Commit graph

126556 commits

Author SHA1 Message Date
Timotej Lazar
c9a7cbf0b7
gnu: syncthing: Update to 1.25.0.
* gnu/packages/syncthing.scm (syncthing): Update to 1.25.0.

Change-Id: I39ebd12e96fb09386cf51bd42cd5241f3820c16c
Signed-off-by: Christopher Baines <mail@cbaines.net>
2023-11-03 10:14:06 +00:00
Artyom V. Poptsov
ada2152893
gnu: go-github-com-hjson-hjson-go: Update to 4.3.1.
* gnu/packages/golang.scm (go-github-com-hjson-hjson-go): Update to 4.3.1.

Change-Id: Iee2aef614686cbf79f388e2dd9435745d5502e2a
Signed-off-by: Christopher Baines <mail@cbaines.net>
2023-11-03 10:14:06 +00:00
Benjamin
66ff9c82a3
gnu: neovim: Update to 0.9.4.
* gnu/packages/vim.scm (neovim): Update to 0.9.4.

Change-Id: I7246390c69875cbc1d7442afe38abd31ce85616b
Signed-off-by: Christopher Baines <mail@cbaines.net>
2023-11-03 10:01:29 +00:00
Julien Lepiller
9024524de1
gnu: guile-netlink: Update to 1.2.1.
* gnu/packages/guile-xyz.scm (guile-netlink): Update to 1.2.1.

Change-Id: I3018cf7e0b6cd460bf27b8bbe1b031cf0dafe547
Signed-off-by: Christopher Baines <mail@cbaines.net>
2023-11-03 10:00:41 +00:00
Jaeme Sifat
809f461ec1
gnu: foot: Update to 1.16.2.
* gnu/packages/terminals.scm (foot): Update to 1.16.2.
[arguments]: Use gexps.

Change-Id: I0615f6251a918a572369c05b126853f79e9fca4c
Signed-off-by: Christopher Baines <mail@cbaines.net>
2023-11-03 09:59:41 +00:00
Kaelyn Takata
ada7e0d042
gnu: wine-minimal: Update to 8.18.
* gnu/packages/wine.scm (wine-minimal): Update to 8.18.
[properties]: Set upstream-name.

Change-Id: I018c320a990bf101d193095b68c44312ce9653a4
Signed-off-by: Christopher Baines <mail@cbaines.net>
2023-11-03 09:56:01 +00:00
Simon Tournier
4471cfd099
gnu: emacs-ox-rss: Update upstream URL.
* gnu/packages/emacs-xyz.scm (emacs-ox-rss)[source]: Update upstream URL.

Change-Id: I66f0aa2cf5ee08705a89d0683e638e3fa1e1fb12
Signed-off-by: Christopher Baines <mail@cbaines.net>
2023-11-03 09:46:02 +00:00
Timotej Lazar
5378149acc
gnu: msmtp: Update to 1.8.25.
* gnu/packages/mail.scm (msmtp): Update to 1.8.25.

Change-Id: If6a03b52734fa09dc6e8ffa5dd893f7d80b86aac
Signed-off-by: Christopher Baines <mail@cbaines.net>
2023-11-03 09:46:02 +00:00
Timotej Lazar
93b8d2e730
gnu: wlr-randr: Update to 0.3.1.
* gnu/packages/wm.scm (wlr-randr): Update to 0.3.1.

Change-Id: I1b0d9ae20c9c4a249b3679431101edfa61e39d44
Signed-off-by: Christopher Baines <mail@cbaines.net>
2023-11-03 09:46:02 +00:00
Cayetano Santos
a4ec0c6ca0
gnu: emacs-mastodon: Update to 1.0.13.
* gnu/packages/emacs-xyz.scm (emacs-mastodon): Update to 1.0.13.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2023-11-03 09:46:02 +00:00
Timotej Lazar
399cd64bc9
gnu: asciinema: Update to 2.4.0.
* gnu/packages/terminals.scm (asciinema): Update to 2.4.0.

Change-Id: I3e0fc7cc16aaebdf8346bb715f07021a5d568163
Signed-off-by: Christopher Baines <mail@cbaines.net>
2023-11-03 09:46:02 +00:00
Felix Gruber
1853fd9c2f
gnu: strawberry: Update to 1.0.21.
* gnu/packages/music.scm (strawberry): Update to 1.0.21.
[inputs]: Add libebur128.

