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Author SHA1 Message Date
Rutger Helling
42e52605d4
gnu: xpra: Fix paths. 
* gnu/packages/xorg.scm (xpra): [arguments]: Add '--without-opengl',
'--without-Xdummy' and '--without-Xdummy-wrapper' to #:configure-flags. Add
substitutions to #phases for proper paths.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-11-16 10:21:40 +01:00
Rutger Helling
d9cd1c2272
gnu: messaging: Enable OMEMO for dino. 
* gnu/packages/messaging.scm (dino): Update to commit
f6ac5bbd26638412a2289fd1d28ef12de1d7e8b5.
[inputs]: Add libsignal-protocol-c and libgcrypt.
[arguments]: Change #configure-flags to "-DSHARED_SIGNAL_PROTOCOL=yes".

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-11-16 09:50:06 +01:00
Rutger Helling
0d549f60df
gnu: messaging: Add libsignal-protocol-c. 
* gnu/packages/messaging.scm (libsignal-protocol-c): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-11-16 09:42:45 +01:00
Ludovic Courtès
589e3f4e70
gnu: Move more packages from python to python-web. 
* gnu/packages/python.scm (python-requests, python2-requests)
(python-requests-2.7, python-oauthlib, python2-oauthlib)
(python-furl, python2-furl, python-wsgi-intercept)
(python-publicsuffix, python2-publicsuffix)
(python-publicsuffix2, python2-publicsuffix2): Move to...
* gnu/packages/python-web.scm: ... here.
* gnu/packages/bioinformatics.scm, gnu/packages/finance.scm:
gnu/packages/maths.scm, gnu/packages/terminals.scm,
gnu/packages/video.scm, gnu/packages/virtualization.scm: Adjust
accordingly.
 2017-11-16 08:45:15 +01:00
Ludovic Courtès
b95c17c58b
gnu: Move Python packages from crypto to python-crypto. 
* gnu/packages/crypto.scm (python-asn1crypto, python2-asn1crypto)
(python-pynacl, python2-roca-detect): Move to python-crypto.scm.
* gnu/packages/gnupg.scm (python2-pgpdump): Move to python-crypto.scm.
* gnu/packages/python-crypto.scm (python-asn1crypto, python2-asn1crypto)
(python-pynacl, python2-pgpdump, python2-roca-detect): New variables.
 2017-11-16 08:45:15 +01:00
Ludovic Courtès
cc6f49121b
gnu: Move crypto packages from python to python-crypto. 
* gnu/packages/python.scm (python-passlib, python2-passlib)
(python-py-bcrypt, python2-py-bcrypt)
(python-paramiko, python2-paramiko, python-ecdsa, python2-ecdsa)
(python-pycrypto, python2-pycrypto, python-keyring, python2-keyring)
(python-certifi, python2-certifi)
(python-cryptography-vectors, python2-cryptography-vectors)
(python-cryptography, python2-cryptography)
(python-pyopenssl, python2-pyopenssl)
(python-axolotl-curve25519, python2-axolotl-curve25519)
(python-axolotl, python2-axolotl, python2-slowaes)
(python-pyaes, python2-pyaes): Move to...
* gnu/packages/python-crypto.scm: ... here.  New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/admin.scm, gnu/packages/backup.scm,
gnu/packages/crypto.scm, gnu/packages/finance.scm,
gnu/packages/irc.scm, gnu/packages/jrnl.scm,
gnu/packages/messaging.scm, gnu/packages/openstack.scm,
gnu/packages/python-web.scm, gnu/packages/tls.scm,
gnu/packages/xorg.scm: Adjust accordingly.
 2017-11-16 08:45:15 +01:00
Mark H Weaver
c114c9c5d8
gnu: linux-libre: Update to 4.14. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.14.
(%linux-libre-hash): Update hash.
* gnu/packages/aux-files/linux-libre/4.13-arm.conf,
gnu/packages/aux-files/linux-libre/4.13-i686.conf,
gnu/packages/aux-files/linux-libre/4.13-x86_64.conf: Delete files.
* gnu/packages/aux-files/linux-libre/4.14-arm.conf,
gnu/packages/aux-files/linux-libre/4.14-i686.conf,
gnu/packages/aux-files/linux-libre/4.14-x86_64.conf: New files.
* Makefile.am (AUX_FILES): Update accordingly.
 2017-11-16 00:03:34 -05:00
Mark H Weaver
811a24ca5f
gnu: linux-libre@4.9: Update to 4.9.62. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.62.
 2017-11-16 00:03:00 -05:00
Mark H Weaver
6f0e2c2b4a
gnu: linux-libre@4.4: Update to 4.4.98. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.98.
 2017-11-16 00:02:24 -05:00
Mark H Weaver
f1e3214534
gnu: icecat: Add more fixes from upstream mozilla-esr52. 
Add fixes for CVE-2017-7830, the remaining 1/2 changesets for CVE-2017-7828,
the remaining 1/19 changesets for CVE-2017-7826, and selected other fixes.

* gnu/packages/gnuzilla.scm (icecat)[source]: Add selected fixes from the
upstream mozilla-esr52 repository.
* gnu/packages/patches/icecat-bug-1348660-pt5.patch,
gnu/packages/patches/icecat-bug-1415133.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
 2017-11-16 00:01:46 -05:00
Mark H Weaver
6a71fa6faa
gnu: icecat: Label patches to reflect CVE assignments. 
Document that we include 18/19 changesets for CVE-2017-7826, and 1/2
changesets for CVE-2017-7828.

