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Author SHA1 Message Date
Efraim Flashner
c805bdd550
gnu: rust-winapi-0.3: Adjust for new build system. 
* gnu/packages/crates-io.scm (rust-winapi-0.3)[inputs]: Add
rust-winapi-i686-pc-windows-gnu, rust-winapi-x86-64-pc-windows-gnu.
 2021-03-15 15:53:14 +02:00
Efraim Flashner
12c699572c
gnu: rust-pkg-config-0.3: Hardcode location of pkg-config. 
* gnu/packages/crates-io.scm (rust-pkg-config-0.3)[arguments]: Add phase
to hardcode location of pkg-config binary.
 2021-03-15 15:53:14 +02:00
Efraim Flashner
d499911432
gnu: rust-pkg-config-0.3: Update to 0.3.19. 
* gnu/packages/crates-io.scm (rust-pkg-config-0.3): Update to 0.3.19.
 2021-03-15 15:53:14 +02:00
Efraim Flashner
4363b542f2
gnu: rust-wayland-sys-0.28: Adapt for new build system. 
* gnu/packages/crates-graphics.scm (rust-wayland-sys-0.28)[arguments]:
Don't skip build. Add phase to refer explicitly to wayland libraries.
[inputs]: Add rust-dlib-0.4, rust-lazy-static-1, rust-libc-0.2,
rust-pkg-config-0.3.
[propagated-inputs]: Add wayland.
(rust-wayland-sys-0.23): Adjust accordingly.
 2021-03-15 15:53:14 +02:00
Efraim Flashner
69c757c45a
gnu: rust-quote-1: Update to 1.0.9. 
* gnu/packages/crates-io.scm (rust-quote-1): Update to 1.0.9.
 2021-03-15 15:53:14 +02:00
Efraim Flashner
78e7e178a3
build-system/cargo: Don't clobber packaged crates while building. 
This fixes an issue where two packages share a common dependent.

* guix/build/cargo-build-system.scm (unpack-rust-crates): Only copy rust
crates into the target directory if there isn't one already there with
the same name.
 2021-03-15 15:53:11 +02:00
zimoun
bf612ead76
gnu: r-variantannotation: Move to (gnu packages bioconductor). 
* gnu/packages/bioinformatics.scm (r-variantannotation): Move from here...
* gnu/packages/bioconductor.scm (r-variantannotation): ...to here.
 2021-03-15 14:06:24 +01:00
zimoun
082f3c5433
gnu: r-edger: Move to (gnu packages bioconductor). 
* gnu/packages/bioinformatics.scm (r-edger): Move from here...
* gnu/packages/bioconductor.scm (r-edger): ...to here.
 2021-03-15 14:06:16 +01:00
zimoun
35b62c044e
gnu: r-genomeinfodb: Move to (gnu packages bioconductor). 
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Move from here...
* gnu/packages/bioconductor.scm (r-genomeinfodb): ...to here.
 2021-03-15 14:05:56 +01:00
zimoun
8d6d75ff39
gnu: r-genomeinfodbdata: Move to (gnu packages bioconductor). 
* gnu/packages/bioinformatics.scm (r-genomeinfodbdata): Move from here...
* gnu/packages/bioconductor.scm (r-genomeinfodbdata): ...to here.
[source]: Use 'bioconductor-uri'.
 2021-03-15 14:05:47 +01:00
zimoun
9949f459bf
gnu: r-iranges: Move to (gnu packages bioconductor). 
* gnu/packages/bioinformatics.scm (r-iranges): Move from here...
* gnu/packages/bioconductor.scm (r-iranges): ...to here.
 2021-03-15 14:05:37 +01:00
zimoun
d64e3a487b
gnu: r-s4vectors: Move to (gnu packages bioconductor). 
* gnu/packages/bioinformatics.scm (r-s4vectors): Move from here...
* gnu/packages/bioconductor.scm (r-s4vectors): ...to here.
 2021-03-15 14:05:27 +01:00
zimoun
852fa82d4c
gnu: r-bioccheck: Move to (gnu packages bioconductor). 
* gnu/packages/bioinformatics.scm (r-bioccheck): Move from here...
* gnu/packages/bioconductor.scm (r-bioccheck): ...to here.
 2021-03-15 14:05:22 +01:00
zimoun
d5576b6eb7
gnu: r-grohmm: Move to (gnu packages bioconductor). 
* gnu/packages/bioinformatics.scm (r-grohmm): Move from here...
