Commit graph

2548 commits

Author SHA1 Message Date
Ricardo Wurmus
3159fcf145
gnu: r-wgcna: Move to (gnu packages bioconductor).
This is a follow-up to commit 6e0ab26f31.

* gnu/packages/cran.scm (r-wgcna): Move from here...
* gnu/packages/bioconductor.scm (r-wgcna): ...to here.
2020-09-14 21:40:15 +02:00
zimoun
f4d920b9f7
gnu: r-fourcseq: Move to (gnu packages bioconductor).
* gnu/packages/cran.scm (r-fourcseq): Move from here...
* gnu/packages/bioconductor.scm (r-fourcseq): ...to here.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-14 21:39:00 +02:00
Ricardo Wurmus
1c1b941902
gnu: r-diversitree: Update to 0.9-14.
* gnu/packages/cran.scm (r-diversitree): Update to 0.9-14.
2020-09-14 19:07:47 +02:00
Ricardo Wurmus
8731d274ae
gnu: r-seurat: Update to 3.2.1.
* gnu/packages/cran.scm (r-seurat): Update to 3.2.1.
[propagated-inputs]: Remove r-ape; add r-matrixstats.
2020-09-14 19:07:47 +02:00
Ricardo Wurmus
e6711231ed
gnu: r-rfast: Update to 2.0.1.
* gnu/packages/cran.scm (r-rfast): Update to 2.0.1.
2020-09-14 19:07:47 +02:00
Ricardo Wurmus
0982ffa898
gnu: r-scatterpie: Update to 0.1.5.
* gnu/packages/cran.scm (r-scatterpie): Update to 0.1.5.
2020-09-14 19:07:47 +02:00
Ricardo Wurmus
df2210be8b
gnu: r-forecast: Update to 8.13.
* gnu/packages/cran.scm (r-forecast): Update to 8.13.
2020-09-14 19:07:47 +02:00
Ricardo Wurmus
ad10a45225
gnu: r-gamlss: Update to 5.2-0.
* gnu/packages/cran.scm (r-gamlss): Update to 5.2-0.
2020-09-14 19:07:47 +02:00
Ricardo Wurmus
bf37420fe7
gnu: r-parameters: Update to 0.8.5.
* gnu/packages/cran.scm (r-parameters): Update to 0.8.5.
2020-09-14 19:07:47 +02:00
Ricardo Wurmus
515b746945
gnu: r-systemfonts: Update to 0.3.1.
* gnu/packages/cran.scm (r-systemfonts): Update to 0.3.1.
2020-09-14 19:07:46 +02:00
Ricardo Wurmus
3f67fb11cf
gnu: r-dalex: Update to 2.0.
* gnu/packages/cran.scm (r-dalex): Update to 2.0.
2020-09-14 19:07:46 +02:00
Ricardo Wurmus
ef59d57841
gnu: r-sf: Update to 0.9-6.
* gnu/packages/cran.scm (r-sf): Update to 0.9-6.
2020-09-14 19:07:46 +02:00
Ricardo Wurmus
b426f79602
gnu: r-deldir: Update to 0.1-29.
* gnu/packages/cran.scm (r-deldir): Update to 0.1-29.
2020-09-14 19:07:46 +02:00
Ricardo Wurmus
0435f7eec1
gnu: r-shinyjs: Update to 2.0.0.
* gnu/packages/cran.scm (r-shinyjs): Update to 2.0.0.
[native-inputs]: Add r-knitr.
2020-09-14 19:07:46 +02:00
Ricardo Wurmus
11f448ba74
gnu: r-etm: Update to 1.1.1.
* gnu/packages/cran.scm (r-etm): Update to 1.1.1.
2020-09-14 19:07:46 +02:00
Ricardo Wurmus
ffe714b5f4
gnu: r-fields: Update to 11.4.
* gnu/packages/cran.scm (r-fields): Update to 11.4.
2020-09-14 19:07:46 +02:00
Ricardo Wurmus
0f93324a83
gnu: r-rnifti: Update to 1.2.2.
