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Author SHA1 Message Date
zimoun
a4f4a55283
gnu: r-reactomepa: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-reactomepa): Update to 1.34.0.
 2020-12-09 12:12:34 +01:00
zimoun
26224e09ae
gnu: r-graphite: Update to 1.36.0. 
* gnu/packages/bioconductor.scm (r-graphite): Update to 1.36.0.
 2020-12-09 12:12:34 +01:00
zimoun
95e30d8f6e
gnu: r-biobroom: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-biobroom): Update to 1.22.0.
 2020-12-09 12:12:33 +01:00
zimoun
2f36b0406e
gnu: r-bioassayr: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-bioassayr): Update to 1.28.0.
 2020-12-09 12:12:33 +01:00
zimoun
95ef268142
gnu: r-chemminer: Update to 3.42.0. 
* gnu/packages/bioconductor.scm (r-chemminer): Update to 3.42.0.
 2020-12-09 12:12:33 +01:00
zimoun
1e28867803
gnu: r-bigpint: Update to 1.6.0. 
* gnu/packages/bioconductor.scm (r-bigpint): Update to 1.6.0.
 2020-12-09 12:12:33 +01:00
zimoun
e80f8262f6
gnu: r-bigmemoryextras: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-bigmemoryextras): Update to 1.38.0.
 2020-12-09 12:12:33 +01:00
zimoun
0f94a9edb0
gnu: r-biggr: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-biggr): Update to 1.26.0.
 2020-12-09 12:12:33 +01:00
zimoun
249b703056
gnu: r-hyperdraw: Update to 1.42.0. 
* gnu/packages/bioconductor.scm (r-hyperdraw): Update to 1.42.0.
 2020-12-09 12:12:33 +01:00
zimoun
294fd58a42
gnu: r-hypergraph: Update to 1.62.0. 
* gnu/packages/bioconductor.scm (r-hypergraph): Update to 1.62.0.
 2020-12-09 12:12:33 +01:00
zimoun
3320f044a3
gnu: r-rsbml: Update to 2.48.0. 
* gnu/packages/bioconductor.scm (r-rsbml): Update to 2.48.0.
 2020-12-09 12:12:33 +01:00
zimoun
d57be63323
gnu: r-bifet: Update to 1.10.0. 
* gnu/packages/bioconductor.scm (r-bifet): Update to 1.10.0.
 2020-12-09 12:12:33 +01:00
zimoun
4ec665693d
gnu: r-bicare: Update to 1.48.0. 
* gnu/packages/bioconductor.scm (r-bicare): Update to 1.48.0.
 2020-12-09 12:12:33 +01:00
zimoun
2219bef12f
gnu: r-bhc: Update to 1.42.0. 
* gnu/packages/bioconductor.scm (r-bhc): Update to 1.42.0.
 2020-12-09 12:12:33 +01:00
zimoun
3cebe2745a
gnu: r-bgx: Update to 1.56.0. 
* gnu/packages/bioconductor.scm (r-bgx): Update to 1.56.0.
 2020-12-09 12:12:33 +01:00
zimoun
fad5da32dc
gnu: r-bgmix: Update to 1.50.0. 
* gnu/packages/bioconductor.scm (r-bgmix): Update to 1.50.0.
 2020-12-09 12:12:32 +01:00
zimoun
fa7e242910
gnu: r-unifiedwmwqpcr: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-unifiedwmwqpcr): Update to 1.26.0.
 2020-12-09 12:12:32 +01:00
zimoun
949626f209
gnu: r-htqpcr: Update to 1.44.0. 
* gnu/packages/bioconductor.scm (r-htqpcr): Update to 1.44.0.
 2020-12-09 12:12:32 +01:00
zimoun
44ecd5f77f
gnu: r-variancepartition: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.20.0.
 2020-12-09 12:12:32 +01:00
zimoun
45ea773f94
gnu: r-variantfiltering: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-variantfiltering): Update to 1.26.0.
 2020-12-09 12:12:32 +01:00
zimoun
87f704b43c
gnu: r-timeseriesexperiment: Update to 1.8.0. 
* gnu/packages/bioconductor.scm (r-timeseriesexperiment): Update to 1.8.0.
 2020-12-09 12:12:32 +01:00
zimoun
fd7e23b551
gnu: r-wavcluster: Update to 2.24.0. 
* gnu/packages/bioconductor.scm (r-wavcluster): Update to 2.24.0.
 2020-12-09 12:12:32 +01:00
zimoun
0c53f27dd6
gnu: r-reqon: Update to 1.36.0. 
* gnu/packages/bioconductor.scm (r-reqon): Update to 1.36.0.
 2020-12-09 12:12:32 +01:00
zimoun
42e00c0923
gnu: r-seqbias: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-seqbias): Update to 1.38.0.
 2020-12-09 12:12:32 +01:00
zimoun
a50779b8a3
gnu: r-gdsfmt: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.26.0.
 2020-12-09 12:12:32 +01:00
zimoun
e7b61ba7f6
gnu: r-roc: Update to 1.66.0. 
* gnu/packages/bioconductor.scm (r-roc): Update to 1.66.0.
 2020-12-09 12:12:31 +01:00
zimoun
5d1bd61137
gnu: r-genie3: Update to 1.12.0. 
