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Author SHA1 Message Date
Ludovic Courtès
0736643424 gnu: transmission: Move '.desktop' file to the "gui" output. 
Fixes <http://bugs.gnu.org/23066>.
Reported by Danny Milosavljevic <dannym@scratchpost.org>.

* gnu/packages/bittorrent.scm (transmission)[arguments]: In 'move-gui',
move 'share/applications' to the 'gui' output.
 2016-04-02 22:40:18 +02:00
Efraim Flashner
451c1436a3 gnu: mc: Update to 4.8.16. 
* gnu/packages/mc.scm (mc): Update to 4.8.16.
[source]: Remove patch.
* gnu/packages/patches/mc-fix-ncurses-build.patch: Remove.
* gnu-system.am (dist_patch_DATA): Remove it.
 2016-04-02 23:39:32 +03:00
Efraim Flashner
57818b6e3c gnu: gnucash: Update to 2.6.12. 
* gnu/packages/gnucash.scm (gnucash): Update to 2.6.12.
[home-page]: Update to new homepage.
 2016-04-02 22:10:29 +03:00
Ben Woodcroft
a754eaf16d gnu: ruby-2.1: Update to 2.1.10. 
* gnu/packages/ruby.scm (ruby-2.1): Update to 2.1.10.
 2016-04-02 09:16:17 +10:00
Efraim Flashner
f04433773d gnu: glpk: Update to 4.60. 
* gnu/packages/maths.scm (glpk): Update to 4.60.
 2016-04-01 16:52:54 +03:00
Ludovic Courtès
915363a3e2 gnu: wicd: Add template for WPA2-TTLS. 
* gnu/packages/patches/wicd-wpa2-ttls.patch: New file.
* gnu/packages/wicd.scm (wicd)[source]: Add it.
* gnu-system.am (dist_patch_DATA): Add it.
 2016-04-01 13:59:58 +02:00
Ludovic Courtès
f5480572d0 gnu: wicd: Update to 1.7.4. 
* gnu/packages/wicd.scm (wicd): Update to 1.7.4.
[source]: Remove 'wicd-template-instantiation.patch'.
* gnu/packages/patches/wicd-template-instantiation.patch: Remove.
* gnu-system.am (dist_patch_DATA): Remove it.
 2016-04-01 13:59:58 +02:00
Efraim Flashner
dbeaf8f203 gnu: postgresql: Update to 9.5.2. [fixes CVE-2016-2193, CVE-2016-3065] 
* gnu/packages/databases.scm (postgresql): Update to 9.5.2.
 2016-04-01 13:57:21 +03:00
Ricardo Wurmus
6499b70ebf gnu: Add r-ztable. 
* gnu/packages/statistics.scm (r-ztable): New variable.
 2016-04-01 11:46:19 +02:00
Jelle Licht
ec67294611 gnu: Add jq. 
* gnu/packages/web.scm: (jq): New variable.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2016-04-01 11:56:30 +03:00
Jelle Licht
2d8cf0b3e7 gnu: Add oniguruma. 
* gnu/packages/textutils.scm (oniguruma): New variable.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2016-04-01 11:38:06 +03:00
alírio eyng
52af45adeb gnu: fontforge: Build fonts bit-reproducibly. 
* gnu/packages/fontutils.scm (fontforge)[source](snippet): Modify
tottf.c.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2016-04-01 00:05:42 +02:00
Jan Nieuwenhuizen
2cdeecbe4d gnu: move miscfiles into gnu-doc.scm 
* gnu/packages/miscfiles.scm: Remove file.
* gnu-sytem.am: Remove it.
* gnu/packages/gnu-doc.scm (miscfiles): Move here.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-04-01 00:05:42 +02:00
Jan Nieuwenhuizen
ec0730cb67 gnu: Add gnu-standards. 
* gnu/packages/gnu-doc.scm: New file.
* gnu-system.am: Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-04-01 00:05:42 +02:00
alírio eyng
47268eec13 gnu: font-gnu-freefont-ttf: Update to 20120503 and build from source. 
* gnu/packages/fonts.scm (font-gnu-freefont-ttf): Update to 20120503.
[arguments]: Build from source.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-04-01 00:05:42 +02:00
Efraim Flashner
b5afe6f031 gnu: gnupg-2.0: Update to 2.0.30. 
* gnu/packages/gnupg.scm (gnupg-2.0): Update to 2.0.30.
 2016-03-31 21:14:25 +03:00
Taylan Ulrich Bayırlı/Kammer
d0457553d5 gnu: Add nmap. 
* gnu/packages/admin.scm (nmap): New variable.

Co-authored-by: Leo Famulari <leo@famulari.name>
 2016-03-31 02:08:56 -04:00
Chris Marusich
12af303f47 gnu: Add python2-s3cmd. 
* gnu/packages/python.scm (python2-s3cmd): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-03-30 23:39:47 +02:00
Chris Marusich
daeeea7154 gnu: Add python-magic. 
* gnu/packages/python.scm (python-magic, python2-magic): New variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-03-30 23:39:47 +02:00
Kei Yamashita
21d1811301 gnu: Add MilkyTracker. 
* gnu/packages/music.scm (milkytracker): New variable.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2016-03-30 23:45:44 +03:00
Efraim Flashner
ddb8312911 gnu: python2-pbcore: Update to 1.2.8. 
* gnu/packages/bioinformatics.scm (python2-pbcore): Update to 1.2.8.
[native-inputs]: Add python2-docutils, python2-nose, python2-sphinx.
 2016-03-30 22:45:35 +03:00
rain1
96e9f097ee gnu: linux-libre: Avoid introducing timestamps into the build. 
* gnu/packages/linux.scm (linux-libre)[build-phase]: Set the
KCONFIG_NOTIMESTAMP and KBUILD_BUILD_TIMESTAMP environment variables to
avoid introducing timestamps into the build outputs.
 2016-03-30 15:22:04 -04:00
Efraim Flashner
8caf80fcf4 gnu: libcue: Fix source url. 
* gnu/packages/cdrom.scm (libcue)[source]: Fix url.
[home-page]: Project has moved to Github.
 2016-03-30 13:39:42 +03:00
Roel Janssen
fa9f0e6c25 gnu: r-devtools: Update to 1.10.0. 
* gnu/packages/statistics.scm (r-devtools): Update to 1.10.0.
   (r-devtools)[propagated-inputs]: Add r-withr.
 2016-03-30 12:02:40 +02:00
Roel Janssen
a080e50c15 gnu: Add r-withr. 
* gnu/packages/statistics.scm (r-withr): New variable.
 2016-03-30 12:02:28 +02:00
Ricardo Wurmus
f315f4fcab gnu: r-genomation: Update to 1.2.2. 
* gnu/packages/bioinformatics.scm (r-genomation): Update to 1.2.2.
 2016-03-30 11:59:16 +02:00
Ricardo Wurmus
571f0b63d5 gnu: r-genomicfeatures: Update to 1.22.13. 
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to
  1.22.13.
 2016-03-30 11:59:16 +02:00
Ricardo Wurmus
ffaf72ad96 gnu: r-rtracklayer: Update to 1.30.4. 
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.30.4.
 2016-03-30 11:59:15 +02:00
Ricardo Wurmus
ac2d8b0fb8 gnu: r-genomicalignments: Update to 1.6.3. 
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to
  1.6.3.
 2016-03-30 11:59:15 +02:00
Ricardo Wurmus
7eade1c5f9 gnu: r-summarizedexperiment: Update to 1.0.2. 
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to
  1.0.2.
 2016-03-30 11:59:15 +02:00
Ricardo Wurmus
53fd0f5e1d gnu: r-biostrings: Update to 2.38.4. 
* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.38.4.
 2016-03-30 11:59:15 +02:00
Ricardo Wurmus
5fe3115415 gnu: r-genomicranges: Update to 1.22.4. 
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.22.4.
 2016-03-30 11:59:15 +02:00
Ricardo Wurmus
9cc22d28d8 gnu: r-genomeinfodb: Update to 1.6.3. 
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.6.3.
 2016-03-30 11:59:15 +02:00
Efraim Flashner
48fa9312ab gnu: libpaper: Update source url. 
Reported by shanemikel_ on irc.

* gnu/packages/ghostscript.scm (libpaper)[source]: Update source url to
download from Fedora.
[home-page]: Use https.
 2016-03-30 10:49:03 +03:00
Ludovic Courtès
61cdad351d gnu: guix: Ignore the user's 'GUILE_LOAD_COMPILED_PATH'. 
Reported by <rain1@openmailbox.org>.

* gnu/packages/package-management.scm (guix-0.10.0)[arguments]: Use '=
instead of 'prefix in call to 'wrap-program'.
 2016-03-29 22:13:20 +02:00
Rene Saavedra
3a9a4c51e8 gnu: Add libzapojit. 
* gnu/packages/gnome.scm (libzapojit): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2016-03-29 22:13:20 +02:00
Leo Famulari
b7fbf297c8 gnu: khal: Disable failing tests. 
* gnu/packages/calendar.scm (khal)[arguments]: Disable failing tests in
'disable-tests' phase.
 2016-03-29 15:35:00 -04:00
Efraim Flashner
d1ceedf8b1 gnu: gst-plugins-good: Update to 1.8.0. 
* gnu/packages/gstreamer.scm (gst-plugins-good): Update to 1.8.0.
[home-page]: Use https.
[arguments]: Disable tests that fail non-deterministically.
 2016-03-29 21:34:52 +03:00
Efraim Flashner
40dad30c5e gnu: gst-plugins-ugly: Update to 1.8.0. 
* gnu/packages/gstreamer.scm (gst-plugins-ugly): Update to 1.8.0.
[home-page]: Use https.
 2016-03-29 21:34:52 +03:00
Efraim Flashner
d2b5dec5b0 gnu: python-gst: Update to 1.8.0. 
* gnu/packages/gstreamer.scm (python-gst, python2-gst): Update to 1.8.0.
[home-page]: Use https.
 2016-03-29 21:34:52 +03:00
Efraim Flashner
70e863e53e gnu: gst-plugins-base: Update to 1.8.0. 
* gnu/packages/gstreamer.scm (gst-plugins-base): Update to 1.8.0.
[home-page]: Use https.
 2016-03-29 21:34:52 +03:00
Efraim Flashner
ab0a56201d gnu: gstreamer: Update to 1.8.0. 
* gnu/packages/gstreamer.scm (gstreamer): Update to 1.8.0.
 2016-03-29 21:34:52 +03:00
Ludovic Courtès
50ebd439c7 Merge branch 'version-0.10.0' 2016-03-29 16:13:41 +02:00
Ludovic Courtès
f98b48dc51 gnu: guix: Update development snapshot. 
* gnu/packages/package-management.scm (guix-devel): Update to 7611393.
(guix): Set to GUIX-DEVEL.
 2016-03-29 09:35:22 +02:00
宋文武
67c2fc01a0 gnu: Add uwsgi. 
* gnu/packages/web.scm (uwsgi): New variable.
 2016-03-29 11:50:24 +08:00
宋文武
7ad1fee52e gnu: Add cgit. 
* gnu/packages/version-control.scm (cgit): New variable.
 2016-03-29 11:50:24 +08:00
Ludovic Courtès
7611393547 gnu: guix: Default to 0.10.0. 
This updates 58f0aae.

