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Author SHA1 Message Date
Danny Milosavljevic
58adcaa19f
gnu: docker: Fix more paths. 
* gnu/packages/docker.scm (docker)[inputs]: Add util-linux.
[arguments]<#:phases>[patch-paths]: Fix more paths.
 2019-01-10 04:33:47 +01:00
Danny Milosavljevic
f0bfd0fc21
services: docker: Specify log file for containerd. 
* gnu/services/docker.scm (containerd-shepherd-service): Specify log file
for containerd.
 2019-01-10 03:54:28 +01:00
Danny Milosavljevic
7d8a4eeacc
tests: Add Docker system test. 
* gnu/tests/docker.scm: New file.
 2019-01-10 03:44:20 +01:00
Danny Milosavljevic
65a7e35cb5
gnu: docker: Substitute LookPath of literals generally. 
* gnu/packages/docker.scm (docker)[arguments]<#:phases>[patch-paths]:
Substitute LookPath of literals generally.
 2019-01-10 03:12:32 +01:00
Danny Milosavljevic
e9b316453e
gnu: Add docker-cli. 
* gnu/packages/docker.scm (docker-cli): New variable.
 2019-01-10 03:01:12 +01:00
Danny Milosavljevic
8af4c335e3
services: Add docker. 
* gnu/services/docker.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi (Miscellaneous Services): Document the service.
 2019-01-10 03:00:55 +01:00
Danny Milosavljevic
f87ea24a82
gnu: Add docker. 
* gnu/packages/docker.scm (docker): New variable.
* gnu/packages/patches/docker-engine-test-noinstall.patch: New file.
* gnu/packages/patches/docker-fix-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add them.
 2019-01-10 02:49:14 +01:00
Leo Famulari
fc51c28ae8
gnu: Blender: Update to a beta release of 2.80. 
Fixes <https://bugs.gnu.org/33608> and <https://bugs.gnu.org/33882>.

* gnu/packages/graphics.scm (blender): Update to 2.80-beta-0.3c3d80e.
[source]: Fetch from the Git repository.
[inputs]: Use OpenJPEG 2. Add Numpy.
[arguments]: Specify the location of Numpy. Remove some configure flags that are
no longer used. Comment out the 'fix-broken-import' phase because the
file it patches doesn't exist in the Git sources.
[description]: Add a warning about the beta status.
 2019-01-09 18:54:16 -05:00
Jelle Licht
b96f0e6ff9
gnu: emacs-ghub: Update to 3.2.0. 
* gnu/packages/emacs.scm (emacs-ghub): Update to 3.2.0.
[source]: Use 'git-fetch'.
[propagated-inputs]: Add emacs-dash, emacs-graphql,
emacs-let-alist, emacs-treepy.
 2019-01-09 22:40:32 +01:00
Jelle Licht
9bc7dd62b4
gnu: emacs-magit-popup: Update to 2.12.5. 
* gnu/packages/emacs.scm (emacs-magit-popup): Update to 2.12.5.
 2019-01-09 22:40:25 +01:00
Jelle Licht
8d59ef68cb
gnu: emacs-with-editor: Update to 2.8.0. 
* gnu/packages/emacs.scm (emacs-with-editor): Update to 2.8.0.
[source]: Use 'git-fetch'.
 2019-01-09 22:40:13 +01:00
Jelle Licht
5b07f06804
gnu: Add emacs-graphql. 
* gnu/packages/emacs.scm (emacs-graphql): New variable.
 2019-01-09 22:40:02 +01:00
Jelle Licht
abb8dff054
gnu: Add emacs-treepy. 
* gnu/packages/emacs.scm (emacs-treepy): New variable.
 2019-01-09 22:38:22 +01:00
Jelle Licht
56c50c71b5
gnu: emacs-emacsql: Update to 3.0.0. 
* gnu/packages/emacs.scm (emacs-emacsql): Update to 3.0.0.
[source]: Use 'git-fetch'.
[arguments]: Remove unnecessary fix.
 2019-01-09 22:38:06 +01:00
Jelle Licht
d4e915f9b5
gnu: emacs-closql: Update to 1.0.0. 
* gnu/packages/emacs.scm (emacs-closql): Update to 1.0.0.
[source]: Use 'git-fetch'.
 2019-01-09 22:37:52 +01:00
Leo Famulari
817e09c174
gnu: Django: Update to 1.11.18 [fixes CVE-2019-3498]. 
* gnu/packages/django.scm (python-django, python2-django): Update to 1.11.18.
 2019-01-09 15:44:36 -05:00
Leo Famulari
e82c98abe9
gnu: aria2: Fix CVE-2019-3500. 
* gnu/packages/patches/aria2-CVE-2019-3500.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/bittorrent.scm (aria2)[source]: Use it.
 2019-01-09 15:38:19 -05:00
Leo Famulari
45ee3fde87
gnu: hashcat: Update to 5.1.0. 
* gnu/packages/password-utils.scm (hashcat): Update to 5.1.0.
 2019-01-09 14:05:20 -05:00
Danny Milosavljevic
f73b7bf6e2
gnu: fasm: Update comments. 
* gnu/packages/assembly.scm (fasm): Update comments.
 2019-01-09 19:33:28 +01:00
Danny Milosavljevic
cb95e79f14
gnu: fasm: Fix grammatical errors in description. 
* gnu/packages/assembly.scm (fasm)[description]: Modify.
 2019-01-09 19:33:27 +01:00
Danny Milosavljevic
1bde3d2cbf
gnu: Add dev86. 
* gnu/packages/assembly.scm (dev86): New variable.
 2019-01-09 19:33:27 +01:00
Efraim Flashner
ab7aa06cac
gnu: python-pygit2: Update to 0.27.3. 
* gnu/packages/python.scm (python-pygit2): Update to 0.27.3.
[arguments]: Add custom phase to compile with cffi support. Add custom
phase to not require specific versions of python-cffi.
[native-inputs]: Add python-pytest.
 2019-01-09 20:25:50 +02:00
Ludovic Courtès
1b504b498a
gnu: libgit2: Update to 0.27.7. 
* gnu/packages/version-control.scm (libgit2): Update to 0.27.7.
 2019-01-09 18:47:57 +01:00
Tim Gesthuizen
037c3b0ea2
gnu: emacs-irony-mode: Remove propagated input 
emacs-irony-mode finds its server binary because its a propagated input and is
in the path. We can substitute the variable `irony-server-install-prefix` to
not propagate the input and keep the binary isolated from the user.

* gnu/packages/emacs.scm (emacs-irony-mode):
[propagated-inputs] Remove propagated inputs
[inputs] Add emacs-irony-mode-server
[arguments] Add phase substituting the variable of the server path

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-01-09 18:47:57 +01:00
Tim Gesthuizen
ecf7e4ea43
gnu: emacs-ggtags: Don't require GNU Global in path 
emacs-ggtags relies on the GNU Global tools (global and gtags) to be available
in the path. This way it will grab some random executable if it will find
executables at all.
This is fixed by setting the prefix to GNU Global in the store. This way
emacs-ggtags will use specific deterministic executables.

