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Author SHA1 Message Date
Ricardo Wurmus
7a67bca198
gnu: r-dimred: Update to 0.2.3. 
* gnu/packages/cran.scm (r-dimred): Update to 0.2.3.
 2019-05-11 12:05:33 +02:00
Ricardo Wurmus
d1d6e13eb6
gnu: r-regioner: Update to 1.16.1. 
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.16.1.
 2019-05-11 12:05:32 +02:00
Jonathan Brielmaier
41e09a159a
gnu: osc: Update to 0.165.0. 
* gnu/packages/build-tools.scm (osc): Update to 0.165.0.
[source]: Use git-fetch.
[arguments]: Use python3. osc_hotshot.py is gone. So, do not attempt to delete
it. Rename fix-filename-and-remove-unused phase to fix-filename phase.
[inputs]: Add rpm. Remove python2-urlgrabber. Replace python2-m2crypto and
python2-pycurl with python-m2crypto and python-pycurl.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2019-05-11 14:08:52 +05:30
Jonathan Brielmaier
c0023514a3
gnu: rpm: Update to 4.14.2.1. 
* gnu/packages/package-management.scm (rpm): Update to 4.14.2.1.
[inputs]: Use python instead of python-2.
[home-page]: Use HTTPS URI.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2019-05-11 14:08:51 +05:30
Diego Nicola Barbato
7f03133ba3
doc: Fix typo. 
* doc/guix.texi (shepherd-service): Replace 'requirements' with 'requirement'.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2019-05-11 13:11:35 +05:30
HiPhish
c3ebaec531
gnu: neovim: Update to 0.3.5. 
* gnu/packages/vim.scm (neovim): Update to 0.3.5.
[source]: Use git-fetch.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2019-05-11 12:56:13 +05:30
Ricardo Wurmus
825c39bfbb
etc: Refer to ci.guix.gnu.org in install script. 
* etc/guix-install.sh: Replace reference to ci.guix.info with ci.guix.gnu.org.
 2019-05-10 23:38:10 +02:00
Ludovic Courtès
dc5729a8e0
services: 'gc-root-service-type' now has a default value. 
* gnu/services.scm (gc-root-service-type)[default-value]: New field.
 2019-05-10 23:29:18 +02:00
Ludovic Courtès
76ae10a1f4
linux-container: Improve filtering of unnecessary file systems. 
* gnu/system/linux-container.scm (containerized-operating-system)[user-file-systems]:
Add trailing slash for the "/dev/" and "/sys/" prefixes.
 2019-05-10 23:29:18 +02:00
Ludovic Courtès
f8885ecab6
system: Export 'operating-system-default-essential-services'. 
* gnu/system.scm (essential-services): Rename to...
(operating-system-default-essential-services): ... this.
(<operating-system>)[essential-services]: Adjust accordingly.
 2019-05-10 23:29:18 +02:00
Leo Famulari
755a6027ce
gnu: Go 1.11: Update to 1.11.10. 
* gnu/packages/golang.scm (go-1.11): Update to 1.11.10.
 2019-05-10 13:30:07 -04:00
Nicolas Goaziou
7a9158f83e
gnu: emacs-auctex: Update to 12.1.2. 
* gnu/packages/emacs-xyz.scm (emacs-auctex): Update to 12.1.2.
 2019-05-10 19:23:37 +02:00
Nicolas Goaziou
de1206dc5f
gnu: emacs-debbugs: Update to 0.18. 
* gnu/packages/emacs-xyz.scm (emacs-debbugs): Update to 0.18.
 2019-05-10 19:20:18 +02:00
Ricardo Wurmus
d13f3a033e
gnu: gnome-tweak-tool: Update to 3.28.1. 
Fixes <https://bugs.gnu.org/35597>.

* gnu/packages/gnome.scm (gnome-tweak-tool): Deprecate and rename...
(gnome-tweaks): ...to this.  Update to 3.28.1.
[build-system]: Use meson-build-system.
[arguments]: Adjust configure flags; pass glib-or-gtk? flag; remove custom
phases that are now provided by the meson-build-system; add phases "wrap" and
"wrap-gi-typelib".