* gnu/packages/package-management.scm (guix): Set to GUIX-0.10.0.
 2016-03-28 23:54:48 +02:00
Ludovic Courtès
58f0aae5cb gnu: guix: Update to 0.10.0. 
* gnu/packages/package-management.scm (guix-0.8.3): Rename to...
(guix-0.10.0): ... this.  Adjust users.
(guix): Set to GUIX-0.10.0.
 2016-03-28 23:38:00 +02:00
Ricardo Wurmus
e0b90dbf65 gnu: qtractor: Update to 0.7.5. 
* gnu/packages/music.scm (qtractor): Update to 0.7.5.
 2016-03-28 09:52:16 +02:00
Leo Famulari
36c2c8c826 gnu: beets: Run tests with python-nose. 
* gnu/packages/music.scm (nose)[native-inputs]: Add python-nose.
[arguments]: Replace 'check' and use python-nose.
 2016-03-27 18:24:19 -04:00
Leo Famulari
d3e3468fb8 gnu: python-pyechonest: Clean up description. 
* gnu/packages/music.scm (pyechonest)[description]: Remove "open source" from
the description.
 2016-03-26 17:25:13 -04:00
Efraim Flashner
e12f047f75 gnu: pspp: Update to 0.10.0. 
* gnu/packages/maths.scm (pspp): Update to 0.10.0.
[inputs]: Switch gtk+-2 to gtk+, gtksourceview-2 to gtksourceview.
 2016-03-26 22:39:29 +03:00
David Thompson
8d50632373 gnu: sdl2-ttf: Update to 2.0.14. 
* gnu/packages/sdl.scm (sdl2-ttf): Update to 2.0.14 and remove bundled
  libraries from source tarball.
 2016-03-26 13:35:06 -04:00
David Thompson
64ee72e124 gnu: sdl2-image: Update to 2.0.1. 
* gnu/packages/sdl.scm (sdl2-image): Update to 2.0.1.
 2016-03-26 13:35:06 -04:00
David Thompson
efd75ade17 gnu: sdl2-mixer: Update to 2.0.1. 
* gnu/packages/sdl.scm (sdl2-mixer): Update to 2.0.1 and remove bundled
  libraries in source tarball.
 2016-03-26 13:35:06 -04:00
David Thompson
a313e0850c gnu: sdl-mixer: Add ModPlug support. 
* gnu/packages/sdl.scm (sdl-mixer)[inputs]: Add libmodplug.
 2016-03-26 13:35:06 -04:00
David Thompson
4c0e59d1a8 gnu: sdl2: Update to 2.0.4. 
* gnu/packages/sdl.scm (sdl2): Update to 2.0.4.
 2016-03-26 13:35:06 -04:00
David Thompson
7c776ddcc0 gnu: crossguid: Set explicit file name for source checkout. 
* gnu/packages/kodi.scm (crossguid)[source]: Set explicit file-name to
  satisfy linter.
 2016-03-26 09:52:28 -04:00
Mark H Weaver
c7762233fb Revert "gnu: expat: Replace with 2.1.1 [fixes CVE-2015-1283]." 
This reverts commit 6458876597.
 2016-03-25 17:20:57 -04:00
Leo Famulari
15bdd91cc4 gnu: diffoscope: Update to 51. 
* gnu/packages/package-management.scm (diffoscope): Update to 51.
 2016-03-25 17:17:06 -04:00
Leo Famulari
54c30ebcb1 gnu: python-atomicwrites: Update to 1.0.0. 
* gnu/packages/python.scm (python-atomicwrites, python2-atomicwrites):
Update to 1.0.0.
 2016-03-25 17:08:47 -04:00
Mark H Weaver
6458876597 gnu: expat: Replace with 2.1.1 [fixes CVE-2015-1283]. 
* gnu/packages/xml.scm (expat)[replacement]: New field.
(expat-2.1.1): New variable.
 2016-03-25 17:04:28 -04:00
Ludovic Courtès
a2da8c173a gnu: guix: Update development snapshot to dd21308. 
* gnu/packages/package-management.scm (guix-devel): Update to dd21308.
 2016-03-25 10:52:25 +01:00
Ricardo Wurmus
7affb2c1ac gnu: lilypond: Fix check for fontforge version. 
* gnu/packages/music.scm (lilypond)[arguments]: Patch configure script
  to find actual fontforge version.
 2016-03-25 10:03:11 +01:00
John Darrington
dd21308225 gnu: postgresql: Substitute hard coded "/bin/sh". 
* gnu/packages/databses.scm (postgresql): substitute /bin/sh
with location of bash binary.
 2016-03-25 08:04:56 +01:00
Leo Famulari
43a58615bf gnu: htop: Update to 2.0.1. 
* gnu/packages/admin.scm (htop): Update to 2.0.1.
 2016-03-24 23:06:09 -04:00
Ludovic Courtès
68abb9b04c install: Use 'info-reader' instead of Texinfo 4. 
* gnu/system/install.scm (installation-os)[packages]: Remove TEXINFO-4
since %BASE-PACKAGES already provides the Info reader.
(log-to-info): Use INFO-READER instead of TEXINFO-4.
 2016-03-24 22:47:15 +01:00
Ludovic Courtès
02683c3331 system: Use 'info-reader' instead of Texinfo to avoid dragging Perl. 
* gnu/system.scm (%base-packages): Use INFO-READER instead of TEXINFO.
 2016-03-24 22:47:15 +01:00
Ludovic Courtès
7feebd33ae gnu: Add 'info-reader'. 
* gnu/packages/texinfo.scm (info-reader): New variable.
 2016-03-24 22:47:15 +01:00
Ludovic Courtès
0feefb530f install: Remove cgroup and elogind file systems. 
* gnu/system/install.scm (installation-os): Explicitly list three file
systems instead of using %BASE-FILE-SYSTEMS.
 2016-03-24 22:47:15 +01:00
Ludovic Courtès
2fa909b27b activation: Copy account skeletons silently. 
* gnu/build/activation.scm (copy-account-skeletons): Pass #:log to
'copy-recursively'.
 2016-03-24 22:47:15 +01:00
Ludovic Courtès
ee03b75dfb install: Add /tmp as a tmpfs. 
Fixes <http://bugs.gnu.org/23056>.
Reported by Michael Downey <shaggy814@yandex.com>
and Kei <kei@openmailbox.org>.

* gnu/system/install.scm (installation-os)[file-systems]: Add "/tmp".
 2016-03-24 22:47:15 +01:00
Ludovic Courtès
cc7234aede services: nscd: Make respawnable. 
* gnu/services/base.scm (nscd-shepherd-service): Remove 'respawn?' field.
 2016-03-24 22:47:15 +01:00
Leo Famulari
229b36617a gnu: python-llfuse-0.41: Update to 0.41.1. 
* gnu/packages/python.scm (python-llfuse-0.41): Update to 0.41.1.
 2016-03-24 15:30:51 -04:00
Leo Famulari
6fc5c11b81 gnu: Add borg. 
* gnu/packages/backup.scm (borg): New variable.
 2016-03-24 15:30:51 -04:00
Leo Famulari
5a39b07f8a gnu: attic: Specify dependency on python-llfuse-0.41. 
* gnu/packages/backup.scm (attic)[inputs]: Specify dependency on
python-llfuse-0.41.
 2016-03-24 15:30:51 -04:00
Leo Famulari
cd0569c498 gnu: python-llfuse: Update to 1.0, keep 0.41 variant. 
* gnu/packages/python.scm (python-llfuse, python2-llfuse): Update to 1.0.
(python-llfuse)[properties]: New field.
[license]: Remove 'expat'.
(python2-llfuse): Use 'strip-python2-variant'.
[propagated-inputs]: Add python2-contextlib2.
(python-llfuse-0.41): New variable.
 2016-03-24 15:30:51 -04:00
Leo Famulari
bd74be7b8c gnu: python-msgpack: Use 'python2-variant'. 
* gnu/packages/python.scm (python-msgpack)[native-inputs]: Remove field.
[properties]: New field.
(python2-msgpack): Use 'strip-python2-variant'.
[native-inputs]: Add python2-setuptools.
 2016-03-24 15:30:51 -04:00
Leo Famulari
ae831df428 gnu: python-msgpack: Update to 0.4.7. 
* gnu/packages/python.scm (python-msgpack, python2-msgpack): Update to 0.4.7.
[source]: Use pypi-uri.
 2016-03-24 15:30:51 -04:00
Alex Kost
453cdf8606 system: Do not create "site-start.el". 
After commits 004ea62 and 092dd65, Emacs can find packages in a system
profile, so it autoloads guix code without additional hacks, which can
be removed now.

* gnu/system.scm (emacs-site-file, emacs-site-directory): Remove.
(operating-system-etc-service): Adjust accordingly.
(operating-system-environment-variables): Remove EMACSLOADPATH.
 2016-03-24 18:49:59 +03:00
Ricardo Wurmus
1d216b6ec9 gnu: Remove "r-repository" property. 
* gnu/packages/bioinformatics.scm (r-biocgenerics, r-s4vectors,
r-iranges, r-genomeinfodb, r-xvector, r-genomicranges)[properties]:
Remove "r-repository" property.
 2016-03-24 16:18:01 +01:00
Andreas Enge
08595262db gnu: pari-gp: Syntactic changes. 
* gnu/packages/algebra.scm (pari-gp)[arguments]: Use modify-phases syntax.
 2016-03-24 14:44:08 +01:00
Ludovic Courtès
f2ab925028 services: xorg: Fix ~/.xsession handling. 
Fixes a regression introduced in c510cbb4ec.

* gnu/services/xorg.scm (xinitrc)[builder]: Add missing 'apply' when
XSESSION-FILE exists.
 2016-03-24 11:01:07 +01:00
Efraim Flashner
473dbe9b19 gnu: modem-manager: Update to 1.4.14. 
* gnu/packages/freedesktop.scm (modem-manager): Update to 1.4.14.
 2016-03-24 08:37:07 +02:00
Mark H Weaver
385b1be8d0 gnu: webkitgtk: Update to 2.12.0. 
* gnu/packages/webkit.scm (webkitgtk): Update to 2.12.0.
 2016-03-23 18:47:41 -04:00
Ludovic Courtès
ee37e1e501 gnu: shepherd: Update to 0.3.1. 
* gnu/packages/admin.scm (shepherd): Update to 0.3.1.
 2016-03-23 23:43:50 +01:00
Nils Gillmann
7b150a24fe gnu: libressl: Update to 2.3.3. 
* gnu/packages/tls.scm (libressl): Update to 2.3.3.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-03-23 13:39:17 -04:00
Ricardo Wurmus
c1f73569be gnu: Add AIDE. 
* gnu/packages/admin.scm (aide): New variable.
 2016-03-23 08:08:02 +01:00
Leo Famulari
6139fed563 gnu: icecast: Update to 2.4.3 [fixes CVE-2015-3026]. 
* gnu/packages/xiph.scm (icecast): Update to 2.4.3.
 2016-03-22 23:13:58 -04:00
Ludovic Courtès
9b1cee97a5 services: postgresql: Use syslog. 
Fixes <http://bugs.gnu.org/23064>.
Reported by Danny Milosavljevic <dannym@scratchpost.org>.

* gnu/services/databases.scm (%default-postgres-config): Add
'log_destination' line.
(postgresql-shepherd-service): Add requirement on 'syslogd'.
 2016-03-23 00:23:12 +01:00
Ludovic Courtès
d038b674cf doc: Add "lightweight desktop" OS config example. 
* gnu/system/examples/desktop.tmpl (packages): Remove XFCE and
RATPOISON.
(services): Add 'gnome-desktop-service' and 'xfce-desktop-service'.
* gnu/system/examples/lightweight-desktop.tmpl: New file.
* Makefile.am (EXAMPLES): Add it.
* doc.am (OS_CONFIG_EXAMPLES_TEXI): Add
doc/os-config-lightweight-desktop.texi.
* gnu/system/install.scm (/etc/configuration-files)[directory]: Add
lightweight-desktop.tmpl.
 2016-03-23 00:23:12 +01:00
Mark H Weaver
58cc369f32 gnu: webkitgtk-2.4: Update to 2.4.10 [fixes many security flaws]. 
Fixes CVE-2014-1748, CVE-2015-1071, CVE-2015-1076, CVE-2015-1081,
CVE-2015-1083, CVE-2015-1120, CVE-2015-1122, CVE-2015-1127, CVE-2015-1153,
CVE-2015-1155, CVE-2015-3658, CVE-2015-3659, CVE-2015-3727, CVE-2015-3731,
CVE-2015-3741, CVE-2015-3743, CVE-2015-3745, CVE-2015-3747, CVE-2015-3748,
CVE-2015-3749, CVE-2015-3752, CVE-2015-5788, CVE-2015-5794, CVE-2015-5801,
CVE-2015-5809, CVE-2015-5822, and CVE-2015-5928.

* gnu/packages/patches/webkitgtk-2.4-sql-init-string.patch: Delete file.
* gnu-system.am (dist_patch_DATA): Remove it.
* gnu/packages/webkit.scm (webkitgtk-2.4): Update to 2.4.10.
[source]: Remove patch.
 2016-03-22 07:38:22 -04:00
Mark H Weaver
1020fb6ac7 gnu: linux-libre-4.1: Update to 4.1.20. 
* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.20.
 2016-03-21 22:53:55 -04:00
Ludovic Courtès
cd6cc144e0 Merge branch 'security-updates' 2016-03-22 00:14:03 +01:00
Ricardo Wurmus
ffc13e753b gnu: chicken: Build with GCC 4.8. 
* gnu/packages/scheme.scm (chicken)[native-inputs]: Add GCC 4.8.
 2016-03-21 22:08:24 +01:00
Ricardo Wurmus
416a5a9a51 gnu: chicken: Disable port tests. 
* gnu/packages/scheme.scm (chicken)[arguments]: Do not run port tests.
 2016-03-21 22:08:24 +01:00
Ricardo Wurmus
acb3807079 gnu: chicken: Use "modify-phases" syntax. 
* gnu/packages/scheme.scm (chicken)[arguments]: Use "modify-phases"
  syntax.
 2016-03-21 22:08:24 +01:00
Ricardo Wurmus
d0d9411015 gnu: chicken: Update to 4.10.0. 
* gnu/packages/scheme.scm (chicken): Update to 4.10.0.
 2016-03-21 22:08:23 +01:00
Leo Famulari
b0bb013698 gnu: mutt: Enable header caching. 
* gnu/packages/mail.scm (mutt)[inputs]: Add gdbm.
[arguments]: Pass --enable-hcache to #:configure-flags.
 2016-03-21 16:48:39 -04:00
Efraim Flashner
506379664a gnu: gmtp: Update to 1.3.10. 
* gnu/packages/libusb.scm (gmtp): Update to 1.3.10.
 2016-03-21 20:52:26 +02:00
Ricardo Wurmus
c84ceace14 gnu: artanis: Update to 0.1.2. 
* gnu/packages/guile.scm (artanis): Update to 0.1.2.
[arguments]: Set DESTDIR.
 2016-03-21 17:44:39 +01:00
Ricardo Wurmus
71cafa0472 gnu: Add r-doparallel. 
* gnu/packages/statistics.scm (r-doparallel): New variable.
 2016-03-21 15:54:05 +01:00
Ricardo Wurmus
b2cdb0271b gnu: Add r-foreach. 
* gnu/packages/statistics.scm (r-foreach): New variable.
 2016-03-21 15:54:05 +01:00
Ricardo Wurmus
7a6f5f0323 gnu: Add r-codetools. 
* gnu/packages/statistics.scm (r-codetools): New variable.
 2016-03-21 15:54:05 +01:00
Ricardo Wurmus
264df1a49d gnu: Add r-iterators. 
* gnu/packages/statistics.scm (r-iterators): New variable.
 2016-03-21 15:54:05 +01:00
Ricardo Wurmus
9128db2178 gnu: Add ustr. 
* gnu/packages/textutils.scm (ustr): New variable.
 2016-03-21 15:53:40 +01:00
Efraim Flashner
ce16d1dc94 gnu: ddrescue: Update to 1.21. 
* gnu/packages/disk.scm (ddrescue): Update to 1.21.
 2016-03-21 15:22:31 +02:00
Ludovic Courtès
c035145968 gnu: udisks: Enforce non-reference of the "doc" output. 
* gnu/packages/freedesktop.scm (udisks)[arguments]: Add
  #:disallowed-references.
 2016-03-20 22:52:33 +01:00
Ludovic Courtès
e71ef7adae system: Make sure fonts are searched for in the system profile. 
This fixes a bug whereby fonts in /run/current-system/profile would be
invisible to Fontconfig.