* gnu/packages/emacs.scm (emacs-ggtags):
[inputs]: Add GNU Global to the inputs
[arguments]: Add a phase for substituting the right path to the executables

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-01-09 18:47:57 +01:00
Vasile Dumitrascu
b2a5ef2e94
gnu: e2fsprogs: Update to 1.44.5. 
* gnu/packages/linux.scm (e2fsprogs): Update to 1.44.5.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-01-09 18:47:57 +01:00
Vasile Dumitrascu
4287bd19c7
gnu: bind: Update to 9.12.3-P1. 
* gnu/packages/dns.scm (bind): Update to 9.12.3-P1.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-01-09 18:47:57 +01:00
Brett Gilio
25a0ffbf27
gnu: emacs-md4rd: Update to c55512c. 
* gnu/packages/emacs.scm (emacs-md4rd): Update to c55512c.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-01-09 18:47:56 +01:00
Ricardo Wurmus
cba08f60a1
gnu: Add r-mcmc. 
* gnu/packages/cran.scm (r-mcmc): New variable.
 2019-01-09 17:13:52 +01:00
Ricardo Wurmus
39274ab4d9
gnu: Add r-parcor. 
* gnu/packages/cran.scm (r-parcor): New variable.
 2019-01-09 17:13:52 +01:00
Ricardo Wurmus
0af9616d91
gnu: Add r-huge. 
* gnu/packages/cran.scm (r-huge): New variable.
 2019-01-09 17:13:52 +01:00
Ricardo Wurmus
879a15203b
gnu: Add r-ppls. 
* gnu/packages/cran.scm (r-ppls): New variable.
 2019-01-09 17:13:52 +01:00
Ricardo Wurmus
17932a0f63
gnu: Add r-epi. 
* gnu/packages/cran.scm (r-epi): New variable.
 2019-01-09 17:13:52 +01:00
Ricardo Wurmus
728012dae8
gnu: Add r-etm. 
* gnu/packages/cran.scm (r-etm): New variable.
 2019-01-09 17:13:52 +01:00
Ricardo Wurmus
7aeec0cf37
gnu: Add r-cmprsk. 
* gnu/packages/cran.scm (r-cmprsk): New variable.
 2019-01-09 17:13:52 +01:00
Ricardo Wurmus
e3c0e3e360
gnu: Add r-protviz. 
* gnu/packages/cran.scm (r-protviz): New variable.
 2019-01-09 17:13:52 +01:00
Ricardo Wurmus
fe4e9f0349
gnu: Add r-rbamtools. 
* gnu/packages/cran.scm (r-rbamtools): New variable.
 2019-01-09 17:13:52 +01:00
Ricardo Wurmus
e50722c8e6
gnu: Add r-genenet. 
* gnu/packages/cran.scm (r-genenet): New variable.
 2019-01-09 17:13:52 +01:00
Ricardo Wurmus
6a5bfe09eb
gnu: Add r-longitudinal. 
* gnu/packages/cran.scm (r-longitudinal): New variable.
 2019-01-09 17:13:52 +01:00
Ricardo Wurmus
1ea708af8c
gnu: Add r-survivalroc. 
* gnu/packages/cran.scm (r-survivalroc): New variable.
 2019-01-09 17:13:52 +01:00
Ricardo Wurmus
afc0d8158b
gnu: Add r-bootstrap. 
* gnu/packages/cran.scm (r-bootstrap): New variable.
 2019-01-09 17:13:52 +01:00
Ricardo Wurmus
4fcbd7eaf3
gnu: Add r-rmeta. 
* gnu/packages/cran.scm (r-rmeta): New variable.
 2019-01-09 17:13:52 +01:00
Ricardo Wurmus
c2d6e866ac
gnu: Add r-drc. 
* gnu/packages/cran.scm (r-drc): New variable.
 2019-01-09 17:13:52 +01:00
Ricardo Wurmus
99c164a5c7
gnu: Add r-spatialextremes. 
* gnu/packages/cran.scm (r-spatialextremes): New variable.
 2019-01-09 17:13:52 +01:00
Ricardo Wurmus
32725458b7
gnu: Add r-fields. 
* gnu/packages/cran.scm (r-fields): New variable.
 2019-01-09 17:13:52 +01:00
Ricardo Wurmus
90104ecd66
gnu: Add r-spam. 
* gnu/packages/cran.scm (r-spam): New variable.
 2019-01-09 17:13:51 +01:00
Ricardo Wurmus
f51dcc275e
gnu: Add r-dotcall64. 
* gnu/packages/cran.scm (r-dotcall64): New variable.
 2019-01-09 17:13:49 +01:00
Ricardo Wurmus
658b2b62cb
gnu: Add r-assertive. 
* gnu/packages/cran.scm (r-assertive): New variable.
 2019-01-09 15:43:51 +01:00
Ricardo Wurmus
39231abf4d
gnu: Add r-assertive-data. 
* gnu/packages/cran.scm (r-assertive-data): New variable.
 2019-01-09 15:43:51 +01:00
Ricardo Wurmus
39ef8e097b
gnu: Add r-assertive-data-uk. 
* gnu/packages/cran.scm (r-assertive-data-uk): New variable.
 2019-01-09 15:43:51 +01:00
Ricardo Wurmus
6d3702e5ce
gnu: Add r-assertive-data-us. 
* gnu/packages/cran.scm (r-assertive-data-us): New variable.
 2019-01-09 15:43:51 +01:00
Ricardo Wurmus
66d0a0a706
gnu: Add r-assertive-strings. 
* gnu/packages/cran.scm (r-assertive-strings): New variable.
 2019-01-09 15:43:51 +01:00
Ricardo Wurmus
29d9a2affb
gnu: Add r-assertive-datetimes. 
* gnu/packages/cran.scm (r-assertive-datetimes): New variable.
 2019-01-09 15:43:51 +01:00
Ricardo Wurmus
50ce8b1e2c
gnu: Add r-assertive-code. 
* gnu/packages/cran.scm (r-assertive-code): New variable.
 2019-01-09 15:43:51 +01:00
Ricardo Wurmus
1f0a761a14
gnu: Add r-assertive-files. 
* gnu/packages/cran.scm (r-assertive-files): New variable.
 2019-01-09 15:43:51 +01:00
Ricardo Wurmus
5e3bd35506
gnu: Add r-assertive-types. 
* gnu/packages/cran.scm (r-assertive-types): New variable.
 2019-01-09 15:43:51 +01:00
Ricardo Wurmus
dcafcfb4fd
gnu: Add r-assertive-reflection. 
* gnu/packages/cran.scm (r-assertive-reflection): New variable.
 2019-01-09 15:43:51 +01:00
Ricardo Wurmus
c358b5d418
gnu: Add r-assertive-models. 
* gnu/packages/cran.scm (r-assertive-models): New variable.
 2019-01-09 15:43:51 +01:00
Ricardo Wurmus
905aa46ae5
gnu: Add r-assertive-matrices. 
* gnu/packages/cran.scm (r-assertive-matrices): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
2da2d2f605
gnu: Add r-assertive-sets. 
* gnu/packages/cran.scm (r-assertive-sets): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
dac9c1f604
gnu: Add r-assertive-numbers. 
* gnu/packages/cran.scm (r-assertive-numbers): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
4b2d17edaa
gnu: Add r-assertive-properties. 
* gnu/packages/cran.scm (r-assertive-properties): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
8004bb2451
gnu: Add r-assertive-base. 
* gnu/packages/cran.scm (r-assertive-base): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
a536c7c9ad
gnu: Add r-rmpfr. 
* gnu/packages/cran.scm (r-rmpfr): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
1ab5160434
gnu: Add r-gmp. 
* gnu/packages/cran.scm (r-gmp): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
dfd09f7bad
gnu: Add r-bigrquery. 
* gnu/packages/cran.scm (r-bigrquery): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
ad6fea1690
gnu: Add r-ontologyindex. 
* gnu/packages/cran.scm (r-ontologyindex): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
9170eb7f1f
gnu: Add r-rapidjsonr. 
* gnu/packages/cran.scm (r-rapidjsonr): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
e7176ac5bd
gnu: Add r-pixmap. 
* gnu/packages/cran.scm (r-pixmap): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
895efece37
gnu: Add r-strucchange. 
* gnu/packages/cran.scm (r-strucchange): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
d28be7b76b
gnu: Add r-als. 
* gnu/packages/cran.scm (r-als): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
9401f56b81
gnu: Add r-chemometricswithr. 
* gnu/packages/cran.scm (r-chemometricswithr): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
25861356ed
gnu: Add r-iso. 
* gnu/packages/cran.scm (r-iso): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
00436e2cac
gnu: Add r-nnls. 
* gnu/packages/cran.scm (r-nnls): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
2871b670a8
gnu: Add r-kohonen. 
* gnu/packages/cran.scm (r-kohonen): New variable.
 2019-01-09 15:43:50 +01:00
Ricardo Wurmus
d0eb09a134
gnu: Add r-grimport. 
* gnu/packages/cran.scm (r-grimport): New variable.
 2019-01-09 15:43:49 +01:00
Ricardo Wurmus
7eec973e81
gnu: Add r-tractor-base. 
* gnu/packages/cran.scm (r-tractor-base): New variable.
 2019-01-09 15:43:49 +01:00
Ricardo Wurmus
b98662c53a
gnu: Add r-reportr. 
* gnu/packages/cran.scm (r-reportr): New variable.
 2019-01-09 15:43:49 +01:00
Ricardo Wurmus
cb03d6c6f3
gnu: Add r-ore. 
* gnu/packages/cran.scm (r-ore): New variable.
 2019-01-09 15:43:49 +01:00
Ricardo Wurmus
6e09f50613
gnu: Add r-shades. 
* gnu/packages/cran.scm (r-shades): New variable.
 2019-01-09 15:43:49 +01:00
Ricardo Wurmus
f79e63a571
gnu: Add r-rnifti. 
* gnu/packages/cran.scm (r-rnifti): New variable.
 2019-01-09 15:43:49 +01:00
Ricardo Wurmus
b2e777b27c
gnu: Add r-tfmpvalue. 
* gnu/packages/cran.scm (r-tfmpvalue): New variable.
 2019-01-09 15:43:49 +01:00
Ricardo Wurmus
adcd0cc87e
gnu: Add r-splitstackshape. 
* gnu/packages/cran.scm (r-splitstackshape): New variable.
 2019-01-09 15:43:49 +01:00
Ricardo Wurmus
5f0fbfc0ad
gnu: Add r-lassopv. 
* gnu/packages/cran.scm (r-lassopv): New variable.
 2019-01-09 15:43:49 +01:00
Ricardo Wurmus
3d62d98e69
gnu: Add r-flare. 
* gnu/packages/cran.scm (r-flare): New variable.
 2019-01-09 15:43:49 +01:00
Ricardo Wurmus
029425cbce
gnu: Add r-vbsr. 
* gnu/packages/cran.scm (r-vbsr): New variable.
 2019-01-09 15:43:49 +01:00
Ricardo Wurmus
5574cb812a
gnu: Add r-rpostgresql. 
* gnu/packages/cran.scm (r-rpostgresql): New variable.
 2019-01-09 15:43:49 +01:00
Ricardo Wurmus
3088b3fc5b
gnu: Add r-rspectra. 
* gnu/packages/cran.scm (r-rspectra): New variable.
 2019-01-09 15:43:45 +01:00
Ludovic Courtès
0991fd5336
build: Require Guile 2.2. 
* configure.ac: Require Guile 2.2.
* README: Adjust accordingly.
* doc/guix.texi (Requirements): Likewise.
* gnu/packages/package-management.scm (guile2.0-guix): Deprecate.
(guix-minimal): Inherit from GUIX, not from GUILE2.0-GUIX.
 2019-01-09 14:47:53 +01:00
Eric Bavier
fefcb122ac
gnu: dvdisaster: Run regression tests. 
* gnu/packages/cdrom.scm (dvdisaster)[arguments]: Remove #:tests? argument.
Add 'check' phase.
 2019-01-08 09:09:31 -06:00
Eric Bavier
98b0ec7fa6
gnu: dvdisaster: Install desktop file. 
* gnu/packages/cdrom.scm (dvdisaster)[arguments]: Add 'install-desktop phase.
 2019-01-08 09:09:25 -06:00
Clément Lassieur
627e6d8c11
gnu: prosody: Update to 0.11.1. 
* gnu/packages/messaging.scm (prosody): Update to 0.11.1.
[arguments]: Replace "Makefile" with "GNUmakefile".  Change "5.1" to "5.2".
Explain why there are no tests.
[inputs]: Replace lua-5.1, lua5.1-bitop, lua5.1-expat, lua5.1-socket,
lua5.1-filesystem, lua5.1-sec with lua-5.2, lua5.2-bitop, lua5.2-expat,
lua5.2-socket, lua5.2-filesystem, lua5.2-sec.
 2019-01-08 15:23:36 +01:00
Clément Lassieur
eb5b6c5777
gnu: Add lua5.2-sec. 
* gnu/packages/lua.scm (lua5.2-sec): New variable.
(make-lua-sec): New procedure.
(lua5.1-sec, lua5.2-sec): Call it.
 2019-01-08 15:23:36 +01:00
Clément Lassieur
d994325747
gnu: Add lua-filesystem and lua5.2-filesystem. 
* gnu/packages/lua.scm (lua-filesystem, lua5.2-filesystem): New variables.
(make-lua-filesystem): New procedure.
(lua-filesystem, lua5.1-filesystem, lua5.2-filesystem): Call it.
 2019-01-08 15:23:36 +01:00
Clément Lassieur
253aab77c5
gnu: Add lua5.2-socket. 
* gnu/packages/lua.scm (lua5.2-socket): New variable.
(make-lua-socket): New procedure.
(lua5.1-socket, lua5.2-socket): Call it.
 2019-01-08 15:23:36 +01:00
Clément Lassieur
7c97a0631e
gnu: Add lua5.2-expat. 
* gnu/packages/lua.scm (lua5.2-expat): New variable.
(make-lua-expat): New procedure.
(lua5.1-expat, lua5.2-expat): Call it.
 2019-01-08 15:23:36 +01:00
Efraim Flashner
580f33e119
gnu: criu: Update to 3.11. 
* gnu/packages/virtualization.scm (criu): Update to 3.11.
[arguments]: Add custom phase to patch python calls.
 2019-01-08 12:29:42 +02:00
Efraim Flashner
49fe965d28
gnu: criu: Fix building on armhf-linux. 
* gnu/packages/virtualization.scm (criu)[arguments]: Hardcode the arm
version in the Makefile.
 2019-01-08 12:29:40 +02:00
Clément Lassieur
b509381089
gnu: gajim-omemo: Update to 2.6.26. 
* gnu/packages/messaging.scm (gajim-omemo): Update to 2.6.26.
 2019-01-08 10:19:55 +01:00
Clément Lassieur
5cfec72f39
gnu: gajim: Update to 1.1.1. 
* gnu/packages/messaging.scm (gajim): Update to 1.1.1.
[arguments]: Replace #:test-target with a 'check' phase.
 2019-01-08 10:19:55 +01:00
Tobias Geerinckx-Rice
eac5d425cd
gnu: tor: Update to 0.3.4.10. 
* gnu/packages/tor.scm (tor): Update to 0.3.4.10.
 2019-01-08 04:21:53 +01:00
Tobias Geerinckx-Rice
be4f8391a4
gnu: privoxy: Update to 3.0.28. 
* gnu/packages/tor.scm (privoxy): Update to 3.0.28.
 2019-01-08 04:21:52 +01:00
Rutger Helling
3c85058c0e
gnu: libnet: Update to 1.2-rc3. 
* gnu/packages/networking.scm (libnet): Update to 1.2-rc3.
[source]: Use git-fetch.
 2019-01-07 22:07:01 +01:00
Julien Lepiller
8737666a99
gnu: ocaml-graph: Add upstream-name. 
* gnu/packages/ocaml.scm (ocaml-graph)[properties]: Add upstream-name.
 2019-01-07 22:05:47 +01:00
Julien Lepiller
33af92dd99
gnu: Move coq packages from ocaml to coq. 
* gnu/packages/ocaml.scm (coq, proof-general, coq-flocq, coq-gappa, coq-mathcomp)
(coq-coquelicot, coq-bignums, coq-interval): Move from here...
* gnu/packages/coq.scm: ... to here.  New file.
 2019-01-07 22:05:37 +01:00
Alex Kost
912f0541a3
gnu: emacs-guix: Update to 0.5.1.1. 
* gnu/packages/emacs.scm (emacs-guix): Update to 0.5.1.1.
 2019-01-07 22:52:46 +03:00
Danny Milosavljevic
40c7476af8
gnu: containerd: Update synopsis. 
* gnu/packages/docker.scm (containerd)[synopsis]: Modify.
 2019-01-07 19:13:04 +01:00
Danny Milosavljevic
54891e850a
gnu: containerd: Enable tests. 
* gnu/packages/docker.scm (containerd)[arguments]: Remove #:tests?.
 2019-01-07 19:12:14 +01:00
Ricardo Wurmus
1f1e338ad4
gnu: Add missing use-module clause. 
This is a follow-up to 4e5b8f7215.