* gnu/packages/bioconductor.scm (r-genie3): Update to 1.12.0.
 2020-12-09 12:12:31 +01:00
zimoun
7954fe16a0
gnu: r-cicero: Update to 1.8.0. 
* gnu/packages/bioconductor.scm (r-cicero): Update to 1.8.0.
 2020-12-09 12:12:31 +01:00
zimoun
6481357330
gnu: r-rcistarget: Update to 1.10.0. 
* gnu/packages/bioconductor.scm (r-rcistarget): Update to 1.10.0.
 2020-12-09 12:12:31 +01:00
zimoun
fafaeab48b
gnu: r-depecher: Update to 1.6.0. 
* gnu/packages/bioconductor.scm (r-depecher): Update to 1.6.0.
 2020-12-09 12:12:31 +01:00
zimoun
0e78ce36f0
gnu: r-mixomics: Update to 6.14.0. 
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.14.0.
 2020-12-09 12:12:31 +01:00
zimoun
1f7ddaf0fb
gnu: r-flowsom: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-flowsom): Update to 1.22.0.
 2020-12-09 12:12:31 +01:00
zimoun
63033b159a
gnu: r-cytoml: Update to 2.2.1. 
* gnu/packages/bioconductor.scm (r-cytoml): Update to 2.2.1.
 2020-12-09 12:12:31 +01:00
zimoun
5abf0a0dd2
gnu: r-opencyto: Update to 2.2.0. 
* gnu/packages/bioconductor.scm (r-opencyto): Update to 2.2.0.
 2020-12-09 12:12:30 +01:00
zimoun
fd11c7b80f
gnu: r-flowstats: Update to 4.2.0. 
* gnu/packages/bioconductor.scm (r-flowstats): Update to 4.2.0.
 2020-12-09 12:12:30 +01:00
zimoun
1b347814f8
gnu: r-flowworkspace: Update to 4.2.0. 
* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 4.2.0.
[inputs]: Add zlib.
[propagated-inputs]: Add r-aws-s3 and r-aws-signature.  Remove r-stringr.
 2020-12-09 12:12:30 +01:00
zimoun
ffa42c7741
gnu: Add r-aws-s3. 
* gnu/packages/cran.scm (r-aws-s3): New variable.
 2020-12-09 12:12:30 +01:00
zimoun
7f940bd093
gnu: Add r-aws-signature. 
* gnu/packages/cran.scm (r-aws-signature): New variable.
 2020-12-09 12:12:30 +01:00
zimoun
5bab0b7eee
gnu: r-rprotobuflib: Update to 2.2.0. 
* gnu/packages/bioconductor.scm (r-rprotobuflib): Update to 2.2.0.
 2020-12-09 12:12:30 +01:00
zimoun
33c5b6d7ca
gnu: r-flowclust: Update to 3.28.0. 
* gnu/packages/bioconductor.scm (r-flowclust): Update to 3.28.0.
 2020-12-09 12:12:30 +01:00
zimoun
d5a53ab76b
gnu: r-flowviz: Update to 1.54.0. 
* gnu/packages/bioconductor.scm (r-flowviz): Update to 1.54.0.
 2020-12-09 12:12:30 +01:00
zimoun
eac1eaaa0f
gnu: r-ncdfflow: Update to 2.36.0. 
* gnu/packages/bioconductor.scm (r-ncdfflow): Update to 2.36.0.
 2020-12-09 12:12:30 +01:00
zimoun
2cd78131cc
gnu: r-flowmeans: Update to 1.50.0. 
* gnu/packages/bioconductor.scm (r-flowmeans): Update to 1.50.0.
 2020-12-09 12:12:30 +01:00
zimoun
3f0e93b47b
gnu: r-flowcore: Update to 2.2.0. 
* gnu/packages/bioconductor.scm (r-flowcore): Update to 2.2.0.
[propagated-inputs]: Add r-s4vectors.
 2020-12-09 12:12:29 +01:00
zimoun
c6ccd4fcb1
gnu: r-cytolib: Update to 2.2.0. 
* gnu/packages/bioconductor.scm (r-cytolib): Update to 2.2.0.
[native-inputs]: Add pkg-config.
 2020-12-09 12:12:29 +01:00
zimoun
a49024e6af
gnu: r-consensusclusterplus: Update to 1.54.0. 
* gnu/packages/bioconductor.scm (r-consensusclusterplus): Update to 1.54.0.
 2020-12-09 12:12:29 +01:00
zimoun
d361222d8f
gnu: r-flowutils: Update to 1.54.0. 
* gnu/packages/bioconductor.scm (r-flowutils): Update to 1.54.0.
 2020-12-09 12:12:29 +01:00
zimoun
d764f1e7fe
gnu: r-rsubread: Update to 2.4.2. 
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.4.2.
 2020-12-09 12:12:29 +01:00
zimoun
458aa44622
gnu: r-annotatr: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-annotatr): Update to 1.16.0.
 2020-12-09 12:12:29 +01:00
zimoun
26e417063f
gnu: r-biosigner: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-biosigner): Update to 1.18.0.
 2020-12-09 12:12:29 +01:00
zimoun
59daf6ed12
gnu: r-ropls: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-ropls): Update to 1.22.0.