* gnu/packages/gnuzilla.scm (icecat)[source]: Rename patches to reflect CVE
assignments.
 2017-11-16 00:01:21 -05:00
Tobias Geerinckx-Rice
ed0f9f53ab
gnu: iproute2: Update to 4.14.1. 
* gnu/packages/linux.scm (iproute): Update to 4.14.1.
 2017-11-15 12:45:26 +01:00
Tobias Geerinckx-Rice
7c1adf0090
gnu: gnucash: Use HTTPS for www.gnucash.org. 
* gnu/packages/gnucash.scm (gnucash, gnucash-docs)[home-page]: Use HTTPS.
 2017-11-15 03:19:19 +01:00
Tobias Geerinckx-Rice
471ce31cd7
gnu: gnucash: Update to 2.6.18. 
* gnu/packages/gnucash.scm (gnucash): Update to 2.6.18.
 2017-11-15 03:19:18 +01:00
Tobias Geerinckx-Rice
c27f48573e
gnu: youtube-dl: Update to 2017.11.15. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.11.15.
 2017-11-15 03:19:18 +01:00
Tobias Geerinckx-Rice
99adfd7d3d
gnu: geoclue: Use HTTPS for home page. 
* gnu/packages/gnome.scm (geoclue)[home-page]: Use HTTPS.
 2017-11-15 03:19:18 +01:00
Tobias Geerinckx-Rice
dba7028f14
gnu: geoclue: Update to 2.4.7. 
* gnu/packages/gnome.scm (geoclue): Update to 2.4.7.
 2017-11-15 03:19:17 +01:00
Tobias Geerinckx-Rice
06d2a63c15
gnu: aria2: Update to 1.33.1. 
* gnu/packages/bittorrent.scm (aria2): Update 1.33.1.
 2017-11-15 03:19:17 +01:00
Tobias Geerinckx-Rice
c115b2dbe0
gnu: smartmontools: Mark up description. 
* gnu/packages/admin.scm (smartmontools)[description]: Use @dfn.
 2017-11-15 03:19:17 +01:00
Tobias Geerinckx-Rice
bd2eedd116
gnu: smartmontools: Update to 6.6. 
* gnu/packages/admin.scm (smartmontools): Update to 6.6.
 2017-11-15 03:19:16 +01:00
Kei Kebreau
8c2dcedd1d
gnu: devhelp: Update to 3.26.0. 
* gnu/packages/gnome.scm (devhelp): Update to 3.26.0.
 2017-11-14 17:50:33 -05:00
Kristofer Buffington
1697307185
gnu: Add guile-wiredtiger. 
* gnu/packages/databases.scm (guile-wiredtiger): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-11-14 23:46:53 +01:00
Oleg Pykhalov
5724a14e71
tests: install: Increase target-size. 
1200 MiB are too small for a btrfs-root-os, thus let increase it.

* gnu/tests/install.scm (run-install): Increase target-size to 2200 MiB.
(%btrfs-root-installation-script): Increase my-root partition size to 2G.
 2017-11-15 00:48:09 +03:00
David Thompson
52b617ffeb
gnu: Update awscli to 1.11.185. 
* gnu/packages/python-web.scm (awscli): Update to 1.11.185.
 2017-11-14 14:20:42 -05:00
Kei Kebreau
31d9e454ad
gnu: gnome-calculator: Update to 3.26.0. 
* gnu/packages/gnome.scm (gnome-calculator): Update to 3.26.0.
 2017-11-14 14:12:42 -05:00
Kei Kebreau
a5a22d7b14
gnu: gnome-system-monitor: Update to 3.26.0. 
* gnu/packages/gnome.scm (gnome-system-monitor): Update to 3.26.0.
 2017-11-14 13:47:03 -05:00
Tobias Geerinckx-Rice
85a9ffcbf4
gnu: exim: Use HTTPS for home page. 
* gnu/packages/mail.scm (exim)[home-page]: Use HTTPS.
 2017-11-14 04:06:53 +01:00
Tobias Geerinckx-Rice
58b8d1b39f
gnu: iproute2: Update to 4.14.0. 
* gnu/packages/linux.scm (iproute): Update to 4.14.0.
 2017-11-14 04:06:53 +01:00
Ludovic Courtès
1b2f753d9c
gnu: Move web packages from python to python-web. 
This is in part to address <https://bugs.gnu.org/27284>.