* gnu/packages/bioconductor.scm (r-grohmm): ...to here.
 2021-03-15 14:04:26 +01:00
zimoun
5ac55aea8b
gnu: r-biocstyle: Move to (gnu packages bioconductor). 
* gnu/packages/bioinformatics.scm (r-biocstyle): Move from here...
* gnu/packages/bioconductor.scm (r-biocstyle): ...to here.
 2021-03-15 14:03:21 +01:00
zimoun
134404b437
gnu: r-biocviews: Move to (gnu packages bioconductor). 
* gnu/packages/bioinformatics.scm (r-biocviews): Move from here...
* gnu/packages/bioconductor.scm (r-biocviews): ...to here.
 2021-03-15 14:03:18 +01:00
Ricardo Wurmus
53dff6ac8f
gnu: r-rsqlite: Update to 2.2.4. 
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.2.4.
 2021-03-15 13:45:31 +01:00
Ricardo Wurmus
2e2cc58681
gnu: r-rcpparmadillo: Update to 0.10.2.2.0. 
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.10.2.2.0.
 2021-03-15 13:45:31 +01:00
Ricardo Wurmus
2fc2983e59
gnu: r-formatr: Update to 1.8. 
* gnu/packages/statistics.scm (r-formatr): Update to 1.8.
[native-inputs]: Add r-knitr.
 2021-03-15 13:45:31 +01:00
Ricardo Wurmus
fe903cb89d
gnu: r-survival: Update to 3.2-9. 
* gnu/packages/statistics.scm (r-survival): Update to 3.2-9.
 2021-03-15 13:45:31 +01:00
Ricardo Wurmus
bbc542b53c
gnu: r-textshaping: Update to 0.3.2. 
* gnu/packages/cran.scm (r-textshaping): Update to 0.3.2.
 2021-03-15 13:45:31 +01:00
Ricardo Wurmus
ea23f17ece
gnu: r-mlr3tuning: Update to 0.8.0. 
* gnu/packages/cran.scm (r-mlr3tuning): Update to 0.8.0.
 2021-03-15 13:45:31 +01:00
Ricardo Wurmus
921ecdba7c
gnu: r-bbotk: Update to 0.3.1. 
* gnu/packages/cran.scm (r-bbotk): Update to 0.3.1.
 2021-03-15 13:45:31 +01:00
Ricardo Wurmus
ee92bb9004
gnu: r-workflows: Update to 0.2.2. 
* gnu/packages/cran.scm (r-workflows): Update to 0.2.2.
[propagated-inputs]: Add r-vctrs.
 2021-03-15 13:45:31 +01:00
Ricardo Wurmus
e4d4046999
gnu: r-spatstat: Update to 2.0-1. 
* gnu/packages/cran.scm (r-spatstat): Update to 2.0-1.
[propagated-inputs]: Remove r-abind, r-deldir, r-goftest, r-matrix, r-mgcv,
r-nlme, r-polyclip, r-rpart, and r-tensor; add r-spatstat-core,
r-spatstat-geom, and r-spatstat-linnet.
 2021-03-15 13:45:31 +01:00
Ricardo Wurmus
b0036b407c
gnu: r-brms: Update to 2.15.0. 
* gnu/packages/cran.scm (r-brms): Update to 2.15.0.
 2021-03-15 13:45:30 +01:00
Ricardo Wurmus
7bd5a64303
gnu: r-forecast: Update to 8.14. 
* gnu/packages/cran.scm (r-forecast): Update to 8.14.
 2021-03-15 13:45:30 +01:00
Ricardo Wurmus
58a2c438d3
gnu: r-lavaan: Update to 0.6-8. 
* gnu/packages/cran.scm (r-lavaan): Update to 0.6-8.
 2021-03-15 13:45:30 +01:00
Ricardo Wurmus
dae999bc48
gnu: r-parallelly: Update to 1.24.0. 
* gnu/packages/cran.scm (r-parallelly): Update to 1.24.0.
 2021-03-15 13:45:30 +01:00
Ricardo Wurmus
ecd03401c6
gnu: r-effectsize: Update to 0.4.4. 
* gnu/packages/cran.scm (r-effectsize): Update to 0.4.4.
 2021-03-15 13:45:30 +01:00
Ricardo Wurmus
b5aa552e63
gnu: r-magick: Update to 2.7.0. 
* gnu/packages/cran.scm (r-magick): Update to 2.7.0.
 2021-03-15 13:45:30 +01:00
Ricardo Wurmus
dfa052bbc9
gnu: r-blockfest: Update to 2.0. 