* gnu/packages/docker.scm: Add missing use-module clause.
 2019-01-07 18:45:23 +01:00
Ricardo Wurmus
d53b23176f
gnu: Add r-corpcor. 
* gnu/packages/cran.scm (r-corpcor): New variable.
 2019-01-07 18:44:04 +01:00
Ricardo Wurmus
e3bb076678
gnu: Add r-ddrtree. 
* gnu/packages/cran.scm (r-ddrtree): New variable.
 2019-01-07 18:44:04 +01:00
Ricardo Wurmus
9f33d76c33
gnu: Add r-qlcmatrix. 
* gnu/packages/cran.scm (r-qlcmatrix): New variable.
 2019-01-07 18:44:04 +01:00
Ricardo Wurmus
58bc8857fb
gnu: Add r-combinat. 
* gnu/packages/cran.scm (r-combinat): New variable.
 2019-01-07 18:44:04 +01:00
Ricardo Wurmus
13f5837b4c
gnu: Add r-densityclust. 
* gnu/packages/cran.scm (r-densityclust): New variable.
 2019-01-07 18:44:04 +01:00
Ricardo Wurmus
b614009e6a
gnu: Add r-sparsesvd. 
* gnu/packages/cran.scm (r-sparsesvd): New variable.
 2019-01-07 18:44:04 +01:00
Ricardo Wurmus
fbebccf7f6
gnu: Add r-docopt. 
* gnu/packages/cran.scm (r-docopt): New variable.
 2019-01-07 18:44:04 +01:00
Ricardo Wurmus
45b469a472
gnu: Add r-rvcheck. 
* gnu/packages/cran.scm (r-rvcheck): New variable.
 2019-01-07 18:44:04 +01:00
Ricardo Wurmus
61d7334906
gnu: Add r-tidytree. 
* gnu/packages/cran.scm (r-tidytree): New variable.
 2019-01-07 18:44:04 +01:00
Ricardo Wurmus
a6e4413d64
gnu: Add r-colorramps. 
* gnu/packages/cran.scm (r-colorramps): New variable.
 2019-01-07 18:44:04 +01:00
Ricardo Wurmus
e37935e457
gnu: Add r-wordcloud. 
* gnu/packages/cran.scm (r-wordcloud): New variable.
 2019-01-07 18:44:04 +01:00
Ricardo Wurmus
f3949fecb3
gnu: Add r-waveslim. 
* gnu/packages/cran.scm (r-waveslim): New variable.
 2019-01-07 18:44:04 +01:00
Ricardo Wurmus
db084d79ea
gnu: Add r-tiff. 
* gnu/packages/cran.scm (r-tiff): New variable.
 2019-01-07 18:44:04 +01:00
Ricardo Wurmus
44b0c5b5b1
gnu: Add r-fftwtools. 
* gnu/packages/cran.scm (r-fftwtools): New variable.
 2019-01-07 18:44:03 +01:00
Ricardo Wurmus
71601a5d92
gnu: Add r-softimpute. 
* gnu/packages/cran.scm (r-softimpute): New variable.
 2019-01-07 18:44:03 +01:00
Ricardo Wurmus
03a3ec5e18
gnu: Add r-adgoftest. 
* gnu/packages/cran.scm (r-adgoftest): New variable.
 2019-01-07 18:44:03 +01:00
Ricardo Wurmus
a50abb3614
gnu: Add r-gsl. 
* gnu/packages/cran.scm (r-gsl): New variable.
 2019-01-07 18:44:03 +01:00
Ricardo Wurmus
ced51a204e
gnu: Add r-stabledist. 
* gnu/packages/cran.scm (r-stabledist): New variable.
 2019-01-07 18:44:03 +01:00
Efraim Flashner
dcd1aa2e64
gnu: perl-lingua-translit: Update to 0.28. 
* gnu/packages/perl.scm (perl-lingua-translit): Update to 0.28.
 2019-01-07 19:42:41 +02:00
Danny Milosavljevic
4e5b8f7215
gnu: Add containerd. 
* gnu/packages/docker.scm (containerd): New variable.
 2019-01-07 16:41:17 +01:00
Danny Milosavljevic
7f2d67c826
gnu: Add dummy linker for arm-elf. 
* gnu/packages/bootstrap.scm (glibc-dynamic-linker): Add case for arm-elf.
 2019-01-07 16:39:35 +01:00
Ricardo Wurmus
2a2760a08f
gnu: Move R packages from geo.scm to cran.scm. 
* gnu/packages/geo.scm (r-maps, r-mapproj, r-rgooglemaps, r-geosphere,
r-ggmap): Move from here...
* gnu/packages/cran.scm: ...to here.
 2019-01-07 15:55:06 +01:00
Ricardo Wurmus
576e74eee8
gnu: emacs-ess: Move to (gnu packages statistics). 
* gnu/packages/emacs.scm (emacs-ess): Move from here...
* gnu/packages/statistics.scm (emacs-ess): ...to here.
 2019-01-07 15:55:06 +01:00
Ricardo Wurmus
61f2587db9
gnu: python-rpy2: Move to (gnu packages statistics). 
* gnu/packages/python.scm (python-rpy2): Move from here...
* gnu/packages/statistics.scm (python-rpy2): ...to here.
 2019-01-07 15:55:06 +01:00
Ricardo Wurmus
e0d3f4bf1a
gnu: Remove reference to (gnu packages statistics). 
* gnu/packages/web.scm: Remove obsolete use-module clause.
 2019-01-07 15:55:06 +01:00
Ricardo Wurmus
d9bec9a87b
gnu: r-rmysql: Move from databases.scm to cran.scm 
* gnu/packages/databases.scm (r-rmysql): Move from here...
* gnu/packages/cran.scm (r-rmysql): ...to here.
 2019-01-07 15:55:06 +01:00
Jelle Licht
41a010875b
gnu: biber: Update to 2.12. 
* gnu/packages/tex.scm (biber): Update to 2.12.
[source]: Use 'git-fetch'. Add patch.
[inputs]: Add perl-file-slurper. Remove perl-file-slurp.
* gnu/packages/patches/biber-fix-encoding-write.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2019-01-07 15:40:58 +01:00
Ricardo Wurmus
60a166c629
gnu: r-feather: Move from serialization.scm to cran.scm. 
* gnu/packages/serialization.scm (r-feather): Move from here...
* gnu/packages/cran.scm (r-feather): ...to here.
 2019-01-07 15:21:09 +01:00
Ludovic Courtès
67eebb19b7
gnu: Fix top-level circular references between emacs.scm and llvm.scm. 
Previously, loading either of these two modules could fail somewhat
non-deterministically because each top-level was referencing a variable
defined by the other module's top-level.