 2020-12-09 12:12:29 +01:00
zimoun
e78e04d2ee
gnu: r-multidataset: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-multidataset): Update to 1.18.0.
 2020-12-09 12:12:29 +01:00
zimoun
979b1edc52
gnu: r-birewire: Update to 3.22.0. 
* gnu/packages/bioconductor.scm (r-birewire): Update to 3.22.0.
 2020-12-09 12:12:29 +01:00
zimoun
d8a7bf768f
gnu: r-rqc: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-rqc): Update to 1.24.0.
 2020-12-09 12:12:29 +01:00
zimoun
1b4c271970
gnu: r-quasr: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-quasr): Update to 1.30.0.
 2020-12-09 12:12:29 +01:00
zimoun
c36d888f42
gnu: r-rhisat2: Update to 1.6.0. 
* gnu/packages/bioconductor.scm (r-rhisat2): Update to 1.6.0.
 2020-12-09 12:12:28 +01:00
zimoun
ca0271c550
gnu: r-sgseq: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-sgseq): Update to 1.24.0.
 2020-12-09 12:12:28 +01:00
zimoun
ea86d93e8c
gnu: r-rbowtie: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-rbowtie): Update to 1.30.0.
 2020-12-09 12:12:28 +01:00
zimoun
4bc0675de0
gnu: r-iclusterplus: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-iclusterplus): Update to 1.26.0.
 2020-12-09 12:12:28 +01:00
zimoun
e65e81d285
gnu: r-biocfilecache: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-biocfilecache): Update to 1.14.0.
 2020-12-09 12:12:28 +01:00
zimoun
0067589a9e
gnu: r-arrmnormalization: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-arrmnormalization): Update to 1.30.0.
 2020-12-09 12:12:28 +01:00
zimoun
d115db7f7d
gnu: r-progeny: Update to 1.12.0. 
* gnu/packages/bioconductor.scm (r-progeny): Update to 1.12.0.
 2020-12-09 12:12:28 +01:00
zimoun
9834d1ab38
gnu: r-rbowtie2: Update to 1.12.0. 
* gnu/packages/bioconductor.scm (r-rbowtie2): Update to 1.12.0.
 2020-12-09 12:12:28 +01:00
zimoun
59fafa19f5
gnu: r-zfpkm: Update to 1.12.0. 
* gnu/packages/bioconductor.scm (r-zfpkm): Update to 1.12.0.
 2020-12-09 12:12:28 +01:00
zimoun
d176ad34d7
gnu: r-webbioc: Update to 1.62.0. 
* gnu/packages/bioconductor.scm (r-webbioc): Update to 1.62.0.
 2020-12-09 12:12:28 +01:00
zimoun
ba53681a46
gnu: r-widgettools: Update to 1.68.0. 
* gnu/packages/bioconductor.scm (r-widgettools): Update to 1.68.0.
 2020-12-09 12:12:28 +01:00
zimoun
397bcd2ccd
gnu: r-wiggleplotr: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-wiggleplotr): Update to 1.14.0.
 2020-12-09 12:12:28 +01:00
zimoun
dc7c6368ed
gnu: r-wrench: Update to 1.8.0. 
* gnu/packages/bioconductor.scm (r-wrench): Update to 1.8.0.
 2020-12-09 12:12:28 +01:00
zimoun
a3af40eaf5
gnu: r-xcms: Update to 3.12.0. 
* gnu/packages/bioconductor.scm (r-xcms): Update to 3.12.0.
[propagated-inputs]: Add r-mscoreutils.
 2020-12-09 12:12:27 +01:00
zimoun
fa2201c108
gnu: Add r-mscoreutils. 
* gnu/packages/bioconductor.scm (r-mscoreutils): New variable.
 2020-12-09 12:12:27 +01:00
zimoun
1e536c307c
gnu: Update r-msnbase to 2.16.0. 
* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.16.0.
 2020-12-09 12:12:27 +01:00
zimoun
f4e19e62bb
gnu: r-massspecwavelet: Update to 1.56.0. 
* gnu/packages/bioconductor.scm (r-massspecwavelet): Update to 1.56.0.
 2020-12-09 12:12:27 +01:00
zimoun
7f71341e5d
gnu: r-xbseq: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-xbseq): Update to 1.22.0.
 2020-12-09 12:12:27 +01:00
zimoun
72476adef5
gnu: r-roar: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-roar): Update to 1.26.0.
 2020-12-09 12:12:27 +01:00
zimoun
94dee0af25
gnu: r-yaqcaffy: Update to 1.50.0. 
* gnu/packages/bioconductor.scm (r-yaqcaffy): Update to 1.50.0.
 2020-12-09 12:12:27 +01:00
zimoun
48aaef23b3
gnu: r-simpleaffy: Update to 2.66.0. 
* gnu/packages/bioconductor.scm (r-simpleaffy): Update to 2.66.0.
 2020-12-09 12:12:27 +01:00
zimoun
3d41f0c297
gnu: r-gcrma: Update to 2.62.0. 
* gnu/packages/bioconductor.scm (r-gcrma): Update to 2.62.0.
 2020-12-09 12:12:27 +01:00
zimoun
36f3a19ae6
gnu: r-somaticsignatures: Update to 2.26.0. 
