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45223 commits

Author SHA1 Message Date
Ricardo Wurmus
7ccbaf1b6e
gnu: r-reportingtools: Update to 2.26.0.
* gnu/packages/bioconductor.scm (r-reportingtools): Update to 2.26.0.
2019-12-15 15:38:53 +01:00
Ricardo Wurmus
2e73ea955b
gnu: r-regioner: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.18.0.
2019-12-15 15:38:53 +01:00
Ricardo Wurmus
ddd3673928
gnu: r-hpar: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-hpar): Update to 1.28.0.
2019-12-15 15:38:53 +01:00
Ricardo Wurmus
7a111924ee
gnu: r-annotate: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-annotate): Update to 1.64.0.
2019-12-15 15:38:52 +01:00
Ricardo Wurmus
ce5162d09d
gnu: r-affxparser: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-affxparser): Update to 1.58.0.
2019-12-15 15:38:52 +01:00
Ricardo Wurmus
1693534f76
gnu: r-affycoretools: Update to 1.58.2.
* gnu/packages/bioconductor.scm (r-affycoretools): Update to 1.58.2.
2019-12-15 15:38:52 +01:00
Ricardo Wurmus
f561421d04
gnu: r-affycontam: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-affycontam): Update to 1.44.0.
2019-12-15 15:38:52 +01:00
Ricardo Wurmus
c2fa63e905
gnu: r-affycompatible: Update to 1.46.0.
* gnu/packages/bioconductor.scm (r-affycompatible): Update to 1.46.0.
2019-12-15 15:38:52 +01:00
Ricardo Wurmus
5d87f12615
gnu: r-affycomp: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-affycomp): Update to 1.62.0.
2019-12-15 15:38:52 +01:00
Ricardo Wurmus
be5e4e9615
gnu: r-biocgenerics: Update to 0.32.0.
* gnu/packages/bioconductor.scm (r-biocgenerics): Update to 0.32.0.
2019-12-15 15:38:52 +01:00
Ricardo Wurmus
2c8433ca0a
gnu: r-depecher: Update to 1.2.0.
* gnu/packages/bioconductor.scm (r-depecher): Update to 1.2.0.
[arguments]: Remove field.
[propagated-inputs]: Remove r-biocparallel; add r-fnn and r-robustbase.
2019-12-15 15:38:52 +01:00
Ricardo Wurmus
7a62d5e0c2
gnu: Add r-cytoml.
* gnu/packages/bioconductor.scm (r-cytoml): New variable.
2019-12-15 15:38:52 +01:00
Ricardo Wurmus
6aedc80514
gnu: Add r-opencyto.
* gnu/packages/bioconductor.scm (r-opencyto): New variable.
2019-12-15 15:38:52 +01:00
Ricardo Wurmus
b700b9ec21
gnu: Add r-flowstats.
* gnu/packages/bioconductor.scm (r-flowstats): New variable.
2019-12-15 15:38:52 +01:00
Ricardo Wurmus
82c1111745
gnu: Add r-flowworkspace.
* gnu/packages/bioconductor.scm (r-flowworkspace): New variable.
2019-12-15 15:38:52 +01:00
Ricardo Wurmus
f1964519e7
gnu: Add r-rprotobuflib.
* gnu/packages/bioconductor.scm (r-rprotobuflib): New variable.
2019-12-15 15:38:52 +01:00
Ricardo Wurmus
c8ab9eb1b4
gnu: Add r-flowclust.
* gnu/packages/bioconductor.scm (r-flowclust): New variable.
2019-12-15 15:38:52 +01:00
Ricardo Wurmus
0dd4b7d732
gnu: Add r-flowviz.
* gnu/packages/bioconductor.scm (r-flowviz): New variable.
2019-12-15 15:38:52 +01:00
Ricardo Wurmus
dbfce8ff5b
gnu: r-rgraphviz: Update to 2.30.0.
* gnu/packages/graph.scm (r-rgraphviz): Update to 2.30.0.
2019-12-15 15:38:52 +01:00
Ricardo Wurmus
9d1099eb07
gnu: r-preprocesscore: Update to 1.48.0.
* gnu/packages/statistics.scm (r-preprocesscore): Update to 1.48.0.