* gnu/packages/python.scm (python-httplib2, python2-httplib2)
(python-sockjs-tornado, python2-sockjs-tornado)
(python-flask-babel, python2-flask-babel)
(python-html5lib, python2-html5lib)
(python-html5lib-0.9, python2-html5lib-0.9)
(python-html5-parser, python2-html5-parser)
(python-webencodings, python2-webencodings)
(python-openid, python2-openid, python-cssutils, python2-cssutils)
(python-cssselect, python2-cssutils)
(python-openid-cla, python2-openid-cla)
(python-openid-teams, python2-openid-teams)
(python-tornado, python2-tornado)
(python-tornado-http-auth, python-terminado, python2-terminado)
(python-webob, python2-webob, python-zope-event, python2-zope-event)
(python-zope-interface, python2-zope-interface)
(python-zope-exceptions, python2-zope-exceptions)
(python-zope-testing, python2-zope-testing)
(python-zope-testrunner, python2-zope-testrunner)
(python-zope-i18nmessageid, python2-zope-i18nmessageid)
(python-zope-schema, python2-zope-schema)
(python-zope-configuration, python2-zope-configuration)
(python-zope-proxy, python2-zope-proxy)
(python-zope-location, python2-zope-location)
(python-zope-security, python2-zope-security)
(python-zope-component, python2-zope-component)
(python-ndg-httpsclient, python2-ndg-httpsclient)
(python-websocket-client, python2-websocket-client)
(python-requests-toolbelt, python2-requests-toolbelt)
(python-rauth, python2-rauth, python-urllib3, python2-urllib3)
(awscli, python-wsgiproxy2, python2-wsgiproxy2)
(python-pastedeploy, python2-pastedeploy)
(python-webtest, python2-webtest, python-flask, python2-flask)
(python-flast-wtf, python2-flask-wtf)
(python-flask-multistatic, python2-flask-multistatic)
(python-cookies, python2-cookies)
(python-responses, python2-responses)
(python-geventhttpclient, python2-geventhttpclient)
(python-requests-oauthlib, python2-requests-oauthlib)
(python-url, python2-url, python-cachecontrol, python2-cachecontrol)
(python-betamax, python2-betamax)
(python-betamax-matchers, python2-betamax-matchers)
(python-s3transfer, python2-s3transfer)
(python-flask-restful, python-flask-basicauth)
(python-flask-sqlalchemy, python-flask-restplus)
(python-flask-restful-swagger, python-htmlmin, python2-htmlmin)
(python-flask-htmlmin, python2-flask-htmlmin)
(python-flask-login, python2-flask-login)
(python-oauth2client, python-flask-oidc)
(python-webassets, python-cssmin, python2-cssmin)
(python-elasticsearch, python2-elasticsearch)
(python-flask-script, python2-flask-script)
(python-flask-migrate, python2-flask-migrate)
(python-genshi, python2-genshi)
(python-flask-principal, python2-flask-principal)
(python-flask-httpauth, python2-flask-httpauth)
(python-uritemplate, python2-uritemplate): Move to...
* gnu/packages/python-web.scm: ... here.  New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/admin.scm, gnu/packages/backup.scm,
gnu/packages/dav.scm, gnu/packages/django.scm,
gnu/packages/docker.scm, gnu/packages/ebook.scm,
gnu/packages/logging.scm, gnu/packages/mail.scm,
gnu/packages/music.scm, gnu/packages/openstack.scm,
gnu/packages/package-management.scm, gnu/packages/rdf.scm,
gnu/packages/tls.scm, gnu/packages/tor.scm,
gnu/packages/tryton.scm, gnu/packages/version-control.scm,
gnu/packages/web-browsers.scm,
gnu/packages/web.scm: Adjust accordingly.
 2017-11-13 23:41:01 +01:00
Ben Woodcroft
a68e586097
gnu: diamond: Update to 0.9.13. 
* gnu/packages/bioinformatics.scm (diamond): Update to 0.9.13.
 2017-11-14 08:25:43 +10:00
Ricardo Wurmus
5ccde2079e
gnu: Move test packages from perl to perl-check. 
* gnu/packages/perl.scm (perl-test2-bundle-extended,
perl-test2-plugin-nowarnings, perl-test-base, perl-test-class,
perl-test-class-most, perl-test-cleannamespaces, perl-test-command,
perl-test-cpan-meta, perl-test-cpan-meta-json, perl-test-deep,
perl-test-differences, perl-test-directory, perl-test-eol,
perl-test-exception, perl-test-fatal, perl-test-file-sharedir-dist,
perl-test-files, perl-test-harness, perl-test-leaktrace,
perl-test-longstring, perl-test-manifest, perl-test-memory-cycle,
perl-test-mockobject, perl-test-mocktime, perl-test-most, perl-test-needs,
perl-test-notabs, perl-test-nowarnings, perl-test-number-delta,
perl-test-output, perl-test-pod, perl-test-pod-coverage, perl-test-requires,
perl-test-script, perl-test-sharedfork, perl-test-simple, perl-test-taint,
perl-test-tester, perl-test-trap, perl-test-utf8, perl-test-warn,
perl-test-warnings, perl-test-without-module, perl-test-writevariants,
perl-test-yaml, perl-test-trailingspace): Move variables to ...
* gnu/packages/perl-check.scm: ... this new file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/admin.scm,
gnu/packages/bioinformatics.scm,
gnu/packages/crypto.scm,
gnu/packages/databases.scm,
gnu/packages/glib.scm,
gnu/packages/gnupg.scm,
gnu/packages/image-viewers.scm,
gnu/packages/language.scm,
gnu/packages/networking.scm,
gnu/packages/package-management.scm,
gnu/packages/perl.scm,
gnu/packages/terminals.scm,
gnu/packages/tex.scm,
gnu/packages/version-control.scm,
gnu/packages/web.scm,
gnu/packages/xml.scm,
gnu/packages/xorg.scm: Use perl-check module.
 2017-11-13 23:03:01 +01:00
Ricardo Wurmus
587d175266
gnu: ghc-tls: Move to (gnu packages tls). 
* gnu/packages/haskell.scm (ghc-tls): Move from here...
* gnu/packages/tls.scm (ghc-tls): ...to here.
* gnu/packages/haskell-web.scm: Use (gnu packages tls).
 2017-11-13 18:40:55 +01:00
Ricardo Wurmus
f24eba89f4
gnu: Move crypto packages from haskell to haskell-crypto. 
* gnu/packages/haskell.scm (ghc-asn1-types, ghc-asn1-encoding, ghc-asn1-parse,
ghc-crypto-api, ghc-crypto-api-tests, ghc-cryptohash, ghc-cryptohash-md5,
ghc-cryptohash-sha1, ghc-cryptonite, ghc-digest, ghc-entropy, ghc-pem,
ghc-puremd5, ghc-sha, ghc-x509, ghc-x509-store, ghc-x509-validation,
ghc-x509-system): Move variables to ...
* gnu/packages/haskell-crypto.scm: ... this new file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/haskell.scm,
gnu/packages/haskell-web.scm,
gnu/packages/version-control.scm: Include haskell-crypto module.
 2017-11-13 18:36:51 +01:00
Ricardo Wurmus
44b7374a22
gnu: Move web packages from haskell to haskell-web. 
* gnu/packages/haskell.scm (ghc-tagsoup, ghc-cookie, ghc-http-types, ghc-http,
ghc-http-client, ghc-http-client-tls, ghc-http-date, ghc-http2,
ghc-http-conduit, ghc-wai, ghc-wai-logger, ghc-wai-extra, ghc-wai-conduit,
ghc-warp, ghc-warp-tls, ghc-xss-sanitize, ghc-css-text, ghc-mime-types,
ghc-html, ghc-xhtml, ghc-blaze-html, ghc-aeson, ghc-aeson-pretty,
ghc-aeson-qq, ghc-multipart): Move variables to ...
* gnu/packages/haskell-web.scm: ... this new file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/haskell.scm,
gnu/packages/idris.scm,
gnu/packages/version-control.scm,
gnu/packages/wm.scm: Include haskell-web module.
 2017-11-13 18:12:37 +01:00
Ricardo Wurmus
a06b9b5007
gnu: Move testing packages from haskell to haskell-check. 
* gnu/packages/haskell.scm (ghc-clock-bootstrap, ghc-tasty-ant-xml,
ghc-tasty-smallcheck, ghc-tasty-quickcheck, ghc-tasty-golden, ghc-tasty,
ghc-tasty-hunit, ghc-tasty-kat, ghc-tasty-th, ghc-tasty-rerun,
ghc-quickcheck-instances, ghc-quickcheck-unicode, ghc-quickcheck-io,
ghc-quickcheck, ghc-test-framework, ghc-test-framework-hunit,
ghc-test-framework-quickcheck2, ghc-test-framework-th, ghc-hunit,
hspec-discover, ghc-hspec-core, ghc-hspec-meta, ghc-hspec, ghc-hspec-contrib,
ghc-hspec-expectations): Move variables to ...
* gnu/packages/haskell-check.scm: ... this new file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/haskell.scm,
gnu/packages/idris.scm,
gnu/packages/version-control.scm,
gnu/packages/wm.scm: Include haskell-check module.
 2017-11-13 18:12:27 +01:00
Ricardo Wurmus
d4735e8c65
gnu: cd-hit: Update source tarball hash. 
* gnu/packages/bioinformatics.scm (cd-hit)[source]: Update hash.
 2017-11-13 16:02:35 +01:00
Kei Kebreau
62f0806f4c
Revert "gnu: totem: Enable parallel build." 
This reverts commit e5f748a6c0.
 2017-11-13 07:47:23 -05:00
Ludovic Courtès
a0fea77dbb
services: guix: Remove dependency on 'lsof'. 
This is a followup to b8f59cdc20:
'list-runtime-roots' no longer depends on 'lsof'.