* gnu/packages/cran.scm (r-blockfest): Update to 2.0.
 2021-03-15 13:45:30 +01:00
Ricardo Wurmus
796a2241e3
gnu: r-flextable: Update to 0.6.4. 
* gnu/packages/cran.scm (r-flextable): Update to 0.6.4.
 2021-03-15 13:45:30 +01:00
Ricardo Wurmus
77e5a20c43
gnu: r-maptools: Update to 1.1-1. 
* gnu/packages/cran.scm (r-maptools): Update to 1.1-1.
 2021-03-15 13:45:30 +01:00
Ricardo Wurmus
87d3f805b9
gnu: r-utf8: Update to 1.2.1. 
* gnu/packages/cran.scm (r-utf8): Update to 1.2.1.
[native-inputs]: Add r-knitr.
 2021-03-15 13:45:30 +01:00
Ricardo Wurmus
d163c71e0a
gnu: r-xfun: Update to 0.22. 
* gnu/packages/cran.scm (r-xfun): Update to 0.22.
 2021-03-15 13:45:30 +01:00
Ricardo Wurmus
70257ad2c0
gnu: r-ipred: Update to 0.9-11. 
* gnu/packages/cran.scm (r-ipred): Update to 0.9-11.
 2021-03-15 13:45:29 +01:00
Ricardo Wurmus
bfa09fd922
gnu: r-lava: Update to 1.6.9. 
* gnu/packages/cran.scm (r-lava): Update to 1.6.9.
 2021-03-15 13:45:29 +01:00
Ricardo Wurmus
172da782db
gnu: r-rvest: Update to 1.0.0. 
* gnu/packages/cran.scm (r-rvest): Update to 1.0.0.
[propagated-inputs]: Add r-lifecycle, r-rlang, and r-tibble.
 2021-03-15 13:45:29 +01:00
Ricardo Wurmus
7bdef3789d
gnu: r-zoo: Update to 1.8-9. 
* gnu/packages/cran.scm (r-zoo): Update to 1.8-9.
 2021-03-15 13:45:29 +01:00
Ricardo Wurmus
e1240e22f5
gnu: Add r-spatstat-linnet. 
* gnu/packages/cran.scm (r-spatstat-linnet): New variable.
 2021-03-15 13:45:29 +01:00
Ricardo Wurmus
3ebae705f9
gnu: Add r-spatstat-core. 
* gnu/packages/cran.scm (r-spatstat-core): New variable.
 2021-03-15 13:45:29 +01:00
Ricardo Wurmus
ddfe3f77a9
gnu: Add r-spatstat-geom. 
* gnu/packages/cran.scm (r-spatstat-geom): New variable.
 2021-03-15 13:45:29 +01:00
Ricardo Wurmus
78373e394d
gnu: Add r-spatstat-sparse. 
* gnu/packages/cran.scm (r-spatstat-sparse): New variable.
 2021-03-15 13:45:29 +01:00
Léo Le Bouter
1ed435bf39
gnu: python-sphobjinv: Fix build. 
* gnu/packages/sphinx.scm (python-sphobjinv):
[patches]: Remove.
[propagated-inputs]: Add (uncomment) python-certifi.
 2021-03-15 12:51:54 +01:00
Léo Le Bouter
3096428889
gnu: libcroco/fixed: Make private. 
* gnu/packages/gnome.scm (libcroco/fixed): Use define instead of
define-public.
 2021-03-15 12:22:18 +01:00
Léo Le Bouter
8a085c1780
gnu: cyrus-sasl/fixed: Make private. 
* gnu/packages/cyrus-sasl.scm (cyrus-sasl/fixed): Use define instead of
define-public.
 2021-03-15 12:22:17 +01:00
Léo Le Bouter
cddf0b8955
gnu: unzip/fixed: Make private. 
* gnu/packages/compression.scm (unzip/fixed): Use define instead of
define-public.
 2021-03-15 12:22:17 +01:00
Tanguy Le Carrour
3e83e99322
gnu: poetry: Update to 1.1.5. 
* gnu/packages/python-xyz.scm (poetry): Update to 1.1.5.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2021-03-15 11:19:37 +00:00
Tanguy Le Carrour
014fa5cc6b
gnu: python-poetry-core: Update to 1.0.2. 
* gnu/packages/python-build.scm (python-poetry-core): Update to 1.0.2.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2021-03-15 11:19:35 +00:00