* gnu/packages/fontutils.scm (fontconfig): Add comment about system
profile not being searched.
* gnu/system/shadow.scm (default-skeletons)[fonts.conf-content,
fonts.conf]: New variable.
Add FONTS.CONF to the skeletons.
 2016-03-20 15:27:44 +01:00
Ludovic Courtès
0bd3597bbe gnu: gnome: Add dependency on font-abattis-cantarell. 
* gnu/packages/gnome.scm (gnome)[propagated-inputs]: Add
FONT-CANTARELL.
 2016-03-20 15:05:12 +01:00
Ludovic Courtès
4e8b7502e3 system: Allow account skeletons to be directories. 
* gnu/system/shadow.scm (skeleton-directory): Use 'copy-recursively'
instead of 'copy-file'.
* gnu/build/activation.scm (copy-account-skeletons): Likewise.
 2016-03-20 15:02:38 +01:00
Ludovic Courtès
71be99b8b6 gnu: Add font-abattis-cantarell. 
* gnu/packages/fonts.scm (font-cantarell): New variable.
 2016-03-20 01:07:37 +01:00
Ludovic Courtès
329a702634 gnu: fontforge: Make builds bit-reproducible. 
* gnu/packages/fontutils.scm (fontforge)[source](snippet, modules): New
fields.
 2016-03-19 15:57:07 +01:00
alírio eyng
56586557dd gnu: fontforge: Update to 20150824. 
* gnu/packages/fontutils.scm (fontforge): Update to 20150824.
[inputs]: Add libltdl, libxft, python.
[native-inputs]: New field.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-03-19 15:36:26 +01:00
Ludovic Courtès
7c49ab5b1c gnu: kodi: Remove @acronym from description. 
This works around <http://bugs.gnu.org/21772>.

* gnu/packages/kodi.scm (crossguid): Remove @acronym.
 2016-03-19 14:41:56 +01:00
Ludovic Courtès
5697fdc366 gnu: r-dnacopy: Fix home page URL. 
* gnu/packages/bioinformatics.scm (r-dnacopy)[home-page]: Add missing
URI scheme.
 2016-03-18 23:00:04 +01:00
Ludovic Courtès
6cbc8d5766 gnu: gnome: Disable hardware acceleration check via 'gnome.desktop'. 
* gnu/packages/gnome.scm (gnome-session)[arguments]: Add
'disable-hardware-acceleration-check' phase.
 2016-03-18 19:42:00 +01:00
Ludovic Courtès
c510cbb4ec services: xorg: Accept session commands with arguments. 
Before that, a session command with several items, such as
'gnome-session --disable-acceleration-check', would trigger the fallback
session.

* gnu/services/xorg.scm (xinitrc)[builder]: Accept command lines with
more than one arguments.
 2016-03-18 19:42:00 +01:00
Ludovic Courtès
a0d7baaf48 gnu: gnome-session: Make sure 'gsettings' is found. 
* gnu/packages/gnome.scm (gnome-session)[arguments]: Add
'wrap-gnome-session' phase.
 2016-03-18 19:42:00 +01:00
Leo Famulari
3bf429af2f gnu: Add beets. 
* gnu/packages/music.scm (beets): New variable.
 2016-03-18 14:27:16 -04:00
Leo Famulari
064503aaa2 gnu: Add python-rarfile. 
* gnu/packages/python.scm (python-rarfile, python2-rarfile): New
variables.
* gnu/packages/patches/python-rarfile-fix-tests.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
 2016-03-18 14:27:16 -04:00
Leo Famulari
13edb0e5c3 gnu: Add python2-unicodecsv. 
* gnu/packages/python.scm (python2-unicodecsv): New variable.
 2016-03-18 14:27:16 -04:00
Leo Famulari
25a7db0ad3 gnu: Add python-jellyfish. 
* gnu/packages/python.scm (python-jellyfish, python2-jellyfish): New variables.
 2016-03-18 14:27:16 -04:00
Leo Famulari
efe0b14369 gnu: Add python-mpd2. 
* gnu/packages/mpd.scm (python-mpd2, python2-mpd2): New variables.
 2016-03-18 14:27:16 -04:00
Leo Famulari
76b9488534 gnu: Add python2-pathlib. 
* gnu/packages/python.scm (python-pathlib, python2-pathlib): New variables.
 2016-03-18 14:27:16 -04:00
Leo Famulari
0efde7d6d6 gnu: Add python-responses. 
* gnu/packages/python.scm (python-responses, python2-responses): New variables.
 2016-03-18 14:27:16 -04:00
Leo Famulari
603d665bc3 gnu: Add python-cookies. 
* gnu/packages/python.scm (python-cookies, python2-cookies): New variable.
 2016-03-18 14:27:16 -04:00
Leo Famulari
acd7351ff6 gnu: Add python-pylast. 
* gnu/packages/music.scm (python-pylast, python2-pylast): New variables.
 2016-03-18 14:27:16 -04:00
Leo Famulari
e8fee6486f gnu: Add python-pyechonest. 
* gnu/packages/music.scm (python-pyechonest, python2-pyechonest): New variables.
 2016-03-18 14:27:16 -04:00
Leo Famulari
f3b3d78fbc gnu: Add python-flask. 
* gnu/packages/python.scm (python-flask, python2-flask): New variables.
 2016-03-18 14:27:16 -04:00
Leo Famulari
8975de8821 gnu: Add python-musicbrainzngs. 
* gnu/packages/music.scm (python-musicbrainzngs, python2-musicbrainzngs): New
variables.
 2016-03-18 14:27:16 -04:00
Leo Famulari
cedac813a5 gnu: Add python-munkres. 
* gnu/packages/python.scm (python-munkres, python2-munkres): New variables.
 2016-03-18 14:27:16 -04:00
Leo Famulari
3f7a182d25 gnu: Add python-mutagen. 
* gnu/packages/music.scm (python-mutagen, python2-mutagen): New variables.
 2016-03-18 14:27:16 -04:00
Mark H Weaver
0e0fd3ef10 gnu: linux-libre-4.4: Update to 4.4.6. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.6.
 2016-03-18 11:03:16 -04:00
David Thompson
8961b4d362 gnu: bundler: Update to 1.11.2. 
* gnu/packages/ruby.scm (bundler): Update to 1.11.2.
 2016-03-18 08:48:40 -04:00
Andreas Enge
019b38758c gnu: vigra: Update to 1.11.0. 
* gnu/packages/image.scm (vigra)[source]: Update to 1.11.0.
  [arguments]: Disable parallel builds.
 2016-03-18 09:01:02 +01:00
Efraim Flashner
c5e2b69d59 gnu: aria2: Update to 1.21.0. 
* gnu/packages/bittorrent.scm (aria2): Update to 1.21.0.
 2016-03-18 08:29:30 +02:00
Mark H Weaver
e3d3546eda gnu: libotr: Fix tests on mips64el. 
* gnu/packages/patches/libotr-test-auth-fix.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/messaging.scm (libotr)[source]: Add patch.
 2016-03-17 19:05:08 -04:00
Efraim Flashner
f1723b8be6 gnu: postgresql: Update to 9.5.1. 
* gnu/packages/databases.scm (postgresql): Update to 9.5.1.
 2016-03-17 21:59:32 +02:00
Efraim Flashner
23bbd7dd60 gnu: mysql: Update to 5.7.11. 
* gnu/packages/databases.scm (mysql): Update to 5.7.11.
[source]: Add archives as alternate download location.
[arguments]: Remove custom phase 'strip-extra-references. Add
substitution to target boost-1.60.
 2016-03-17 21:59:32 +02:00
Andy Wingo
2914af3c96 gnu: gnome-session: Add elogind input. 
* gnu/packages/gnome.scm (gnome-session): Add elogind input, while
  disabling the use of systemd's journal.
 2016-03-17 18:11:42 +01:00
Ricardo Wurmus
953c12232f gnu: bless: Remove bundled sources for sparsehash. 
* gnu/packages/bioinformatics.scm (bless)[source]: Delete
"google-sparsehash" sources.
[inputs]: Add "sparsehash".
 2016-03-17 13:01:31 +01:00
Ricardo Wurmus
6c1305f9ec gnu: Add CD-HIT. 
* gnu/packages/bioinformatics.scm (cd-hit): New variable.
 2016-03-17 13:01:31 +01:00
Andy Wingo
fa4b8badf0 gnu: elogind: Update to 219.14. 
* gnu/packages/freedesktop.scm (elogind): Update to 219.14.
 2016-03-17 09:44:32 +01:00
Alex Kost
e6527d643e gnu: emacs-pdf-tools: Add missing input. 
This is a followup to commit eccd0b57a1.

* gnu/packages/emacs.scm (emacs-pdf-tools)[propagated-inputs]: Add
'let-alist'.
 2016-03-17 10:49:45 +03:00
Alex Kost
1bcae5c5c5 gnu: emacs-pdf-tools: Use emacs-build-system for elisp side. 
* gnu/packages/emacs.scm (emacs-pdf-tools)[arguments]: Add phases from
emacs-build-system to build elisp side.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2016-03-17 10:49:45 +03:00
Ricardo Wurmus
5e3161d38e gnu: Add WAH plugins. 
* gnu/packages/audio.scm (wah-plugins): New variable.
 2016-03-17 08:25:21 +01:00
Ricardo Wurmus
c04b4e7aea gnu: Add STE plugins. 
* gnu/packages/audio.scm (ste-plugins): New variable.
 2016-03-17 08:25:21 +01:00
Ricardo Wurmus
75f45d16d4 gnu: Add FIL plugins. 
* gnu/packages/audio.scm (fil-plugins): New variable.
 2016-03-17 08:25:21 +01:00
Ricardo Wurmus
dffb6c3be6 gnu: Add REV plugins. 
* gnu/packages/audio.scm (rev-plugins): New variable.
 2016-03-17 08:25:21 +01:00
Ricardo Wurmus
8ba62f92ec gnu: Add AMB plugins. 
* gnu/packages/audio.scm (amb-plugins): New variable.
 2016-03-17 08:25:21 +01:00
Ricardo Wurmus
ed17465d3d gnu: Add g2reverb. 
* gnu/packages/audio.scm (g2reverb): New variable.
 2016-03-17 08:25:21 +01:00
Ricardo Wurmus
eb4fca7ebf gnu: Add vco-plugins. 
* gnu/packages/audio.scm (vco-plugins): New variable.
 2016-03-17 08:25:21 +01:00
Ricardo Wurmus
fb2e072cec gnu: Add mcp-plugins. 
* gnu/packages/audio.scm (mcp-plugins): New variable.
 2016-03-17 08:25:21 +01:00
Jochem Raat
65829fec47 gnu: Add perl-text-neattemplate. 
* gnu/packages/perl.scm (perl-text-neattemplate): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-03-17 00:39:33 -04:00
Tobias Geerinckx-Rice
08e9daf505 gnu: Add freefall. 
* gnu/packages/linux.scm (freefall): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-03-17 00:25:41 -04:00
Efraim Flashner
e3bf5d2cb2 gnu: mariadb: Update to 10.1.12. 
* gnu/packages/databases.scm (mariadb): Update to 10.1.12.
 2016-03-17 02:17:04 +02:00
Eric Bavier
dfdf571688 gnu: petsc: Fix compiler configuration references. 
* gnu/packages/maths.scm (petsc)[arguments]: When patching compiler
  driver paths, do not assume they come from fortran input.
 2016-03-16 18:32:25 -05:00
Eric Bavier
d588422e13 gnu: slepc: Set origin file-name. 
* gnu/packages/maths.scm (slepc)[source]: Add file-name.
 2016-03-16 18:32:25 -05:00
Mark H Weaver
ce362de86e gnu: Fix definitions of gcc-toolchain-4.8 and gcc-toolchain-4.9. 
* gnu/packages/commencement.scm (gcc-toolchain-4.8): Use gcc-4.8,
not gcc-final.
(gcc-toolchain-4.9): Use gcc-final, not gcc-4.9.
* gnu/packages/gcc.scm (gcc): Add reminder comment for the future.
 2016-03-16 18:06:52 -04:00
Ludovic Courtès
092dd6541f gnu: guix: Update development snapshot to 71e2065. 
* gnu/packages/package-management.scm (guix-devel): Update to 71e2065.
 2016-03-16 19:03:12 +01:00
Efraim Flashner
87f7625bf5 gnu: offlineimap: Update to 6.7.0. 
* gnu/packages/mail.scm (offlineimap): Update to 6.7.0.
 2016-03-16 19:52:40 +02:00
Andreas Enge
81b55bf7a9 gnu: cm: Update to 0.3. 
* gnu/packages/algebra.scm (cm): Update to 0.3.
  [license]: Change to gpl3+.
 2016-03-16 14:29:36 +01:00
Roel Janssen
247d498aaa gnu: Add r-dnacopy. 
* gnu/packages/bioinformatics.scm (r-dnacopy): New variable.
 2016-03-16 11:23:27 +01:00
Rob Syme
6a35566df7 gnu: Add codingquarry. 
* gnu/packages/bioinformatics.scm (codingquarry): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-03-16 04:49:27 -04:00
Tobias Geerinckx-Rice
8e14e059c4 gnu: Add idle3-tools. 
* gnu/packages/disk.scm (idle3-tools): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-03-16 02:35:06 -04:00
Efraim Flashner
892f92b7aa gnu: neon: Update to 0.30.1. 
* gnu/packages/version-control.scm (neon): Update to 0.30.1.
 2016-03-16 05:46:50 +02:00
Efraim Flashner
5575917d13 gnu: mercurial: Update to 3.7.2. 
* gnu/packages/version-control.scm (mercurial): Update to 3.7.2.
[source]: Update to mercurial-scm.org.
[home-page]: Same.
 2016-03-16 05:46:50 +02:00
宋文武
34dc3907ac gnu: Add gdk-pixbuf+svg. 
* gnu/packages/gtk.scm (gdk-pixbuf+svg): New variable.
 2016-03-16 09:07:00 +08:00
Leo Famulari
1714e2c39c gnu: git: Update to 2.7.3 [unspecified security fixes]. 
* gnu/packages/version-control.scm (git): Update to 2.7.3.
(git-manpages)[source]: Update hash.
 2016-03-15 19:41:23 -04:00
Andy Wingo
7a2413e46d gnu: services: Add GNOME and XFCE desktop services. 
* gnu/services/desktop.scm (package-direct-input-selector): New
  function.
  (<gnome-desktop-configuration>, gnome-desktop-service-type)
  (<xfce-desktop-configuration>, xfce-desktop-service-type): New
  variables.
  (gnome-desktop-service, xfce-desktop-service): New public variables.