* gnu/packages/bioconductor.scm (r-somaticsignatures): Update to 2.26.0.
 2020-12-09 12:12:27 +01:00
zimoun
0836ef6b69
gnu: r-gtrellis: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-gtrellis): Update to 1.22.0.
 2020-12-09 12:12:27 +01:00
zimoun
65ba4ba5f1
gnu: r-yamss: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-yamss): Update to 1.16.0.
 2020-12-09 12:12:27 +01:00
zimoun
ba0bf98dff
gnu: r-ebimage: Update to 4.32.0. 
* gnu/packages/bioconductor.scm (r-ebimage): Update to 4.32.0.
 2020-12-09 12:12:27 +01:00
zimoun
ff8b915377
gnu: r-aucell: Update to 1.12.0. 
* gnu/packages/bioconductor.scm (r-aucell): Update to 1.12.0.
 2020-12-09 12:12:26 +01:00
zimoun
85c6636bac
gnu: r-allelicimbalance: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-allelicimbalance): Update to 1.28.0.
 2020-12-09 12:12:26 +01:00
zimoun
577915421d
gnu: r-annotationtools: Update to 1.64.0. 
* gnu/packages/bioconductor.scm (r-annotationtools): Update to 1.64.0.
 2020-12-09 12:12:26 +01:00
zimoun
bc12a4b660
gnu: r-annotationfuncs: Update to 1.40.0. 
* gnu/packages/bioconductor.scm (r-annotationfuncs): Update to 1.40.0.
 2020-12-09 12:12:26 +01:00
zimoun
8a7f7112f1
gnu: r-abaenrichment: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-abaenrichment): Update to 1.20.0.
 2020-12-09 12:12:26 +01:00
zimoun
c3b69d6333
gnu: r-gofuncr: Update to 1.10.0. 
* gnu/packages/bioconductor.scm (r-gofuncr): Update to 1.10.0.
 2020-12-09 12:12:26 +01:00
zimoun
2ba61c67aa
gnu: r-atacseqqc: Update to 1.14.4. 
* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.14.4.
 2020-12-09 12:12:26 +01:00
zimoun
392806183d
gnu: r-genomicscores: Update to 2.2.0. 
* gnu/packages/bioconductor.scm (r-genomicscores): Update to 2.2.0.
 2020-12-09 12:12:26 +01:00
zimoun
4b4cd2b8a2
gnu: r-motifstack: Update to 1.34.0. 
* gnu/packages/bioconductor.scm (r-motifstack): Update to 1.34.0.
 2020-12-09 12:12:26 +01:00
zimoun
301e549c22
gnu: r-motifbreakr: Update to 2.4.0. 
* gnu/packages/bioconductor.scm (r-motifbreakr): Update to 2.4.0.
 2020-12-09 12:12:26 +01:00
zimoun
a2bae16780
gnu: r-motifdb: Update to 1.32.0. 
* gnu/packages/bioconductor.scm (r-motifdb): Update to 1.32.0.
 2020-12-09 12:12:26 +01:00
zimoun
41071edcac
gnu: r-rgadem: Update to 2.38.0. 
* gnu/packages/bioconductor.scm (r-rgadem): Update to 2.38.0.
 2020-12-09 12:12:26 +01:00
zimoun
d5dcf1bb4b
gnu: r-bacon: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-bacon): Update to 1.18.0.
 2020-12-09 12:12:26 +01:00
zimoun
8816139e84
gnu: r-abseqr: Update to 1.8.0. 
* gnu/packages/bioconductor.scm (r-abseqr): Update to 1.8.0.
 2020-12-09 12:12:26 +01:00
zimoun
68efaafe32
gnu: r-a4: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-a4): Update to 1.38.0.
 2020-12-09 12:12:25 +01:00
zimoun
564d4279f2
gnu: r-a4base: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-a4base): Update to 1.38.0.
 2020-12-09 12:12:25 +01:00
zimoun
2fb8298c80
gnu: r-a4reporting: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-a4reporting): Update to 1.38.0.
 2020-12-09 12:12:25 +01:00
zimoun
85155e2ed9
gnu: r-a4preproc: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-a4preproc): Update to 1.38.0.
 2020-12-09 12:12:25 +01:00
zimoun
fa51705f19
gnu: r-a4classif: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-a4classif): Update to 1.38.0.
 2020-12-09 12:12:25 +01:00
zimoun
c47a8cd9e1
gnu: r-a4core: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-a4core): Update to 1.38.0.
 2020-12-09 12:12:25 +01:00
zimoun
4f82931de4
gnu: r-mlinterfaces: Update to 1.70.0. 
* gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.70.0.
 2020-12-09 12:12:25 +01:00
zimoun
3fd84a461d
gnu: r-clusterprofiler: Update to 3.18.0. 
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 3.18.0.
 2020-12-09 12:12:25 +01:00
Roel Janssen
eb3d17eb99
gnu: r-enrichplot: Update to 1.10.1. 
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.10.1.
[propagated-inputs]: Remove r-annotationdbi, r-europepmc, r-ggplotify,
r-ggridges, and r-gridextra; add r-magrittr and r-shadowtext.