* gnu/services/base.scm (<guix-configuration>)[lsof]: Remove.
(guix-shepherd-service): Adjust accordingly.
* doc/guix.texi (Base Services): Adjust accordingly.
* gnu/system.scm (%base-packages): Remove LSOF.
 2017-11-13 11:36:28 +01:00
Ludovic Courtès
b918473189
gnu: guix: Update snapshot. 
* gnu/packages/package-management.scm (guix): Update to ff23b47.
 2017-11-13 11:31:27 +01:00
Efraim Flashner
6b7490b340
gnu: ibus: Update to 1.5.17. 
* gnu/packages/ibus.scm (ibus): Update to 1.5.17.
 2017-11-13 10:19:26 +02:00
Efraim Flashner
ce12b31157
gnu: ibus: Enable wayland support. 
* gnu/packages/ibus.scm (ibus)[arguments]: Add configure flag to enable
wayland support.
[inputs]: Add wayland.
 2017-11-13 10:19:26 +02:00
Kei Kebreau
f35bb0711c
gnu: libsoup: Update to 2.60.2. 
* gnu/packages/gnome.scm (libsoup): Update to 2.60.2.
 2017-11-12 21:20:24 -05:00
Leo Famulari
c0d1fa64d0
gnu: imagemagick: Update to 6.9.9-23. 
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.9-23.
 2017-11-12 17:50:01 -05:00
Leo Famulari
2560aa7adb
gnu: Remove unrar. 
This package is abandoned upstream and contains serious bugs:

http://seclists.org/oss-sec/2017/q3/329
https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2017-14120
https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2017-14121
https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2017-14122

* gnu/packages/compression.scm (unrar): Remove variable.
 2017-11-12 16:17:08 -05:00
Rutger Helling
8420c7a356
gnu: linux-libre: Change URL to HTTPS. 
* gnu/packages/linux.scm (linux-libre): Change URL to HTTPS.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-11-12 15:46:44 -05:00
Efraim Flashner
1650cf9284
gnu: mupdf: Unbundle mujs. 
* gnu/packages/pdf.scm (mupdf)[source]: Remove bundled mujs.
[inputs]: Add mujs.
 2017-11-12 19:39:21 +02:00
Efraim Flashner
89ba894eb3
gnu: Add mujs. 
* gnu/packages/javascript.scm (mujs): New variable.
 2017-11-12 19:39:20 +02:00
Efraim Flashner
76379dcace
gnu: mupdf: Use https. 
* gnu/packages/pdf.scm (mupdf)[source]: Use https.
[home-page]: Same.
 2017-11-12 19:39:20 +02:00
Efraim Flashner
31f248fa2c
gnu: pdf.scm: Arrange modules alphabetically. 
* gnu/packages/pdf.scm: Arrange modules alphabetically.
 2017-11-12 19:39:17 +02:00
Efraim Flashner
b07bfd06ee
gnu: lash: Don't build static libraries. 
* gnu/packages/audio.scm (lash)[arguments]: Add configure-flag to
disable static libraries.
 2017-11-12 12:04:49 +02:00
Efraim Flashner
44df780768
gnu: lash: Don't build lashd. 
This fixes bug#28174.

* gnu/packages/audio.scm (lash)[arguments]: Add phase to skip building lashd.
 2017-11-12 12:04:46 +02:00
Kei Kebreau
c7b433de47
gnu: glib-networking: Update to 2.54.1. 
* gnu/packages/gnome.scm (glib-networking): Update to 2.54.1.
 2017-11-12 01:17:10 -05:00
Efraim Flashner
1e2a36e1b0
gnu: ffmpeg: Reduce the size of the closure. 
* gnu/packages/video.scm (ffmpeg)[arguments]: Add new configure flags to
disable the html man pages and the static libraries.
 2017-11-12 07:11:29 +02:00
Efraim Flashner
7e0d513fb9
gnu: mupdf: Use Texinfo for the description. 
* gnu/packages/pdf.scm (mupdf)[description]: Use Texinfo to mark up the
description.
 2017-11-12 07:11:25 +02:00
Leo Famulari
b7ca42aa99
gnu: w3m: Find an editor in the environment. 
* gnu/packages/w3m.scm (w3m)[arguments]: Pass an empty value for --with-editor
in #:configure-flags.
[source]: Use git-file-name.
 2017-11-11 23:04:39 -05:00
Leo Famulari
882d921344
gnu: mupdf: Actually fix CVE-2017-15587. 
The original fix could be removed by an optimizing compiler.