* gnu/packages/cran.scm (r-rnifti): Update to 1.2.2.
2020-09-14 19:07:46 +02:00
Ricardo Wurmus
0b73771ad9
gnu: r-misc3d: Update to 0.9-0.
* gnu/packages/cran.scm (r-misc3d): Update to 0.9-0.
2020-09-14 19:07:46 +02:00
Ricardo Wurmus
015e15c836
gnu: r-rcpphnsw: Update to 0.3.0.
* gnu/packages/cran.scm (r-rcpphnsw): Update to 0.3.0.
2020-09-14 19:07:46 +02:00
Ricardo Wurmus
a1e92714ce
gnu: r-ggeffects: Update to 0.16.0.
* gnu/packages/cran.scm (r-ggeffects): Update to 0.16.0.
2020-09-14 19:07:46 +02:00
Ricardo Wurmus
7975d2c3b8
gnu: r-performance: Update to 0.5.0.
* gnu/packages/cran.scm (r-performance): Update to 0.5.0.
2020-09-14 19:07:46 +02:00
Ricardo Wurmus
5efeef3f01
gnu: r-mosaicdata: Update to 0.20.1.
* gnu/packages/cran.scm (r-mosaicdata): Update to 0.20.1.
2020-09-14 19:07:46 +02:00
Ricardo Wurmus
9e3712958f
gnu: r-mosaiccore: Update to 0.8.0.
* gnu/packages/cran.scm (r-mosaiccore): Update to 0.8.0.
[propagated-inputs]: Remove r-lazyeval.
2020-09-14 19:07:46 +02:00
Ricardo Wurmus
6880269b94
gnu: r-flextable: Update to 0.5.11.
* gnu/packages/cran.scm (r-flextable): Update to 0.5.11.
2020-09-14 19:07:45 +02:00
Ricardo Wurmus
07c1620f81
gnu: r-insight: Update to 0.9.5.
* gnu/packages/cran.scm (r-insight): Update to 0.9.5.
2020-09-14 19:07:45 +02:00
Ricardo Wurmus
9a22da3790
gnu: r-officer: Update to 0.3.14.
* gnu/packages/cran.scm (r-officer): Update to 0.3.14.
2020-09-14 19:07:45 +02:00
Ricardo Wurmus
16cc10eafb
gnu: r-extradistr: Update to 1.9.1.
* gnu/packages/cran.scm (r-extradistr): Update to 1.9.1.
2020-09-14 19:07:45 +02:00
Ricardo Wurmus
8d8db33f71
gnu: r-tsa: Update to 1.3.
* gnu/packages/cran.scm (r-tsa): Update to 1.3.
[propagated-inputs]: Add r-tseries.
2020-09-14 19:07:45 +02:00
Ricardo Wurmus
60e4d97295
gnu: r-xfun: Update to 0.17.
* gnu/packages/cran.scm (r-xfun): Update to 0.17.
2020-09-14 19:07:45 +02:00
Ricardo Wurmus
cb4243eaba
gnu: r-processx: Update to 3.4.4.
* gnu/packages/cran.scm (r-processx): Update to 3.4.4.
2020-09-14 19:07:45 +02:00
Ricardo Wurmus
302dacec7e
gnu: r-xts: Update to 0.12.1.
* gnu/packages/cran.scm (r-xts): Update to 0.12.1.
2020-09-14 19:07:45 +02:00
Ricardo Wurmus
dee6078a86
gnu: r-psych: Update to 2.0.8.
* gnu/packages/cran.scm (r-psych): Update to 2.0.8.
2020-09-14 19:07:45 +02:00
Ricardo Wurmus
c5199f2918
gnu: r-inline: Update to 0.3.16.
* gnu/packages/cran.scm (r-inline): Update to 0.3.16.
2020-09-14 19:07:45 +02:00
Ricardo Wurmus
5473d23f59
gnu: r-lmtest: Update to 0.9-38.
* gnu/packages/cran.scm (r-lmtest): Update to 0.9-38.
2020-09-14 19:07:45 +02:00
Ricardo Wurmus
54c91e4a66
gnu: r-shape: Update to 1.4.5.