* gnu/packages/emacs.scm (package-elisp-from-package): Move to...
* gnu/packages/llvm.scm (package-elisp-from-package): Here.  Keep
private.
 2019-01-07 15:09:30 +01:00
Jelle Licht
37e461e6f4
gnu: perl-file-slurper: Update to 0.012. 
* gnu/packages/perl.scm (perl-file-slurper): Update to 0.012.
[native-inputs]: Add perl-test-warnings.
 2019-01-07 15:08:08 +01:00
Ricardo Wurmus
92ce188331
gnu: Move R packages from web.scm to cran.scm. 
* gnu/packages/web.scm (r-httpuv, r-jsonlite, r-servr, r-htmltools,
r-htmlwidgets, r-htmltable, r-curl, r-hwriter, r-rjson, r-shiny,
r-shinydashboard, r-shinyfiles, r-crosstalk, r-rook, r-miniui): Move these
from here...
* gnu/packages/cran.scm: ...to here.
 2019-01-07 15:05:27 +01:00
Pierre Neidhardt
3a3d4d9d54
Revert "gnu: Use package-elisp-from-package for clangs emacs lisp files" 
This reverts commit 5bc2e14add.
 2019-01-07 14:58:40 +01:00
Efraim Flashner
6fd2ed23ac
gnu: mantis: Limit to x86_64-linux. 
* gnu/packages/bioinformatics.scm (mantis)[supported-systems]: New field.
 2019-01-07 15:47:34 +02:00
Pierre Neidhardt
e97b23e4bd
gnu: package-elisp-from-package: Clarify docstring. 
* gnu/packages/emacs.scm (package-elisp-from-package)[docstring]: Clarify.
 2019-01-07 14:45:21 +01:00
Tim Gesthuizen
5bc2e14add
gnu: Use package-elisp-from-package for clangs emacs lisp files 
Use package-elisp-from-package for emacs-clang-format and emacs-clang-rename.
Also remove package-from-clang-elisp-file as it is not needed anymore.

