Commit graph

414 commits

Author SHA1 Message Date
Ricardo Wurmus
6aca4054e0
gnu: r-fdb-infiniummethylation-hg19: Use bioconductor-uri.
* gnu/packages/bioconductor.scm (r-fdb-infiniummethylation-hg19)[source]: Use
bioconductor-uri.
2019-12-04 09:34:47 +01:00
Ricardo Wurmus
c271d99025
gnu: r-txdb-mmusculus-ucsc-mm10-knowngene: Use bioconductor-uri.
* gnu/packages/bioconductor.scm (r-txdb-mmusculus-ucsc-mm10-knowngene)[source]:
Use bioconductor-uri.
[arguments]: Enable substitution.
2019-12-04 09:34:13 +01:00
Ricardo Wurmus
1afdf41b49
gnu: r-txdb-mmusculus-ucsc-mm9-knowngene: Use bioconductor-uri.
* gnu/packages/bioconductor.scm (r-txdb-mmusculus-ucsc-mm9-knowngene)[source]:
Use bioconductor-uri.
2019-12-04 09:33:54 +01:00
Ricardo Wurmus
d78db08862
gnu: r-txdb-hsapiens-ucsc-hg38-knowngene: Use bioconductor-uri.
* gnu/packages/bioconductor.scm (r-txdb-hsapiens-ucsc-hg38-knowngene)[source]:
Use bioconductor-uri.
2019-12-04 09:33:35 +01:00
Ricardo Wurmus
f2580a1385
gnu: r-txdb-hsapiens-ucsc-hg19-knowngene: Use bioconductor-uri.
* gnu/packages/bioconductor.scm (r-txdb-hsapiens-ucsc-hg19-knowngene)[source]:
Use bioconductor-uri.
[arguments]: Enable substitution.
2019-12-04 09:33:09 +01:00
Ricardo Wurmus
717d7cda9d
gnu: r-genelendatabase: Use bioconductor-uri.
* gnu/packages/bioconductor.scm (r-genelendatabase)[source]: Use
bioconductor-uri.
2019-12-04 09:32:48 +01:00
Ricardo Wurmus
e7a8cf2e6e
gnu: r-bsgenome-hsapiens-ucsc-hg19: Use bioconductor-uri.
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ucsc-hg19)[source]:
Use bioconductor-uri.
[arguments]: Enable substitution.
2019-12-04 09:32:22 +01:00
Ricardo Wurmus
411be88bf3
gnu: r-org-mm-eg-db: Use bioconductor-uri.
* gnu/packages/bioconductor.scm (r-org-mm-eg-db)[source]: Use
bioconductor-uri.
2019-12-04 09:32:03 +01:00
Ricardo Wurmus
f53becc6d8
gnu: r-org-hs-eg-db: Use bioconductor-uri.
* gnu/packages/bioconductor.scm (r-org-hs-eg-db)[source]: Use
bioconductor-uri.
2019-12-04 09:31:46 +01:00
Ricardo Wurmus
7bb65a2227
gnu: r-org-dr-eg-db: Use bioconductor-uri.
* gnu/packages/bioconductor.scm (r-org-dr-eg-db)[source]: Use
bioconductor-uri.
2019-12-04 09:31:19 +01:00
Ricardo Wurmus
b0dfc79b0d
gnu: r-org-dm-eg-db: Use bioconductor-uri.
* gnu/packages/bioconductor.scm (r-org-dm-eg-db)[source]: Use
bioconductor-uri.
2019-12-04 09:30:58 +01:00
Ricardo Wurmus
1c05e637a4
gnu: r-org-ce-eg-db: Use bioconductor-uri.
* gnu/packages/bioconductor.scm (r-org-ce-eg-db)[source]: Use
bioconductor-uri.
2019-12-04 09:30:35 +01:00
Ricardo Wurmus
f83404bc5b
gnu: r-bsgenome-mmusculus-ucsc-mm10: Use bioconductor-uri.
* gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm10)[source]:
Use bioconductor-uri.
[arguments]: Enable substitution.
2019-12-04 09:29:56 +01:00
Ricardo Wurmus
51dc4a2d70
gnu: r-bsgenome-mmusculus-ucsc-mm9-masked: Use bioconductor-uri.
* gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm9-masked)[source]:
Use bioconductor-uri.
2019-12-04 09:29:26 +01:00
Ricardo Wurmus
21f6dae73d
gnu: r-bsgenome-mmusculus-ucsc-mm9: Use bioconductor-uri.
* gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm9)[source]:
Use bioconductor-uri.
[arguments]: Enable substitution.
2019-12-04 09:28:54 +01:00
Ricardo Wurmus
a47646bd05
gnu: r-bsgenome-hsapiens-ucsc-hg19-masked: Use bioconductor-uri.
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ucsc-hg19-masked)[source]:
Use bioconductor-uri.
2019-12-04 09:28:34 +01:00
Ricardo Wurmus
88e7c7db59
gnu: r-bsgenome-hsapiens-1000genomes-hs37d5: Use bioconductor-uri.
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-1000genomes-hs37d5)[source]:
Use bioconductor-uri.
[arguments]: Enable substitution.
2019-12-04 09:28:04 +01:00
Ricardo Wurmus
bf05ece1a2
gnu: r-bsgenome-dmelanogaster-ucsc-dm3-masked: Use bioconductor-uri.
* gnu/packages/bioconductor.scm (r-bsgenome-dmelanogaster-ucsc-dm3-masked)[source]:
Use bioconductor-uri.
2019-12-04 09:27:15 +01:00
Ricardo Wurmus
87073b7ecb
gnu: r-bsgenome-dmelanogaster-ucsc-dm3: Use bioconductor-uri.
* gnu/packages/bioconductor.scm (r-bsgenome-dmelanogaster-ucsc-dm3)[source]:
Use bioconductor-uri.
[arguments]: Enable substitution.
2019-12-04 09:26:22 +01:00
Ricardo Wurmus
149f351f38
gnu: r-bsgenome-dmelanogaster-ucsc-dm6: Use bioconductor-uri.
* gnu/packages/bioconductor.scm (r-bsgenome-dmelanogaster-ucsc-dm6)[source]:
Use bioconductor-uri.
[arguments]: Permit substitution.
2019-12-04 09:25:10 +01:00
Ricardo Wurmus
6998ecba74
gnu: r-bsgenome-celegans-ucsc-ce10: Use bioconductor-uri.
* gnu/packages/bioconductor.scm (r-bsgenome-celegans-ucsc-ce10)[source]: Use
bioconductor-uri.
[arguments]: Permit substitution.
2019-12-04 09:24:09 +01:00
Vagrant Cascadian
b5b0ee3bd0
gnu: r-unifiedwmwqpcr: Fix typo in description.
* gnu/packages/bioconductor (r-unifiedwmwqpcr)[description]: Fix typo.
2019-11-11 19:02:45 -08:00
Ricardo Wurmus
ca2b1dcfcd
gnu: r-xcms: Update to 3.6.2.
* gnu/packages/bioconductor.scm (r-xcms): Update to 3.6.2.
2019-10-21 18:23:07 +02:00
Ricardo Wurmus
b9f39ac986
gnu: r-mlinterfaces: Update to 1.64.1.
* gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.64.1.
2019-10-18 20:35:26 +02:00
zimoun
86fb2c63be
gnu: Add r-unifiedwmwqpcr.
* gnu/packages/bioconductor.scm (r-unifiedwmwqpcr): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-10-15 14:10:27 +02:00
zimoun
16e2e4f27b
gnu: Add r-htqpcr.
* gnu/packages/bioconductor.scm (r-htqpcr): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-10-15 14:10:21 +02:00
Ricardo Wurmus
40be965e28
gnu: Add r-phastcons100way-ucsc-hg19.
* gnu/packages/bioconductor.scm (r-phastcons100way-ucsc-hg19): New variable.
2019-10-14 18:09:37 +02:00
Ricardo Wurmus
326746e14c
gnu: r-variancepartition: Update to 1.14.1.
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.14.1.
[propagated-inputs]: Add r-biocparallel.
2019-10-06 23:08:47 +02:00
Ricardo Wurmus
eb796f53ef
gnu: r-mixomics: Update to 6.8.5.
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.8.5.
2019-10-06 23:08:47 +02:00
Ricardo Wurmus
1c2e573302
gnu: r-regioner: Update to 1.16.5.