* doc/guix.texi (Desktop Services): Document new variables.
 2016-03-15 21:03:27 +01:00
Mark H Weaver
a3b84f70d8 Merge branch 'master' into security-updates 2016-03-15 12:40:53 -04:00
Leo Famulari
20095cc513 gnu: xfce: Add xfce4-power-manager. 
* gnu/packages/xfce.scm (xfce)[propagated-inputs]: Add xfce4-power-manager.
 2016-03-15 11:57:40 -04:00
Florian Paul Schmidt
c29e5fda3e gnu: Add xfce4-power-manager. 
* gnu/packages/xfce.scm (xfce4-power-manager): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-03-15 11:57:40 -04:00
Mark H Weaver
75b314a615 gnu: linux-libre: Update to 4.5, while preserving linux-libre-4.4. 
* gnu/packages/linux-libre-x86_64.conf: Rename to ...
* gnu/packages/linux-libre-4.4-x86_64.conf: ... this.
* gnu/packages/linux-libre-i686.conf: Rename to ...
* gnu/packages/linux-libre-4.4-i686.conf: ... this.
* gnu/packages/linux-libre-4.5-i686.conf,
gnu/packages/linux-libre-4.5-x86_64.conf: New files.
* Makefile.am (KCONFIGS): Update accordingly.
* gnu/packages/linux.scm (linux-libre): Update to 4.5.
(linux-libre-4.4): New variable.
 2016-03-15 11:09:00 -04:00
Chris Marusich
4d343a141b doc: Clarify and consolidate modify-services documentation. 
* doc/guix.texi ("Using the Configuration System"): Move the example...
("Service Reference"): ...to here, and clarify more.
* gnu/services.scm (modify-services): Update docstring to mention the
return type.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2016-03-15 15:54:02 +01:00
Efraim Flashner
20109e07bd gnu: gitolite: Update to 3.6.5. 
* gnu/packages/version-control.scm (gitolite): Update to 3.6.5.
[source]: Remove patch.
* gnu/packages/patches/gitolite-openssh-6.8-compat.patch: Remove file.
* gnu-system.am (dist_patch_DATA): Remove it.
 2016-03-15 07:10:35 +02:00
Efraim Flashner
b65195c2cc gnu: shflags: Update to 1.2.0. 
* gnu/packages/version-control.scm (shflags): Update to 1.2.0.
[source]: Switch to github.
[home-page]: Project moved to github.
 2016-03-15 07:10:35 +02:00
Efraim Flashner
3a099d179a gnu: libgit2: Update to 0.24.0. 
* gnu/packages/version-control.scm (libgit2): Update to 0.24.0.
[inputs]: Switch python to python-wrapper.
 2016-03-15 07:10:35 +02:00
David Thompson
9ced12de01 gnu: kodi: Update to 16.0. 
* gnu/packages/kodi.scm (kodi): Update to 16.0.
[inputs]: Add crossguid, dcadec, and util-linux.
 2016-03-14 13:33:01 -04:00
David Thompson
680b54c5ce gnu: Add dcadec. 
* gnu/packages/audio.scm (dcadec): New variable.
 2016-03-14 13:33:01 -04:00
David Thompson
1e3fbf3c6d gnu: Add crossguid. 
* gnu/packages/kodi.scm (crossguid): New variable.
 2016-03-14 13:33:01 -04:00
Ricardo Wurmus
10b4a969be gnu: htsjdk: Use ant-build-system. 
* gnu/packages/bioinformatics.scm (htsjdk)[build-system]: Use
ant-build-system.
[arguments]: Adapt for ant-build-system.
 2016-03-14 14:30:03 +01:00
Ricardo Wurmus
535e2a2fee gnu: ant: Update source URL. 
* gnu/packages/java.scm (ant)[source]: Use Apache mirror instead of
  plain URL.
 2016-03-14 12:36:49 +01:00
Ricardo Wurmus
e1a5615875 build: reset-timestamps: Include directories. 
* guix/build/install.scm (reset-timestamps): Reset timestamps of
  directories as well.
 2016-03-14 12:36:49 +01:00
Ricardo Wurmus
846e340954 gnu: Add pyicoteo. 
* gnu/packages/bioinformatics.scm (pyicoteo): New variable.
 2016-03-14 12:36:49 +01:00
Efraim Flashner
388e05ee16 gnu: enlightenment: Update to 0.20.6. 
* gnu/packages/enlightenment.scm (enlightenment): Update to 0.20.6.
 2016-03-14 12:12:53 +02:00
Leo Famulari
61c30e9d23 gnu: Add khard. 
* gnu/packages/mail.scm (khard): New variable.
 2016-03-13 18:52:30 -04:00
Leo Famulari
eed1a61fbb gnu: Add python-vobject. 
* gnu/packages/python.scm (python-vobject, python2-vobject): New variables.
 2016-03-13 18:52:30 -04:00
Leo Famulari
ed07b08d93 gnu: Split python2-pyicu into python-pyicu and python2-pyicu. 
* gnu/packages/python.scm (python2-pyicu): Split variable into...
(python-pyicu, python2-pyicu): ...both Python variants.
(python-pyicu)[arguments]: Enable tests.
 2016-03-13 18:52:30 -04:00
Leo Famulari
d3b29319b1 gnu: python2-pyicu: Update to 1.9.2. 
* gnu/packages/python.scm (python2-pyicu): Update to 1.9.2.
 2016-03-13 18:52:30 -04:00
Leo Famulari
9bb6d18482 gnu: Add python2-atomicwrites. 
* gnu/packages/python.scm (python2-atomicwrites): New variable.
 2016-03-13 18:52:30 -04:00
Nils Gillmann
aae6b4b9a9 gnu: Add font-un. 
* gnu/packages/fonts.scm (font-un): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-03-13 23:39:26 +01:00
Jochem Raat
467c498bdc gnu: Add Dutch Aspell dictionary. 
* gnu/packages/aspell.scm (aspell-dict-nl): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-03-13 23:39:26 +01:00
Jookia
b6ecac93d6 gnu: Add Google Noto font. 
* gnu/packages/fonts.scm (font-google-noto): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-03-13 23:39:26 +01:00
Leo Famulari
36455a9672 gnu: vdirsyncer: Update 0.9.2. 
* gnu/packages/dav.scm (vdirsyncer): Update to 0.9.2.
[arguments]: Run the test suite after installation. Use DETERMINISTIC_TESTS.
Run tests with `make` instead of "py.test".
[native-inputs]: Remove python-pytest-xprocess and python-oauthlib.
 2016-03-13 18:26:48 -04:00
Leo Famulari
bea6d94d24 gnu: python-hypothesis: Update to 3.1.0. 
* gnu/packages/python.scm (python-hypothesis, python2-hypothesis): Update to
3.1.0.
 2016-03-13 18:26:48 -04:00
Efraim Flashner
03aef4a795 gnu: libcddb: Update to 1.3.2. 
* gnu/packages/cdrom.scm (libcddb): Update to 1.3.2.
 2016-03-13 21:29:51 +02:00
Efraim Flashner
036fd4f27f gnu: dvdisaster: Update to 0.79.5. 
* gnu/packages/cdrom.scm (dvdisaster): Update to 0.79.5.
 2016-03-13 21:29:51 +02:00
Efraim Flashner
7df85799b1 gnu: abcde: Use 'modify-phases'. 
* gnu/packages/cdrom.scm (adcde)[arguments]: Use 'modify-phases'.
 2016-03-13 21:29:51 +02:00
Efraim Flashner
1bb4005fbd gnu: abcde: Update to 2.7.1. 
* gnu/packages/cdrom.scm (abcde): Update to 2.7.1.
[home-page]: Use https.
 2016-03-13 21:29:51 +02:00
Leo Famulari
03422bf834 gnu: libmbim: Use HTTPS URL. 
* gnu/packages/freedesktop.scm (libmbim)[source]: Use HTTPS URL.
 2016-03-13 14:28:38 -04:00
Efraim Flashner
7ff165da48 gnu: frescobaldi: Update to 2.18.2. 
* gnu/packages/music.scm (frescobaldi): Update to 2.18.2.
 2016-03-13 14:31:46 +02:00
Efraim Flashner
5c85c7265a gnu: libuninameslist: Update to 0.5.20150701. 
* gnu/packages/fontutils.scm (libuninameslist): Update to 0.5.20150701.
 2016-03-13 14:31:46 +02:00
Efraim Flashner
edca4cbeba gnu: jrnl: Update to 1.9.7. 
* gnu/packages/jrnl.scm (jrnl): Update to 1.9.7.
[native-inputs]: Remove python-setuptools.
 2016-03-13 14:31:46 +02:00
Alex Kost
29f9abb4ca gnu: font-ubuntu: Update to 0.83. 
* gnu/packages/fonts.scm (font-ubuntu): Update to 0.83.
 2016-03-13 13:16:40 +03:00
Alex Kost
e2a3d69003 gnu: manaplus: Update to 1.6.3.12. 
* gnu/packages/games.scm (manaplus): Update to 1.6.3.12.
 2016-03-13 13:16:23 +03:00
Alex Kost
acd62175e2 gnu: git-modes: Update to 1.2.1. 
* gnu/packages/emacs.scm (git-modes): Update to 1.2.1.
 2016-03-13 12:54:12 +03:00
Efraim Flashner
eb4f2cd7e3 gnu: glpk: Update to 4.59. 
* gnu/packages/maths.scm (glpk): Update to 4.59.
 2016-03-12 23:07:09 +02:00
Mark H Weaver
2c9f0b0770 Merge branch 'master' into security-updates 2016-03-12 15:07:41 -05:00
Efraim Flashner
9591e11a4c gnu: samba: Update to 4.3.6 [fixes CVE-2015-7560, CVE-2016-0771]. 
* gnu/packages/samba.scm (samba): Update to 4.3.6.
 2016-03-12 21:53:03 +02:00
Leo Famulari
e1c644a044 gnu: accountsservice: Use HTTPS URL. 
* gnu/packages/freedesktop.scm (accountsservice)[source]: Use HTTPS URL.
 2016-03-12 12:20:18 -05:00
Andreas Enge
dfbe56c36d gnu: mupdf: Update to 1.8. 
* gnu/packages/pdf.scm (mupdf): Update to 1.8.
 2016-03-12 10:03:38 +01:00
Andreas Enge
8e755b1bcd gnu: mupdf: Simplify package. 
* gnu/packages/pdf.scm (mupdf)[source]: Drop patch and part of snippet
  modifying permissions of files added by the patch.
  [arguments]: Use #:make-flags instead of modified build and install phases.
  Drop superfluous module inclusion. Use modify-phases syntax.
* gnu/packages/patches/mupdf-buildsystem-fix.patch: Remove patch.
* gnu-system.am (dist_patch_DATA): Unregister patch.
 2016-03-12 09:56:27 +01:00
Danny Milosavljevic
0ede252b66 gnu: Add fluxbox. 
* gnu/packages/wm.scm (fluxbox): New variable.