* gnu/packages/patches/mupdf-CVE-2017-15587.patch: Revise patch.
 2017-11-11 22:34:24 -05:00
Tobias Geerinckx-Rice
07cc9245e6
gnu: libusb-compat: Use the same home page as libusb. 
* gnu/packages/libusb.scm (libusb-compat)[home-page]: Update.
 2017-11-12 03:25:49 +01:00
Tobias Geerinckx-Rice
5ade9bc769
gnu: fcgi: Fix typo in description. 
* gnu/packages/web.scm (fcgi)[description]: Fix typo.
 2017-11-12 03:25:48 +01:00
Tobias Geerinckx-Rice
d1b5043947
gnu: fcgi: Use archived home page fork. 
* gnu/packages/web.scm (fcgi)[home-page]: Use archived version.
 2017-11-12 03:25:48 +01:00
Tobias Geerinckx-Rice
9c2917f9e7
gnu: lynx: Use new home page. 
* gnu/packages/web-browsers.scm (lynx)[home-page]: Update.
 2017-11-12 03:25:47 +01:00
Tobias Geerinckx-Rice
6862e4bfe7
gnu: perl-mime-types: Update to 2.14. 
* gnu/packages/perl.scm (perl-mime-types): Update to 2.14.
 2017-11-12 03:25:47 +01:00
Ludovic Courtès
f9035ef213
gnu: mailutils: Update to 3.4. 
* gnu/packages/mail.scm (mailutils): Update to 3.4.
 2017-11-11 23:21:54 +01:00
Ludovic Courtès
cda2e2c719
gnu: emacs-emms: Update to 4.4. 
* gnu/packages/emacs.scm (emms): Update to 4.4.
 2017-11-11 23:21:54 +01:00
Jan Nieuwenhuizen
327df26fbf
gnu: nyacc: Update to 0.82.4. 
* gnu/packages/mes.scm (nyacc): Update to 0.82.4.
 2017-11-11 23:11:04 +01:00
Leo Famulari
4564782c3d
gnu: nvi: Build with support for Unicode text. 
* gnu/packages/nvi.scm (nvi)[arguments]: Pass '--enable-widechar'
to #:configure-flags.
 2017-11-11 12:00:37 -05:00
Marius Bakke
56f35d92f5
gnu: lvm2: Update to 2.02.176. 
* gnu/packages/linux.scm (lvm2): Update to 2.02.176.
 2017-11-11 07:40:55 +01:00
Marius Bakke
ec03062171
gnu: libstaroffice: Update to 0.0.5. 
* gnu/packages/libreoffice.scm (libstaroffice): Update to 0.0.5.
 2017-11-11 07:18:34 +01:00
Marius Bakke
45d5c80253
gnu: libvisio: Update to 0.1.6. 
* gnu/packages/libreoffice.scm (libvisio): Update to 0.1.6.
[source](patches): Remove.
* gnu/packages/patches/libvisio-fix-tests.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-11-11 07:15:39 +01:00
Marius Bakke
7a9283a619
gnu: libetonyek: Update to 0.1.7. 
* gnu/packages/libreoffice.scm (libetonyek): Update to 0.1.7.
[source](patches): Remove.
[arguments]<#:phases>: Remove.
[native-inputs]: Remove AUTOCONF and AUTOMAKE.
* gnu/packages/patches/libetonyek-build-with-mdds-1.2.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-11-11 07:13:01 +01:00
Rutger Helling
074ff555ab
gnu: libreoffice: Update to 5.3.7.2 and enable GTK3. 
* gnu/packages/libreoffice.scm (libreoffice): Update to 5.3.7.2
[source]: Change URL to HTTPS.
[inputs]: Add gtk+.
[configure-flags]: Remove "--disable-gtk3".

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-11-11 07:03:06 +01:00
Alex Vong
ce1ac8eea6
gnu: python2-rpython: Update to 0.2.1. 
* gnu/packages/python.scm (python2-rpython): Update to 0.2.1.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-11-11 07:00:22 +01:00
Alex Vong
e65acb3124
gnu: python-sympy: Update to 1.1.1. 
* gnu/packages/python.scm (python-sympy, python2-sympy): Update to 1.1.1.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-11-11 06:57:00 +01:00
Marius Bakke
e077e7da7f
gnu: python-sqlparse: Fix syntax error. 
This is a follow-up to commit 8d688cd27f.

* gnu/packages/python.scm (python-sqlparse)[arguments]: Add missing lambda.
 2017-11-11 06:40:50 +01:00
Tobias Geerinckx-Rice
8d688cd27f
gnu: python-sqlparse: Update to 0.2.4. 
* gnu/packages/python.scm (python-sqlparse, python2-sqlparse): Update to
0.2.4.
[arguments]: Don't invoke ‘2to3’.
 2017-11-11 05:17:59 +01:00
Tobias Geerinckx-Rice
795ec760e4
install: Fix typo. 
* gnu/system/install.scm (installation-os): Fix typo in comment.
 2017-11-11 05:17:59 +01:00
Tobias Geerinckx-Rice
9629c6b4b2
gnu: cyrus-sasl: Use new home page. 
* gnu/packages/cyrus-sasl.scm (cyrus-sasl)[home-page]: Update.
 2017-11-11 05:17:58 +01:00
Tobias Geerinckx-Rice
11ed4108fb
gnu: methylkit: Use new home page. 
* gnu/packages/bioinformatics.scm (methylkit)[home-page]: Update.
 2017-11-11 05:17:58 +01:00
Ben Woodcroft
7c087150ec
gnu: vsearch: Update to 2.6.0. 
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.6.0.
 2017-11-11 09:33:16 +10:00
Leo Famulari
74c0aeb027
gnu: webkitgtk: Update to 2.18.3 [fixes CVE-2017-{13788,13798,13803}]. 
* gnu/packages/webkit.scm (webkitgtk): Update to 2.18.3.
 2017-11-10 12:48:15 -05:00
Leo Famulari
adf7e69cab
gnu: qemu: Fix CVE-2017-{15038,15268,15289}. 
* gnu/packages/patches/qemu-CVE-2017-15038.patch,
gnu/packages/patches/qemu-CVE-2017-15268.patch,
gnu/packages/patches/qemu-CVE-2017-15289.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/virtualization.scm (qemu)[source]: Use them.
 2017-11-10 12:16:31 -05:00
Kei Kebreau
d4d7d70912
gnu: Fix hunspell-dict-en-* dictionary installation. 
* gnu/packages/aspell.scm (aspell-word-list)[arguments]: Install the .dic file
for all hunspell dictionaries.
 2017-11-10 11:59:09 -05:00
Ricardo Wurmus
0af4df7e61
gnu: cutadapt: Update to 1.14. 
* gnu/packages/bioinformatics.scm (cutadapt): Update to 1.14.
 2017-11-10 15:32:42 +01:00
Ricardo Wurmus
ae451b9dc2
gnu: synergy: Fix minor problems with the package definitions. 
* gnu/packages/synergy.scm (synergy)[source]: Return #t in the snippet.
[arguments]: Let build phases return #t; fix typo in comment.
[home-page]: Change to redirection target.
[description]: Fix typo.
 2017-11-10 15:19:06 +01:00
Jelle Licht
177475cfb5
gnu: password-store: Install passmenu script. 
* gnu/packages/password-utils (password-store)
  [inputs]: Add dmenu and xdotool.
  [arguments]<#:phases>['patch-passmenu-path']: New phase.
  [arguments]<#:phases>['install-passmenu']: New phase.
 2017-11-10 14:22:28 +01:00
Diego Nicola Barbato
011f57695a
gnu: Add Epson escpr printer driver. 
* gnu/packages/cups.scm (escpr): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-11-10 13:07:54 +01:00
Efraim Flashner
179b7ac66d
gnu: postgresql@9.6: Update to 9.6.6 [security fixes]. 
This fixes CVE-2017-12172, CVE-2017-15098, CVE-2017-15099.