[native-inputs]: Remove meson-for-build and ninja.
[home-page]: Update.
[description]: Use "Tweaks" instead of "Tweak Tool".
* gnu/packages/patches/gnome-tweak-tool-search-paths.patch: Rename file...
* gnu/packages/patches/gnome-tweaks-search-paths.patch: ...to this.
* gnu/local.mk (dist_patch_DATA): Update patch file name.
 2019-05-10 13:31:32 +02:00
Ricardo Wurmus
496b024fde
gnu: Add r-rqc. 
* gnu/packages/bioconductor.scm (r-rqc): New variable.
 2019-05-10 13:31:03 +02:00
Ricardo Wurmus
5e0241db84
gnu: Add r-quasr. 
* gnu/packages/bioconductor.scm (r-quasr): New variable.
 2019-05-10 13:31:03 +02:00
Ricardo Wurmus
5865606459
gnu: Add r-rhisat2. 
* gnu/packages/bioconductor.scm (r-rhisat2): New variable.
 2019-05-10 13:31:03 +02:00
Ricardo Wurmus
1444153913
gnu: Add r-sgseq. 
* gnu/packages/bioconductor.scm (r-sgseq): New variable.
 2019-05-10 13:31:03 +02:00
Ricardo Wurmus
30f1029f4c
gnu: Add r-xgboost. 
* gnu/packages/cran.scm (r-xgboost): New variable.
 2019-05-10 13:31:03 +02:00
Ricardo Wurmus
29591ca611
gnu: Add r-citr. 
* gnu/packages/cran.scm (r-citr): New variable.
 2019-05-10 13:31:02 +02:00
Ricardo Wurmus
afc4370d4c
gnu: Add r-refmanager. 
* gnu/packages/cran.scm (r-refmanager): New variable.
 2019-05-10 13:31:02 +02:00
Ricardo Wurmus
85625cae66
gnu: Add r-ggfortify. 
* gnu/packages/cran.scm (r-ggfortify): New variable.
 2019-05-10 13:31:02 +02:00
Ricardo Wurmus
c9487dfadc
gnu: Add r-plot3d. 
* gnu/packages/cran.scm (r-plot3d): New variable.
 2019-05-10 13:31:02 +02:00
Ricardo Wurmus
70debac5f1
gnu: Add r-enrichr. 
* gnu/packages/cran.scm (r-enrichr): New variable.
 2019-05-10 13:31:02 +02:00
Ricardo Wurmus
5bea832f72
gnu: Add r-dalex. 
* gnu/packages/cran.scm (r-dalex): New variable.
 2019-05-10 13:31:02 +02:00
Ricardo Wurmus
4d06ef4b71
gnu: Add r-rbowtie. 
* gnu/packages/bioconductor.scm (r-rbowtie): New variable.
 2019-05-10 13:31:02 +02:00
Ricardo Wurmus
8c42f8f6e8
gnu: Add r-iclusterplus. 
* gnu/packages/bioconductor.scm (r-iclusterplus): New variable.
 2019-05-10 13:31:01 +02:00
Mark H Weaver
b40a36baff
gnu: linux-libre: Update to 5.1. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.1.
(%linux-libre-hash): Update hash.
(%linux-libre-5.0-patches): Rename to ...
(%linux-libre-5.1-patches): ... this.
(linux-libre, linux-libre-arm-generic, linux-libre-arm-veyron)
(linux-libre-arm-omap2plus): Use %linux-libre-5.1-patches.
(vhba-module): Move definition below the kernel packages.
* gnu/packages/aux-files/linux-libre/5.0-arm-veyron.conf,
gnu/packages/aux-files/linux-libre/5.0-arm.conf,
gnu/packages/aux-files/linux-libre/5.0-arm64.conf,
gnu/packages/aux-files/linux-libre/5.0-i686.conf,
gnu/packages/aux-files/linux-libre/5.0-x86_64.conf: Delete files.
* gnu/packages/aux-files/linux-libre/5.1-arm-veyron.conf,
gnu/packages/aux-files/linux-libre/5.1-arm.conf,
gnu/packages/aux-files/linux-libre/5.1-arm64.conf,
gnu/packages/aux-files/linux-libre/5.1-i686.conf,
gnu/packages/aux-files/linux-libre/5.1-x86_64.conf: New files.