Co-authored-by: Eric Bavier <bavier@member.fsf.org>
 2016-03-11 20:43:51 -06:00
Mark H Weaver
81a9653983 gnu: webkitgtk: Update to 2.10.8 [fixes CVE-2016-1726]. 
* gnu/packages/webkit.scm (webkitgtk): Update to 2.10.8.
 2016-03-11 17:59:05 -05:00
Leo Famulari
bce6f7ce63 gnu: openexr: Disable broken test to fix build on i686. 
* gnu/packages/graphics.scm (openexr)[arguments]: New field.
 2016-03-11 15:08:32 -05:00
Ludovic Courtès
66a30a3ea4 gnu: libevent: Update to 2.0.22 [fixes CVE-2015-6525]. 
* gnu/packages/libevent.scm (libevent): Update to 2.0.22.
 2016-03-11 16:33:50 +01:00
Ludovic Courtès
ef0f0d5f97 gnu: vorbis-tools: Patch buffer overflow [fixes CVE-2015-6749]. 
* gnu/packages/patches/vorbis-tools-CVE-2015-6749.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/xiph.scm (vorbis-tools)[source]: Use it.
 2016-03-11 16:33:50 +01:00
Nils Gillmann
d381962f35 gnu: Add powwow. 
* gnu/packages/games.scm (powwow): New variable.
 2016-03-11 08:37:11 +08:00
Roel Janssen
a0a71439fa gnu: Add bioawk. 
* gnu/packages/bioinformatics.scm (bioawk): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-03-10 18:37:25 -05:00
Mark H Weaver
7bf4bd0991 gnu: linux-libre: Update to 4.4.5. 
* gnu/packages/linux.scm (linux-libre): Update to 4.4.5.
 2016-03-10 18:17:31 -05:00
Raimon Grau
9514662322 gnu: Add nload. 
* gnu/packages/networking.scm (nload): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-03-10 16:48:16 -05:00
Leo Famulari
ff22f01d67 gnu: dropbear: Update to 2016.72 [fixes CVE-2016-3116]. 
* gnu/packages/ssh.scm (dropbear): Update to 2016.72.
 2016-03-10 15:34:05 -05:00
Leo Famulari
efa3752964 gnu: openssh: Update to 7.2p2 [fixes CVE-2016-3115]. 
* gnu/packages/ssh.scm (openssh): Update to 7.2p2.
 2016-03-10 15:34:05 -05:00
Efraim Flashner
a232ce429e gnu: catch: Update to 1.3.5. 
* gnu/packages/check.scm (catch): Update to 1.3.5.
 2016-03-10 21:41:24 +02:00
Efraim Flashner
34a6f4dcf9 gnu: cppunit: Update to 1.13.2. 
* gnu/packages/check.scm (cppunit): Update to 1.13.2.
[source]: Change to libreoffice's hosted release tarballs.
[home-page]: Change to freedesktop.
 2016-03-10 21:25:31 +02:00
Efraim Flashner
591f1d3e4c gnu: lcov: Update to 1.12. 
* gnu/packages/code.scm (lcov): Update to 1.12.
 2016-03-10 20:20:26 +02:00
Efraim Flashner
1d116171a0 gnu: the-silver-searcher: Update to 0.31.0. 
* gnu/packages/code.scm (the-silver-searcher): Update to 0.31.0.
 2016-03-10 20:17:50 +02:00
Efraim Flashner
1e42d8b8ba gnu: complexity: Update to 1.10. 
* gnu/packages/code.scm (complexity): Update to 1.10.
 2016-03-10 20:15:15 +02:00
Efraim Flashner
9720651942 gnu: libass: Update to 0.13.2. 
* gnu/packages/video.scm (libass): Update to 0.13.2.
 2016-03-10 18:23:40 +02:00
Efraim Flashner
83820c0f10 gnu: obs: Update to 0.13.2. 
* gnu/packages/video.scm (obs): Update to 0.13.2.
 2016-03-10 18:23:40 +02:00
Mark H Weaver
c3499ad6b8 gnu: icecat: Add several security fixes. 
* gnu/packages/patches/icecat-CVE-2015-4477.patch,
gnu/packages/patches/icecat-CVE-2015-7207.patch,
gnu/packages/patches/icecat-CVE-2016-1952-pt01.patch,
gnu/packages/patches/icecat-CVE-2016-1952-pt02.patch,
gnu/packages/patches/icecat-CVE-2016-1952-pt03.patch,
gnu/packages/patches/icecat-CVE-2016-1952-pt04.patch,
gnu/packages/patches/icecat-CVE-2016-1952-pt05.patch,
gnu/packages/patches/icecat-CVE-2016-1952-pt06.patch,
gnu/packages/patches/icecat-CVE-2016-1954.patch,
gnu/packages/patches/icecat-CVE-2016-1960.patch,
gnu/packages/patches/icecat-CVE-2016-1961.patch,
gnu/packages/patches/icecat-CVE-2016-1962.patch,
gnu/packages/patches/icecat-CVE-2016-1964.patch,
gnu/packages/patches/icecat-CVE-2016-1965.patch,
gnu/packages/patches/icecat-CVE-2016-1966.patch,
gnu/packages/patches/icecat-CVE-2016-1974.patch,
gnu/packages/patches/icecat-bug-1248851.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/gnuzilla.scm (icecat)[source]: Add patches.
 2016-03-10 10:52:41 -05:00
Efraim Flashner
2f9862ffd0 gnu: isc-dhcp: Update bundled bind to 9.9.8-P4 [fixes CVE-2016-1285, CVE-2016-1286]. 
* gnu/packages/admin.scm (isc-dhcp): Update bundled bind to 9.9.8-P4.
 2016-03-10 09:49:04 +02:00
Efraim Flashner
0d88031c2f gnu: bind-utils: Update to 9.10.3-P4 [fixes CVE-2016-1285, CVE-2016-1286]. 
* gnu/packages/dns.scm (bind-utils): Update to 9.10.3-P4.
 2016-03-10 09:29:55 +02:00
Ricardo Wurmus
82f145ef7a gnu: custom-gcc: Delete broken or conflicting executables. 
* gnu/packages/gcc.scm (custom-gcc)[arguments]: Add phase to remove
executables that are non-functional or conflict with the executables of
"gcc".
 2016-03-10 07:12:27 +01:00
宋文武
ce6027bf43 gnu: nautilus: Don't propagate gtk+. 
* gnu/packages/gnome.scm (nautilus): Move gtk+ from propagated-inputs to inputs.
 2016-03-10 08:27:53 +08:00
Andreas Enge
8bcdc23fd0 gnu: texlive: Make texlive-bin and texlive-texmf private. 
* gnu/packages/texlive.scm (texlive-bin, texlive-texmf): Define the variables
  as non-public; they should not be installed into a profile.
 2016-03-09 22:36:45 +01:00
Andreas Enge
fde6060347 gnu: po4a: Use texlive-minimal instead of texlive-bin. 
* gnu/packages/gettext.scm (po4a)[inputs]: Replace texlive-bin by
  texlive-minimal.
 2016-03-09 22:36:45 +01:00
Andreas Enge
aad375c9bc gnu: statistics: Remove import of unused texlive module. 
* gnu/packages/statistics.scm: Do not import (gnu packages texlive).
 2016-03-09 22:36:45 +01:00
Andreas Enge
289adba7a3 gnu: gnuplot: Use texlive-minimal instead of texlive-bin. 
* gnu/packages/maths.scm (gnuplot)[inputs]: Replace texlive-bin by
  texlive-minimal.
 2016-03-09 22:36:45 +01:00
Tobias Geerinckx-Rice
fb9ca51130 gnu: simple-scan: Update to 3.19.91. 
* gnu/packages/gnome.scm (simple-scan): Update to 3.19.91.
[arguments]: Add 'clean' phase.
 2016-03-09 15:55:33 -05:00
Mark H Weaver
f97334220c gnu: pidgin-otr: Update to 4.0.2. 
* gnu/packages/messaging.scm (pidgin-otr): Update to 4.0.2.
 2016-03-09 15:51:16 -05:00
Andreas Enge
5adb3a4db4 gnu: libotr: Remove version 3.2.1. 
* gnu/packages/messaging.scm (libotr-3): Remove variable.
 2016-03-09 21:31:18 +01:00
Leo Famulari
89e58e8e8c libotr: Update to 4.1.1 [fixes CVE-2016-2851]. 
* gnu/packages/messaging.scm (libotr): Update to 4.1.1.
[native-inputs]: New field.
 2016-03-09 15:19:50 -05:00
Ludovic Courtès
f5a9103991 gnu: dbus: Incorporate "dbus-helper-search-path.patch". 
* gnu/packages/glib.scm (dbus)[source]: Apply
"dbus-helper-search-path.patch".
(dbus/activation): Remove.
* gnu/services/dbus.scm (<dbus-configuration>)[dbus]: Default to DBUS.
(dbus-service): Likewise.
 2016-03-09 15:31:23 +01:00
Ludovic Courtès
255f730879 gnu: eudev: Add dependency on blkid. 
* gnu/packages/linux.scm (eudev)[inputs]: Add UTIL-LINUX.
(eudev-with-blkid): Remove.
* gnu/services/base.scm (udev-service): Use EUDEV instead of
EUDEV-WITH-BLKID.
* gnu/system.scm (%base-packages): Likewise.
 2016-03-09 15:26:09 +01:00
Ludovic Courtès
297a36abfc gnu: graphite2: Update to 1.3.6. 
* gnu/packages/fontutils.scm (graphite2)[replacement]: Remove.
[version, source]: Update to 1.3.6.
(graphite2-1.3.6): Remove.
 2016-03-09 15:23:12 +01:00
Ludovic Courtès
4cff124bbf gnu: openssl: Update to 1.0.2g. 
* gnu/packages/tls.scm (openssl)[replacement]: Remove.
[version, source]: Bump to 1.0.2g.  Use "openssl-c-rehash-in.patch"
instead of "openssl-c-rehash.patch".
(openssl-1.0.2g): Remove.
* gnu-system.am (dist_patch_DATA): Remove "openssl-c-rehash.patch".
 2016-03-09 15:20:34 +01:00
Ludovic Courtès
4d1a35fabc gnu: perl: Incorporate patch for CVE-2016-2381. 
* gnu/packages/perl.scm (perl)[source]: Add "perl-CVE-2016-2381.patch".
[replacement]: Remove.
(perl-fixed): Remove.
 2016-03-09 15:17:12 +01:00
Ludovic Courtès
6da23c0429 gnu: complexity: Update to 1.9. 
* gnu/packages/code.scm (complexity): Update to 1.9.
 2016-03-09 15:10:20 +01:00
Efraim Flashner
00eb9fa3e2 gnu: Add liblangtag. 
* gnu/packages/libreoffice.scm (liblangtag): New variable.

Co-authored-by: Andreas Enge <andreas@enge.fr>
 2016-03-09 14:27:19 +01:00
Andreas Enge
ebc816311c gnu: libreoffice: Enable parallel build. 
* gnu/packages/libreoffice.scm (libreoffice)[arguments]: Enable parallel
  build.
 2016-03-09 14:27:19 +01:00
Ludovic Courtès
112024826d system: Explicitly set umask to 022 in /etc/profile. 
Fixes <http://bugs.gnu.org/22650>.
Reported by myglc2 <myglc2@gmail.com>.

* gnu/system.scm (operating-system-etc-service)[profile]: Invoke
'umask'.
 2016-03-08 23:30:53 +01:00
Ludovic Courtès
efb107e0cd packages: Gracefully report packages not found. 
Fixes a thinko introduced in 1b846da8c3
that would lead to a backtrace when looking for an unknown package.

* gnu/packages.scm (%find-package): Correct logic when checking for
FALLBACK?.
 2016-03-08 11:48:21 +01:00
Ludovic Courtès
95cd4971d0 packages: Support the deprecated "NAME-VERSION" syntax. 
Fixes a typo introduced in 1b846da8c3 that
would lead to a backtrace when using the deprecated syntax.

