Commit graph

32918 commits

Author SHA1 Message Date
Ricardo Wurmus
9e7f55de45
gnu: Add python-doctest-ignore-unicode.
* gnu/packages/python.scm (python-doctest-ignore-unicode): New variable.
2019-01-13 10:07:06 +01:00
Ricardo Wurmus
c016e390bf
gnu: Add graphviz-2.38.
* gnu/packages/graphviz.scm (graphviz-2.38): New variable.
2019-01-13 10:07:06 +01:00
Marius Bakke
1710ffa4c7
gnu: sudo: Update to 1.8.27.
* gnu/packages/admin.scm (sudo): Update to 1.8.27.
2019-01-13 01:25:18 +01:00
Marius Bakke
cb3e055f86
gnu: libassuan: Update to 2.5.2.
* gnu/packages/gnupg.scm (libassuan): Update to 2.5.2.
2019-01-13 01:25:17 +01:00
Marius Bakke
66470a5ad0
gnu: libgxps: Update to 0.3.1.
* gnu/packages/gnome.scm (libgxps): Update to 0.3.1.
2019-01-13 01:25:17 +01:00
Marius Bakke
ad55c19211
gnu: libqmi: Update to 1.22.0.
* gnu/packages/freedesktop.scm (libqmi): Update to 1.22.0.
2019-01-13 01:25:17 +01:00
Marius Bakke
de261ace27
gnu: libmbim: Update to 1.18.0.
* gnu/packages/freedesktop.scm (libmbim): Update to 1.18.0.
2019-01-13 01:25:17 +01:00
Marius Bakke
8bcae1e60c
gnu: libsodium: Update to 1.0.17.
* gnu/packages/crypto.scm (libsodium): Update to 1.0.17.
2019-01-13 01:25:17 +01:00
Marius Bakke
0b014776c9
gnu: exempi: Update to 2.5.0.
* gnu/packages/freedesktop.scm (exempi): Update to 2.5.0.
2019-01-13 01:25:17 +01:00
Marius Bakke
00262db23a
gnu: seabios: Update to 1.12.0.
* gnu/packages/firmware.scm (seabios): Update to 1.12.0.
2019-01-13 01:25:17 +01:00
Marius Bakke
b2e765de4c
gnu: httpd: Update to 2.4.37.
* gnu/packages/web.scm (httpd): Update to 2.4.37.
2019-01-13 01:25:17 +01:00
Marius Bakke
1d7fbe0947
gnu: nasm: Update license.
* gnu/packages/assembly.scm (nasm)[license]: Change to BSD-2.
2019-01-13 01:25:16 +01:00
Marius Bakke
80459f5a21
gnu: nasm: Update home page.
* gnu/packages/assembly.scm (nasm)[home-page]: Use HTTPS.
2019-01-13 01:25:16 +01:00
Marius Bakke
9f1448b74a
gnu: libgphoto2: Update to 2.5.22.
* gnu/packages/photo.scm (libgphoto2): Update to 2.5.22.
2019-01-13 01:25:16 +01:00
Marius Bakke
ef61969c52
gnu: re2: Update to 2019-01-01.
* gnu/packages/regex.scm (re2): Update to 2019-01-01.
2019-01-13 01:25:16 +01:00
Marius Bakke
c06ef010e3
gnu: libsecret: Update to 0.18.7.
* gnu/packages/gnome.scm (libsecret): Update to 0.18.7.
[native-inputs]: Remove INTLTOOL.  Add GETTEXT-MINIMAL.
2019-01-13 01:25:16 +01:00
Marius Bakke
48d5818a0e
gnu: fluidsynth: Update to 2.0.3.
* gnu/packages/audio.scm (fluidsynth): Update to 2.0.3.
2019-01-13 01:25:16 +01:00
Marius Bakke
bf135622bd
gnu: rofi: Update to 1.5.2.
* gnu/packages/xdisorg.scm (rofi): Update to 1.5.2.
2019-01-13 01:25:16 +01:00
Marius Bakke
2bb187c484
gnu: xscreensaver: Update to 5.42.
* gnu/packages/xdisorg.scm (xscreensaver): Update to 5.42.
[arguments]: Add "CFLAGS=-std=c99" to #:make-flags.
2019-01-13 01:25:16 +01:00
Marius Bakke
0c4cee13b2
gnu: libcmis: Update to 0.5.2.
* gnu/packages/libreoffice.scm (libcmis): Update to 0.5.2.
[source](uri): Use XZ-compressed tarball.
[arguments]: Remove #:phases.  Don't pass "--disable-werror" in #:configure-flags.
2019-01-13 01:25:15 +01:00
Marius Bakke
48a51af9d2
gnu: http-parser: Update to 2.9.0.
* gnu/packages/web.scm (http-parser): Update to 2.9.0.
2019-01-13 01:25:15 +01:00
Marius Bakke
304db09257
gnu: http-parser: Download from git.
* gnu/packages/web.scm (http-parser)[source]: Change to GIT-FETCH.
2019-01-13 01:25:15 +01:00
Marius Bakke
9c2094785d
gnu: libetonyek: Adjust inputs.
* gnu/packages/libreoffice.scm (libetonyek)[native-inputs]: Remove LIBLANGTAG.
Move GLM and MDDS to ...
[inputs]: ... here.