Change-Id: I2f0094ab1f87301cbf05c13ca5742bb03703b0b4
Signed-off-by: Christopher Baines <mail@cbaines.net>
2023-11-03 09:46:02 +00:00
kiasoc5
e20ef7d2d1
gnu: dragonfly-reverb: Update to 3.2.10.
* gnu/packages/music.scm (dragonfly-reverb): Update to 3.2.10.

Change-Id: I4b0dc4e7aeae381467690305b9551e53341ef8b7
Signed-off-by: Christopher Baines <mail@cbaines.net>
2023-11-03 09:46:02 +00:00
Afkhami, Navid
28ebbe2be8
gnu: Add r-matrixtests.
* gnu/packages/cran.scm (r-matrixtests): New variable.

Change-Id: I62f7bd760fc8603425906c304ef4293da1c0cf61
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2023-11-02 18:34:09 +01:00
Afkhami, Navid
64dbce8381
gnu: Add r-nestedcv.
* gnu/packages/cran.scm (r-nestedcv): New variable.

Change-Id: Id998b4192565c220f8d238963ef61217aed12bd3
2023-11-02 18:34:09 +01:00
Jelle Licht
f5346094f0
gnu: emacs-cider: Include enrich-classpath wrapper scripts.
* gnu/packages/emacs-xyz.scm (emacs-cider)[arguments]<#:include>: Add
"^lein\\.sh$" and "^clojure\\.sh$" to the list of regexes for installed files.

Change-Id: I02507d3cd012dbe827751a21870e4bc1f13d93b5
Signed-off-by: Andrew Tropin <andrew@trop.in>
2023-11-02 10:01:22 +04:00
Jelle Licht
0f2ec2117b
gnu: emacs-cider: Update to 1.9.0.
* gnu/packages/emacs-xyz.scm (emacs-cider): Update to 1.9.0.

Change-Id: I25c511e93bdd7ec19a74ef10d0b5527a9e0b922d
Signed-off-by: Andrew Tropin <andrew@trop.in>
2023-11-02 10:01:21 +04:00
Jelle Licht
7c2d36d014
gnu: emacs-clj-refactor: Update to 3.10.0.
* gnu/packages/emacs-xyz.scm (emacs-clj-refactor): Update to 3.10.0.

Change-Id: Idef5f44e2e3a8ed149d46ba2307184ffee21de4b
Signed-off-by: Andrew Tropin <andrew@trop.in>
2023-11-02 10:01:20 +04:00
Jelle Licht
1ebc1651a6
gnu: emacs-clojure-mode: Update to 5.18.0.
* gnu/packages/emacs-xyz.scm (emacs-clojure-mode): Update to 5.18.0.

Change-Id: I84cadfe0af5e1635abd02593e4f5f02b53645b39
Signed-off-by: Andrew Tropin <andrew@trop.in>
2023-11-02 10:01:19 +04:00
Jelle Licht
a5c7ceda0a
gnu: emacs-org-contrib: Remove dependency on emacs-cider.
Since version 0.4 the ob-clojure-literate.el file with a dependency on cider
was removed from org-contrib.

* gnu/packages/emacs-xyz.scm (emacs-org-contrib)[native-inputs]: Remove
emacs-cider.

Change-Id: I838e965a819d9793424b6310ae324460b260afcc
Signed-off-by: Andrew Tropin <andrew@trop.in>
2023-11-02 10:01:18 +04:00
Ricardo Wurmus
0647f308b4
gnu: r-rjava: Use OpenJDK 11.
See https://github.com/s-u/rJava/issues/307.

* gnu/packages/cran.scm (r-rjava)[arguments]: Use search-input-file.
[inputs]: Replace icedtea-8 with openjdk11.

Change-Id: I9e67210f1bfd585fb53845dad55a56a639a5d806
2023-11-01 19:33:38 +01:00
Maxim Cournoyer
a96f1c1bc0
teams.scm: Add file-local variable prop line for the mode.
This tells Emacs to use the scheme-mode to edit the file.

* etc/teams.scm (mode): New file-local variable.

Change-Id: I9a48f552e831317402673d95cf6c1de506d388b5
2023-11-01 12:24:29 -04:00
Julien Lepiller
c95104c2e9
doc: contributiong: Fix ref usage.
Previous usage renders as "see See Teams".

* doc/contributing.texi: Fix ref usage.