2019-12-15 15:38:52 +01:00
Ricardo Wurmus
257b3b812c
gnu: Add r-knn-covertree.
* gnu/packages/cran.scm (r-knn-covertree): New variable.
2019-12-15 15:38:51 +01:00
Ricardo Wurmus
5aa7e882fa
gnu: Add r-ggplot-multistats.
* gnu/packages/cran.scm (r-ggplot-multistats): New variable.
2019-12-15 15:38:51 +01:00
Ricardo Wurmus
f5f440312d
gnu: Add r-ggcyto.
* gnu/packages/bioconductor.scm (r-ggcyto): New variable.
2019-12-15 15:38:51 +01:00
Ricardo Wurmus
15ac0c195c
gnu: Add r-ncdfflow.
* gnu/packages/bioconductor.scm (r-ncdfflow): New variable.
2019-12-15 15:38:51 +01:00
Ricardo Wurmus
b4aee31dcb
gnu: Add r-cytolib.
* gnu/packages/bioconductor.scm (r-cytolib): New variable.
2019-12-15 15:38:51 +01:00
Ricardo Wurmus
b4a22ccaaa
gnu: Add r-multidataset.
* gnu/packages/bioconductor.scm (r-multidataset): New variable.
2019-12-15 15:38:51 +01:00
Ricardo Wurmus
e5d722fb4c
gnu: Add r-biocversion.
* gnu/packages/bioconductor.scm (r-biocversion): New variable.
2019-12-15 15:38:51 +01:00
Ricardo Wurmus
eb15df8dea
gnu: Add r-qqman.
* gnu/packages/cran.scm (r-qqman): New variable.
2019-12-15 15:38:51 +01:00
Ricardo Wurmus
b5b6e74e15
gnu: Add r-idpmisc.
* gnu/packages/cran.scm (r-idpmisc): New variable.
2019-12-15 15:38:51 +01:00
Björn Höfling
58c3a4f596
gnu: java-svg-salamander: Return #t from snippet.
* gnu/packages/java.scm (java-svg-salamander)[origin]:
Return #t from snippet.
2019-12-15 12:31:35 +01:00
Brett Gilio
4fb8e2744a
gnu: emacs-cider: Update home-page.
* gnu/packages/emacs-xyz.scm (emacs-cider)[home-page]: Change to https://cider.mx/.
2019-12-14 18:46:06 -06:00
Brett Gilio
7d4d881266
gnu: emacs-cider: Update to 0.23.0.
* gnu/packages/emacs-xyz.scm (emacs-cider): Update to 0.23.0.
[propagated-inputs]: Add emacs-seq, emacs-parseedn.
2019-12-14 18:45:22 -06:00
Brett Gilio
47a9a59270
gnu: Add emacs-parseedn.
* gnu/packages/emacs-xyz.scm (emacs-parseedn): New variable.
2019-12-14 18:44:50 -06:00
Brett Gilio
586e1611b9
gnu: Add emacs-parseclj.
* gnu/packages/emacs-xyz.scm (emacs-parseclj): New variable.
2019-12-14 18:44:25 -06:00
Konrad Hinsen
4ac5d4fee1
gnu: Add gfortran-toolchain
* gnu/packages/commencement.scm: (gfortran-toolchain): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-12-15 00:34:05 +01:00
Ludovic Courtès
178e550034
gnu: bootloaders: Avoid #:select on (gnu packages …) module.
* gnu/packages/bootloaders.scm: Remove use of #:select.
2019-12-15 00:34:05 +01:00
Brett Gilio
9d97a11f04
gnu: emacs-telega: Update to 0.5.3-1.
* gnu/packages/emacs-xyz.scm (emacs-telega): Update to 0.5.3-1.
[version]: Correct the version number used in the package elisp code itself.
2019-12-14 14:07:22 -06:00
Alex Griffin
d900e1f675
gnu: Add htmlcxx.
* gnu/packages/web.scm (htmlcxx): New variable.
2019-12-14 13:22:54 -06:00
Brett Gilio
e9d8dee6c3
gnu: emacs-doom-themes: Update to 2.1.6-2.