[propagated-inputs]: Add LIBLANGTAG and ZLIB.
2019-01-13 01:25:15 +01:00
Marius Bakke
7c3acfcb69
gnu: libetonyek: Update to 0.1.9.
* gnu/packages/libreoffice.scm (libetonyek): Update to 0.1.9.
[arguments]: Remove #:phases.
2019-01-13 01:25:15 +01:00
Marius Bakke
b1d2e0b4e0
gnu: libcdr: Update to 0.1.5.
* gnu/packages/libreoffice.scm (libcdr): Update to 0.1.5.
[source](uri): Download over HTTPS.
[arguments]: Remove.
2019-01-13 01:25:15 +01:00
Kei Kebreau
5b9c2690af
gnu: tintin++: Update to 2.01.5.
* gnu/packages/games.scm (tintin++): Update to 2.01.5.
2019-01-12 18:37:38 -05:00
Ricardo Wurmus
c6e9b494e8
gnu: r-ruvseq: Update to 1.16.1.
* gnu/packages/bioconductor.scm (r-ruvseq): Update to 1.16.1.
2019-01-12 23:35:19 +01:00
Ricardo Wurmus
c86fc96987
gnu: r-inspect: Update to 1.12.1.
* gnu/packages/bioconductor.scm (r-inspect): Update to 1.12.1.
[propagated-inputs]: Add r-deseq2, r-plgem, r-shiny, r-summarizedexperiment,
and r-txdb-mmusculus-ucsc-mm9-knowngene.
2019-01-12 23:35:19 +01:00
Ricardo Wurmus
d220babf34
gnu: Add r-txdb-mmusculus-ucsc-mm9-knowngene.
* gnu/packages/bioconductor.scm (r-txdb-mmusculus-ucsc-mm9-knowngene): New
variable.
2019-01-12 23:35:19 +01:00
Ricardo Wurmus
cad6fb2dec
gnu: Add r-plgem.
* gnu/packages/bioconductor.scm (r-plgem): New variable.
2019-01-12 23:35:19 +01:00
Ricardo Wurmus
45dcd7dcfd
gnu: r-rots: Update to 1.10.1.
* gnu/packages/bioconductor.scm (r-rots): Update to 1.10.1.
2019-01-12 23:35:19 +01:00
Ricardo Wurmus
0b469ee225
gnu: r-glimma: Update to 1.10.1.
* gnu/packages/bioconductor.scm (r-glimma): Update to 1.10.1.
2019-01-12 23:35:19 +01:00
Ricardo Wurmus
7f2b1c4af0
gnu: r-goseq: Update to 1.34.1.
* gnu/packages/bioconductor.scm (r-goseq): Update to 1.34.1.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus
add2b19561
gnu: r-chippeakanno: Update to 3.16.1.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.16.1.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus
c476edc2cd
gnu: r-rtracklayer: Update to 1.42.1.
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.42.1.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus
1e107b0960
gnu: r-scater: Update to 1.10.1.
* gnu/packages/bioinformatics.scm (r-scater): Update to 1.10.1.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus
0f268bb275
gnu: r-singlecellexperiment: Update to 1.4.1.
* gnu/packages/bioinformatics.scm (r-singlecellexperiment): Update to 1.4.1.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus
a0224bd4f6
gnu: r-rhdf5lib: Update to 1.4.2.
* gnu/packages/bioinformatics.scm (r-rhdf5lib): Update to 1.4.2.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus
40561d0249
gnu: r-hdf5array: Update to 1.10.1.
* gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.10.1.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus
ad10b3979d
gnu: r-qvalue: Update to 2.14.1.
* gnu/packages/bioinformatics.scm (r-qvalue): Update to 2.14.1.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus
19cacb5a2d
gnu: r-gviz: Update to 1.26.4.
* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.26.4.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus
c80595935d
gnu: r-biovizbase: Update to 1.30.1.
* gnu/packages/bioinformatics.scm (r-biovizbase): Update to 1.30.1.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus
27194effd7
gnu: r-ensembldb: Update to 2.6.3.
* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.6.3.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus
43931ff72f
gnu: r-dirichletmultinomial: Update to 1.24.1.
* gnu/packages/bioinformatics.scm (r-dirichletmultinomial): Update to 1.24.1.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus
15d89fe9f8
gnu: r-gage: Update to 2.32.1.
* gnu/packages/bioinformatics.scm (r-gage): Update to 2.32.1.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus
4615cf9f1a
gnu: r-annotationhub: Update to 2.14.2.
* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.14.2.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus
ab4a862ab8
gnu: r-edaseq: Update to 2.16.3.
* gnu/packages/bioinformatics.scm (r-edaseq): Update to 2.16.3.
[propagated-inputs]: Add r-biocmanager.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus
3bdc41b352
gnu: r-deseq: Update to 1.34.1.
* gnu/packages/bioinformatics.scm (r-deseq): Update to 1.34.1.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus
9abf344f8b
gnu: r-msnid: Update to 1.16.1.
* gnu/packages/bioinformatics.scm (r-msnid): Update to 1.16.1.
2019-01-12 23:35:17 +01:00
Ricardo Wurmus
880ed11e9f
gnu: r-msnbase: Update to 2.8.3.
* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.8.3.
2019-01-12 23:35:17 +01:00