* Makefile.am (AUX_FILES): Adjust accordingly.
 2019-05-10 00:00:49 -04:00
Ivan Petkov
3d8033af42
gnu: rust: Update to 1.34.1. 
* gnu/packages/rust.scm (rust): Update to 1.34.1.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2019-05-10 00:44:09 +02:00
Ivan Petkov
4ed20d3cfe
gnu: rust: Make source derivations smaller. 
* gnu/packages/rust.scm (rust-source-pre-1.32): Delete procedure.
(rust-bootstrapped-package-pre-1.32): Delete procedure.
(rust-bootstrapped-package): Remove optional keys, and return an origin.
(rust-uri): New variable.
(mrustc): Change native-input "rust" to use source of rust-1.19.
(rust-1.19)[source]: Define package source.
(rust-1.20): Use rust-bootstrapped-package.
(rust-1.21): Likewise.
(rust-1.22): Likewise.
(rust-1.23): Likewise.
(rust-1.24): Likewise.
(rust-1.25): Likewise.
(rust-1.26): Likewise.
(rust-1.27): Likewise.
(rust-1.28): Likewise.
(rust-1.29): Likewise.
(rust-1.30): Likewise.
(rust-1.31): Likewise.
(rust-1.32): Likewise.
(rust-1.33): Likewise.
(rust-1.34): Likewise.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2019-05-10 00:44:09 +02:00
Ivan Petkov
bea01c0d2b
gnu: rust: Delete install logs and manifests. 
* gnu/packages/rust.scm (rust-1.20)[arguments]<#:phases>[delete-install-logs]:
New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2019-05-10 00:44:08 +02:00
Ivan Petkov
e88735b45f
build/cargo-utils: Remove "src-name" parameter. 
* gnu/packages/gnuzilla.scm (icecat)[arguments]<#:phases>
[patch-cargo-checksums]: Delete "null-file" variable.
* gnu/packages/rust.scm (%cargo-reference-project-file): Delete variable.
* gnu/packages/rust.scm (rust-1.19): Remove reference to
"%cargo-reference-project-file".
* guix/build/cargo-utils.scm (generate-checksums): Remove "src-name"
parameter.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2019-05-10 00:44:08 +02:00
Ricardo Wurmus
d78010b81e
gnu: gcc-4.7: Hide package. 
* gnu/packages/gcc.scm (gcc-4.7): Wrap in "hidden-package" expression.
 2019-05-09 23:18:39 +02:00
Ricardo Wurmus
935568d5ce
gnu: emacs-dash: Update to 2.16.0. 
* gnu/packages/emacs-xyz.scm (emacs-dash): Update to 2.16.0.
 2019-05-09 22:51:33 +02:00
Ricardo Wurmus
b97b4624d0
gnu: Add guile-file-names. 
* gnu/packages/guile-xyz.scm (guile-file-names): New variable.
 2019-05-09 22:41:14 +02:00
Tobias Geerinckx-Rice
ae623b3f9d
gnu: seabios: Update to 1.12.1. 
This is a stable release despite the missing tarball.
<https://mail.coreboot.org/hyperkitty/list/seabios@seabios.org/thread/ONGRJVF3A45SAXOKBED52V2UD3YUWTRT/>

* gnu/packages/firmware.scm (seabios): Update to 1.12.1.
[source]: Use GIT-FETCH and GIT-FILE-NAME.
 2019-05-09 21:16:54 +02:00
Tobias Geerinckx-Rice
05de4c346d
gnu: man-pages: Update to 5.01. 
* gnu/packages/man.scm (man-pages): Update to 5.01.
 2019-05-09 21:16:53 +02:00
Tobias Geerinckx-Rice
34dce89a0c
gnu: emacs-sml-mode: Update to 6.9. 
* gnu/packages/emacs-xyz.scm (emacs-sml-mode): Update to 6.9.
 2019-05-09 21:16:53 +02:00
Tobias Geerinckx-Rice
b03a4ed465
gnu: cdemu-client: Update to 3.2.1. 
