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Author SHA1 Message Date
Ricardo Wurmus
7ff93d3483
gnu: r-ffbase: Update to 0.13.3. 
* gnu/packages/cran.scm (r-ffbase): Update to 0.13.3.
 2021-03-09 22:05:25 +01:00
Ricardo Wurmus
84e39b3d99
gnu: r-pkgload: Update to 1.2.0. 
* gnu/packages/cran.scm (r-pkgload): Update to 1.2.0.
 2021-03-09 22:05:25 +01:00
Ricardo Wurmus
601a112bb2
gnu: r-ps: Update to 1.6.0. 
* gnu/packages/cran.scm (r-ps): Update to 1.6.0.
 2021-03-09 22:05:25 +01:00
Ricardo Wurmus
f0f2e2cbda
gnu: r-partykit: Update to 1.2-13. 
* gnu/packages/cran.scm (r-partykit): Update to 1.2-13.
 2021-03-09 22:05:25 +01:00
Ricardo Wurmus
fa00e35b9e
gnu: r-rticles: Update to 0.19. 
* gnu/packages/cran.scm (r-rticles): Update to 0.19.
 2021-03-09 22:05:25 +01:00
Ricardo Wurmus
260259f5ef
gnu: r-waldo: Update to 0.2.5. 
* gnu/packages/cran.scm (r-waldo): Update to 0.2.5.
 2021-03-09 22:05:25 +01:00
Ricardo Wurmus
4be2e0f309
gnu: r-cachem: Update to 1.0.4. 
* gnu/packages/cran.scm (r-cachem): Update to 1.0.4.
 2021-03-09 22:05:24 +01:00
Ricardo Wurmus
ef8e4f4172
gnu: r-wgcna: Update to 1.70-3. 
* gnu/packages/bioconductor.scm (r-wgcna): Update to 1.70-3.
 2021-03-09 22:05:24 +01:00
Ricardo Wurmus
7fffee5e34
gnu: Add r-terra. 
* gnu/packages/cran.scm (r-terra): New variable.
 2021-03-09 22:05:24 +01:00
Ricardo Wurmus
1bbf632574
gnu: Add r-ggtext. 
* gnu/packages/cran.scm (r-ggtext): New variable.
 2021-03-09 22:05:24 +01:00
Ricardo Wurmus
c341a4d02e
gnu: Add r-gridtext. 
* gnu/packages/cran.scm (r-gridtext): New variable.
 2021-03-09 22:05:24 +01:00
Ricardo Wurmus
91aa72bfe2
gnu: Add r-palmerpenguins. 
* gnu/packages/cran.scm (r-palmerpenguins): New variable.
 2021-03-09 22:05:24 +01:00
Ricardo Wurmus
bcdf0cf3a5
gnu: Add r-rstpm2. 
* gnu/packages/cran.scm (r-rstpm2): New variable.
 2021-03-09 22:05:24 +01:00
Ricardo Wurmus
3c04e179b7
gnu: Add r-fastghquad. 
* gnu/packages/cran.scm (r-fastghquad): New variable.
 2021-03-09 22:05:24 +01:00
Efraim Flashner
80c83756e9
gnu: evisum: Update to 0.5.11. 
* gnu/packages/enlightenment.scm (evisum): Update to 0.5.11.
 2021-03-09 22:59:20 +02:00
Felix Gruber
251b0f7a6f
gnu: vtk: Fix build failure. 
* gnu/packages/image-processing.scm (vtk): Fix build failure.
[source]: Add patch to fix build failure with recent versions of freetype.
* gnu/packages/patches/vtk-fix-freetypetools-build-failure.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2021-03-09 22:32:41 +02:00
Efraim Flashner
5b74e21e12
gnu: ruby-pstree: Update to 0.3.0. 
* gnu/packages/ruby.scm (ruby-pstree): Update to 0.3.0.
 2021-03-09 22:27:39 +02:00
Christopher Baines
f5ffb3bd9c
weather: Call lookup-narinfos with a custom progress reporter. 
This means there's a useful progress bar when running guix weather.

* guix/scripts/weather.scm (report-server-coverage): Pass
 #:make-progress-reporter to lookup-narinfos.
 2021-03-09 20:19:36 +00:00
Christopher Baines
fd5b77503e
guix: substitutes: Make progress reporting configurable. 
Rather than always outputting to (current-error-port) in
lookup-narinfos (which is called from within lookup-narinfos/diverse), take a
procedure which should return a progress reporter, and defer any output to
that.