* gnu/packages/emacs-xyz.scm (emacs-doom-themes): Update to 2.1.6-2.
[arguments]: Disable byte-compilation regarding issue in upstream.
<https://github.com/hlissner/emacs-doom-themes/issues/314>.
2019-12-14 13:06:07 -06:00
Julien Lepiller
5c1bd7b8d1
gnu: josm: Update to 15553.
* gnu/packages/geo.scm (josm): Update to 15553.
2019-12-14 17:43:17 +01:00
Mathieu Othacehe
94de8d0a7f
gnu: Add u-boot-pine64-lts-bootloader.
* gnu/bootloader/u-boot.scm (u-boot-pine64-lts-bootloader): New variable.
2019-12-14 17:41:10 +01:00
Mathieu Othacehe
db78fc0679
gnu: bootloaders: Fix make-u-boot-sunxi64-package cross-compilation.
* gnu/packages/bootloaders.scm (make-u-boot-sunxi64-package)[arguments]:
Search in native-inputs to fix cross-compilation.
2019-12-14 17:41:10 +01:00
Mathieu Othacehe
af58b275c9
gnu: Add u-boot-pine64-lts.
* gnu/packages/bootloaders.scm (u-boot-pine64-lts): New variable.
2019-12-14 17:41:09 +01:00
Ricardo Wurmus
5c0b5b8ad7
gnu: Add r-adamethods.
* gnu/packages/cran.scm (r-adamethods): New variable.
2019-12-14 13:35:58 +01:00
Ricardo Wurmus
c67508079d
gnu: Add r-anthropometry.
* gnu/packages/cran.scm (r-anthropometry): New variable.
2019-12-14 13:35:58 +01:00
Ricardo Wurmus
c71724653a
gnu: Add r-shapes.
* gnu/packages/cran.scm (r-shapes): New variable.
2019-12-14 13:35:58 +01:00
Ricardo Wurmus
ccc2c19b02
gnu: Add r-archetypes.
* gnu/packages/cran.scm (r-archetypes): New variable.
2019-12-14 13:35:58 +01:00
Ricardo Wurmus
9fd2d4fdb1
gnu: Add r-depth.
* gnu/packages/cran.scm (r-depth): New variable.
2019-12-14 13:35:58 +01:00
Ricardo Wurmus
9cd3ae8620
gnu: Add r-icge.
* gnu/packages/cran.scm (r-icge): New variable.
2019-12-14 13:35:57 +01:00
Ricardo Wurmus
86a760cc67
gnu: Add r-biclust.
* gnu/packages/cran.scm (r-biclust): New variable.
2019-12-14 13:35:57 +01:00
Ricardo Wurmus
9906cb80de
gnu: Add r-flexclust.
* gnu/packages/cran.scm (r-flexclust): New variable.
2019-12-14 13:35:57 +01:00
Ricardo Wurmus
94ecf71344
gnu: Add r-additivitytests.
* gnu/packages/cran.scm (r-additivitytests): New variable.
2019-12-14 13:35:57 +01:00
Ricardo Wurmus
5458490ebb
gnu: Add r-tolerance.
* gnu/packages/cran.scm (r-tolerance): New variable.
2019-12-14 13:35:57 +01:00
Ricardo Wurmus
09e9ad334a
gnu: Add r-univoutl.
* gnu/packages/cran.scm (r-univoutl): New variable.
2019-12-14 13:35:57 +01:00
Ricardo Wurmus
0b13a75716
gnu: Add r-adagio.
* gnu/packages/cran.scm (r-adagio): New variable.
2019-12-14 13:35:57 +01:00
Ricardo Wurmus
2a1fd51864
gnu: Add r-adabag.
* gnu/packages/cran.scm (r-adabag): New variable.
2019-12-14 13:35:57 +01:00
Ricardo Wurmus
154555e42f
gnu: Add r-acuityview.
* gnu/packages/cran.scm (r-acuityview): New variable.
2019-12-14 13:35:57 +01:00
Ricardo Wurmus
5e2ad37684
gnu: Add r-imager.
* gnu/packages/cran.scm (r-imager): New variable.
2019-12-14 13:35:57 +01:00
Ricardo Wurmus
7dd1fbf9ee
gnu: Add r-readbitmap.