* gnu/packages.scm (%find-package): Turn the first argument to
'call-with-values' into a thunk.  Use #:select instead of '@' to select
the right 'package-name->name+version' procedure.
 2016-03-08 11:38:46 +01:00
Ludovic Courtès
7befee308b packages: Clarify NAME-VERSION deprecation message. 
* gnu/packages.scm (%find-package): Clarify message; remove trailing
period.
 2016-03-08 11:36:16 +01:00
Efraim Flashner
e224495ce1 gnu: jasper: Add fixes for CVE-2016-1577, CVE-2016-2089, CVE-2016-2116. 
* gnu/packages/patches/jasper-CVE-2016-1557.patch,
gnu/packages/patches/jasper-CVE-2016-2089.patch,
gnu/packages/patches/jasper-CVE-2016-2116.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/image.scm (jasper)[source]: Add patches.
 2016-03-08 11:54:58 +02:00
Leo Famulari
165e0382b3 gnu: libreoffice: Update to 5.0.5.2 [fixes CVE-2016-{0794, 0795}]. 
* gnu/packages/libreoffice.scm (libreoffice): Update to 5.0.5.2.
 2016-03-07 22:55:45 -05:00
Mark H Weaver
a90d24715b gnu: linux-libre: Update to 4.1.19. 
* gnu/packages/linux.scm (linux-libre): Update to 4.1.19.
 2016-03-07 19:17:39 -05:00
Mark H Weaver
ac00a3d897 gnu: linux-libre: Update to 4.4.4. 
* gnu/packages/linux.scm (linux-libre): Update to 4.4.4.
 2016-03-07 19:17:39 -05:00
Andy Wingo
ef7516aa04 gnu: network-manager: Update to 1.0.10. 
* gnu/packages/gnome.scm (network-manager): Update to 1.0.10.
  (network-manager-applet): Likewise.
  (%network-manager-glib-duplicate-test-patch): Remove.
 2016-03-07 21:15:37 +01:00
Andy Wingo
b4f59d87a6 gnu: network-manager: Disable failing tests. 
* gnu/packages/gnome.scm (network-manager): Add pre-configure phase.
 2016-03-07 21:14:23 +01:00
Andy Wingo
c42602b5cb gnu: elogind: Update to 219.13. 
* gnu/packages/freedesktop.scm (elogind): Update to 219.13.  Remove
  build fix that is no longer needed.  Update home page.
 2016-03-07 21:10:00 +01:00
Andy Wingo
a7e50a2a03 gnu: system: Add elogind cgroup mount. 
* gnu/system/file-systems.scm (%elogind-file-systems): Add elogind
  cgroup mount.
 2016-03-07 21:10:00 +01:00
Ricardo Wurmus
0e2f2aebed gnu: Add Blender. 
* gnu/packages/graphics.scm (blender): New variable.
 2016-03-07 20:58:25 +01:00
宋文武
201cfb81d1 gnu: Add gst-python. 
* gnu/packages/gstreamer.scm (python-gst, python2-gst): New variables.
 2016-03-07 09:57:20 +08:00
宋文武
fa7cf82ebe gnu: python-pygobject: Propagate glib and libffi. 
* gnu/packages/glib.scm (python-pygobject): Move glib and libffi to propagated-inputs.
(python2-pygobject)[inputs]: Remove glib and libffi.
 2016-03-07 09:57:20 +08:00
宋文武
e28f95a963 gnu: python-pygobject: Add search path for GI_TYPELIB_PATH. 
* gnu/packages/glib.scm (python-pygobject)[native-search-paths]: Use the
same search paths as gobject-introspection.
 2016-03-07 09:57:20 +08:00
宋文武
b3585d9bda gnu: orc: Update to 0.4.25. 
* gnu/packages/gstreamer.scm (orc): Update to 0.4.25.
 2016-03-07 09:57:20 +08:00
宋文武
60a0886d72 services: Use 'packages->manifest' in 'packages->profile-entry'. 
This allows using (PACKAGE OUTPUT) in the packages field.
Reported by Jan Nieuwenhuizen <janneke@gnu.org>.

* gnu/services.scm (packages->profile-entry): Use 'packages->manifest'.
 2016-03-07 09:57:20 +08:00
Ludovic Courtès
956ad60cad services: elogind: Rely on D-Bus activation. 
Previously elogind was explicitly spawned by the Shepherd.  Now it is
activated by dbus-daemon on demand.

* gnu/packages/freedesktop.scm (elogind)[arguments]: Add
'fix-service-file' phase.
* gnu/services/desktop.scm (elogind-shepherd-service): Remove.
(elogind-dbus-service): New procedure.
(elogind-service-type): Do not extend SHEPHERD-ROOT-SERVICE-TYPE.  Use
'elogind-dbus-service' for DBUS-ROOT-SERVICE-TYPE.
 2016-03-07 00:01:03 +01:00
Ricardo Wurmus
afadb05e58 gnu: alsa-modular-synth: Insert space to separate linker flags. 
* gnu/packages/audio.scm (alsa-modular-synth)[arguments]: Add build
phase to separate linker flags.
 2016-03-06 21:17:05 +01:00
Ricardo Wurmus
ee6a88b118 gnu: alsa-modular-synth: Drop Qt 4. 
* gnu/packages/audio.scm (alsa-modular-synth)[inputs]: Replace "qt-4"
with "qt".
[arguments]: Add configure flag to build with Qt 5.
 2016-03-06 21:17:05 +01:00
Andreas Enge
451b5c5dc6 gnu: vigra: Update to a development snapshot. 
* gnu/packages/image.scm (vigra): Update to a git snapshot to fix build
  problems with the current python-numpy.
 2016-03-05 19:09:42 +01:00
Andreas Enge
d7c4619bd1 gnu: Add einstein. 
* gnu/packages/games.scm (einstein): New variable.
* gnu/packages/patches/einstein-build.patch: New file.
* gnu-system.am (dist_patch_DATA): Register patch.
 2016-03-05 18:44:43 +01:00
Andreas Enge
03d55eeca7 gnu: jalv: Drop Qt-4 support. 
* gnu/packages/audio.scm (jalv)[inputs]: Drop qt-4. It does not receive any
  upstream security updates, and Qt-4 support is marked as experimental in
  the jalv documentation.
 2016-03-05 12:20:09 +01:00
Leo Famulari
eda0522aab gnu: letsencrypt, python-acme: Update to 0.4.2. 
These packages should be updated together.

* gnu/packages/tls.scm (letsencrypt): Update to 0.4.2.
(python-acme, python2-acme): Update to 0.4.2.
 2016-03-04 18:10:00 -05:00
Leo Famulari
65f1b8a591 gnu: python-cryptography, python-cryptography-vectors: Update to 1.2.3. 
These packages should be updated together.

* gnu/packages/python.scm (python-cryptography): Update to 1.2.3.
(python-cryptography-vectors): Update to 1.2.3.
 2016-03-04 18:09:20 -05:00
Ludovic Courtès
44abcb2868 doc: Mention syslogd configuration. 
* gnu/services/base.scm (syslog-service): Add xref to Inetutils in the
docstring.
(%default-syslog.conf): Export.
* doc/guix.texi (Base Services): Update accordingly.
 2016-03-04 11:48:52 +01:00
Ludovic Courtès
fe4e698d77 gnu: gnome: Sync description and synopsis. 
* gnu/packages/gnome.scm (gnome)[synopsis, description]: Use official
GNU blurb.
 2016-03-04 11:48:52 +01:00
Ludovic Courtès
ffaf83dfb1 gnu: nano: Update to 2.5.3. 
* gnu/packages/nano.scm (nano): Update to 2.5.3.
 2016-03-04 11:48:52 +01:00
Ludovic Courtès
4978ffcfc2 gnu: libgit2: Update to 0.23.4. 
* gnu/packages/version-control.scm (libgit2): Update to 0.23.4.
 2016-03-04 11:48:52 +01:00
Ludovic Courtès
9c7e7eadfa gnu: findnewest: Update to 0.3. 
* gnu/packages/version-control.scm (findnewest): Update to 0.3.
 2016-03-04 11:48:52 +01:00
Leo Famulari
c7658f8f2c gnu: exim: Update to 4.86.2 [fixes CVE-2016-1531]. 
* gnu/packages/mail.scm (exim): Update to 4.86.2.
 2016-03-03 20:38:47 -05:00
David Thompson
4a52671131 gnu: Add byzanz. 
* gnu/packages/gnome.scm (byzanz): New variable.
 2016-03-03 20:23:07 -05:00
Efraim Flashner
50b66bf1b0 gnu: youtube-dl: Update to 2016.03.01. 
* gnu/packages/video.scm (youtube-dl): Update to 2016.03.01.
 2016-03-03 22:55:46 +02:00
Efraim Flashner
581873b55d gnu: mpv: Update to 0.16.0. 
* gnu/packages/video.scm (mpv): Update to 0.16.0.
 2016-03-03 22:53:37 +02:00
Leo Famulari
d8173f21f7 gnu: perl: Replace with patched version [fixes CVE-2016-2381]. 
* gnu/packages/patches/perl-CVE-2016-2381.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/perl.scm (perl)[replacement]: New field.
(perl-fixed): New variable.
* gnu/packages/commencement.scm (perl-boot0)[replacement]: New field.
 2016-03-03 14:56:23 -05:00
Efraim Flashner
7b3f2682de gnu: irssi: Support proxy, socks, bot. 
* gnu/packages/irc.scm (irssi)[arguments]: Add configure flags to
support proxy, socks and bot.
 2016-03-03 19:04:31 +02:00
Efraim Flashner
fd41741bdc gnu: irssi: Update to 0.8.18. 
* gnu/packages/irc.scm (irssi): Update to 0.8.18.
[source]: Update uri.
 2016-03-03 19:04:31 +02:00
Petter
d0a65256a3 system: GRUB menu entry says "beta" instead of "alpha" 
* gnu/system.scm (kernel->grub-label): Change "alpha" to "beta'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-03-03 17:42:47 +01:00
Ludovic Courtès
16cc99610d system: Add rfkill to '%base-packages'. 
* gnu/system.scm (%base-packages): Add RFKILL.
 2016-03-03 17:42:47 +01:00
Ricardo Wurmus
649e9b3b47 gnu: python-pysam: Move cython and setuptools to native inputs. 
* gnu/packages/bioinformatics.scm (python-pysam)[inputs]: Move
"python-cython" and "python-setuptools" from here...
[native-inputs]: ... to here.
 2016-03-03 13:47:19 +01:00
Ricardo Wurmus
3acb8c857c gnu: deeptools: Update to 2.1.1. 
* gnu/packages/bioinformatics.scm (deeptools): Update to 2.1.1.
[inputs]: Add "python2-numpydoc" and "python2-pybigwig".
 2016-03-03 13:47:12 +01:00
Ricardo Wurmus
14bda1ff49 gnu: deeptools: Change "propagated-inputs" to "inputs". 
* gnu/packages/bioinformatics.scm (deeptools)[propagated-inputs]: Move
all inputs from here...
[inputs]: ...to here.
 2016-03-03 13:47:02 +01:00
Ricardo Wurmus
69e0e03c36 gnu: Add python-pybigwig. 
* gnu/packages/bioinformatics.scm (python-pybigwig, python2-pybigwig):
  New variables.
 2016-03-03 13:46:52 +01:00
Ricardo Wurmus
d454640c38 gnu: python-pysam: Update to 0.8.4. 
* gnu/packages/bioinformatics.scm (python-pysam): Update to 0.8.4.
 2016-03-03 13:46:39 +01:00
Ricardo Wurmus
55a9a8c2b9 gnu: python-pysam, python2-pysam: Move to bioinformatics.scm. 
* gnu/packages/python.scm (python-pysam, python2-pysam): Move to...
* gnu/packages/bioinformatics.scm (python-pysam, python2-pysam):
  ...here.
 2016-03-03 13:46:26 +01:00
Lukas Gradl
e90819c40a gnu: Add procmail. 
* gnu/packages/patches/procmail-ambiguous-getline-debian.patch: New file.
 * gnu-system.am (dist_patch_DATA): Add it.
 * gnu/packages/mail.scm (procmail): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-03-02 20:44:18 -05:00
Mathieu Lirzin
1b846da8c3 utils: Use '@' for separating package names and version numbers. 
This provides the ability to use numbers in package names.

Fixes <http://bugs.gnu.org/19219>.

* guix/utils.scm (package-name->name+version): New procedure.
* gnu/packages.scm (%find-package): Add a FALLBACK? keyword argument.
Use the previous method when no package is found.
(specification->package+output, specification->package): Adapt
documentation to new syntax.
* doc/guix.texi (Invoking guix package, Invoking guix import): Likewise.
* guix/ui.scm (package-specification->name+version+output): Likewise.
* guix/scripts/import/hackage.scm (show-help): Likewise.
* tests/guix-build.sh: Adapt to new syntax.
* tests/guix-lint.sh: Likewise.
* tests/guix-package.sh: Likewise.
* tests/ui.scm ("package-specification->name+version+output"): Likewise.
* tests/utils.scm ("package-name->name+version"): Likewise.
* NEWS: Mention new syntax.
 2016-03-02 21:41:41 +01:00
Mathieu Lirzin
fad155d47e packages: Factorize package specification search. 
* gnu/packages.scm (%find-package): New procedure.
(specification->package, specification->package+output): Use it.
 2016-03-02 21:41:41 +01:00
Mark H Weaver
b134a80c36 gnu: icecat: Update bundled graphite2 to 1.3.6 [unspecified security fixes]. 
* gnu/packages/patches/icecat-update-graphite2-pt2.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/gnuzilla.scm (icecat)[source]: Add patch.
 2016-03-02 15:13:15 -05:00
Mark H Weaver
bd009cd95d gnu: nss: Update to 3.21.1. 
* gnu/packages/gnuzilla.scm (nss): Update to 3.21.1.
 2016-03-02 15:13:14 -05:00
Mark H Weaver
d47ad0890c gnu: graphite2: Replace with 1.3.6 [unspecified security fixes]. 
See <https://bodhi.fedoraproject.org/updates/FEDORA-2016-dec1faadc5>

* gnu/packages/fontutils.scm (graphite2)[replacement]: New field.
(graphite2-1.3.6): New variable.
 2016-03-02 15:12:18 -05:00
Jessica Tallon
c285a400a2 gnu: Add password-store. 
* gnu/packages/password-utils.scm (password-store): New variable.

