Commit graph

1432 commits

Author SHA1 Message Date
Mark H Weaver
e3df6938ac
gnu: libtasn1: Add replacement to fix CVE-2017-10790.
Based on commit 01a61d7040
by Leo Famulari <leo@famulari.name>.

* gnu/packages/patches/libtasn1-CVE-2017-10790.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/tls.scm (libtasn1)[replacement]: New field.
(libtasn1/fixed): New variable.
2017-08-06 00:21:09 -04:00
Marius Bakke
aa9780daf9
Merge branch 'master' into core-updates 2017-08-01 23:42:28 +02:00
Ludovic Courtès
04b6d6f7f7
gnu: guile-ssh: Update to 0.11.2.
* gnu/packages/ssh.scm (guile-ssh): Update to 0.11.2.
[source]: Remove 'patches', 'modules', and 'snippet'.
* gnu/packages/patches/guile-ssh-channel-finalization.patch,
gnu/packages/patches/guile-ssh-double-free.patch,
gnu/packages/patches/guile-ssh-rexec-bug.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Remove them.
2017-08-01 15:32:07 +02:00
Muriithi Frederick Muriuki
269504a797
gnu: python-pbr-minimal: Update to 3.0.1
* gnu/packages/python.scm (python-pbr-minimal): Update to 3.0.1
[source]: Update hash and remove patch.
* gnu/packages/patches/python-pbr-fix-man-page-support.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2017-08-01 15:21:52 +03:00
Ludovic Courtès
58dce7bfb5
gnu: libgit2: Update to 0.26.0.
* gnu/packages/version-control.scm (libgit2): Update to 0.26.0.  Remove
"libgit2-use-after-free.patch".
* gnu/packages/patches/libgit2-use-after-free.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-07-31 15:23:05 +02:00
Peter Mikkelsen
a4078acf4a
gnu: erlang: Fix man-pages search path of 'erl -man'.
* gnu/packages/patches/erlang-man-path.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/erlang.scm (erlang)[source]: Use it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-07-29 23:03:47 +02:00
Marius Bakke
e0b9e377f1
Merge branch 'master' into core-updates 2017-07-28 00:34:13 +02:00
Marius Bakke
bd51224936
gnu: nss, nss-certs: Update to 3.32.
This release includes minor code changes and many certificate updates:
<https://developer.mozilla.org/en-US/docs/Mozilla/Projects/NSS/NSS_3.32_release_notes>

* gnu/packages/certs.scm (nss-certs): Update to 3.32.
* gnu/packages/gnuzilla.scm (nss): Update to 3.32.
[arguments]: Prevent another test file from being installed.
* gnu/packages/patches/nss-pkgconfig.patch: Adjust.
2017-07-28 00:07:28 +02:00
Kei Kebreau
8ad40a69d1
gnu: evince: Update to 3.24.1.
* gnu/packages/gnome.scm (evince): Update to 3.24.1.
[source]: Remove obsolete patch.
* gnu/packages/patches/evince-CVE-2017-1000083.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-07-25 18:41:05 -04:00
Kei Kebreau
c7db7b86ce
gnu: perl-dbd-mysql: Fix CVE-2017-10788.
* gnu/packages/patches/perl-dbd-mysql-CVE-2017-10788.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/databases.scm (perl-dbd-mysql)[source]: Use it.
2017-07-25 14:11:20 -04:00
Ludovic Courtès
726ecfeb3a
gnu: Add guile2.0-bytestructures.
* gnu/packages/patches/guile-bytestructures-name-clash.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/guile.scm (guile-bytestructures)[source]: Use it.
[arguments]: Unpack the source.
[native-inputs]: New field.
(guile2.0-bytestructures): New variable.
2017-07-25 17:46:17 +02:00
Christopher Baines
d61a894bfa
gnu: gnome: Add deja-dup.
* gnu/packages/gnome.scm (deja-dup): New variable.
* gnu/packages/patches/deja-dup-use-ref-keyword-for-iter.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patch file entry.
2017-07-24 20:05:49 +01:00
Ben Woodcroft
d3dce32216
gnu: metabat: Fix boost-related compilation issue.
Reported by Leo Famulari.