* gnu/packages/cran.scm (r-shape): Update to 1.4.5.
2020-09-14 19:07:45 +02:00
Ricardo Wurmus
8c7a185779
gnu: r-jsonlite: Update to 1.7.1.
* gnu/packages/cran.scm (r-jsonlite): Update to 1.7.1.
2020-09-14 19:07:45 +02:00
Ricardo Wurmus
adde909369
gnu: r-callr: Update to 3.4.4.
* gnu/packages/cran.scm (r-callr): Update to 3.4.4.
2020-09-14 19:07:44 +02:00
Ricardo Wurmus
c629dce1df
gnu: r-ggpmisc: Update to 0.3.6.
* gnu/packages/cran.scm (r-ggpmisc): Update to 0.3.6.
[propagated-inputs]: Add r-glue.
2020-09-14 19:07:44 +02:00
Ricardo Wurmus
8458490bc2
gnu: r-adaptivesparsity: End build phase on #T.
* gnu/packages/cran.scm (r-adaptivesparsity)[arguments]: End phase
"link-against-armadillo" with Boolean.
2020-09-11 22:04:41 +02:00
Ricardo Wurmus
fd498532ab
gnu: r-adaptivesparsity: Fix case of "Gaussian".
* gnu/packages/cran.scm (r-adaptivesparsity)[description]: Fix typo.
2020-09-11 22:04:12 +02:00
Ricardo Wurmus
dbef55b7aa
gnu: r-qtl: Use CRAN-URI.
* gnu/packages/cran.scm (r-qtl)[source]: Use CRAN-URI instead of explicit
mirror URL.
2020-09-11 22:02:22 +02:00
Ricardo Wurmus
1e8bfc4cf9
gnu: r-qtl: Correct indentation.
* gnu/packages/cran.scm (r-qtl): Reindent.
[description]: Reflow paragraphs.
2020-09-11 22:00:30 +02:00
zimoun
d4e2ec1b8a
gnu: r-absfiltergsea: Move to (gnu packages cran).
* gnu/packages/bioinformatics.scm (r-absfiltergsea): Move from here...
* gnu/packages/cran.scm (r-absfiltergsea): ...to here.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:59:23 +02:00
zimoun
77c7394086
gnu: r-diversitree: Move to (gnu packages cran).
* gnu/packages/bioinformatics.scm (r-diversitree): Move from here...
* gnu/packages/cran.scm (r-diversitree): ...to here.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:59:23 +02:00
zimoun
415aa8a583
gnu: r-phangorn: Move to (gnu packages cran).
* gnu/packages/bioinformatics.scm (r-phangorn): Move from here...
* gnu/packages/cran.scm (r-phangorn): ...to here.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:59:21 +02:00
zimoun
f9c0b2e05a
gnu: r-seurat: Move to (gnu packages cran).
* gnu/packages/bioinformatics.scm (r-seurat): Move from here...
* gnu/packages/cran.scm (r-seurat): ...to here.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:59:17 +02:00
zimoun
b31c364467
gnu: r-maldiquant: Move to (gnu packages cran).
* gnu/packages/bioinformatics.scm (r-maldiquant): Move from here...
* gnu/packages/cran.scm (r-maldiquant): ...to here.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:59:12 +02:00
zimoun
30aaee3306
gnu: r-seqminer: Move to (gnu packages cran).
* gnu/packages/bioinformatics.scm (r-seqminer): Move from here...
* gnu/packages/cran.scm (r-seqminer): ...to here.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:59:07 +02:00
zimoun
66a8e62070
gnu: r-qtl2: Move to (gnu packages cran).
* gnu/packages/bioinformatics.scm (r-qtl2): Move from here...
* gnu/packages/cran.scm (r-qtl2): ...to here.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:59:03 +02:00
zimoun
496a52dc41
gnu: r-qtl: Move to (gnu packages cran).
* gnu/packages/bioinformatics.scm (r-qtl): Move from here...
* gnu/packages/cran.scm (r-qtl): ...to here.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-11 21:58:58 +02:00