* gnu/packages/databases.scm (postgresql@9.6): Update to 9.6.6.
 2017-11-10 10:24:13 +02:00
Mark H Weaver
74bea6a036
gnu: linux-libre: Update to 4.13.12. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.13.12.
(%linux-libre-hash): Update hash.
 2017-11-09 21:11:00 -05:00
Mark H Weaver
4cacbf33a6
gnu: linux-libre@4.9: Update to 4.9.61. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.61.
 2017-11-09 21:10:14 -05:00
Mark H Weaver
3a79bd03ff
gnu: linux-libre@4.4: Update to 4.4.97. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.97.
 2017-11-09 21:09:34 -05:00
Mark H Weaver
f8071bea91
gnu: linux-libre@4.1: Update to 4.1.46. 
* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.46.
 2017-11-09 21:08:51 -05:00
Tobias Geerinckx-Rice
3c3d20c8f3
gnu: libpsl: Update to 0.19.1. 
* gnu/packages/web.scm (libpsl): Update to 0.19.1.
 2017-11-10 02:37:15 +01:00
Rutger Helling
1d8e73ba67
gnu: postgresql: Update to 10.1 [security fixes]. 
Fixes CVE-2017-12172, CVE-2017-15098 and CVE-2017-15099.

* gnu/packages/databases.scm (postgresql): Update to 10.1.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-11-10 01:22:53 +01:00
Kyle Meyer
e99f045cc8
gnu: Add r-directlabels. 
* gnu/packages/statistics.scm (r-directlabels): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-11-09 23:54:48 +01:00
Alex Vong
d3150731a8
gnu: emacs-ahungry-theme: Update to 1.8.0. 
* gnu/packages/emacs.scm (emacs-ahungry-theme): Update to 1.8.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-11-09 23:54:48 +01:00
Marek Benc
f021382be4
gnu: Add nxbelld. 
* gnu/packages/xdisorg.scm (nxbelld): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-11-09 23:54:48 +01:00
Efraim Flashner
d8f075c3a3
gnu: %intel-compatible-systems: Re-add variable. 
This is a follow-up to cfbe7b7f4c.

* gnu/packages/linux.scm (%intel-compatible-systems): New variable.
 2017-11-09 22:25:48 +02:00
Mathieu Othacehe
cfbe7b7f4c
gnu: linux: Add linux-libre arm kernel. 
* Makefile.am (AUX_FILES): Add arm config file.
* gnu/packages/aux-files/linux-libre/4.13-arm.conf: New file.
* gnu/packages/linux.scm (%intel-compatible-systems): Rename to
  %linux-compatible-systems and add "armhf-linux".
  (linux-libre): Adapt consequently.

The config file for arm is taken from debian armmp kernel. It's a generic
firmware for ARMv7 multiplatform compatible SoCs.
 2017-11-09 20:35:11 +01:00
Leo Famulari
3694a9b33b
gnu: chromaprint: Update to 1.4.2. 
* gnu/packages/mp3.scm (chromaprint): Update to 1.4.2.
 2017-11-09 13:23:39 -05:00
Kei Kebreau
ad9b8987f3
gnu: libwnck: Update to 3.24.1. 
* gnu/packages/gnome.scm (libwnck): Update to 3.24.1.
 2017-11-09 12:17:37 -05:00
Ludovic Courtès
5475749960
system: Do not set 'TZ'. 
Fixes <https://bugs.gnu.org/29212>.
Reported by Diego Nicola Barbato <dnbarbato@posteo.de>.