Change-Id: I97a91697ecb87d07cc3c962a79d87dd290a70a7c
2023-11-01 17:20:17 +01:00
Florian Pelz
938a47c86d
nls: Update translations.
Change-Id: I432aec0ea31ead192d6444c96dc42038f5c7ab9a
2023-10-31 23:01:37 +01:00
Simon Tournier
3991d9e4d9
Revert "gnu: lvm2: Remove systemd rule."
This reverts commit c0895371c5, which does not
correctly fix the issue, as reported by Josselin Poiret <dev@jpoiret.xyz> in
<https://issues.guix.gnu.org/issue/66586#6>.
2023-10-31 22:15:33 +01:00
Afkhami, Navid
b963bf6b1d
gnu: python-baltica: Add missing R inputs.
* gnu/packages/bioinformatics.scm (python-baltica)[propagated-inputs]: Add
r-biocmanager, r-dplyr, r-genomicranges, r-here, r-openxlsx, r-optparse,
r-readr, r-rsamtools, r-stringr, r-tidyr, r-upsetr, and r-yaml.
[description]: Add an extra space after a period.

Change-Id: I8c1bb556048b406b95e081155a46da17a6be5676
2023-10-31 22:03:24 +01:00
Ricardo Wurmus
4254269ad5
gnu: r-logspline: Update to 2.1.21.
* gnu/packages/statistics.scm (r-logspline): Update to 2.1.21.

Change-Id: Ib4ec6124282851bcc52eb87f7e30027e801f0531
2023-10-31 21:57:59 +01:00
Ricardo Wurmus
0858b9c472
gnu: r-withr: Update to 2.5.2.
* gnu/packages/statistics.scm (r-withr): Update to 2.5.2.

Change-Id: Ie4265bc4a6d9c54e3f64ab12ae0d14c716b4e03f
2023-10-31 21:57:59 +01:00
Ricardo Wurmus
90a8594c7b
gnu: r-checkmate: Update to 2.3.0.
* gnu/packages/statistics.scm (r-checkmate): Update to 2.3.0.

Change-Id: I0599e3a4e174cc311c37d7c334087eda15deafc1
2023-10-31 21:57:59 +01:00
Ricardo Wurmus
76a12b07d1
gnu: r-dbplyr: Update to 2.4.0.
* gnu/packages/statistics.scm (r-dbplyr): Update to 2.4.0.

Change-Id: I8cf5c1b47b47a41b606e76d0b5e14425946f0903
2023-10-31 21:57:59 +01:00
Ricardo Wurmus
e2d4dd5e1c
gnu: r-knitr: Update to 1.45.
* gnu/packages/statistics.scm (r-knitr): Update to 1.45.

Change-Id: I1317366a0041f29b284e24d056734498f9d35cd7
2023-10-31 21:57:59 +01:00
Ricardo Wurmus
4f4ab05dc4
gnu: r-strex: Update to 1.6.1.
* gnu/packages/cran.scm (r-strex): Update to 1.6.1.

Change-Id: Id37ef19901a3548128816e2677148405b5845297
2023-10-31 21:57:59 +01:00
Ricardo Wurmus
a14e534dbd
gnu: r-seuratobject: Update to 5.0.0.
* gnu/packages/cran.scm (r-seuratobject): Update to 5.0.0.
[propagated-inputs]: Add r-generics, r-lifecycle, and r-spam.

Change-Id: I8486d42c1f9d3e5f4b9fc091a4d4aab7b1c803b6
2023-10-31 21:57:59 +01:00
Ricardo Wurmus
75db05d7db
gnu: r-rfast: Update to 2.0.9.
* gnu/packages/cran.scm (r-rfast): Update to 2.0.9.
[propagated-inputs]: Add r-rcppparallel.

Change-Id: I551a2b1745b937454b5aad99f4620839f9a89902
2023-10-31 21:57:59 +01:00
Ricardo Wurmus
d0013cb066
gnu: r-spatstat: Update to 3.0-7.
* gnu/packages/cran.scm (r-spatstat): Update to 3.0-7.

Change-Id: I8c54279b92acb7532b1050613a60ba2e96c115eb
2023-10-31 21:57:59 +01:00
Ricardo Wurmus
12167e57e8
gnu: r-spatstat-linnet: Update to 3.1-3.
* gnu/packages/cran.scm (r-spatstat-linnet): Update to 3.1-3.