 2020-12-09 12:12:25 +01:00
Roel Janssen
b7d1ea7bfa
gnu: Add r-shadowtext. 
* gnu/packages/cran.scm (r-shadowtext): New variable.
 2020-12-09 12:12:25 +01:00
zimoun
aeb1d56f8f
gnu: r-dose: Update to 3.16.0. 
* gnu/packages/bioconductor.scm (r-dose): Update to 3.16.0.
 2020-12-09 12:12:25 +01:00
zimoun
d68a9ffa68
gnu: r-fgsea: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-fgsea): Update to 1.16.0.
 2020-12-09 12:12:25 +01:00
zimoun
7dabc6298f
gnu: r-sigpathway: Update to 1.58.0. 
* gnu/packages/bioconductor.scm (r-sigpathway): Update to 1.58.0.
 2020-12-09 12:12:25 +01:00
zimoun
33c905b9c0
gnu: r-anota: Update to 1.38.0. 
* gnu/packages/bioconductor.scm (r-anota): Update to 1.38.0.
 2020-12-09 12:12:24 +01:00
zimoun
b2084e4d21
gnu: r-gosemsim: Update to 2.16.1. 
* gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.16.1.
 2020-12-09 12:12:24 +01:00
zimoun
9813d24ddf
gnu: r-heatplus: Update to 2.36.0. 
* gnu/packages/bioconductor.scm (r-heatplus): Update to 2.36.0.
 2020-12-09 12:12:24 +01:00
zimoun
67837d4afe
gnu: r-varianttools: Update to 1.32.0. 
* gnu/packages/bioconductor.scm (r-varianttools): Update to 1.32.0.
 2020-12-09 12:12:24 +01:00
zimoun
2a1a6d74d6
gnu: r-ioniser: Update to 2.14.0. 
* gnu/packages/bioconductor.scm (r-ioniser): Update to 2.14.0.
 2020-12-09 12:12:24 +01:00
zimoun
37e09611f2
gnu: r-linnorm: Update to 2.14.0. 
* gnu/packages/bioconductor.scm (r-linnorm): Update to 2.14.0.
 2020-12-09 12:12:24 +01:00
zimoun
50c5fee6b5
gnu: r-bumphunter: Update to 1.32.0. 
* gnu/packages/bioconductor.scm (r-bumphunter): Update to 1.32.0.
 2020-12-09 12:12:24 +01:00
zimoun
0fd830feaa
gnu: r-siggenes: Update to 1.64.0. 
* gnu/packages/bioconductor.scm (r-siggenes): Update to 1.64.0.
 2020-12-09 12:12:24 +01:00
zimoun
e89966e977
gnu: r-illuminaio: Update to 0.32.0. 
* gnu/packages/bioconductor.scm (r-illuminaio): Update to 0.32.0.
 2020-12-09 12:12:24 +01:00
zimoun
5c4edeef02
gnu: r-geoquery: Update to 2.58.0. 
* gnu/packages/bioconductor.scm (r-geoquery): Update to 2.58.0.
 2020-12-09 12:12:24 +01:00
zimoun
bde9dc5b97
gnu: r-scone: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-scone): Update to 1.14.0.
 2020-12-09 12:12:24 +01:00
zimoun
8396c45eda
gnu: r-noiseq: Update to 2.34.0. 
* gnu/packages/bioconductor.scm (r-noiseq): Update to 2.34.0.
 2020-12-09 12:12:24 +01:00
zimoun
38bc0bf808
gnu: r-monocle: Update to 2.18.0. 
* gnu/packages/bioconductor.scm (r-monocle): Update to 2.18.0.
 2020-12-09 12:12:24 +01:00
zimoun
532b106856
gnu: r-mast: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-mast): Update to 1.16.0.
 2020-12-09 12:12:24 +01:00
zimoun
e26b5eefda
gnu: r-icobra: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-icobra): Update to 1.18.0.
 2020-12-09 12:12:23 +01:00
zimoun
95b1f3507a
gnu: r-ihw: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-ihw): Update to 1.18.0.
 2020-12-09 12:12:23 +01:00
zimoun
378d67c950
gnu: r-lpsymphony: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-lpsymphony): Update to 1.18.0.
 2020-12-09 12:12:23 +01:00
zimoun
37da451316
gnu: r-karyoploter: Update to 1.16.0. 
* gnu/packages/bioconductor.scm (r-karyoploter): Update to 1.16.0.
 2020-12-09 12:12:23 +01:00
zimoun
939c888dac
gnu: r-ebseq: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-ebseq): Update to 1.30.0.
 2020-12-09 12:12:23 +01:00
zimoun
850f4c2a36
gnu: r-dnacopy: Update to 1.64.0. 
* gnu/packages/bioconductor.scm (r-dnacopy): Update to 1.64.0.
 2020-12-09 12:12:23 +01:00
zimoun
43d8db0462
gnu: r-copynumber: Update to 1.30.0. 
* gnu/packages/bioconductor.scm (r-copynumber): Update to 1.30.0.
 2020-12-09 12:12:23 +01:00
zimoun
ff4d080422
gnu: r-chipexoqual: Update to 1.14.0. 
* gnu/packages/bioconductor.scm (r-chipexoqual): Update to 1.14.0.