* gnu/packages/cran.scm (r-readbitmap): New variable.
2019-12-14 13:35:57 +01:00
Ricardo Wurmus
6968aa2fe7
gnu: Add r-bmp.
* gnu/packages/cran.scm (r-bmp): New variable.
2019-12-14 13:35:56 +01:00
Ricardo Wurmus
7faa05377e
gnu: Add r-actuar.
* gnu/packages/cran.scm (r-actuar): New variable.
2019-12-14 13:35:56 +01:00
Ricardo Wurmus
1830e0383b
gnu: Add r-expint.
* gnu/packages/cran.scm (r-expint): New variable.
2019-12-14 13:35:56 +01:00
Ricardo Wurmus
5f08fa64f0
gnu: Add r-actogrammr.
* gnu/packages/cran.scm (r-actogrammr): New variable.
2019-12-14 13:35:56 +01:00
Ricardo Wurmus
a5d4dc7efb
gnu: Add r-activpalprocessing.
* gnu/packages/cran.scm (r-activpalprocessing): New variable.
2019-12-14 13:35:56 +01:00
Ricardo Wurmus
bbaab25396
gnu: Add r-activpal.
* gnu/packages/cran.scm (r-activpal): New variable.
2019-12-14 13:35:56 +01:00
Ricardo Wurmus
6f94a3e5f5
gnu: Add r-activityindex.
* gnu/packages/cran.scm (r-activityindex): New variable.
2019-12-14 13:35:56 +01:00
Ricardo Wurmus
89d4f154b9
gnu: Add r-activitycounts.
* gnu/packages/cran.scm (r-activitycounts): New variable.
2019-12-14 13:35:56 +01:00
Ricardo Wurmus
7f960d81fb
gnu: Add r-activedriver.
* gnu/packages/cran.scm (r-activedriver): New variable.
2019-12-14 13:35:56 +01:00
Ricardo Wurmus
402dae07b5
gnu: Add r-actigraphy.
* gnu/packages/cran.scm (r-actigraphy): New variable.
2019-12-14 13:35:56 +01:00
Ricardo Wurmus
77a5bf938f
gnu: Add r-fda.
* gnu/packages/cran.scm (r-fda): New variable.
2019-12-14 13:35:56 +01:00
Ricardo Wurmus
c090b9977c
gnu: Add r-actfrag.
* gnu/packages/cran.scm (r-actfrag): New variable.
2019-12-14 13:35:56 +01:00
Ricardo Wurmus
6790adf338
gnu: Add r-ineq.
* gnu/packages/cran.scm (r-ineq): New variable.
2019-12-14 13:35:55 +01:00
Ricardo Wurmus
d024207e7b
gnu: Add r-actcd.
* gnu/packages/cran.scm (r-actcd): New variable.
2019-12-14 13:35:55 +01:00
Ricardo Wurmus
70c0dbe73f
gnu: Add r-gdina.
* gnu/packages/cran.scm (r-gdina): New variable.
2019-12-14 13:35:55 +01:00
Ricardo Wurmus
6f0a5ab098
gnu: Add r-alabama.
* gnu/packages/cran.scm (r-alabama): New variable.
2019-12-14 13:35:55 +01:00
Ricardo Wurmus
ffecbcbf51
gnu: Add r-acswr.
* gnu/packages/cran.scm (r-acswr): New variable.
2019-12-14 13:35:55 +01:00
Ricardo Wurmus
0ea0b2dd46
gnu: Add r-acss.
* gnu/packages/cran.scm (r-acss): New variable.
2019-12-14 13:35:55 +01:00
Ricardo Wurmus
07d958fe0e
gnu: Add r-acss-data.
* gnu/packages/cran.scm (r-acss-data): New variable.
2019-12-14 13:35:55 +01:00
Ricardo Wurmus
49e9a9aea2
gnu: Add r-acs.
* gnu/packages/cran.scm (r-acs): New variable.
2019-12-14 13:35:55 +01:00
Ricardo Wurmus
d015db6f57
gnu: Add r-acrt.
* gnu/packages/cran.scm (r-acrt): New variable.