As this is now general purpose code, make the default behaviour to output
nothing. Maintain the current behaviour of the substitute script by moving the
progress reporter implementation there, and passing it in when calling
lookup-narinfos/diverse.

These changes should be generally useful, but I'm particularly looking at
getting guix weather to do progress reporting differently, with this new
flexibility.

* guix/substitutes.scm (fetch-narinfos): Take a procedure to make a
progress-reporter, and use that rather than the hardcoded behaviour.
(lookup-narinfos): Add #:make-progress-reporter keyword argument, and pass
this through to fetch-narinfos.
(lookup-narinfos/diverse): Add a #:make-progress-reporter keyword argument,
and pass this through to lookup-narinfos.
* guix/scripts/substitute.scm (process-query): Pass a progress-reporter to
lookup-narinfos/diverse.
 2021-03-09 20:19:33 +00:00
Nicolas Goaziou
d019bce1a3
gnu: emacs-php-mode: Update to 1.24.0. 
* gnu/packages/emacs-xyz.scm (emacs-php-mode): Update to 1.24.0.
[arguments]: Include "lisp/" directory, and add it to load path before byte-compiling.
 2021-03-09 21:08:36 +01:00
Raghav Gururajan
eb4ed63fc4
gnu: Rename "t" to "t-todo-manager". 
* gnu/packages/task-management.scm (t): Rename to t-todo-manager.

Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
 2021-03-09 18:45:51 +01:00
Ludovic Courtès
b1cabedd28
gnu: xvfb-run: Fix syntax error. 
Error introduced in 07f77812c4.

* gnu/packages/xorg.scm (xvfb-run)[license]: Fix syntax.
 2021-03-09 16:17:56 +01:00
Ludovic Courtès
973c6f18eb
gnu: guile-next: Reintroduce as a 3.0.x snapshot. 
* gnu/packages/guile.scm (guile-next): Rewrite as a 3.0.x snapshot.
 2021-03-09 16:16:05 +01:00
Tobias Geerinckx-Rice
07f77812c4
gnu: xvfb-run: Add man page licence. 
* gnu/packages/xorg.scm (xvfb-run)[license]: Add gpl2+.
 2021-03-09 15:29:08 +01:00
Tobias Geerinckx-Rice
35d9d5bfa6
gnu: s-tui: Update to 1.1.1. 
* gnu/packages/admin.scm (s-tui): Update to 1.1.1.
 2021-03-09 15:24:51 +01:00
Tobias Geerinckx-Rice
77077d90cd
gnu: inxi-minimal: Update to 3.3.01-1. 
* gnu/packages/admin.scm (inxi-minimal): Update to 3.3.01-1.
 2021-03-09 15:24:51 +01:00
Tobias Geerinckx-Rice
1e4b80ad65
gnu: sigrok-cli: Update to 0.7.2. 
* gnu/packages/electronics.scm (sigrok-cli): Update to 0.7.2.
 2021-03-09 15:24:51 +01:00
Tobias Geerinckx-Rice
2e6d40b373
gnu: lrzip: Update to 0.641. 
* gnu/packages/compression.scm (lrzip): Update to 0.641.
 2021-03-09 15:24:50 +01:00
Tobias Geerinckx-Rice
4685a468f8
gnu: libime: Update to 1.0.4. 
* gnu/packages/fcitx5.scm (libime): Update to 1.0.4.
 2021-03-09 15:24:50 +01:00
Tobias Geerinckx-Rice
362d478746
gnu: libfastjson: Update to 0.99.9. 
* gnu/packages/c.scm (libfastjson): Update to 0.99.9.
 2021-03-09 15:24:50 +01:00
Tobias Geerinckx-Rice
5a948f3142
gnu: progress: Update to 0.16. 
* gnu/packages/admin.scm (progress): Update to 0.16.
 2021-03-09 15:24:50 +01:00
Tobias Geerinckx-Rice
9f87758fd5
gnu: Add xvfb-run. 
* gnu/packages/xorg.scm (xvfb-run): New public variable.
 2021-03-09 15:24:49 +01:00
Tobias Geerinckx-Rice
4c6fa85136
gnu: ppsspp: Update to 1.11.3. 
* gnu/packages/emulators.scm (ppsspp): Update to 1.11.3.
 2021-03-09 15:24:49 +01:00
Tobias Geerinckx-Rice
17db882d29
gnu: solaar: Fix home page. 
* gnu/packages/admin.scm (solaar)[home-page]: Correct.
 2021-03-09 15:24:49 +01:00
Tobias Geerinckx-Rice
de1f866465
gnu: solaar: Update to 1.0.5. 
* gnu/packages/admin.scm (solaar): Update to 1.0.5.
 2021-03-09 15:24:49 +01:00
Efraim Flashner
d90165826c
gnu: solfege: Build with older texinfo. 
The package failed to build with texinfo-6.7.