 2020-12-09 12:12:23 +01:00
zimoun
967fc58392
gnu: r-savr: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-savr): Update to 1.28.0.
 2020-12-09 12:12:23 +01:00
zimoun
4217307fb3
gnu: r-destiny: Update to 3.4.0. 
* gnu/packages/bioconductor.scm (r-destiny): Update to 3.4.0.
[propagated-inputs]: Remove r-nbconvertr.
 2020-12-09 12:12:23 +01:00
zimoun
bbae34aae7
gnu: r-biocneighbors: Update to 1.8.0. 
* gnu/packages/bioconductor.scm (r-biocneighbors): Update to 1.8.0.
 2020-12-09 12:12:23 +01:00
zimoun
a55b1622c5
gnu: r-ruvseq: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-ruvseq): Update to 1.24.0.
 2020-12-09 12:12:23 +01:00
zimoun
874a774fcc
gnu: r-dnabarcodes: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-dnabarcodes): Update to 1.20.0.
 2020-12-09 12:12:22 +01:00
zimoun
41d6b41feb
gnu: r-inspect: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-inspect): Update to 1.20.0.
 2020-12-09 12:12:22 +01:00
zimoun
1c9bdfcf3c
gnu: r-plgem: Update to 1.62.0. 
* gnu/packages/bioconductor.scm (r-plgem): Update to 1.62.0.
 2020-12-09 12:12:22 +01:00
zimoun
0ef40b23b6
gnu: r-rots: Update to 1.18.0. 
* gnu/packages/bioconductor.scm (r-rots): Update to 1.18.0.
 2020-12-09 12:12:22 +01:00
zimoun
3dab4570fa
gnu: r-glimma: Update to 2.0.0. 
* gnu/packages/bioconductor.scm (r-glimma): Update to 2.0.0.
 2020-12-09 12:12:22 +01:00
zimoun
c97bcfbd78
gnu: r-goseq: Update to 1.42.0. 
* gnu/packages/bioconductor.scm (r-goseq): Update to 1.42.0.
 2020-12-09 12:12:22 +01:00
zimoun
d27dfbf7f9
gnu: r-ctc: Update to 1.64.0. 
* gnu/packages/bioconductor.scm (r-ctc): Update to 1.64.0.
 2020-12-09 12:12:22 +01:00
zimoun
3813c9fe56
gnu: r-riboseqr: Update to 1.24.0. 
* gnu/packages/bioconductor.scm (r-riboseqr): Update to 1.24.0.
 2020-12-09 12:12:22 +01:00
zimoun
03b655c524
gnu: r-riboprofiling: Update to 1.20.0. 
* gnu/packages/bioconductor.scm (r-riboprofiling): Update to 1.20.0.
 2020-12-09 12:12:22 +01:00
zimoun
63572b0c12
gnu: r-bayseq: Update to 2.24.0. 
* gnu/packages/bioconductor.scm (r-bayseq): Update to 2.24.0.
 2020-12-09 12:12:22 +01:00
zimoun
3b6484097c
gnu: r-qdnaseq: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-qdnaseq): Update to 1.26.0.
 2020-12-09 12:12:22 +01:00
zimoun
724000356e
gnu: r-cghcall: Update to 2.52.0. 
* gnu/packages/bioconductor.scm (r-cghcall): Update to 2.52.0.
 2020-12-09 12:12:22 +01:00
zimoun
ee052d05f1
gnu: r-cghbase: Update to 1.50.0. 
* gnu/packages/bioconductor.scm (r-cghbase): Update to 1.50.0.
 2020-12-09 12:12:22 +01:00
zimoun
6e6c627230
gnu: r-marray: Update to 1.68.0. 
* gnu/packages/bioconductor.scm (r-marray): Update to 1.68.0.
 2020-12-09 12:12:22 +01:00
zimoun
d068d96743
gnu: r-chippeakanno: Update to 3.24.0. 
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.24.0.
 2020-12-09 12:12:21 +01:00
zimoun
f519b4dc01
gnu: r-graph: Update to 1.68.0. 
* gnu/packages/bioconductor.scm (r-graph): Update to 1.68.0.
 2020-12-09 12:12:21 +01:00
zimoun
1e6920c521
gnu: r-multtest: Update to 2.46.0. 
* gnu/packages/bioconductor.scm (r-multtest): Update to 2.46.0.
 2020-12-09 12:12:21 +01:00
Roel Janssen
341ebaaa01
gnu: r-diffbind: Update to 3.0.7. 
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.0.7.
[propagated-inputs]: Add r-apeglm, r-ashr, and r-greylistchip; remove r-edger.
 2020-12-09 12:12:21 +01:00
Roel Janssen
6e396c4bff
gnu: Add r-greylistchip. 
* gnu/packages/bioconductor.scm (r-greylistchip): New variable.
 2020-12-09 12:12:21 +01:00
Roel Janssen
c84762c446
gnu: Add r-ashr. 
* gnu/packages/cran.scm (r-ashr): New variable.
 2020-12-09 12:12:21 +01:00
Roel Janssen
755d16a3b0
gnu: Add r-mixsqp. 
* gnu/packages/cran.scm (r-mixsqp): New variable.
 2020-12-09 12:12:21 +01:00
Roel Janssen
deda2319f7
gnu: Add r-etrunct. 