* gnu/system.scm (operating-system-environment-variables): Remove "TZ".
 2017-11-09 09:59:21 +01:00
Ben Woodcroft
da4a707c88
gnu: roary: Update to 3.11.0. 
* gnu/packages/bioinformatics.scm (roary): Update to 3.11.0.
[inputs]: Add perl-digest-md5-file.
 2017-11-09 18:12:32 +10:00
Kei Kebreau
e5f748a6c0
gnu: totem: Enable parallel build. 
* gnu/packages/gnome.scm (totem)[arguments]: Set #:parallel-build? to #t
implicitly.
 2017-11-08 20:43:40 -05:00
Leo Famulari
8f220b7b41
gnu: tremc: Update to 0.9.0-1.9755b50. 
* gnu/packages/bittorrent.scm (tremc): Update to 0.9.0-1.9755b50.
[version]: Use git-version.
[source]: Use git-file-name.
 2017-11-08 19:32:32 -05:00
Leo Famulari
ea1f073d73
gnu: slurm: Update to 16.05.11 [fixes CVE-2017-15566]. 
* gnu/packages/parallel.scm (slurm): Update to 16.05.11.
[source]: Use the recommended download URL.
 2017-11-08 19:32:31 -05:00
Leo Famulari
a3dd13ae0e
gnu: rpm: Update to 4.13.0.2 [fixes CVE-2017-{7500,7501}]. 
* gnu/packages/package-management.scm (rpm): Update to 4.13.0.2.
 2017-11-08 19:00:07 -05:00
Leo Famulari
7df4194b16
gnu: python-icalendar: Update to 4.0.0. 
* gnu/packages/python.scm (python-icalendar): Update to 4.0.0.
 2017-11-08 18:36:29 -05:00
Leo Famulari
03b154f800
gnu: syncthing: Update to 0.14.40. 
* gnu/packages/syncthing.scm (syncthing): Update to 0.14.40.
[inputs]: Add go-github-com-zillode-notify.
 2017-11-08 17:24:02 -05:00
Leo Famulari
52ff28e4aa
gnu: Add go-github-com-zillode-notify. 
* gnu/packages/syncthing.scm (go-github-com-zillode-notify): New variable.
 2017-11-08 17:24:01 -05:00
Leo Famulari
4cf6827de3
gnu: go-github-com-audriusbutkevicius-kcp-go: Update to 0.0.0-1.8ae5f52. 
* gnu/packages/syncthing.scm (go-github-com-audriusbutkevicius-kcp-go):
Update to 0.0.0-1.8ae5f52.
[propagated-inputs]: Add go-github-com-tjfoc-gmsm-sm4.
 2017-11-08 17:24:01 -05:00
Leo Famulari
f44169c2a7
gnu: Add go-github-com-tjfoc-gmsm-sm4. 
* gnu/packages/syncthing.scm (go-github-com-tjfoc-gmsm-sm4): New variable.
 2017-11-08 17:24:01 -05:00
Ludovic Courtès
49483f7138
services: Add 'lookup-service-types'. 
* gnu/services.scm (lookup-service-types): New procedure.
* tests/services.scm ("lookup-service-types"): New test.
 2017-11-08 22:31:58 +01:00
Ludovic Courtès
3943913fac
services: 'fold-service-types' includes (gnu services). 
* gnu/services.scm (all-service-modules): New procedure.
(fold-service-types): Use it for the default MODULES value.
 2017-11-08 22:31:58 +01:00
Ludovic Courtès
a3d37f3ae5
services: 'fold-service-types' honors its seed. 
* gnu/services.scm (fold-service-types): Use SEED instead of '().
 2017-11-08 22:31:58 +01:00
Hartmut Goebel
0af94ad52f
gnu: service: Update comment. 
* gnu/services/base.scm (guix-activation): Update comment.
 2017-11-08 18:23:06 +01:00
Hartmut Goebel
d9565f7d87
install: Use overlayfs instead of unionfs. 
I dediced to keep adding /tmp as tmpfs since I was not able to trigger bug
while still using unionfs, so I could not verify whether this mount is still
needed with overlayfs.  Mapping /tmp to tmpfs does not harm, so we are on the
save side.

* gnu/system/install.scm (make-cow-store): Mount /gnu/store without additional
  read-only bind-mount, since in overlayfs the "lower" level is always
  read-only. Add work-dir required by overlayfs. No need to sleep anymore
  since now using the mount syscall. [unionfs]: Remove now unused function.
  (%installation-services): Update comment.
  (installation-os)[file-systems]: Update comment.
 2017-11-08 18:23:06 +01:00
Hartmut Goebel
c828969036
build: Use overlayfs instead of unionfs. 
Overlayfs is part of the kernel, while unionfs needs FUSE.  This also reduces
the size of the initrd by ca. 4.3% (487K).

* gnu/build/linux-boot.scm (mount-root-file-system): Remove optional parameter
  "unionfs"; mount using overlayfs instead of unionfs; new directory layout
  requied by overlayfs; update documentation.
  [mark-as-not-killable]: Remove now unused function

* gnu/system/linux-initrd.scm (file-system-packages): Remove now unused
  packages "unionfs-fuse/static" and thus unused related 'if'.
  (linux-modules): Replace "fuse" by "overlay".
 2017-11-08 18:23:05 +01:00
Ricardo Wurmus
34260a10d7
gnu: miso: Use pypi-uri. 
* gnu/packages/bioinformatics.scm (miso)[source]: Use pypi-uri.
 2017-11-08 17:41:08 +01:00
Ricardo Wurmus
e5c17b8d9d
gnu: Add r-vcd. 
* gnu/packages/cran.scm (r-vcd): New variable.
 2017-11-08 17:34:35 +01:00
Ricardo Wurmus
018cf270a3
gnu: Add r-laeken. 
* gnu/packages/cran.scm (r-laeken): New variable.
 2017-11-08 17:34:11 +01:00
Ricardo Wurmus
697e341e74
gnu: fastcap: Use texlive-tiny. 
* gnu/packages/engineering.scm (fastcap)[native-inputs]: Replace texlive with
texlive-tiny.
[arguments]: Fix indentation; set HOME in "make-pdf" phase to avoid font
errors with texlive-tiny.
 2017-11-08 17:15:24 +01:00
Ricardo Wurmus
7e3aca2b78
gnu: librecad: Fix build. 
* gnu/packages/engineering.scm (librecad)[arguments]: Add phase
"patch-boost-error".
 2017-11-08 16:21:54 +01:00
Ricardo Wurmus
b72b42cf02
gnu: Add r-performanceanalytics. 
* gnu/packages/cran.scm (r-performanceanalytics): New variable.
 2017-11-08 16:21:54 +01:00
Ricardo Wurmus
3699383e6f
gnu: Add r-xts. 
* gnu/packages/cran.scm (r-xts): New variable.
 2017-11-08 16:21:53 +01:00
Ricardo Wurmus
5a80c15c14
gnu: Remove "open source" from descriptions. 
All software in Guix is Free Software.