2019-12-14 13:35:55 +01:00
Ricardo Wurmus
4b44bfb6ec
gnu: Add r-acrosstic.
* gnu/packages/cran.scm (r-acrosstic): New variable.
2019-12-14 13:35:55 +01:00
Ricardo Wurmus
c3f5989c8f
gnu: Add r-treeclust.
* gnu/packages/cran.scm (r-treeclust): New variable.
2019-12-14 13:35:55 +01:00
Ricardo Wurmus
3bc2c21043
gnu: Add r-acrm.
* gnu/packages/cran.scm (r-acrm): New variable.
2019-12-14 13:35:55 +01:00
Ricardo Wurmus
6c2dcba99d
gnu: Add r-dummies.
* gnu/packages/cran.scm (r-dummies): New variable.
2019-12-14 13:35:54 +01:00
Ricardo Wurmus
6afc037e74
gnu: Add r-kernelfactory.
* gnu/packages/cran.scm (r-kernelfactory): New variable.
2019-12-14 13:35:54 +01:00
Ricardo Wurmus
270529f633
gnu: Add r-genalg.
* gnu/packages/cran.scm (r-genalg): New variable.
2019-12-14 13:35:54 +01:00
Ricardo Wurmus
f18c0544f6
gnu: Add r-ada.
* gnu/packages/cran.scm (r-ada): New variable.
2019-12-14 13:35:54 +01:00
Ricardo Wurmus
56cba940c3
gnu: Add r-acp.
* gnu/packages/cran.scm (r-acp): New variable.
2019-12-14 13:35:54 +01:00
Ricardo Wurmus
c12227d971
gnu: Add r-acousticndlcoder.
* gnu/packages/cran.scm (r-acousticndlcoder): New variable.
2019-12-14 13:35:54 +01:00
Ricardo Wurmus
19172e12ef
gnu: Add r-seewave.
* gnu/packages/cran.scm (r-seewave): New variable.
2019-12-14 13:35:54 +01:00
Ricardo Wurmus
cb350053da
gnu: Add r-tuner.
* gnu/packages/cran.scm (r-tuner): New variable.
2019-12-14 13:35:54 +01:00
Ricardo Wurmus
5d887a0355
gnu: Add r-acopula.
* gnu/packages/cran.scm (r-acopula): New variable.
2019-12-14 13:35:54 +01:00
Ricardo Wurmus
eff3e8a471
gnu: Add r-acnr.
* gnu/packages/cran.scm (r-acnr): New variable.
2019-12-14 13:35:54 +01:00
Ricardo Wurmus
217cd2e3ee
gnu: Add r-r-devices.
* gnu/packages/cran.scm (r-r-devices): New variable.
2019-12-14 13:35:53 +01:00
Ricardo Wurmus
2fe1e66c4d
gnu: Add r-r-filesets.
* gnu/packages/cran.scm (r-r-filesets): New variable.
2019-12-14 13:35:53 +01:00
Ricardo Wurmus
8e6f63dd83
gnu: Add r-activepathways.
* gnu/packages/bioconductor.scm (r-activepathways): New variable.
2019-12-14 13:35:53 +01:00
Mark H Weaver
3e9e242aa5
gnu: linux-libre: Update to 5.3.16.
* gnu/packages/linux.scm (linux-libre-5.3-version): Update to 5.3.16.
(linux-libre-5.3-pristine-source): Update hash.
2019-12-13 23:09:39 -05:00
Mark H Weaver
4e410c9d23
gnu: linux-libre@4.19: Update to 4.19.89.
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.89.
(linux-libre-4.19-pristine-source): Update hash.
2019-12-13 23:08:25 -05:00
Ricardo Wurmus
9f9520a129
gnu: bluez-alsa: Update to 2.0.0.
* gnu/packages/audio.scm (bluez-alsa): Update to 2.0.0.
[source]: Use git-file-name.
[arguments]: Override ALSA plugin directory and dbus configuration directory.
[inputs]: Add dbus.
2019-12-13 22:53:19 +01:00
Ricardo Wurmus
1c2e3d7d31
gnu: Add r-r-huge.
* gnu/packages/cran.scm (r-r-huge): New variable.
2019-12-13 22:41:41 +01:00