* gnu/packages/llvm.scm (emacs-clang-format): Use package-elisp-from-package
* gnu/packages/llvm.scm (emacs-clang-rename): Use package-elisp-from-package
* gnu/packages/llvm.scm (package-from-clang-elisp-file): Remove function
 2019-01-07 14:45:21 +01:00
Tim Gesthuizen
7d5856bd45
gnu: Add package-elisp-from-package 
Add a function to generate package definitions that packages single elisp
files from other packages.

* gnu/packages/emacs.scm (package-elisp-from-package): New function
 2019-01-07 14:45:21 +01:00
Ludovic Courtès
915c6bf60c
gnu: python2-fastlmm: Move to machine-learning.scm. 
This is a step towards removing OCaml modules from the closure
of (gnu packages python).

* gnu/packages/python.scm (python2-fastlmm): Move to...
* gnu/packages/machine-learning.scm (python2-fastlmm): ... here.
 2019-01-07 14:41:01 +01:00
Ludovic Courtès
6fd5a80dbe
gnu: Remove unnecessary build-side module imports. 
* gnu/packages/batik.scm, gnu/packages/boost.scm,
gnu/packages/calendar.scm, gnu/packages/gl.scm,
gnu/packages/lua.scm, gnu/packages/qt.scm, gnu/packages/simulation.scm,
gnu/packages/terminals.scm: Remove unnecessary import of (guix build
utils).
* gnu/packages/emacs.scm: Remove unnecessary imports of (guix ...).
* gnu/packages/libcanberra.scm: Use (srfi srfi-1) instead of (guix build
utils) for 'alist-delete'.
* gnu/packages/wxwidgets.scm: Likewise.
 2019-01-07 14:41:00 +01:00
Ludovic Courtès
db1eb632be
gnu: Move Emacs modes for Dedukti to ocaml.scm. 
This removes OCaml-related modules from the closure of (gnu packages
emacs).

* gnu/packages/emacs.scm (emacs-dedukti-mode, emacs-flycheck-dedukti):
Move to ...
* gnu/packages/ocaml.scm: ... here.
 2019-01-07 14:41:00 +01:00
Ludovic Courtès
59a075047d
gnu: Move OCaml packages away from maths.scm. 
This removes (gnu packages ocaml) and related build system modules from
the closure of (gnu packages maths).

* gnu/packages/maths.scm (ocaml-gsl, ocaml4.01-gsl, cubicle): Move to...
* gnu/packages/ocaml.scm: ... here.
 2019-01-07 14:41:00 +01:00
Pierre Neidhardt
3b451546ed
gnu: Add rmlint. 
* gnu/packages/disk.scm (rmlint): New variable.
 2019-01-07 14:32:44 +01:00
Clément Lassieur
e0aa5b5bbf
gnu: Add prosody-http-upload. 
* gnu/packages/messaging.scm (prosody-http-upload): New variable.
 2019-01-07 14:15:57 +01:00
Ricardo Wurmus
e942813aac
gnu: Add mantis. 
* gnu/packages/bioinformatics.scm (mantis): New variable.
 2019-01-07 11:56:18 +01:00
Ricardo Wurmus
ad6f13308b
gnu: Add sdsl-lite. 
* gnu/packages/datastructures.scm (sdsl-lite): New variable.
 2019-01-07 11:56:14 +01:00
Efraim Flashner
c71bbfcca9
gnu: autoconf-archive: Update to 2019.01.06. 
* gnu/packages/autotools.scm (autoconf-archive): Update to 2019.01.06.
 2019-01-07 11:19:06 +02:00
Manolis Ragkousis
4d674b4143
gnu: Add jose. 
* gnu/packages/jose.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
 2019-01-07 10:15:37 +02:00
Rutger Helling
bd86a1bede
gnu: Add slurp. 
* gnu/packages/image.scm (slurp): New variable.
 2019-01-07 08:31:14 +01:00
Alex Vong
c824dedf71
gnu: libarchive: Replace with libarchive 3.3.3 and fix CVE-2018-{1000877,1000878,1000880}. 
* gnu/packages/backup.scm (libarchive)[source, home-page]: Use HTTPS.
[replacement]: New field.
(libarchive-3.3.3): New variable.
* gnu/packages/patches/libarchive-CVE-2018-1000877.patch,
gnu/packages/patches/libarchive-CVE-2018-1000878.patch,
gnu/packages/patches/libarchive-CVE-2018-1000880.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
 2019-01-07 05:42:34 +08:00
Gabriel Hondet
b7ec276e57
gnu: Add kitty. 
* gnu/packages/terminals.scm (kitty): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-01-06 21:41:07 +01:00
Ludovic Courtès
b5f8c2c885
hydra: Compute jobs in an inferior. 
Previously we would rely on auto-compilation of all the Guix modules.
The complete evaluation would take ~15mn on berlin.guixsd.org and
require lots of RAM.  This approach should be faster since potentially
only part of the modules are rebuilt.  Furthermore, as a side-effect, it
builds the derivations that 'guix pull' uses.