* gnu/packages/cran.scm (r-etrunct): New variable.
 2020-12-09 12:12:21 +01:00
Roel Janssen
a7f4a8b4d0
gnu: Add r-invgamma. 
* gnu/packages/cran.scm (r-invgamma): New variable.
 2020-12-09 12:12:21 +01:00
Roel Janssen
3b399e514f
gnu: Add r-apeglm. 
* gnu/packages/bioconductor.scm (r-apeglm): New variable.
 2020-12-09 12:12:21 +01:00
Roel Janssen
a0df9b93ef
gnu: Add r-rcppnumerical. 
* gnu/packages/bioconductor.scm (r-rcppnumerical): New variable.
 2020-12-09 12:12:21 +01:00
zimoun
e9b60a2901
gnu: r-qvalue: Update to 2.22.0. 
* gnu/packages/bioconductor.scm (r-qvalue): Update to 2.22.0.
 2020-12-09 12:12:21 +01:00
zimoun
9af6fdf861
gnu: r-oligo: Update to 1.54.0. 
* gnu/packages/bioconductor.scm (r-oligo): Update to 1.54.0.
 2020-12-09 12:12:21 +01:00
zimoun
464df5ccbb
gnu: r-oligoclasses: Update to 1.52.0. 
* gnu/packages/bioconductor.scm (r-oligoclasses): Update to 1.52.0.
 2020-12-09 12:12:21 +01:00
zimoun
d72c4c98c8
gnu: r-geneplotter: Update to 1.68.0. 
* gnu/packages/bioconductor.scm (r-geneplotter): Update to 1.68.0.
 2020-12-09 12:12:20 +01:00
zimoun
c03c76344e
gnu: r-reportingtools: Update to 2.30.0. 
* gnu/packages/bioconductor.scm (r-reportingtools): Update to 2.30.0.
 2020-12-09 12:12:20 +01:00
zimoun
d1ff3604b7
gnu: r-regioner: Update to 1.22.0. 
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.22.0.
 2020-12-09 12:12:20 +01:00
zimoun
fa7578b32f
gnu: r-hpar: Update to 1.32.1. 
* gnu/packages/bioconductor.scm (r-hpar): Update to 1.32.1.
 2020-12-09 12:12:20 +01:00
zimoun
7d56302332
gnu: r-annotate: Update to 1.68.0. 
* gnu/packages/bioconductor.scm (r-annotate): Update to 1.68.0.
[propagated-inputs]: Remove 'r-rcurl', add 'r-httr'.
 2020-12-09 12:12:20 +01:00
zimoun
8e6a2c328f
gnu: r-affxparser: Update to 1.62.0. 
* gnu/packages/bioconductor.scm (r-affxparser): Update to 1.62.0.
 2020-12-09 12:12:20 +01:00
zimoun
a92219b45f
gnu: r-affycoretools: Update to 1.62.0. 
* gnu/packages/bioconductor.scm (r-affycoretools): Update to 1.62.0.
 2020-12-09 12:12:20 +01:00
zimoun
3e82f9ccaf
gnu: r-affycontam: Update to 1.48.0. 
* gnu/packages/bioconductor.scm (r-affycontam): Update to 1.48.0.
 2020-12-09 12:12:20 +01:00
zimoun
fa2d16cc27
gnu: r-affycompatible: Update to 1.50.0. 
* gnu/packages/bioconductor.scm (r-affycompatible): Update to 1.50.0.
 2020-12-09 12:12:20 +01:00
zimoun
c472549f67
gnu: r-affycomp: Update to 1.66.0. 
* gnu/packages/bioconductor.scm (r-affycomp): Update to 1.66.0.
 2020-12-09 12:12:20 +01:00
zimoun
aa311eaa74
gnu: r-biocgenerics: Update to 0.36.0. 
* gnu/packages/bioconductor.scm (r-biocgenerics): Update to 0.36.0.
 2020-12-09 12:12:20 +01:00
zimoun
70ab99096d
gnu: r-biocversion: Update to 3.12.0. 
* gnu/packages/bioconductor.scm (r-biocversion): Update to 3.12.0.
 2020-12-09 12:12:20 +01:00
zimoun
a3e2e53837
gnu: r-cummerbund: Update to 2.32.0. 
* gnu/packages/bioconductor.scm (r-cummerbund): Update to 2.32.0.
 2020-12-09 12:12:20 +01:00
zimoun
5ef637ddc7
gnu: r-coverageview: Update to 1.28.0. 
* gnu/packages/bioconductor.scm (r-coverageview): Update to 1.28.0.
 2020-12-09 12:12:20 +01:00
zimoun
25f4e6520e
gnu: r-ideoviz: Update to 1.26.0. 
* gnu/packages/bioconductor.scm (r-ideoviz): Update to 1.26.0.
 2020-12-09 12:12:20 +01:00
Efraim Flashner
533935ccf7
services: science.scm: Add missing copyright headers. 
This module was always supposed to have the GPL3 header in place.
Follow-up to 8f19e63f76.

* gnu/services/science.scm: Add Copyright headers.
 2020-12-09 12:55:02 +02:00
Guillaume Le Vaillant
53c480006b
gnu: monero-gui: Update to 0.17.1.6. 