* gnu/packages/patches/metabat-fix-boost-issue.patch: New file.
* gnu/packages/bioinformatics.scm (metabat): Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2017-07-23 22:35:52 +10:00
Leo Famulari
6c1a317e29
Merge branch 'master' into core-updates 2017-07-23 03:42:12 -04:00
Ben Woodcroft
f3f68a442c
gnu: metabat: Update to 2.11.1.
* gnu/packages/bioinformatics.scm (metabat): Update to 2.11.1.
[source]: Add patch to fix compilation.
[arguments]: Adjust regular expressions modifying 'SConstruct'.
* gnu/packages/patches/metabat-fix-compilation.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2017-07-23 10:29:36 +10:00
Ben Woodcroft
0620387a59
gnu: bcftools: Update to 1.5.
* gnu/packages/bioinformatics.scm (bcftools): Update to 1.5.
[origin]: Remove fix-makefile patch.
[arguments]: Add configure flags, add LIBS make flag.  Do not delete
configure phase.
* gnu/packages/patches/bcftools-fix-makefile.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-07-23 10:29:36 +10:00
Ben Woodcroft
98593f9f51
gnu: bcftools: Update to 1.4.1.
* gnu/packages/bioinformatics.scm (bcftools): Update to 1.4.1.
[arguments]: Move Makefile modifications from here ...
[source]: ... to added patch.  Adjust patch for update to 1.4.
* gnu/packages/patches/bcftools-fix-makefile.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2017-07-23 10:29:35 +10:00
Ryan Moe
36378bd57e
gnu: quassel: Enable TLS.
* gnu/packages/patches/quassel-fix-tls-check.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/irc.scm (quassel)[source]: Use it.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-07-22 20:04:53 -04:00
Marius Bakke
aa51da7eef
gnu: Remove python-fake-factory leftovers.
This is a followup to c799eb2eb8.

* gnu/packages/patches/python-fake-factory-fix-build-32bit.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-07-22 15:07:45 +02:00
Marius Bakke
2580c2f07f
gnu: python-pyopenssl: Update to 17.2.0.
* gnu/packages/patches/python-pyopenssl-17.1.0-test-overflow.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/python.scm (python-pyopenssl, python2-pyopenssl): Update to 17.2.0.
[native-inputs]: Add PYTHON-FLAKY.
[source](patches): Remove.
2017-07-22 14:31:28 +02:00
Alex Vong
81c35029d4
gnu: heimdal: Fix CVE-2017-{6594,11103}.
* gnu/packages/patches/heimdal-CVE-2017-6594.patch,
gnu/packages/patches/heimdal-CVE-2017-11103.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/kerberos.scm (heimdal)[source]: Use them.
2017-07-20 15:33:53 -04:00
Leo Famulari
8582e03ae5
gnu: Remove a left-over patch.
This is a followup to commit 426b0b898f.