* build-aux/hydra/gnu-system.scm: Remove 'eval-when' form.
(hydra-jobs): New procedure.
* gnu/ci.scm (package->alist, qemu-jobs, system-test-jobs)
(tarball-jobs): Return strings for the 'license' field.
* guix/self.scm (compiled-guix)[*cli-modules*]: Add (gnu ci).
 2019-01-06 21:41:07 +01:00
Ludovic Courtès
59fb5c1cdb
hydra: Move job definitions to (gnu ci). 
* build-aux/hydra/gnu-system.scm: Move code to...
* gnu/ci.scm: ... here.  New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
 2019-01-06 21:41:07 +01:00
Efraim Flashner
0f763db448
gnu: gama: Update to 2.02. 
* gnu/packages/gps.scm (gama): Update to 2.02.
 2019-01-06 15:42:06 +02:00
Efraim Flashner
644353d80d
gnu: moe: Update to 1.10. 
* gnu/packages/moe.scm (moe): Update to 1.10.
[license]: Fix license, gpl2+.
 2019-01-06 15:42:06 +02:00
Efraim Flashner
c007e35d24
gnu: recutils: Update to 1.8. 
* gnu/packages/databases.scm (recutils): Update to 1.8.
[source]: Remove snippet.
[arguments]: Remove custom 'set-bash4.4-header-location phase. Enable
parallel tests.
[inputs]: Move check ...
[native-inputs]: ... to here. Add pkg-config.
 2019-01-06 15:42:06 +02:00
Efraim Flashner
30e06c2cee
gnu: unrtf: Update to 0.21.10. 
* gnu/packages/unrtf.scm (unrtf): Update to 0.21.10.
[source]: Remove patch, remove snippet.
[license]: Update to gpl3+.
* gnu/packages/patches/unrtf-CVE-2016-10091.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2019-01-06 15:42:05 +02:00
Efraim Flashner
c65bfc658a
gnu: global: Update to 6.6.3. 
* gnu/packages/code.scm (global): Update to 6.6.3.
 2019-01-06 15:42:02 +02:00
Pierre Neidhardt
377038b8a2
gnu: emacs-evil-multiedit: Use version tag instead of commit. 
* gnu/packages/emacs.scm (emacs-evil-multiedit): Use version tag instead of commit.
 2019-01-06 13:22:09 +01:00
Rutger Helling
a51ac7af7f
gnu: wine-staging: Add ffmpeg support. 
* gnu/packages/wine.scm (wine-staging)[inputs]: Add ffmpeg.
 2019-01-06 10:55:10 +01:00
Rutger Helling
0419c5741c
gnu: wine-staging: Update to 4.0-rc5. 
* gnu/packages/wine.scm (wine-staging-patchset-data): Update to 4.0-rc5.
* gnu/packages/wine.scm (wine-staging): Update to 4.0-rc5.
 2019-01-06 10:32:05 +01:00
Efraim Flashner
99e61f3022
gnu: python-pyicu: Update to 2.2. 
* gnu/packages/python.scm (python-pyicu): Update to 2.2.
 2019-01-06 11:09:59 +02:00
Efraim Flashner
a0bb4af215
gnu: python-pysocks: Update to 1.6.8. 
* gnu/packages/python.scm (python-pysocks): Update to 1.6.8.
 2019-01-06 11:09:58 +02:00
Efraim Flashner
1fb68eefa1
gnu: python-packaging: Update to 18.0. 
* gnu/packages/python.scm (python-packaging): Update to 18.0.
 2019-01-06 11:09:58 +02:00
Efraim Flashner
3cf324665d
gnu: python-astroid: Update to 2.1.0. 
* gnu/packages/python.scm (python-astroid): Update to 2.1.0.
 2019-01-06 11:09:58 +02:00
Efraim Flashner
36df69d6fe
gnu: python-imagesize: Update to 1.1.0. 
* gnu/packages/python.scm (python-imagesize): Update to 1.1.0.
 2019-01-06 11:09:57 +02:00
Efraim Flashner
46930b7ea9
gnu: python-sphinx-alabaster-theme: Update to 0.7.12. 
* gnu/packages/python.scm (python-sphinx-alabaster-theme): Update to 0.7.12.
 2019-01-06 11:09:57 +02:00
Efraim Flashner
681edb0a4f
gnu: python-pycryptodome: Update to 3.7.2. 
* gnu/packages/python-crypto.scm (python-pycryptodome): Update to 3.7.2.
 2019-01-06 11:09:56 +02:00
Efraim Flashner
da3e0cd948
gnu: python-certifi: Update to 2018.11.29. 
* gnu/packages/python-crypto.scm (python-certifi): Update to 2018.11.29.
 2019-01-06 11:09:53 +02:00
Maxim Cournoyer
d95d3d6224
gnu: emacs-diff-hl: Update to 1.8.5. 
* gnu/packages/emacs.scm (emacs-diff-hl): Update to 1.8.5.
 2019-01-05 21:38:34 -05:00
guy fleury iteriteka
9a2e4c5db3
gnu: Add fasm. 
* gnu/packages/assembly.scm (fasm): New variable.

Signed-off-by: Kei Kebreau <kkebreau@posteo.net>
 2019-01-05 19:26:05 -05:00
Lprndn
e506b5e95d
gnu: Add nip2. 
* gnu/packages/image-processing.scm (nip2): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-01-06 00:22:05 +01:00
Efraim Flashner
210e43c762
gnu: hunspell-dict-en: Update to 2018-04-16. 
* gnu/packages/aspell.scm (aspell-word-list): Update to 2018.04.16.
[arguments]: Use 'invoke'.
 2019-01-05 22:55:14 +02:00
Efraim Flashner
15ad9eb6d0
gnu: hunspell: Update to 1.7.0. 
* gnu/packages/libreoffice.scm (hunspell): Update to 1.7.0.
[source]: Use 'git-fetch'.
 2019-01-05 22:55:14 +02:00
Efraim Flashner
87fd7a35c2
gnu: streamlink: Fix build. 
* gnu/packages/video.scm (streamlink)[source]: Add patch.
* gnu/packages/patches/streamlink-update-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2019-01-05 22:55:14 +02:00
Efraim Flashner
918a9b584d
gnu: python-iso3166: Update to 0.9. 
* gnu/packages/iso-codes.scm (python-iso3166): Update to 0.9.
 2019-01-05 22:55:14 +02:00
Efraim Flashner
9350a08432
gnu: po4a: Update to 0.55. 
* gnu/packages/gettext.scm (po4a): Update to 0.55.
[arguments]: Add 'patch-docbook-xml phase to patch references to
docbook-xml. Update custom 'disable-failing-tests phase.
[native-inputs]: Replace docbook-xml with docbook-xml-4.1.2.
 2019-01-05 22:55:13 +02:00
Efraim Flashner
5af020bb3c
gnu: python-scripttest: Use pypi uri. 
* gnu/packages/check.scm (python-scripttest)[source]: Use pypi uri.
 2019-01-05 22:55:13 +02:00
Efraim Flashner
d70cb3e008
gnu: python-pytest-xdist: Update to 1.25.0. 
* gnu/packages/check.scm (python-pytest-xdist): Update to 1.25.0.
[source]: Update source uri.
 2019-01-05 22:55:13 +02:00
Efraim Flashner
f98091d1ba
gnu: python-pytest-cov: Update to 2.6.0. 
* gnu/packages/check.scm (python-pytest-cov): Update to 2.6.0.
 2019-01-05 22:55:13 +02:00
Efraim Flashner
4df24531dc
gnu: python-subunit: Update to 1.3.0. 
* gnu/packages/check.scm (python-subunit): Update to 1.3.0.
[home-page]: Use https.
 2019-01-05 22:55:10 +02:00
Arun Isaac
b18b9d2042
gnu: octave: Fix makeinfo path configuration. 
* gnu/packages/maths.scm (octave-cli)[arguments]: Fix makeinfo path
configuration in configure-makeinfo phase.
 2019-01-05 23:49:59 +05:30
Eric Bavier
0dd8da0b1d
gnu: youtube-viewer: Install desktop file. 
* gnu/packages/video.scm (youtube-viewer)[arguments]: Add 'install-desktop
phase.
 2019-01-05 11:34:16 -06:00
Ricardo Wurmus
a773f141cb
gnu: Add paps. 
* gnu/packages/pdf.scm (paps): New variable.
 2019-01-05 17:24:38 +01:00
Efraim Flashner
e4be1faa43
gnu: python-isodate: Update to 0.6.0. 
* gnu/packages/time.scm (python-isodate): Update to 0.6.0.
[native-inputs]: Add python-six.
[home-page]: Update to new home-page.
 2019-01-04 16:17:18 +02:00
Efraim Flashner
d1e75921b2
gnu: python-tzlocal: Update to 1.5.1. 
* gnu/packages/time.scm (python-tzlocal): Update to 1.5.1.
[arguments]: Add custom phase to fix symlink issue in pypi release.
[native-inputs]: Add python-mock.
[license]: Update to expat.
 2019-01-04 16:17:14 +02:00
Efraim Flashner
f20cfa0665
gnu: python-ruamel.yaml: Update to 0.15.83. 
* gnu/packages/serialization.scm (python-ruamel.yaml): Update to 0.15.83.
 2019-01-04 15:40:35 +02:00
Mathieu Othacehe
548642db8a
gnu: video: Add missing copyright. 
* gnu/packages/video.scm: Add copyright.
 2019-01-04 11:43:06 +01:00
Mathieu Othacehe
34a19d3595
gnu: vlc: Fix typo in synopsis. 
* gnu/packages/video.scm (vlc)[synopsis]: Fix typo.
 2019-01-04 11:41:35 +01:00
Hartmut Goebel
fb0356d956
gnu: kservice: Transfer patches from NixOS. 
Transfer the NixOS patches for kservice as of 2018-02-17.
- Make QDirIterator follow symlinks.
- Normalize path, but don't resolve symlinks.