Co-authored-by: Andreas Enge <andreas@enge.fr>
Co-authored-by: Leo Famulari <leo@famulari.name>
 2016-03-02 14:18:51 -05:00
Roel Janssen
dd6e70f920 gnu: Add cppcheck. 
* gnu/packages/check.scm (cppcheck): New variable.
 2016-03-02 15:17:56 +01:00
Mark H Weaver
ed742bc4b4 gnu: openssl: Enable ssl2 at build time to ensure ABI compatible graft. 
Fixes <https://debbugs.gnu.org/22876>
Reported by Christopher Allan Webber <cwebber@dustycloud.org>.

* gnu/packages/tls.scm (openssl-1.0.2g)[arguments]: Override the inherited
  'configure' phase to add "enable-ssl2" as an argument to ./config.
 2016-03-02 01:58:42 -05:00
宋文武
6150b5c780 gnu: xfce: Don't wrap 'startxfce4'. 
The necessary environment variables are set by 'etc/profile' now.

* gnu/packages/xfce.scm (xfce)[build-system]: Use 'trivial-build-system'.
[arguments]: Simplify.
 2016-03-02 08:32:47 +08:00
Leo Famulari
5e8276dcf4 gnu: ilmbase: Add patch to fix build on i686. 
Fixes <http://bugs.gnu.org/22049>.

* gnu/packages/patches/ilmbase-fix-tests.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/graphics.scm (ilmbase)[source]: Add patch.
 2016-03-01 19:08:31 -05:00
Leo Famulari
88ccca45f6 gnu: openssh: Update to 7.2p1. 
* gnu/packages/ssh.scm (openssh): Update to 7.2p1.
 2016-03-01 16:32:41 -05:00
Leo Famulari
599860d2b9 gnu: libressl: Update to 2.2.6. 
* gnu/packages/tls.scm (libressl): Update to 2.2.6.
 2016-03-01 16:30:13 -05:00
Leo Famulari
043c3f0bed gnu: parallel: Update to 20160222. 
* gnu/packages/parallel.scm (parallel): Update to 20160222.
 2016-03-01 15:15:38 -05:00
Pjotr Prins
f82c8c3cba gnu: r-go-db: Bioconductor changed URL for data downloads. 
* gnu/packages/bioinformatics.scm (r-go-db)[source]: Update data URL.
 2016-03-01 19:47:26 +02:00
Pjotr Prins
27acfaea4c gnu: r-iranges: Update to 2.4.8. 
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.4.8.
 2016-03-01 19:47:26 +02:00
Pjotr Prins
8921841da8 gnu: r-s4vectors: Update to 0.8.11. 
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.8.11.
 2016-03-01 19:47:25 +02:00
Pjotr Prins
b70fa3c7f7 gnu: r-ggplot2: Update to 2.0.0. 
* gnu/packages/statistics.scm (r-ggplot2): Update to 2.0.0.
 2016-03-01 19:47:24 +02:00
Ludovic Courtès
caeadfddb0 gnu: openssl: Replace with 1.0.2g [fixes CVE-2016-{0800,0705,0798,0797,0799,0702,0703,0704}]. 
See <http://openssl.org/news/secadv/20160301.txt>.
Also fixes <http://bugs.gnu.org/22831>.

* gnu/packages/patches/openssl-c-rehash-in.patch: New file.
* gnu/packages/tls.scm (openssl)[replacement]: New field.
(openssl-1.0.2g): New variable.
 2016-03-01 16:00:46 +01:00
Efraim Flashner
d06fc008bd gnu: tiled: Use 'modify-phases'. 
* gnu/packages/game-development.scm (tiled)[arguments]: Use 'modify-phases'.
 2016-03-01 14:55:55 +02:00
Efraim Flashner
e8ea01d902 gnu: tiled: Update to 0.15.1. 
* gnu/packages/game-development.scm (tiled): Update to 0.15.1.
 2016-03-01 14:55:55 +02:00
Ricardo Wurmus
d1e32822b4 gnu: Add PePr. 
* gnu/packages/bioinformatics.scm (pepr): New variable.
 2016-03-01 11:51:24 +01:00
Ricardo Wurmus
d29150b55d gnu: Add bwa-pssm. 
* gnu/packages/bioinformatics.scm (bwa-pssm): New variable.
 2016-03-01 10:31:04 +01:00
Ricardo Wurmus
b4464d384c gnu: Add gdsl. 
* gnu/packages/datastructures.scm (gdsl): New variable.
 2016-03-01 10:30:04 +01:00
Efraim Flashner
e288f0075c gnu: weechat: Move to irc.scm. 
* gnu/packages/weechat.scm (weechat): Move from here ...
* gnu/packages/irc.scm (weechat): ... to here.
* gnu/packages/weechat.scm: Delete file.
* gnu-system.am (GNU_SYSTEM_MODULES): Remove weechat.scm.
 2016-03-01 11:09:32 +02:00
Efraim Flashner
a61bd6a5e3 gnu: irssi: Use 'modify-phases'. 
* gnu/packages/irc.scm (irssi)[arguments]: Use 'modify-phases'.
 2016-03-01 11:09:32 +02:00
Efraim Flashner
27930f853d gnu: irssi: Move to irc.scm. 
* gnu/packages/irssi.scm (irssi): Move from here ...
* gnu/packages/irc.scm (irssi): ... to here.
* gnu/packages/irssi.scm: Delete file.
* gnu-system.am (GNU_SYSTEM_MODULES): Remove irssi.scm.
 2016-03-01 11:09:32 +02:00
Efraim Flashner
980f058d92 gnu: Add quassel. 
* gnu/packages/irc.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Register it.
 2016-03-01 11:09:32 +02:00
Efraim Flashner
550791b8f1 gnu: Add snorenotify. 
* gnu/packages/kde.scm (snorenotify): New variable.
 2016-03-01 11:09:32 +02:00
Efraim Flashner
d34c594aeb gnu: Add qca. 
* gnu/packages/kde.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Register it.
 2016-03-01 11:09:32 +02:00
Efraim Flashner
d8ea278204 gnu: Add oxygen-icons. 
* gnu/packages/kde-frameworks.scm (oxygen-icons): New variable.
 2016-03-01 11:09:32 +02:00
Manolis Ragkousis
fea1f275bc gnu: Add desmume. 
* gnu/packages/games.scm (desmume): New variable.
 2016-02-29 22:04:53 -05:00
Mark H Weaver
8d5ceb120d gnu: curl: Use updated libssh2 [fixes CVE-2016-7087]. 
* gnu/packages/curl.scm (curl)[inputs]: Use libssh2.
* gnu/packages/ssh.scm (libssh2-1.4): Remove variable.
 2016-02-29 20:09:29 -05:00
Christopher Allan Webber
aa5946edb2 gnu: Remove python2-pil. 
python2-pil is vulnerable to several security issues (CVE-2016-0740,
CVE-2016-0775, and CVE-2016-2533).  Fortunately, python2-pillow provides
equivalent functionality, so this package can be cleanly removed.

* gnu/packages/python.scm (python2-pil): Remove variable.
 2016-02-29 15:01:20 -08:00
Ricardo Wurmus
daeb61f7a9 gnu: guile-for-guile-emacs: Use guile-2.0 search paths. 
* gnu/packages/guile.scm (guile-for-guile-emacs)[native-search-paths]:
  Use the same search paths as guile-2.0.
 2016-02-29 07:10:40 +01:00
Leo Famulari
823e2ed4b3 gnu: msmtp: Install msmtpq. 
* gnu/packages/mail.scm (msmtp)[arguments]: Install msmtpq scripts.
 2016-02-28 22:06:24 -05:00
Ludovic Courtès
1a59b6d014 gnu: git: Install symlinks instead of hard links. 
This reduces nar size by a factor of 10.
Fixes <http://bugs.gnu.org/21949>.

* gnu/packages/version-control.scm (git)[arguments]: Pass
NO_INSTALL_HARDLINKS as #:make-flags.
 2016-02-28 16:41:53 +01:00
Andreas Enge
dbb7a08175 gnu: libwnck: Rename variable for GTK+ 2 variant. 
* gnu/packages/gnome.scm (libwnck-1): Rename this...
  (libwnck-2): ...to this.
* gnu/packages/xfce.scm (xfce4-panel, xfce4-xkb-plugin, xfce4-session,
  xfwm4, xfdesktop)[inputs]: Adapt.
 2016-02-28 15:59:56 +01:00
Efraim Flashner
2236da6e97 gnu: xrandr: Update to 1.5.0. 
* gnu/packages/xorg.scm (xrandr): Update to 1.5.0.
 2016-02-28 14:13:30 +02:00
Efraim Flashner
97a0859593 gnu: libqmi: Update to 1.12.8. 
* gnu/packages/freedesktop.scm (libqmi): Update to 1.12.8.
 2016-02-28 13:42:34 +02:00
Efraim Flashner
9012e118ff gnu: wayland: Update to 1.10.0. 
* gnu/packages/freedesktop.scm (wayland): Update to 1.10.0.
[arguments]: Disable parallel tests.
 2016-02-28 13:32:52 +02:00
Efraim Flashner
d3e3d7f02a gnu: libinput: Update to 1.2.0. 
* gnu/packages/freedesktop.scm (libinput): Update to 1.2.0.
 2016-02-28 13:08:08 +02:00
Efraim Flashner
a724924beb gnu: python-tornado: Update to 4.3. 
* gnu/packages/python.scm (python-tornado): Update to 4.3.
[native-inputs]: Add python-backports-abc.
(python2-tornado)[inputs]: Add python2-singledispatch.
 2016-02-28 10:53:42 +02:00
Efraim Flashner
6b59fc1020 gnu: Add python-backports-abc. 
* gnu/packages/python.scm (python-backports-abc): New variable.
 2016-02-28 10:53:35 +02:00
Mark H Weaver
9579118922 gnu: bitlbee: Update to 3.4.1. 
* gnu/packages/patches/bitlbee-configure-doc-fix.patch: Delete file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/messaging.scm (bitlbee): Update to 3.4.1.
[source]: Remove patch.
 2016-02-27 21:10:56 -05:00
Tobias Geerinckx-Rice
9c7f7e2da9 gnu: btrfs-progs: Update to 4.4.1. 
* gnu/packages/linux.scm (btrfs-progs): Update to 4.4.1.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2016-02-27 22:39:51 +02:00
Ricardo Wurmus
a003b5b650 gnu: scribus: Update to 1.5.1. 
* gnu/packages/scribus.scm (scribus): Update to 1.5.1.
[source]: Remove patch.
* gnu/packages/patches/scribus-qobject.patch: Delete file.
* gnu-system.am (dist_patch_DATA): Remove it.
 2016-02-27 16:34:20 +01:00
Ricardo Wurmus
b951e26fe5 gnu: arandr: Add "xrandr" to inputs. 
* gnu/packages/xdisorg.scm (arandr)[inputs]: Add "xrandr".
[arguments]: Add build phase "make-xrandr-available" to ensure "xrandr"
executable is found at runtime.
 2016-02-27 16:25:26 +01:00
Mark H Weaver
b35461748b gnu: Fix misplaced commas (unquote). 
Fix many occurrences of comma (unquote) being placed immediately after the
previous list item, e.g. ("ncurses", ncurses) in the inputs.