Change-Id: I7f1dadd2e8fecf03cbde3c56de3a3384ba8cf24d
2023-10-31 21:57:58 +01:00
Ricardo Wurmus
8638f87510
gnu: r-posterior: Update to 1.5.0.
* gnu/packages/cran.scm (r-posterior): Update to 1.5.0.

Change-Id: I3fa7adca749efcbe0d8b6ab0f707e70a1e895d2d
2023-10-31 21:57:58 +01:00
Ricardo Wurmus
bd15e8babf
gnu: r-adagio: Update to 0.9.2.
* gnu/packages/cran.scm (r-adagio): Update to 0.9.2.

Change-Id: I2131b973194fcf710fed1ac4c425717278269308
2023-10-31 21:57:58 +01:00
Ricardo Wurmus
199f6a9967
gnu: r-rintrojs: Update to 0.3.3.
* gnu/packages/cran.scm (r-rintrojs): Update to 0.3.3.

Change-Id: I184740e9bd1ed8d087c2985d08b12f4fe31d72b7
2023-10-31 21:57:58 +01:00
Ricardo Wurmus
8aafa8bd45
gnu: r-sampling: Update to 2.10.
* gnu/packages/cran.scm (r-sampling): Update to 2.10.

Change-Id: I7a3407c77fb71a8a4355415beeee09edc2a8908c
2023-10-31 21:57:58 +01:00
Ricardo Wurmus
8ab1ea6850
gnu: r-polspline: Update to 1.1.24.
* gnu/packages/cran.scm (r-polspline): Update to 1.1.24.

Change-Id: I323fc3b50c1d215d749cd814a684463810e4bfc4
2023-10-31 21:57:58 +01:00
Ricardo Wurmus
d034d0a1a0
gnu: r-grimport2: Update to 0.3-1.
* gnu/packages/cran.scm (r-grimport2): Update to 0.3-1.

Change-Id: I6b7de08f4d24a3398e8b788fbe726792ac38a59a
2023-10-31 21:57:58 +01:00
Ricardo Wurmus
2fec2b0a7a
gnu: r-gridpattern: Update to 1.1.1.
* gnu/packages/cran.scm (r-gridpattern): Update to 1.1.1.

Change-Id: I63bc1df4fc6f8f5e9931a6a82db68df0e933a1cb
2023-10-31 21:57:58 +01:00
Ricardo Wurmus
05e2f170f7
gnu: r-performance: Update to 0.10.8.
* gnu/packages/cran.scm (r-performance): Update to 0.10.8.

Change-Id: Ic0c7a1f1402ae5a63bf433fd2f874e24eab5a216
2023-10-31 21:57:58 +01:00
Ricardo Wurmus
d7244ece08
gnu: r-wrs2: Update to 1.1-5.
* gnu/packages/cran.scm (r-wrs2): Update to 1.1-5.
[propagated-inputs]: Remove r-mc2d.

Change-Id: I0346e018b401143b4f9cf65845cf4d3b210ed54b
2023-10-31 21:57:58 +01:00
Ricardo Wurmus
62ad4b2566
gnu: r-rbibutils: Update to 2.2.16.
* gnu/packages/cran.scm (r-rbibutils): Update to 2.2.16.

Change-Id: I188dddbb7fa03f43574e50d43f741c5398e7c331
2023-10-31 21:57:58 +01:00
Ricardo Wurmus
d941cec521
gnu: r-lambertw: Update to 0.6.9.
* gnu/packages/cran.scm (r-lambertw): Update to 0.6.9.

Change-Id: Ia36a96ddd78585768b88ab662d5c5ba31aa40744
2023-10-31 21:57:58 +01:00
Ricardo Wurmus
e11a490138
gnu: r-mbess: Update to 4.9.3.
* gnu/packages/cran.scm (r-mbess): Update to 4.9.3.

Change-Id: I8ada8e1a56b7497145409de82865d5d9d83da6e3
2023-10-31 21:57:58 +01:00
Ricardo Wurmus
8e44a14be6
gnu: r-poorman: Update to 0.2.7.
* gnu/packages/cran.scm (r-poorman): Update to 0.2.7.

Change-Id: I9c23bd2bbba0eb6f6b2b6b6ac1cc11524b5c6980
2023-10-31 21:57:58 +01:00
Ricardo Wurmus
03c1f71501
gnu: r-consort: Update to 1.2.1.
* gnu/packages/cran.scm (r-consort): Update to 1.2.1.

Change-Id: I28d1749044a38f9a9144eeb5675d6607bf973c53
2023-10-31 21:57:58 +01:00