* gnu/packages/finance.scm (monero-gui): Update to 0.17.1.6.
 2020-12-09 11:34:25 +01:00
Guillaume Le Vaillant
5560bd7b6b
gnu: monero: Update to 0.17.1.6. 
* gnu/packages/finance.scm (monero): Update to 0.17.1.6.
 2020-12-09 11:34:25 +01:00
elaexuotee@wilsonb.com
8e2aad26ae
gnu: Add lemonbar-xft. 
* gnu/packages/wm.scm (lemonbar-xft): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-09 09:10:33 +00:00
Ryan Prior
9941036559
gnu: Add go-github-com-aws-sdk. 
* gnu/packages/golang.scm (go-github-com-aws-sdk): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-12-09 09:45:35 +02:00
Ryan Prior
016501aec6
gnu: Add go-github-com-jmespath-go-jmespath. 
* gnu/packages/golang.scm (go-github-com-jmespath-go-jmespath): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-12-09 09:45:35 +02:00
Ryan Prior
f7c2896e52
gnu: Add go-github-com-go-sql-driver-mysql. 
* gnu/packages/golang.scm (go-github-com-go-sql-driver-mysql): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2020-12-09 09:45:31 +02:00
Leo Famulari
2b0185a74b
gnu: linux-libre 4.14: Update to 4.14.211. 
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.211.
(linux-libre-4.14-pristine-source): Update hash.
 2020-12-09 01:08:15 -05:00
Leo Famulari
a2eae5ec4a
gnu: linux-libre 4.19: Update to 4.19.162. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.162.
(linux-libre-4.19-pristine-source): Update hash.
 2020-12-09 01:08:15 -05:00
Leo Famulari
66b1b55148
gnu: linux-libre 5.4: Update to 5.4.82. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.82.
(linux-libre-5.4-pristine-source): Update hash.
 2020-12-09 01:08:14 -05:00
Leo Famulari
54f777ca4e
gnu: linux-libre: Update to 5.9.13. 
* gnu/packages/linux.scm (linux-libre-5.9-version): Update to 5.9.13.
(linux-libre-5.9-pristine-source): Update hash.
 2020-12-09 01:08:09 -05:00
Leo Famulari
02b21f35cc
gnu: OpenSSL: Update to 1.1.1i [fixes CVE-2020-1971]. 
* gnu/packages/tls.scm (openssl)[replacement]: Update replacement to 1.1.1i
(openssl-1.1.1g): Replace with ...
(openssl-1.1.1i): ... new variable.
 2020-12-08 19:48:09 -05:00
Ludovic Courtès
456421fc0f
gnu: guix: Update to 799f066. 
* gnu/packages/package-management.scm (guix): Update to 799f066.
 2020-12-08 23:38:04 +01:00
Ludovic Courtès
4a98735297
gnu: autotools: Add version 2.70. 
* gnu/packages/autotools.scm (autoconf): Rename to...
(autoconf-2.69): ... this.
(autoconf): Define as an alias for AUTOCONF-2.69.
(autoconf-2.70): New variable.
 2020-12-08 22:28:00 +01:00
Vincent Legoll
20e5658c04
gnu: ocaml-menhir: Update to 20200211. 
* gnu/packages/ocaml.scm (ocaml-menhir): Update to 20200211.
[build-system]: Switch from gnu to dune.
[arguments]: Remove phases and make-flags.
[native-inputs]: Remove field.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-08 20:18:11 +00:00
Efraim Flashner
2d1a621b8d
gnu: mruby: Update to 2.1.2. 
* gnu/packages/ruby.scm (mruby): Update to 2.1.2.
 2020-12-08 22:09:30 +02:00
L p R n d n
8a55a3994c
gnu: Add mypaint. 
* gnu/packages/image.scm (mypaint): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2020-12-08 20:06:38 +00:00
Christopher Baines
c9c3569ad9
gnu: libmypaint: Update to 1.6.1. 
Needed by mypaint@2.0.1.

* gnu/packages/gimp.scm (libmypaint): Update to 1.6.1.
 2020-12-08 20:06:34 +00:00
Leo Famulari
e1d3b07ffc
gnu: isync: Use OpenSSL 1.1. 
* gnu/packages/mail.scm (isync)[inputs]: Replace openssl-1.0 with openssl.
 2020-12-08 13:25:27 -05:00
Efraim Flashner
adbb62f16e
gnu: fcitx5-material-color-theme: Add source file-name. 
* gnu/packages/fcitx5.scm (fcitx5-material-color-theme)[source]: Add
file-name field.
 2020-12-08 18:14:31 +02:00
Zhu Zihao
af34f757ce
gnu: Add fcitx5-material-color-theme. 
* gnu/packages/fcitx5.scm (fcitx5-material-color-theme): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2020-12-08 20:31:47 +08:00
Zhu Zihao
ac1c7530d8
gnu: Add fcitx5-configtool. 
* gnu/packages/fcitx5.scm (fcitx5-configtool): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2020-12-08 20:31:47 +08:00
Zhu Zihao
9a23698ecd
gnu: Add fcitx5-chinese-addons. 
* gnu/packages/fcitx5.scm (fcitx5-chinese-addons): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2020-12-08 20:31:47 +08:00