* gnu/packages/kde-frameworks.scm(kservice)<patch>: New phase.
 2019-01-04 10:10:46 +01:00
Hartmut Goebel
0fd6138175
gnu: kpackage: Transfer patches from NixOS. 
Transfer the NixOS patches for kpackage as of 2018-02-17:
- Allow external paths.
- Make QDirIterator follow symlinks.

Decided to use a patch for one of the "allow external paths" changes since
'substitute*' seems not to be robust enough.

* gnu/packages/patches/kpackage-allow-external-paths.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/kde-frameworks.scm(kpackage)[source]: Use it. <patch>: New
  phase.
 2019-01-04 10:10:46 +01:00
Hartmut Goebel
16b8aff85b
gnu: kinit: Use LIBRARY_PATH to search for dynamically loaded libs. 
Transfer the NixOS "kdeinit-libpath" patch for kinit as of
2018-02-17.

* gnu/packages/patches/kinit-kdeinit-libpath.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/kde-frameworks.scm (kinit)[source]: Use it.
 2019-01-04 10:10:44 +01:00
Hartmut Goebel
f8a0f3ac70
gnu: kinit: Use the store paths for dynamically loaded libs. 
Transfer the NixOS "kdeinit-extra_libs" patch for kinit as of
2018-02-17.

* gnu/packages/patches/kinit-kdeinit-extra_libs.patch: New filee.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/kde-frameworks.scm (kinit)[source]: Use it.
  <patch-paths>: New phase.
  [inputs]: Add kparts, plasma-framework.
 2019-01-04 10:10:43 +01:00
Hartmut Goebel
a6e532815d
gnu: kio: Search 'smbd' on $PATH. 
Transfer the remaining NixOS patch for kio as of 2018-02-17.

* gnu/packages/patches/kio-search-smbd-on-PATH.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/kde-frameworks.scm(kio)<source>: Use it.
 2019-01-04 10:10:42 +01:00
Hartmut Goebel
8791aa98a7
gnu: kdelibs4support: Add todo comment for a patch from NixOS. 
* gnu/packages/kde-frameworks.scm(kdelibs4support): Add comment.
 2019-01-04 10:10:41 +01:00
Hartmut Goebel
daff96de1f
gnu: kconfigwidgets: Make QDirIterator follow symlinks. 
Transfer the NixOS patch "qdiriterator-follow-symlinks" for kconfigwidgets as
of 2018-02-17.

* gnu/packages/kde-frameworks.scm(kconfigwidgets)<patch>: New phase.
 2019-01-04 10:10:40 +01:00
Hartmut Goebel
be8cb44a9c
gnu: kcmutils: Print plugin name when loading fails. 
Transfer the NixOS patch "kcmutils-debug-module-loader" for kcmutils as of
2018-02-17.

* gnu/packages/kde-frameworks.scm(kcmutils)<patch>: Add substitute for
  src/kcmoduleloader.cpp.
 2019-01-04 10:10:39 +01:00
Hartmut Goebel
fd8c53cb9e
gnu: kcmutils: Make QDirIterator follow symlinks. 
Transfer the NixOS patch "kcmutils-follow-symlinks" for kcmutils as of
2018-02-17.

* gnu/packages/kde-frameworks.scm(kcmutils)<patch>: New phase.
 2019-01-04 10:10:38 +01:00
Hartmut Goebel
b824dbec5d
gnu: krunner: Blacklist another test failing with 5.49.0. 
* gnu/packages/kde-frameworks.scm(krunner)[#phases]<check-setup>:
  Blacklist 'testMulti'.
 2019-01-04 10:01:08 +01:00
Hartmut Goebel
69b6086182
gnu: extra-cmake-modules: Fix install-path for plugins. 
The respective entry changed for kde-frameworks 5.46.

* gnu/packages/kde-frameworks.scm(krunner)[#phases]<fix-lib-path>:
  Change substitute for QTPLUGINDIR.
 2019-01-04 10:01:08 +01:00
Efraim Flashner
ac277bc7c5
gnu: libsecret: Update to 0.18.7. 
* gnu/packages/gnome.scm (libsecret): Update to 0.18.7.
 2019-01-04 09:20:50 +02:00
Efraim Flashner
0528f70d3d
gnu: goffice: Update to 0.10.44. 
* gnu/packages/gnome.scm (goffice): Update to 0.10.44.
 2019-01-04 09:20:48 +02:00
Alex Vong
5651e74cc6
gnu: guile-gnunet: Update to 0.0-1.d12167a. 
* gnu/packages/gnunet.scm (guile-gnunet): Update to 0.0-1.d12167a.
[version]: Use git-version.
[source]: Use git-file-name.
 2019-01-04 07:34:25 +08:00
Alex Vong
47719c9bc0
gnu: libmicrohttpd: Update to 0.9.62. 
* gnu/packages/gnunet.scm (libmicrohttpd): Update to 0.9.62.
 2019-01-04 07:34:08 +08:00
Alex Vong
8f36c8e9ea
gnu: libextractor: Fix CVE-2018-{20430,20431}. 
* gnu/packages/patches/libextractor-CVE-2018-20430.patch,
gnu/packages/patches/libextractor-CVE-2018-20431.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/gnunet.scm (libextractor)[source]: Use them.
 2019-01-04 07:33:46 +08:00
Alex Vong
1983a9b0a5
gnu: libextractor: Update to 1.8. 
* gnu/packages/gnunet.scm (libextractor): Update to 1.8.
 2019-01-04 07:32:38 +08:00
Ricardo Wurmus
6ec95a003b
gnu: yoshimi: Update to 1.5.10. 
* gnu/packages/music.scm (yoshimi): Update to 1.5.10.
 2019-01-03 23:14:38 +01:00
Kei Kebreau
b634b5c253
gnu: vboot-utils: Fix building on armhf-linux. 
* gnu/packages/bootloaders.scm (vboot-utils)[source]: Add patches.
[arguments]: Conditionally add "HOST_ARCH=arm" to #:make-flags.
* gnu/packages/patches/vboot-utils-fix-format-load-address.patch,
gnu/packages/patches/vboot-utils-fix-tests-show-contents.patch,
gnu/packages/patches/vboot-utils-skip-test-workbuf.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
 2019-01-03 15:40:27 -05:00
Efraim Flashner
824fc425dd
gnu: gnupg: Update to 2.2.12. 
* gnu/packages/gnupg.scm (gnupg): Update to 2.2.12.
 2019-01-03 22:14:22 +02:00
Mathieu Othacehe
fc2982f754
gnu: vlc: Add protobuf to inputs. 
* gnu/packages/video.scm (vlc)[inputs]: Add protobuf.
 2019-01-03 20:38:16 +01:00
Mathieu Othacehe
78d112c2ff
gnu: vlc: Add libmicrodns to inputs. 
* gnu/packages/video.scm (vlc)[inputs]: Add libmicrodns.
 2019-01-03 20:38:16 +01:00
Mathieu Othacehe
498911d315
gnu: Add libmicrodns. 
* gnu/packages/dns.scm (libmicrodns): New package.
 2019-01-03 20:38:16 +01:00
Efraim Flashner
4382cef28c
gnu: xdisorg.scm: Add missing import. 
* gnu/packages/xdisorg.scm: Add missing import.
 2019-01-03 16:25:31 +02:00
Efraim Flashner
fbb456dda1
gnu: bullet: Update to 2.88. 
* gnu/packages/game-development.scm (bullet): Update to 2.88.
[source]: Use 'git-fetch'. Add snippet to remove bundled binaries and
libraries.
[arguments]: Add configure-flags to prevent building demos. Add custom
'remove-failing-tests phase to skip tests which fail after removing
bundled code.
 2019-01-03 16:21:42 +02:00
Rutger Helling
95bf2fb637
gnu: Add wl-clipboard. 
* gnu/packages/xdisorg.scm (wl-clipboard): New variable.
 2019-01-03 14:58:34 +01:00
Danny Milosavljevic
df147c4fdb
gnu: emacs-magit-svn: Fix build. 
* gnu/packages/emacs.scm (emacs-magit-svn): Replace ',name' by
'"emacs-magit-svn"'.
 2019-01-03 10:30:23 +01:00
Maxim Cournoyer
707efe171a
gnu: gnucash: Fix test failure. 
Fixes issue #32057 (see: https://issues.guix.info/issue/32057).