* gnu/packages/patches/pcre-CVE-2017-7186.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-07-20 09:00:36 -04:00
Jonathan Brielmaier
05c8851695
gnu: Add libusb@0.1.
* gnu/packages/libusb.scm (libusb-0.1): New variable.
* gnu/packages/patches/libusb-0.1-disable-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-07-20 00:54:52 +02:00
Ludovic Courtès
2acfe022a7
gnu: guile-static-stripped: Update to 2.2.
* gnu/packages/make-bootstrap.scm (%guile-static): Replace GUILE-2.0
with GUILE-2.2.  Use "guile-2.2-default-utf8.patch" instead of
"guile-default-utf8.patch".
* gnu/packages/patches/guile-2.2-default-utf8.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2017-07-18 15:31:12 +02:00
Ludovic Courtès
920f2c42ce
gnu: guile: Make relocatable patch version-independent.
* gnu/packages/patches/guile-relocatable.patch: Use
SCM_EFFECTIVE_VERSION instead of "2.0".
2017-07-18 15:31:12 +02:00
Leo Famulari
4c4485f304
gnu: qemu: Fix CVE-2017-11334.
* gnu/packages/patches/qemu-CVE-2017-11334.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/virtualization.scm (qemu)[source]: Use it.
2017-07-17 23:47:03 -04:00
Leo Famulari
144c8db9bd
gnu: chicken: Fix CVE-2017-11343.
* gnu/packages/patches/chicken-CVE-2017-11343.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/scheme.scm (chicken)[source]: Use it.
2017-07-17 23:47:00 -04:00
Efraim Flashner
7ad2a4f1d5
gnu: supertuxkart: Fix build on aarch64.
* gnu/packages/games.scm (supertuxkart)[source]: Add patch.
* gnu/packages/patches/supertuxkart-angelscript-ftbfs.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2017-07-17 15:29:56 +03:00
Ricardo Wurmus
5beecc320e
gnu: Add sooperlooper.
* gnu/packages/patches/sooperlooper-build-with-wx-30.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/music.scm (sooperlooper): New variable.
2017-07-17 14:01:47 +02:00
Marius Bakke
5887d554ec
gnu: evince: Fix CVE-2017-1000083.
* gnu/packages/patches/evince-CVE-2017-1000083.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gnome.scm (evince)[source]: Use it.
2017-07-13 21:11:15 +02:00
Ludovic Courtès
2f0d1b9dd2
gnu: ath9k-htc-firmware: Adjust Binutils patch to 2.28.
* gnu/packages/patches/ath9k-htc-firmware-binutils.patch: Remove last
hunk, which is now in Binutils 2.28.
2017-07-13 00:28:07 +02:00
Leo Famulari
d89ce52096
gnu: spice: Fix CVE-2017-7506.
* gnu/packages/patches/spice-CVE-2017-7506.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/spice.scm (spice)[source]: Use it.
2017-07-12 16:27:40 -04:00
Kei Kebreau
082725b502
gnu: hop: Update to 3.1.0-pre2.
* gnu/packages/scheme.scm (hop): Update to 3.1.0-pre2.
[source]: Remove unnecessary patch.
[arguments]: Enable tests; disable parallel building; specify BIGLOO in
make-flags.
[inputs]: Add libgc, libunistring, libuv, pcre and sqlite.
* gnu/local.mk (dist_patch_DATA): Remove unnecessary patch.
* gnu/packages/patches/hop-linker-flags.patch: Delete file.
2017-07-10 19:35:44 -04:00
Kei Kebreau
5e3ea571c5
gnu: bigloo: Update to 4.3a.
* gnu/packages/scheme.scm (bigloo): Update to 4.3a.
[source]: Remove old patch. Add snippet.
[arguments]: Adjust the build phases accordingly.
[inputs]: Add libgc, libunistring, libuv, openssl, pcre and sqlite.
2017-07-10 19:35:44 -04:00
Leo Famulari
c8eb2b8c60
Merge branch 'master' into core-updates 2017-07-10 14:37:53 -04:00
Leo Famulari
61adfb00b1
gnu: libtiff: Fix two integer overflows.
* gnu/packages/patches/libtiff-tiffycbcrtorgb-integer-overflow.patch,
gnu/packages/patches/libtiff-tiffycbcrtorgbinit-integer-overflow.patch:
New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/image.scm (libtiff-4.0.8)[source]: Use them.
2017-07-10 13:31:58 -04:00
Leo Famulari
625e7cd654
gnu: ncurses: Fix CVE-2017-10684 and CVE-2017-10685.
* gnu/packages/patches/ncurses-CVE-2017-10684-10685.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/ncurses.scm (ncurses)[replacement]: New field.
(ncurses/fixed): New variable.
2017-07-10 13:31:58 -04:00
Mark H Weaver
ef019092b9
gnu: poppler: Fix null pointer dereferences.
* gnu/packages/patches/poppler-fix-crash-with-broken-documents.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/pdf.scm (poppler/fixed)[source]: Add the patch.
2017-07-10 12:59:07 -04:00
Danny Milosavljevic
ad22c71853
gnu: ghostscript: Make "/CreationDate", "/ModDate" optional, depending on environment variable.
* gnu/packages/patches/ghostscript-no-header-creationdate.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/ghostscript.scm (ghostscript): Use it.
2017-07-10 18:20:32 +02:00
Danny Milosavljevic
63eb4a2a91
gnu: ghostscript: Make XMP UUID headers optional, depending on environment variable.
* gnu/packages/patches/ghostscript-no-header-uuid.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/ghostscript.scm (ghostscript): Use it.
2017-07-10 18:20:25 +02:00
Danny Milosavljevic
5c549f2eac
gnu: ghostscript: Make "/ID" optional, depending on environment variable.
* gnu/packages/patches/ghostscript-no-header-id.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it
* gnu/packages/ghostscript.scm (ghostscript): Use it.
2017-07-10 18:20:16 +02:00
Danny Milosavljevic
9146543f8d
gnu: groff: Remove timestamps.
Fixes <https://bugs.gnu.org/27593>.