* gnu/packages/cdrom.scm (cdemu-client): Update to 3.2.1.
 2019-05-09 21:13:29 +02:00
Tobias Geerinckx-Rice
97dbf75a56
gnu: cdemu-daemon: Update to 3.2.2. 
* gnu/packages/cdrom.scm (cdemu-daemon): Update to 3.2.2.
 2019-05-09 21:13:28 +02:00
Tobias Geerinckx-Rice
d201571754
gnu: libmirage: Update to 3.2.2. 
* gnu/packages/cdrom.scm (libmirage): Update to 3.2.2.
 2019-05-09 21:13:28 +02:00
Tobias Geerinckx-Rice
819b3b8201
gnu: vhba-module: Update to 20190410. 
* gnu/packages/linux.scm (vhba-module): Update to 20190410.
 2019-05-09 21:13:28 +02:00
Tobias Geerinckx-Rice
38878020b0
gnu: cloc: Update to 1.82. 
* gnu/packages/code.scm (cloc): Update to 1.82.
[source]: Use GIT-FETCH and GIT-FILE-NAME.
 2019-05-09 21:13:28 +02:00
Marius Bakke
6c2180f5d0
services: dhcp-client: Ignore interfaces that are not ARP capable. 
* gnu/services/networking.scm (dhcp-client-service-type): Filter interfaces
that do not support the ARP protocol.
 2019-05-09 20:00:22 +02:00
Marius Bakke
5f5499d684
syscalls: Add 'arp-network-interface?'. 
* guix/build/syscalls.scm (IFF_NOARP): New variable.
(arp-network-interface?): New public procedure.
 2019-05-09 20:00:21 +02:00
Ludovic Courtès
a0dc97a517
pull: Display 'hash guix' hint when the new and old 'guix' are different. 
Fixes <https://bugs.gnu.org/35601>.
Reported by Diego Nicola Barbato <dnbarbato@posteo.de>.

Previously we were calling (which "guix") after the new profile had been
built and symlinked, so in most cases the hint would not be triggered,
even though it should have been triggered.

* guix/scripts/pull.scm (build-and-install)[guix-command]: New variable.
Compare PROFILE/bin/guix against GUIX-COMMAND.
 2019-05-09 17:42:31 +02:00
Ludovic Courtès
8deb65c378
tests: Ensure 'unshare' works before relying on it. 
Fixes <https://bugs.gnu.org/35642>.
Reported by Josh Holland <josh@inv.alid.pw>.

* tests/guix-pack-relocatable.sh: Before invoking 'unshare' at the
bottom, add "if unshare -r true" condition.
* tests/guix-pack.sh: Likewise.
 2019-05-09 17:42:31 +02:00
Marius Bakke
18160c3408
gnu: Use mirror://kernel.org in source URIs. 
* gnu/packages/linux.scm (bridge-utils, cpufrequtils, sbc)[source](uri): Use
"mirror://kernel.org" instead of www.kernel.org directly.
 2019-05-09 14:06:07 +02:00
Marius Bakke
aeb1ed1abc
gnu: wpa_supplicant: Update to 2.8 [security fixes]. 
This release fixes CVE-2019-9494, CVE-2019-9495, CVE-2019-9496, CVE-2019-9497,
CVE-2019-9498, CVE-2019-9499, and CVE-2019-11555.

* gnu/packages/admin.scm (wpa-supplicant-minimal): Update to 2.8.
[source](snippet): New field.  Disable D-Bus.
[arguments]: Change CONFIG_TLS to use OpenSSL rather than GnuTLS.  This is
required by many of the new default build-time settings.
[inputs]: Remove GNUTLS and LIBGCRYPT.  Add OPENSSL.
(wpa-supplicant)[arguments]: Remove obsolete CONFIG_CTRL_IFACE_DBUS=y.
 2019-05-09 13:43:03 +02:00
Marius Bakke
3fde051bfd
gnu: libtorrent-rasterbar: Update to 1.1.13. 
* gnu/packages/bittorrent.scm (libtorrent-rasterbar): Update to 1.1.13.
 2019-05-09 13:43:03 +02:00