Commit graph

41 commits

Author SHA1 Message Date
Ricardo Wurmus
f6e9976393
gnu: Add r-dnabarcodes.
* gnu/packages/bioconductor.scm (r-dnabarcodes): New variable.
2018-10-08 14:19:04 +02:00
Ricardo Wurmus
35c076e619
gnu: r-chippeakanno: Update to 3.14.2.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.14.2.
2018-09-09 22:26:02 +02:00
Ricardo Wurmus
a207bca2ad
gnu: r-codedepends: Move from cran to bioconductor.
* gnu/packages/cran.scm (r-codedepends): Move from here...
* gnu/packages/bioconductor.scm (r-codedepends): ...to here.
2018-09-05 20:03:08 +02:00
Ricardo Wurmus
5dfe491290
gnu: r-graph: Move from bioinformatics to bioconductor.
* gnu/packages/bioinformatics.scm (r-graph): Move from here...
* gnu/packages/bioconductor.scm (r-graph): ...to here.
2018-09-05 20:03:08 +02:00
Ricardo Wurmus
65050163e0
gnu: r-chippeakanno: Update to 3.14.1.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.14.1.
2018-09-05 20:03:03 +02:00
Ricardo Wurmus
b64ce4b725
gnu: Add r-inspect.
* gnu/packages/bioconductor.scm (r-inspect): New variable.
2018-08-16 17:04:13 +02:00
Ricardo Wurmus
aa388dc7b9
gnu: Add r-rots.
* gnu/packages/bioconductor.scm (r-rots): New variable.
2018-07-05 15:08:44 +02:00
Ricardo Wurmus
f4235c0eca
gnu: Add r-glimma.
* gnu/packages/bioconductor.scm (r-glimma): New variable.
2018-07-05 15:08:44 +02:00
Ricardo Wurmus
5da0e14285
gnu: Add r-goseq.
* gnu/packages/bioconductor.scm (r-goseq): New variable.
2018-07-05 15:08:44 +02:00
Ricardo Wurmus
27c51606ae
gnu: Add r-ctc.
* gnu/packages/bioconductor.scm (r-ctc): New variable.
2018-07-05 15:08:44 +02:00
Ricardo Wurmus
2cc5110832
gnu: Add r-genelendatabase.
* gnu/packages/bioconductor.scm (r-genelendatabase): New variable.
2018-07-05 15:08:44 +02:00
Ricardo Wurmus
cf9a29b24c
gnu: Add r-genomicinteractions.
* gnu/packages/bioconductor.scm (r-genomicinteractions): New variable.
2018-06-15 09:14:01 +02:00
Ricardo Wurmus
a32279ffb6
gnu: Add r-interactionset.
* gnu/packages/bioconductor.scm (r-interactionset): New variable.
2018-06-15 09:14:01 +02:00
Ricardo Wurmus
6ffdfe6a01
gnu: Add r-riboseqr.
* gnu/packages/bioconductor.scm (r-riboseqr): New variable.
2018-06-15 07:43:23 +02:00
Ricardo Wurmus
0490f9de88
gnu: Add r-riboprofiling.
* gnu/packages/bioconductor.scm (r-riboprofiling): New variable.
2018-06-15 07:43:22 +02:00
Ricardo Wurmus
609f4ad12f
gnu: Add r-chipcomp.
* gnu/packages/bioconductor.scm (r-chipcomp): New variable.
2018-06-15 07:43:22 +02:00
Ricardo Wurmus
2bece692a6
gnu: Add r-bsgenome-mmusculus-ucsc-mm9-masked.
* gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm9-masked): New
variable.
2018-06-15 07:43:22 +02:00
Ricardo Wurmus
6fbd759b13
gnu: Add r-bsgenome-hsapiens-ucsc-hg19-masked.
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ucsc-hg19-masked): New
variable.
2018-06-15 07:43:22 +02:00
Ricardo Wurmus
dfac7eb917
gnu: Add r-bsgenome-dmelanogaster-ucsc-dm3-masked.
* gnu/packages/bioconductor.scm (r-bsgenome-dmelanogaster-ucsc-dm3-masked):
New variable.
2018-06-15 07:43:22 +02:00
Ricardo Wurmus
bb15b581f7
gnu: Add r-bayseq.
* gnu/packages/bioconductor.scm (r-bayseq): New variable.