* gnu/packages/aidc.scm (libdmtx)[description]: Remove "open source" string.
* gnu/packages/firmware.scm (seabios)[description]: Likewise.
* gnu/packages/libupnp.scm (libupnp)[description]: Likewise.
* gnu/packages/maths.scm (cubicle)[description]: Likewise.
* gnu/packages/mingw.scm (mingw-w64)[description]: Likewise.
* gnu/packages/game-development.scm (openmw)[description]: Likewise.
[synopsis]: Remove "Free software".
 2017-11-08 16:21:53 +01:00
Ricardo Wurmus
88fb156288
gnu: pcb: Update to 4.0.2. 
* gnu/packages/engineering.scm (pcb): Update to 4.0.2.
[arguments]: Add build phase "fix-check-for-display".
 2017-11-08 16:21:53 +01:00
Efraim Flashner
c8b38f8ea6
gnu: time: Update license. 
* gnu/packages/time.scm (time)[license]: Change to gpl3+.
 2017-11-08 10:52:09 +02:00
Efraim Flashner
dd00e0919f
gnu: time: Update to 1.8. 
* gnu/packages/time.scm (time): Update to 1.8.
[arguments]: Remove custom 'configure phase.
 2017-11-08 10:49:19 +02:00
Ricardo Wurmus
12a24ee878
gnu: Add glusterfs. 
* gnu/packages/file-systems.scm (glusterfs): New variable.
 2017-11-07 23:32:46 +01:00
Ricardo Wurmus
2e648d2bc4
gnu: r-prabclus: Update description. 
* gnu/packages/statistics.scm (r-prabclus)[description]: Fix grammar errors.
 2017-11-07 23:32:46 +01:00
Ricardo Wurmus
14e5f6b20a
gnu: r-fdrtool: Update description. 
* gnu/packages/statistics.scm (r-fdrtool)[description]: Use "@dfn" syntax.
 2017-11-07 23:32:46 +01:00
Ricardo Wurmus
738dda8330
gnu: Add r-bbmle. 
* gnu/packages/cran.scm (r-bbmle): New variable.
 2017-11-07 23:32:46 +01:00
Ricardo Wurmus
7b0569c0a9
gnu: Add r-rsofia. 
* gnu/packages/cran.scm (r-rsofia): New variable.
 2017-11-07 23:32:46 +01:00
Ricardo Wurmus
c49102ecca
gnu: Add r-hitc. 
* gnu/packages/bioinformatics.scm (r-hitc): New variable.
 2017-11-07 23:32:45 +01:00
Ricardo Wurmus
30eb4e37c8
gnu: Add r-fithic. 
* gnu/packages/bioinformatics.scm (r-fithic): New variable.
 2017-11-07 23:32:45 +01:00
Ricardo Wurmus
fbf5440637
gnu: Add r-sushi. 
* gnu/packages/bioinformatics.scm (r-sushi): New variable.
 2017-11-07 23:32:45 +01:00
Ricardo Wurmus
9232cac410
gnu: Add r-vioplot. 
* gnu/packages/cran.scm (r-vioplot): New variable.
 2017-11-07 23:32:45 +01:00
Ricardo Wurmus
3a22732cd8
gnu: Add r-sm. 
* gnu/packages/cran.scm (r-sm): New variable.
 2017-11-07 23:32:45 +01:00
Ricardo Wurmus
2e4ce60e7c
gnu: Add r-gwascat. 
* gnu/packages/bioinformatics.scm (r-gwascat): New variable.
 2017-11-07 23:32:44 +01:00
Ricardo Wurmus
4272000661
gnu: Add r-gviz. 
* gnu/packages/bioinformatics.scm (r-gviz): New variable.
 2017-11-07 23:32:44 +01:00
Ricardo Wurmus
794ff347a9
gnu: Add r-gqtlstats. 
* gnu/packages/bioinformatics.scm (r-gqtlstats): New variable.
 2017-11-07 23:32:44 +01:00
Ricardo Wurmus
7fd5f60b8f
gnu: Add r-hardyweinberg. 
* gnu/packages/cran.scm (r-hardyweinberg): New variable.
 2017-11-07 23:32:44 +01:00
Ricardo Wurmus
10e16fa93d
gnu: Add r-mice. 
* gnu/packages/cran.scm (r-mice): New variable.
 2017-11-07 23:32:44 +01:00
Ricardo Wurmus
66c39102e5
gnu: Add r-ldblock. 
* gnu/packages/bioinformatics.scm (r-ldblock): New variable.
 2017-11-07 23:32:44 +01:00
Ricardo Wurmus
15f98b0d23
gnu: Add r-erma. 
* gnu/packages/bioinformatics.scm (r-erma): New variable.
 2017-11-07 23:32:43 +01:00
Ricardo Wurmus
421c68e3f7
gnu: Add r-homo-sapiens. 
* gnu/packages/bioinformatics.scm (r-homo-sapiens): New variable.
 2017-11-07 23:32:43 +01:00
Ricardo Wurmus
b52a866d14
gnu: Add r-org-hs-eg-db. 
* gnu/packages/bioinformatics.scm (r-org-hs-eg-db): New variable.
 2017-11-07 23:32:43 +01:00
Ricardo Wurmus
dd5fc8b78e
gnu: Add r-snpstats. 
* gnu/packages/bioinformatics.scm (r-snpstats): New variable.
 2017-11-07 23:32:43 +01:00
Ricardo Wurmus
e2b927993e
gnu: Add r-gqtlbase. 
* gnu/packages/bioinformatics.scm (r-gqtlbase): New variable.
 2017-11-07 23:32:43 +01:00
Ricardo Wurmus
96a392a0b2
gnu: Add r-gprofiler. 
* gnu/packages/bioinformatics.scm (r-gprofiler): New variable.
 2017-11-07 23:32:42 +01:00
Ricardo Wurmus
60faf94597
gnu: Add r-ggbio. 
* gnu/packages/bioinformatics.scm (r-ggbio): New variable.
 2017-11-07 23:32:42 +01:00