* gnu/packages/music.scm (solfege)[native-inputs]: Replace texinfo with
texinfo-5.
 2021-03-09 16:13:18 +02:00
Efraim Flashner
c3fb753045
gnu: python-logwrap: Update to 8.2.0.post0. 
* gnu/packages/python-xyz.scm (python-logwrap): Update to 8.2.0.post0.
[arguments]: Disable tests. Replace 'check phase.
[propagated-inputs]: Remove python-six, python-typing.
[native-inputs]: Remove unzip, python-pytest-cov, python-pytest-runner.
Add python-setuptools-scm, python-toml, python-wheel.
[home-page]: Update to new upstream URI.
 2021-03-09 16:04:50 +02:00
Efraim Flashner
12640deb50
gnu: symengine: Fix build. 
* gnu/packages/algebra.scm (symengine)[native-inputs]: Remove llvm.
[arguments]: Adjust accordingly.
 2021-03-09 15:44:31 +02:00
Efraim Flashner
40b3e9da49
gnu: xygrib: Fix compiling with newer qt. 
* gnu/packages/geo.scm (xygrib)[source]: Adjust snippet to add missing
include header.
 2021-03-09 15:32:05 +02:00
Ricardo Wurmus
133a918923
gnu: trim-galore: Update to 0.6.6. 
* gnu/packages/bioinformatics.scm (trim-galore): Update to 0.6.6.
 2021-03-09 11:54:59 +01:00
Ricardo Wurmus
49d85b3f11
gnu: bbmap: Update to 38.90. 
* gnu/packages/bioinformatics.scm (bbmap): Update to 38.90.
 2021-03-09 11:54:59 +01:00
Christopher Baines
a728889951
gnu: rust-1.26: Remove aarch64-linux from the supported systems. 
Because this package is a transitive input to many rust packages, Cuirass is
spending lots of time failing to build it on ci.guix.gnu.org. This change will
hopefully help with that issue.

* gnu/packages/rust.scm (rust-1.26)[supported-systems]: Remove aarch64-linux.
 2021-03-09 09:04:57 +00:00
Leo Famulari
d099c9c09b
gnu: VLC: Ensure AV1 files are played with dav1d by default. 
* gnu/packages/video.scm (vlc)[inputs]: Add dav1d.
 2021-03-09 03:42:18 -05:00
Leo Famulari
a7da527d59
gnu: Remove FFmpeg 4.2. 
* gnu/packages/video.scm (ffmpeg-4.2): Remove variable.
 2021-03-09 03:42:18 -05:00
Leo Famulari
0cac5f75ed
gnu: svt-vp9: Fix typo. 
* gnu/packages/video.scm (svt-vp9): Fix typo in comment.
 2021-03-09 03:42:18 -05:00
Leo Famulari
31dcf19ea3
gnu: libavif: Update to 0.9.0. 
* gnu/packages/image.scm (libavif): Update to 0.9.0.
 2021-03-09 03:42:18 -05:00
Leo Famulari
84c7099688
gnu: dav1d: Update to 0.8.2. 
* gnu/packages/video.scm (dav1d): Update to 0.8.2.
 2021-03-09 03:42:18 -05:00
Leo Famulari
0d9b7fd0c1
gnu: libaom: Update to 2.0.2. 
* gnu/packages/video.scm (libaom): Update to 2.0.2.
 2021-03-09 03:42:18 -05:00
Brice Waegeneire
236a882942
scripts: system: Activate system when switching generations. 
Fixes <https://bugs.gnu.org/38884>.

* guix/scripts/system.scm (switch-to-system-generation): Load the
activate script for that generation.

squash! scripts: system: Activate system when switching generations.
 2021-03-09 06:56:17 +01:00
Brice Waegeneire
df138dc208
gnu: services: Add activate script to the profile system directory. 
* gnu/services.scm (activation-profile-entry): New procedure...
(activation-service-type): ... use it.
 2021-03-09 06:56:12 +01:00