2018-06-15 07:43:22 +02:00
Ricardo Wurmus
81b0181b6f
gnu: r-qdnaseq: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-qdnaseq): Update to 1.16.0.
[propagated-inputs]: Add r-biocparallel.
2018-06-02 13:39:06 +02:00
Ricardo Wurmus
5c0df206cf
gnu: r-cghcall: Update to 2.42.0.
* gnu/packages/bioconductor.scm (r-cghcall): Update to 2.42.0.
2018-06-02 13:39:06 +02:00
Ricardo Wurmus
205df4a4cb
gnu: r-cghbase: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-cghbase): Update to 1.40.0.
2018-06-02 13:39:06 +02:00
Ricardo Wurmus
6748708883
gnu: r-marray: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-marray): Update to 1.58.0.
[propagated-inputs]: Remove r-biobase.
2018-06-02 13:39:06 +02:00
Ricardo Wurmus
f794e85daa
gnu: r-chippeakanno: Update to 3.14.0.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.14.0.
[propagated-inputs]: Add r-biostrings, r-delayedarray, r-genomicranges,
r-iranges, and r-s4vectors.
2018-06-02 13:39:06 +02:00
Ricardo Wurmus
43734b4727
gnu: r-ripseeker: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-ripseeker): Update to 1.20.0.
2018-06-02 13:39:06 +02:00
Ricardo Wurmus
45bbccf4e7
gnu: r-diffbind: Update to 2.8.0.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 2.8.0.
[propagated-inputs]: Add r-genomicranges, r-ggplot2, and
r-summarizedexperiment.
2018-06-02 13:39:06 +02:00
Ricardo Wurmus
72427c721d
gnu: r-regioner: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.12.0.
[propagated-inputs]: Add r-s4vectors.
2018-06-02 13:39:06 +02:00
Ricardo Wurmus
2f5b3d8e90
gnu: r-hpar: Update to 1.22.2.
* gnu/packages/bioconductor.scm (r-hpar): Update to 1.22.2.
2018-06-02 13:39:06 +02:00
Ricardo Wurmus
183db725a4
gnu: Add r-bsgenome-dmelanogaster-ucsc-dm6.
* gnu/packages/bioconductor.scm (r-bsgenome-dmelanogaster-ucsc-dm6): New variable.
2018-05-15 12:56:53 +02:00
Tobias Geerinckx-Rice
f39938b177
gnu: r-multtest: Update to 2.36.0.
* gnu/packages/bioconductor.scm (r-multtest): Update to 2.36.0.
2018-05-04 02:22:01 +02:00
Roel Janssen
0ef8cc9c1c
gnu: Add r-qdnaseq.
* gnu/packages/bioconductor.scm (r-qdnaseq): New variable.
2018-04-24 14:12:32 +02:00
Roel Janssen
67ee83d6c3
gnu: Add r-cghcall.
* gnu/packages/bioconductor.scm (r-cghcall): New variable.
2018-04-24 14:12:15 +02:00
Roel Janssen
0416a0d4d5
gnu: Add r-cghbase.
* gnu/packages/bioconductor.scm (r-cghbase): New variable.
2018-04-24 14:11:51 +02:00
Roel Janssen
164502d819
gnu: Add r-marray.
* gnu/packages/bioconductor.scm (r-marray): New variable.
2018-04-24 14:11:19 +02:00
Roel Janssen
793f83efe1
gnu: Add r-chippeakanno.
* gnu/packages/bioconductor.scm (r-chippeakanno): New variable.
2018-04-24 13:59:39 +02:00
Roel Janssen
a6ae9ffd6a
gnu: Add r-multtest.
* gnu/packages/bioconductor.scm (r-multtest): New variable.
2018-04-24 13:59:33 +02:00
Roel Janssen
6d94bf6baa
gnu: Add r-ripseeker.
* gnu/packages/bioconductor.scm (r-ripseeker): New variable.
2018-04-24 13:34:29 +02:00
Roel Janssen
a5b56a5346
gnu: Add r-diffbind.
* gnu/packages/bioconductor.scm (r-diffbind): New variable.
2018-04-24 13:33:56 +02:00
Roel Janssen
183ce98849
gnu: Add r-regioner.
* gnu/packages/bioconductor.scm (r-regioner): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2018-03-30 10:47:57 -04:00
Ricardo Wurmus
fa5965990d
gnu: Add r-hpar.
* gnu/packages/bioconductor.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2018-03-02 23:24:57 +01:00