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.16.5.
2019-10-06 23:08:47 +02:00
Ricardo Wurmus
d80a15696b
gnu: Add r-variancepartition.
* gnu/packages/bioconductor.scm (r-variancepartition): New variable.
2019-09-15 22:57:47 +02:00
Ricardo Wurmus
2a360cf6ac
gnu: Add r-wavetiling.
* gnu/packages/bioconductor.scm (r-wavetiling): New variable.
2019-09-15 22:54:21 +02:00
Ricardo Wurmus
f5349b4d5a
gnu: Add r-genomegraphs.
* gnu/packages/bioconductor.scm (r-genomegraphs): New variable.
2019-09-15 22:51:52 +02:00
Ricardo Wurmus
4c63eeb8a4
gnu: Add r-oligo.
* gnu/packages/bioconductor.scm (r-oligo): New variable.
2019-09-15 22:50:31 +02:00
Ricardo Wurmus
d6a5d9b24f
gnu: Add r-affxparser.
* gnu/packages/bioconductor.scm (r-affxparser): New variable.
2019-09-15 22:50:25 +02:00
Ricardo Wurmus
df8576e5c9
gnu: Add r-variantfiltering.
* gnu/packages/bioconductor.scm (r-variantfiltering): New variable.
2019-09-15 22:41:03 +02:00
Ricardo Wurmus
bb0024dc69
gnu: Add r-reqon.
* gnu/packages/bioconductor.scm (r-reqon): New variable.
2019-09-15 21:07:57 +02:00
Ricardo Wurmus
e5dfcd8e26
gnu: Add r-seqbias.
* gnu/packages/bioconductor.scm (r-seqbias): New variable.
2019-09-15 21:07:56 +02:00
Ricardo Wurmus
12105c6c3a
gnu: Add r-affycoretools.
* gnu/packages/bioconductor.scm (r-affycoretools): New variable.
2019-09-15 20:58:26 +02:00
Ricardo Wurmus
01c7ba9982
gnu: Add r-oligoclasses.
* gnu/packages/bioconductor.scm (r-oligoclasses): New variable.
2019-09-15 20:58:26 +02:00
Ricardo Wurmus
15184fb386
gnu: Add r-reportingtools.
* gnu/packages/bioconductor.scm (r-reportingtools): New variable.
2019-09-15 20:58:25 +02:00
Ricardo Wurmus
83b4209122
gnu: Add r-pfam-db.
* gnu/packages/bioconductor.scm (r-pfam-db): New variable.
2019-09-15 20:57:26 +02:00
Ricardo Wurmus
4ca2d6c1a6
gnu: Add r-affycontam.
* gnu/packages/bioconductor.scm (r-affycontam): New variable.
2019-09-15 20:53:27 +02:00
Ricardo Wurmus
5094aa9472
gnu: Add r-affycompatible.
* gnu/packages/bioconductor.scm (r-affycompatible): New variable.
2019-09-15 20:53:21 +02:00
Ricardo Wurmus
5cf940de21
gnu: Add r-affycomp.
* gnu/packages/bioconductor.scm (r-affycomp): New variable.
2019-09-15 20:53:14 +02:00
Ricardo Wurmus
53b1e10f23
gnu: Add r-affydata.
* gnu/packages/bioconductor.scm (r-affydata): New variable.
2019-09-15 20:53:01 +02:00
Ricardo Wurmus
853211a51b
gnu: Add r-timeseriesexperiment.
* gnu/packages/bioconductor.scm (r-timeseriesexperiment): New variable.
2019-09-15 20:42:41 +02:00
Ricardo Wurmus
739b2d10f0
gnu: Add r-wavcluster.
* gnu/packages/bioconductor.scm (r-wavcluster): New variable.
2019-09-15 20:41:01 +02:00
Ricardo Wurmus
11f973e093
gnu: r-mixomics: Update to 6.8.4.
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.8.4.
2019-09-14 23:39:03 +02:00
Ricardo Wurmus
f8fb5b75c9
gnu: r-gtrellis: Update to 1.16.1.
* gnu/packages/bioconductor.scm (r-gtrellis): Update to 1.16.1.
2019-09-14 23:38:58 +02:00