* gnu/packages/patches/groff-source-date-epoch.patch: New file.
* gnu/local.mk: Add it.
* gnu/packages/groff.scm (groff)[source]: Add it.
2017-07-10 12:37:03 +02:00
Ricardo Wurmus
b81dd94a79
gnu: dblatex: Use texlive-union.
* gnu/packages/patches/dblatex-remove-multirow.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/docbook.scm (dblatex)[source]: Use patch.
[inputs]: Replace "texlive" with a texlive-union.
2017-07-09 17:07:39 +02:00
Leo Famulari
b3cc304b30
gnu: poppler: Use an ABI-compatible replacement to fix CVE-2017-9776.
This is a followup to commit 95bbaa02aa.
See <https://bugs.gnu.org/27621> for more information.

Poppler 0.56.0's ABI is not compatible with Poppler 0.52.0, so it's not
possible to graft the newer version in place of the older one.

This change leaves CVE-2017-9775 unfixed for now.

* gnu/packages/patches/poppler-CVE-2017-9776.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/pdf.scm (poppler-0.56.0): Replace with ...
(poppler/fixed): ... new variable.
(poppler)[replacement]: Replaced with poppler/fixed.
2017-07-09 02:25:27 -04:00
Ben Woodcroft
4732e6ee84
gnu: blast+: Update to 2.6.0.
* gnu/packages/bioinformatics.scm (blast+): Update to 2.6.0.
[origin]: Remove bundled pcre.  Add patch.
[arguments]: Replace paths in run_with_lock.c.  Configure with pcre.
[inputs]: Add pcre, perl, python.
* gnu/packages/patches/blast+-fix-makefile.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2017-07-08 12:05:59 +10:00
Marius Bakke
d28f90bed9
gnu: python-pyopenssl: Fix test failure on 32-bit platforms.
* gnu/packages/patches/python-pyopenssl-17.1.0-test-overflow.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python-pyopenssl)[source]: Use it.
2017-07-07 18:43:16 +02:00
Ludovic Courtès
7f0980839e
gnu: wget: Fix compilation with Perl 5.26; skip faulty tests.
* gnu/packages/wget.scm (wget)[arguments]: New field.
[source](patches): Add "wget-perl-5.26.patch".
* gnu/packages/patches/wget-perl-5.26.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2017-07-07 17:07:16 +02:00
Alex Vong
dab536fe1a
gnu: libtiff: Fix CVE-2017-{9936,10688}.
* gnu/packages/patches/libtiff-CVE-2017-9936.patch,
gnu/packages/patches/libtiff-CVE-2017-10688.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/image.scm (libtiff-4.0.8)[source]: Use them.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-07-07 00:06:37 -04:00
Kei Kebreau
ab104672e1
gnu: xorg-server: Fix CVE-2017-{10971,10972}.
* gnu/packages/patches/xorg-server-CVE-2017-10971.patch,
gnu/packages/patches/xorg-server-CVE-2017-10972.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/xorg.scm (xorg-server)[source]: Use them.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-07-06 23:52:22 -04:00
Efraim Flashner
ce7e361fa3
gnu: gemma: Fix building on non-Intel architectures.
* gnu/packages/patches/gemma-intel-compat.patch: New file.
* gnu/packages/bioinformatics.scm (gemma)[source]: Add patch.
[arguments]: Add NO_INTEL_COMPAT flag on non-Intel architectures.
* gnu/local.mk (dist_patch_DATA): Register patch.
2017-07-04 22:55:44 +03:00