* gnu/packages/base.scm (patch, gnu-make),
  gnu/packages/bioinformatics.scm (hmmer),
  gnu/packages/bittorrent.scm (aria2),
  gnu/packages/compression.scm (pbzip2),
  gnu/packages/databases.scm (recutils),
  gnu/packages/fonts.scm (font-terminus),
  gnu/packages/freedesktop.scm (xdg-utils, elogind),
  gnu/packages/games.scm (gnujump),
  gnu/packages/gnome.scm (libidl, gnumeric, eog, gedit),
  gnu/packages/gnunet.scm (gnunet),
  gnu/packages/gnuzilla.scm (mozjs, nspr),
  gnu/packages/gtk.scm (gtksourceview, gdk-pixbuf),
  gnu/packages/lua.scm (lua),
  gnu/packages/openstack.scm (python-swiftclient),
  gnu/packages/perl.scm (perl-json-any),
  gnu/packages/polkit.scm (polkit-qt),
  gnu/packages/python.scm (wrap-python3, python-oauthlib)
  (python-mccabe-0.2.1, python-contextlib2, python2-rauth),
  gnu/packages/qt.scm (qtkeychain),
  gnu/packages/ruby.scm (ruby-nokogiri),
  gnu/packages/screen.scm (screen),
  gnu/packages/ssh.scm (libssh),
  gnu/packages/video.scm (ffmpeg, mplayer),
  gnu/packages/vim.scm (vim),
  gnu/packages/xdisorg.scm (redshift),
  gnu/packages/xfce.scm (xfce4-panel, xfce4-settings),
  gnu/packages/xnee.scm (xnee),
  gnu/packages/xorg.scm (font-adobe100dpi, font-adobe75dpi),
  gnu/packages/zsh.scm (zsh): Fix misplaced commas (unquote).
 2016-02-27 08:49:26 -05:00
Ricardo Wurmus
48766ea85f gnu: Add emacs-god-mode. 
* gnu/packages/emacs.scm (emacs-god-mode): New variable.
 2016-02-27 13:50:18 +01:00
Ricardo Wurmus
048bfba163 gnu: Add gtklick. 
* gnu/packages/music.scm (gtklick): New variable.
 2016-02-27 12:27:21 +01:00
Ricardo Wurmus
6ab4712d6e gnu: python2-pygtk: Add libglade to inputs. 
* gnu/packages/gtk.scm (python2-pygtk)[inputs]: Add "libglade".
 2016-02-27 12:27:21 +01:00
Ricardo Wurmus
a91d72e23a gnu: Add pyliblo. 
* gnu/packages/audio.scm (python-pyliblo, python2-pyliblo): New
  variables.
 2016-02-27 12:27:21 +01:00
Mark H Weaver
b460a99890 gnu: linux-libre-4.1: Update to 4.1.18. 
* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.18.
 2016-02-27 02:36:16 -05:00
Mark H Weaver
3dad786b64 gnu: linux-libre: Update to 4.4.3. 
* gnu/packages/linux.scm (linux-libre): Update to 4.4.3.
 2016-02-27 02:36:10 -05:00
Mark H Weaver
4ed737b2ab gnu: gtk-doc: Improve fix-docbook phase. 
* gnu/packages/gtk.scm (gtk-doc)[arguments]: In the 'fix-docbook' phase,
avoid hard-coding the docbook-xsl version number, and return #t.
 2016-02-25 22:24:32 -05:00
Danny Milosavljevic
b31fbea566 gnu: Add python-psycopg2. 
* gnu/packages/python.scm (python-psycopg2, python2-psycopg2): New variables.
 2016-02-25 14:35:28 -08:00
Leo Famulari
7dd21101a3 gnu: diffoscope: Update to 49. 
* gnu/packages/package-management.scm (diffoscope): Update to 49.
[source]: Use pypi-uri.
[arguments]: Use python-3. Enable tests. Add 'dependency-on-python-magic' phase
and remove 'dependency-on-rpm' phase.
[native-inputs]: Remove python2-setuptools.
[inputs]: Replace python2-file, python2-debian, python2-libarchive-c,
python2-tlsh, python2-pytest, python2-chardet with python-3 variants.
 2016-02-25 17:06:25 -05:00
Rene Saavedra
66d59111e3 gnu: Add dconf-editor. 
* gnu/packages/gnome.scm (dconf-editor): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-02-25 16:36:10 -05:00
Andy Wingo
735e84c7bd gnu: libx264: Change source URL to HTTP. 
* gnu/packages/video.scm (libx264): Download via HTTP.  The videolan ftp
  server does not work with IPv6.
 2016-02-25 22:33:40 +01:00
Andy Wingo
b4787e71ac gnu: gtk-doc: Fix build. 
* gnu/packages/gtk.scm (gtk-doc): Fix build.
 2016-02-25 22:33:20 +01:00
Efraim Flashner
2865c81c71 gnu: youtube-dl: Update to 2016.02.22. 
* gnu/packages/video.scm (youtube-dl): Update to 2016.02.22.
 2016-02-25 22:54:03 +02:00
Efraim Flashner
eb6e2e812a gnu: python-decorator: Update to 4.0.9. 
* gnu/packages/python.scm (python-decorator): Update to 4.0.9.
 2016-02-25 21:05:37 +02:00
Efraim Flashner
cc0c4fdedd gnu: python-traitlets: Update to 4.1.0. 
* gnu/packages/python.scm (python-traitlets): Update to 4.1.0.
[native-inputs]: Add python-mock.
 2016-02-25 21:05:37 +02:00
Efraim Flashner
c6ebd40da1 gnu: python-mccabe: Update to 0.4.0. 
* gnu/packages/python.scm (python-mccabe): Update to 0.4.0.
[inputs]: Add python-pytest, python-pytest-runner.
(python-mccabe-0.2.1)[inputs]: Only use python-setuptools.
 2016-02-25 21:05:37 +02:00
Efraim Flashner
43789136d2 gnu: python-flake8: Update to 2.5.4. 
* gnu/packages/python.scm (python-flake8): Update to 2.5.4.
[inputs]: Use recent python-pep8, python-pyflakes.
 2016-02-25 21:05:37 +02:00
Efraim Flashner
db251311cf gnu: python-pep8: Update to 1.7.0. 
* gnu/packages/python.scm (python-pep8): Update to 1.7.0.
 2016-02-25 21:05:37 +02:00
Efraim Flashner
a4d9609c98 gnu: python-networkx: Update to 1.11. 
* gnu/packages/python.scm (python-networkx): Update to 1.11.
 2016-02-25 21:05:37 +02:00
Efraim Flashner
6f068e081b gnu: python-hypothesis: Update to 3.0.4. 
* gnu/packages/python.scm (python-hypothesis): Update to 3.0.4.
[native-inputs]: Remove python-setuptools.
(python2-hypothesis): Use 'strip-python2-variant'.
[native-inputs]: Add python2-enum34, python2-setuptools.
 2016-02-25 21:05:37 +02:00
Efraim Flashner
fee04c198c gnu: python-html5lib: Update to 1.0b8. 
* gnu/packages/python.scm (python-html5lib): Update to 1.0b8.
 2016-02-25 21:05:37 +02:00
Efraim Flashner
b6785c2e3a gnu: python-isodate: Update to 0.5.4. 
* gnu/packages/python.scm (python-isodate): Update to 0.5.4.
 2016-02-25 21:05:37 +02:00
Efraim Flashner
9d813ec147 gnu: python-wsgi-intercept: Update to 1.1.2. 
* gnu/packages/python.scm (python-wsgi-intercept): Update to 1.1.2.
[native-inputs]: Add python-six.
 2016-02-25 21:05:37 +02:00
Efraim Flashner
29f20168cf gnu: python-pytest-localserver: Update to 0.3.5. 
* gnu/packages/python.scm (python-pytest-localserver): Update to 0.3.5.
 2016-02-25 21:05:37 +02:00
Efraim Flashner
da8b011d2a gnu: python-requests-toolbelt: Update to 0.6.0. 
* gnu/packages/python.scm (python-requests-toolbelt): Update to 0.6.0.
 2016-02-25 21:05:37 +02:00
Efraim Flashner
74a066f9a0 gnu: python-requests: Update to 2.9.1. 
* gnu/packages/python.scm (python-requests): Update to 2.9.1.
 2016-02-25 21:05:37 +02:00
Efraim Flashner
40981b5c18 gnu: python-wheel: Update to 0.29.0. 
* gnu/packages/python.scm (python-wheel): Update to 0.29.0.
 2016-02-25 21:05:37 +02:00
Christopher Allan Webber
a8f20f63dc gnu: Add python-pastescript. 
* gnu/packages/python.scm (python-pastescript, python2-pastescript):
  New variables.
 2016-02-25 11:01:56 -08:00
Christopher Allan Webber
c4a7904c21 gnu: Add python-paste. 
* gnu/packages/python.scm (python-paste, python2-paste): New variables.
* gnu/packages/patches/python-paste-remove-timing-test.patch: New file.
* gnu/packages/patches/python-paste-remove-website-test.patch: New file.
* gnu-system.am (dist_patch_DATA): Add them.
 2016-02-25 11:01:45 -08:00
Mark H Weaver
e62b5c6903 Merge branch 'media-updates' 2016-02-25 13:50:19 -05:00
Ludovic Courtès
736f9ffce2 gnu: Add missing import in bioinformatics.scm. 
This is a followup to 1baee94.

* gnu/packages/bioinformatics.scm: Add missing import.
 2016-02-25 12:48:08 +01:00
Nils Gillmann
a65e2a02fc gnu: Add kyotocabinet. 
* gnu/packages/databases.scm (kyotocabinet): New variable.
 2016-02-25 11:56:00 +01:00
Ricardo Wurmus
1baee943ca gnu: Add libBigWig. 
* gnu/packages/bioinformatics.scm (libbigwig): New variable.
 2016-02-25 11:43:44 +01:00
Jan Nieuwenhuizen
1644f0cd87 gnu: guile-json: Update to 0.5.0. 
* gnu/packages/guile.scm (guile-json): Update to 0.5.0.

Signed-off-by: Andreas Enge <andreas@enge.fr>
 2016-02-25 09:19:30 +01:00
Ricardo Wurmus
b16043a361 gnu: ardour: Update to 4.7. 
* gnu/packages/audio.scm (ardour): Update to 4.7.
 2016-02-25 09:17:35 +01:00
宋文武
f072e9adf5 gnu: xdg-utils: Propagate xprop and xset. 
Fixes <http://bugs.gnu.org/22755>.

* gnu/packages/freedesktop.scm (xdg-utils): Propagate xprop and xset.
 2016-02-25 08:54:42 +08:00
Leo Famulari
85267efb2a gnu: libssh: Update to 0.7.3 [fixes CVE-2016-0739]. 
* gnu/packages/patches/libssh-CVE-2014-0017.patch: Delete file.
* gnu/packages/patches/libssh-0.6.5-CVE-2016-0739.patch: New file.
* gnu-system.am (dist_patch_DATA): Adjust accordingly.
* gnu/packages/ssh.scm (libssh): Update to 0.7.3.
  (libssh-0.5): Rename to...
  (libssh-0.6): ... this.  Update to 0.6.5.
  [source]: Add patch for CVE-2016-0739.
  (guile-ssh)[inputs]: Use libssh-0.6.

Modified-By: Mark H Weaver <mhw@netris.org>
 2016-02-24 16:32:09 -05:00
Leo Famulari
78d80c5c6a gnu: libssh2: Update to 1.7.0 [fixes CVE-2016-0787]. 
* gnu/packages/ssh.scm (libssh2): Update to 1.7.0.
  (libssh2-1.4): New variable.
* gnu/packages/curl.scm (curl)[inputs]: Use libssh4-1.4.

Modified-By: Mark H Weaver <mhw@netris.org>
 2016-02-24 16:32:08 -05:00
Mark H Weaver
bf6996c9cf gnu: xf86-video-intel: Update to 2.99.917-1-d167280. 
* gnu/packages/xorg.scm (xf86-video-intel): Update to 2.99.917-1-d167280.
 2016-02-24 13:56:57 -05:00
Efraim Flashner
a49332a0c0 gnu: gdb: Update to 7.11. 
* gnu/packages/gdb.scm (gdb): Update to 7.11.
 2016-02-24 20:52:12 +02:00
Efraim Flashner
c73210d7a9 gnu: kde-frameworks: Update to 5.19.0. 
* gnu/packages/kde-frameworks.scm (kwindowsystem): Update to 5.19.0.
(extra-cmake-modules): Update to 5.19.0.
 2016-02-24 20:25:25 +02:00
Andy Wingo
79fd74facd gnu: services: Start X with -configdir. 
* gnu/services/xorg.scm (%default-xorg-modules): New public variable.
(xorg-configuration-directory): New function.
(xorg-start-command): Add #:modules keyword argument, defaulting to
%default-xorg-modules.  Build an xorg.conf.d directory from those
modules, and pass it to X via the -configdir parameter.
 2016-02-24 11:49:57 -05:00
Andy Wingo
d0a6437f7d gnu: libxaw: Update to 1.0.13. 
* gnu/packages/xorg.scm (libxaw): Update to 1.0.13.
 2016-02-24 11:49:57 -05:00
Andy Wingo
ea9763dae0 gnu: libxt: Update to 1.1.5. 
* gnu/packages/xorg.scm (libxt): Update to 1.1.5.
 2016-02-24 11:49:57 -05:00
Andy Wingo
f1aeae762d gnu: libx11: Update to 1.6.3. 
* gnu/packages/xorg.scm (libx11): Update to 1.6.3.
 2016-02-24 11:49:57 -05:00
Andy Wingo
0eae6b2d91 gnu: xorg-server: Update to 1.18.1. 
* gnu/packages/xorg.scm (xorg-server): Update to 1.18.1.
 2016-02-24 11:49:57 -05:00
Andy Wingo
7606baa8f9 gnu: libxxf86vm: Update to 1.1.4. 
* gnu/packages/xorg.scm (libxxf86vm): Update to 1.1.4.
 2016-02-24 11:49:57 -05:00
Andy Wingo
9a5f739ef8 gnu: libxvmc: Update to 1.0.9. 
* gnu/packages/xorg.scm (libxvmc): Update to 1.0.9.
 2016-02-24 11:49:57 -05:00
Andy Wingo
61f29af1db gnu: libxrandr: Update to 1.5.0. 
* gnu/packages/xorg.scm (libxrandr): Update to 1.5.0.
 2016-02-24 11:49:57 -05:00
Andy Wingo
d51b8529e6 gnu: libxi: Update to 1.7.6. 
* gnu/packages/xorg.scm (libxi): Update to 1.7.6.
 2016-02-24 11:49:57 -05:00
Andy Wingo
10d85db449 gnu: xproto: Update to 7.0.28. 
* gnu/packages/xorg.scm (xproto): Update to 7.0.28.
 2016-02-24 11:49:57 -05:00
Andy Wingo
6fad350498 gnu: libxrender: Update to 0.9.9. 
* gnu/packages/xorg.scm (libxrender): Update to 0.9.9.
 2016-02-24 11:49:57 -05:00