuild): Update to 0.8.19.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2020-12-06 23:19:15 +01:00
Ludovic Courtès
ce3b5e5a8d
services: mpd: Make /var/run/mpd/USER user-owned. 
Fixes <https://bugs.gnu.org/44820>.
Reported by Simon <lists@netpanic.org>.

This is a followup to bb124f6e9c.

* gnu/services/audio.scm (mpd-service-activation): Chown the parent of
DIRECTORY as well.
 2020-12-06 23:18:08 +01:00
Ekaitz Zarraga
383f087cd7
gnu: freecad: Update to 0.18.5 
* gnu/packages/engineering.scm (freecad): Update to 0.18.5

Signed-off-by: Marius Bakke <marius@gnu.org>
 2020-12-06 22:28:10 +01:00
Ekaitz Zarraga
50c24bbd4f
gnu: freecad: Fix compilation flags. 
* gnu/packages/engineering.scm (freecad)[arguments]: Set correct
search paths in compilation flags.  Fixes <https://bugs.gnu.org/43448>.

Signed-off-by: Marius Bakke <marius@gnu.org>
 2020-12-06 22:28:10 +01:00
Christopher Baines
bca3220b60
gnu: guix-build-coordinator: Update to 0-10.79e28fb. 
* gnu/packages/package-management.scm (guix-build-coordinator): Update to
0-10.79e28fb.
 2020-12-06 21:09:42 +00:00
Christopher Baines
eb0b29f13d
gnu: guix-build-coordinator: Support cross-compilation. 
Due to fibers not supporting the Hurd yet, the coordinator itself won't work,
but the agent should.

* gnu/packages/package-management.scm (guix-build-coordinator)[inputs]: Don't
include sqitch if building for the hurd.
[propagated-inputs]: Don't include guile-fibers if building for the hurd.
 2020-12-06 21:09:42 +00:00
Christopher Baines
7306c67912
gnu: guile-lib: Support cross-compilation. 
* gnu/packages/guile-xyz.scm (guile-lib)[native-inputs]: Add guile-3.0.
(guile2.0-lib, guile2.2-lib)[native-inputs]: Explicitly specifiy pkg-config.
 2020-12-06 21:09:41 +00:00
Marius Bakke
329fa5bdbb
Revert "linux-container: Correct test for unprivileged user namespace support." 
This broke 'guix environment --container' on non-Debian distributions.
Fixes <https://bugs.gnu.org/45066>.  Reported by luhux <luhux@outlook.com>.

This reverts commit 8bc5ca5160.
 2020-12-06 21:55:18 +01:00
Marius Bakke
3f35b09e8d
gnu: Add foot. 
* gnu/packages/terminals.scm (foot): New public variable.
 2020-12-06 18:30:12 +01:00
Marius Bakke
25e08f32c1
gnu: Add fcft. 
* gnu/packages/fontutils.scm (fcft): New public variable.
 2020-12-06 18:30:12 +01:00
Marius Bakke
0d59aecf63
gnu: Add tllist. 
* gnu/packages/datastructures.scm (tllist): New public variable.
 2020-12-06 18:30:12 +01:00
Marius Bakke
0c68fff5af
gnu: Sort module imports in (gnu packages fontutils). 
* gnu/packages/fontutils.scm: Sort (gnu ...) module imports.
 2020-12-06 18:30:12 +01:00
Tobias Geerinckx-Rice
10defc57bf
linux-initrd: Add bcachefs support. 
* gnu/system/linux-initrd.scm (file-system-packages): Add
bcachefs-tools/static.
(file-system-type-modules): Add an entry for the "bcachefs" type and
module.
 2020-12-06 16:11:43 +01:00
Tobias Geerinckx-Rice
23be018d4f
file-systems: Fix ‘bcachefs fsck’ exit value logic. 
Bit 1 means the target device was mounted read-only whilst checking.
This should never happen in an initrd context but is not an error.

* gnu/build/file-systems.scm (check-bcachefs-file-system): Ignore status
bits that don't signal an error.  Remove the 'reboot-required case.
 2020-12-06 16:11:43 +01:00
Nicolas Goaziou
e8528f03f9
gnu: emacs-hyperbole: Condensate description. 
* gnu/packages/emacs-xyz.scm (emacs-hyperbole)[description]: Remove buzzwords.
Condensate information.
 2020-12-06 15:42:45 +01:00
Michael Rohleder
dc60e1c71e
gnu: emacs-info-plus: Update to 0-3.29811ed. 
* gnu/packages/emacs-xyz.scm (emacs-info-plus): Update to 0-3.29811ed.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2020-12-06 15:34:46 +01:00
Nicolas Goaziou
ee00b7c3ec
gnu: bat: Fix build. 
* gnu/packages/rust-apps.scm (bat)[native-inputs]: Add pkg-config.
[inputs]: Add libgit2.

This is a followup to 063f6dfc37.
 2020-12-06 13:54:59 +01:00