* gnu/packages/patches/gnucash-fix-test-transaction-failure.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/gnucash.scm (gnucash): Use it.
 2019-01-02 17:10:08 -05:00
Efraim Flashner
d804a40a51
gnu: emacs-hydra: Update to 0.14.0. 
* gnu/packages/emacs.scm (emacs-hydra): Update to 0.14.0.
 2019-01-02 22:11:05 +02:00
Efraim Flashner
2e689c22b3
gnu: emacs-edit-indirect: Update to 0.1.5. 
* gnu/packages/emacs.scm (emacs-edit-indirect): Update to 0.1.5.
[source]: Use 'git-fetch'.
 2019-01-02 22:11:05 +02:00
Efraim Flashner
33678041ce
gnu: signing-party: Update to 2.7. 
* gnu/packages/gnupg.scm (signing-party): Update to 2.7.
[home-page]: Update to new home-page.
[arguments]: All phases end with #t.
 2019-01-02 22:11:05 +02:00
Efraim Flashner
c7a2b36daf
gnu: perl-archive-zip: Update to 1.64. 
* gnu/packages/comression.scm (perl-archive-zip): Update to 1.64.
 2019-01-02 22:11:04 +02:00
Efraim Flashner
2f325b6391
gnu: zstd: Update to 1.3.8. 
* gnu/packages/compression.scm (zstd): Update to 1.3.8.
[home-page]: Update to new home-page.
 2019-01-02 22:11:04 +02:00
Efraim Flashner
a1815fe6e1
gnu: perl-yaml-tiny: Update to 1.73. 
* gnu/packages/perl.scm (perl-yaml-tiny): Update to 1.73.
 2019-01-02 22:11:03 +02:00
Efraim Flashner
767e00ec23
gnu: perl-json-maybexs: Update to 1.004000. 
* gnu/packages/perl.scm (perl-json-maybexs): Update to 1.004000.
 2019-01-02 22:11:03 +02:00
Efraim Flashner
150e3b924a
gnu: perl-cpanel-json-xs: Update to 4.08. 
* gnu/packages/perl.scm (perl-cpanel-json-xs): Update to 4.08.
 2019-01-02 22:11:02 +02:00
Efraim Flashner
31d9f55271
gnu: perl-test-mockmodule: Update to 0.170.0. 
* gnu/packages/perl-check.scm (perl-test-mockmodule): Update to 0.170.0.
[source]: Update source uri.
[native-inputs]: Add perl-test-warnings.
 2019-01-02 22:11:02 +02:00
Efraim Flashner
548c120b57
gnu: perl-test-simple: Update to 1.302141. 
* gnu/packages/perl-check.scm (perl-test-simple): Update to 1.302141.
 2019-01-02 22:10:58 +02:00
Efraim Flashner
afbf9763fa
gnu: qtsyncthingtray: Use 'git-fetch'. 
* gnu/packages/sync.scm (qtsyncthingtray)[source]: Use 'git-fetch'.
[arguments]: Update custom 'install phase.
 2019-01-02 19:53:06 +02:00
Efraim Flashner
a69f071537
gnu: owncloud-client: Update to 2.5.1.10973. 
* gnu/packages/sync.scm (owncloud-client): Update to 2.5.1.10973.
* gnu/packages/patches/owncloud-disable-updatecheck.patch: Update patch.
 2019-01-02 19:53:06 +02:00
Efraim Flashner
2879e605bf
gnu: qtkeychain: Update to 0.9.1. 
* gnu/packages/qt.scm (qtkeychain): Update to 0.9.1.
[source]: Use 'git-fetch'.
[arguments]: Update custom 'set-qt-trans-dir phase.
 2019-01-02 19:53:03 +02:00
Ricardo Wurmus
9fb5771af7
gnu: jupyter: Add missing dependency. 
* gnu/packages/python.scm (jupyter)[propagated-inputs]: Add python-qtconsole.
[home-page]: Use https URL.
[arguments]: Update comment on why tests are disabled.
 2019-01-02 16:33:57 +01:00
Ricardo Wurmus
d47b21c69c
gnu: python-terminado: Update to 0.8.1. 
* gnu/packages/python-web.scm (python-terminado): Update to 0.8.1.
 2019-01-02 16:33:57 +01:00
Ricardo Wurmus
38306e1168
gnu: Add python-qtconsole. 
* gnu/packages/python.scm (python-qtconsole): New variable.
 2019-01-02 16:33:57 +01:00
Ricardo Wurmus
91dd8b3687
gnu: python-notebook: Update to 5.7.4. 
* gnu/packages/python.scm (python-notebook): Update to 5.7.4.
[arguments]: Use INVOKE for tests.
[propagated-inputs]: Remove python-ipython; add python-prometheus-client,
python-send2trash, and python-terminado.
 2019-01-02 16:33:57 +01:00
Ricardo Wurmus
493e5e6daa
gnu: python-jupyter-console: Fix inputs. 
* gnu/packages/python.scm (python-jupyter-console)[propagated-inputs]: Remove
python-ipython; replace python-prompt-toolkit with python-prompt-toolkit-1.
[native-inputs]: Add python-nose.
 2019-01-02 16:33:57 +01:00
Ricardo Wurmus
4fc112b452
gnu: python-ipython: Remove dependency on python-jupyter-core-minimal. 
* gnu/packages/python.scm (python-ipython)[propagated-inputs]: Remove
python-jupyter-core-minimal.
 2019-01-02 16:33:57 +01:00
Ricardo Wurmus
88bf9be38e
gnu: python-ipywidgets: Enable tests. 
* gnu/packages/python.scm (python-ipywidgets)[arguments]: Remove.
[native-inputs]: Add python-nose and python-pytest.
[propagated-inputs]: Remove python-ipykernel.
 2019-01-02 16:33:57 +01:00
Ricardo Wurmus
fec14302d5
gnu: python-widgetsnbextension: Update to 3.4.2. 
* gnu/packages/python.scm (python-widgetsnbextension): Update to 3.4.2.
[propagated-inputs]: Add python-ipykernel.
 2019-01-02 16:33:57 +01:00
Ricardo Wurmus
b6fc288e57
gnu: Add python-send2trash. 
* gnu/packages/python.scm (python-send2trash, python2-send2trash): New
variables.
 2019-01-02 16:33:57 +01:00
Ricardo Wurmus
abe50aa369
gnu: Add python-prometheus-client. 
* gnu/packages/python.scm (python-prometheus-client,
python2-prometheus-client): New variables.
 2019-01-02 16:33:57 +01:00
Ricardo Wurmus
ffabccb22f
gnu: python-jupyter-client: Update to 5.2.4. 
* gnu/packages/python.scm (python-jupyter-client): Update to 5.2.4.
 2019-01-02 16:33:57 +01:00
Ricardo Wurmus
75246daff2
gnu: python-ipython: Break dependency on python-ipykernel. 
* gnu/packages/python.scm (python-ipython)[propagated-inputs]: Remove
python-ipykernel.
[arguments]: Delete more broken tests.
 2019-01-02 16:33:57 +01:00
Ricardo Wurmus
f0eb442c20
gnu: python-ipykernel: Update to 5.1.0. 
* gnu/packages/python.scm (python-ipykernel): Update to 5.1.0.
[arguments]: Enable tests.
[propagated-inputs]: Add python-ipython.
[native-inputs]: Add python-pytest and python-nose.
 2019-01-02 16:33:57 +01:00