Commit graph

1946 commits

Author SHA1 Message Date
nixo
c71b7b5b37
services: mpd: add more configuration options
* gnu/services/audio.scm (<mpd-configuration>): Add 'db-file', 'state-file'
  and 'sticker-file' fields.
* doc/guix.texi (Music Player Daemon): Document it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-03-15 23:27:59 +01:00
Ludovic Courtès
99aec37a78
pack: "-RR" produces PRoot-enabled relocatable binaries.
* gnu/packages/aux-files/run-in-namespace.c (exec_with_proot): New
function.
(main): When 'clone' fails, call 'rm_rf'.
[PROOT_PROGRAM]: When 'clone' fails, call 'exec_with_proot'.
* guix/scripts/pack.scm (wrapped-package): Add #:proot?.
[proot]: New procedure.
[build]: Compile with -DPROOT_PROGRAM when PROOT? is true.
* guix/scripts/pack.scm (%options): Set the 'relocatable?' value to
'proot when "-R" is passed several times.
(guix-pack): Pass #:proot? to 'wrapped-package'.
* tests/guix-pack-relocatable.sh: Use "-RR" on Intel systems that lack
user namespace support.
* doc/guix.texi (Invoking guix pack): Document -RR.
2019-03-15 23:27:59 +01:00
Leo Famulari
e3900a4d64
build-system/go: Build with a filesystem union of Go dependencies.
This basically changes (guix build-system go) so that instead of looking
up its dependencies in a list of directories in $GOPATH, all the
Go dependencies are symlinked into a single directory.

Fixes <https://bugs.gnu.org/33620>.

* guix/build/go-build-system.scm (setup-go-environment): New variable.
(setup-environment, install-source): Remove variables.
(unpack): Unpack the source relative to $GOPATH.
(install): Do not install the compiled objects in the 'pkg' directory.
Install the source code in this phase, and only install the source of
the package named by IMPORT-PATH.
* doc/guix.texi (Build Systems): Adjust accordingly.
* gnu/packages/docker.scm (docker): Import (guix build union) on the build side
and adjust to build phase name changes in (guix build-system go).
* gnu/packages/shellutils.scm (direnv): Likewise.
* gnu/packages/databases.scm (mongo-tools)[arguments]:
Set '#:install-source #f'.
* gnu/packages/music.scm (demlo)[arguments]: Move the 'install-scripts'
phase after the 'install' phase.
2019-03-14 15:34:26 -04:00
Marius Bakke
19008a22d1
Merge branch 'staging' into core-updates 2019-03-14 16:30:19 +01:00
Ludovic Courtès
e1c15e8b8e
doc: Document the graphical installer some more.
* doc/guix.texi (Preparing for Installation): Rewrite to specify the two
installation modes.
(Guided Graphical Installation): New node.
(Manual Installation): New node, with the former sections.
(After System Installation): New node.
* doc/images/installer-network.png, doc/images/installer-partitions.png,
doc/images/installer-resume.png: New files.
* doc/local.mk (dist_infoimage_DATA): Add them.
2019-03-13 23:12:43 +01:00
Ludovic Courtès
59e8044588
Remove traces of "GuixSD".
* gnu/bootloader/extlinux.scm (extlinux-configuration-file): Remove
mentions of "GuixSD".
* gnu/bootloader/grub.scm (install-grub-efi): Likewise.
* gnu/build/vm.scm (make-iso9660-image): Change default #:volume-id to
"Guix_image".
(initialize-hard-disk): Search for the "Guix_image" label.
* gnu/ci.scm (system-test-jobs, tarball-jobs): Remove "GuixSD".
* gnu/installer/newt/welcome.scm (run-welcome-page): Likewise.
* gnu/packages/audio.scm (supercollider)[description]: Likewise.
* gnu/packages/curl.scm (curl): Likewise.
* gnu/packages/emacs.scm (emacs): Likewise.
* gnu/packages/gnome.scm (network-manager): Likewise.
* gnu/packages/julia.scm (julia): Likewise.
* gnu/packages/linux.scm (alsa-plugins): Likewise.
(powertop, wireless-regdb): Likewise.
* gnu/packages/package-management.scm (guix): Likewise.
* gnu/packages/polkit.scm (polkit): Likewise.
* gnu/packages/tex.scm (texlive-bin): Likewise.
* gnu/services/base.scm (file-systems->fstab): Likewise.
* gnu/services/cups.scm (%cups-activation): Likewise.
* gnu/services/mail.scm (%dovecot-activation): Likewise.
* gnu/services/messaging.scm (prosody-configuration)[log]: Likewise.
* gnu/system/examples/vm-image.tmpl (vm-image-motd): Likewise.
* gnu/system/install.scm (installation-os)[file-systems]: Change root
file system label to "Guix_image".
* gnu/system/mapped-devices.scm (check-device-initrd-modules):
Remove "GuixSD".
* gnu/system/vm.scm (system-docker-image): Likewise.
(system-disk-image)[root-label]: Change to "Guix_image".
* gnu/tests/install.scm (run-install): Remove "GuixSD".
* guix/modules.scm (guix-module-name?): Likewise.
* nix/libstore/optimise-store.cc: Likewise.
2019-03-13 23:12:43 +01:00
Ludovic Courtès
13f62aef2d
maint: Change Guix System file names from guixsd-*.
* Makefile.am (GUIXSD_SUPPORTED_SYSTEMS): Rename to...
(GUIX_SYSTEM_SUPPORTED_SYSTEMS): ... this.
(GUIXSD_VM_SYSTEMS): Rename to...
(GUIX_SYSTEM_VM_SYSTEMS): ... this.
(GUIXSD_IMAGE_BASE): Rename to...
(GUIX_SYSTEM_IMAGE_BASE): ... this.  Change "guixsd-" to "guix-system-".
(GUIXSD_VM_IMAGE_BASE): Rename to...
(GUIX_SYSTEM_VM_IMAGE_BASE): ... this.  Change "guixsd-" to
"guix-system-".
(release): Adjust accordingly.
* doc/guix.texi (USB Stick and DVD Installation)
(Installing Guix in a VM, Invoking guix system)
(Running Guix in a VM): Adjust file names accordingly.
2019-03-13 23:12:43 +01:00
Julien Lepiller
61ce2e77ff
nls: Update 'de' translation of the manual. 2019-03-12 18:57:00 +01:00
Ludovic Courtès
082c648d28
services: mate-desktop: Deprecate the 'mate-desktop-service' procedure.
* gnu/services/desktop.scm (mate-desktop-service): Deprecate.
* doc/guix.texi (Desktop Services): Document 'mate-desktop-service-type'
and 'mate-desktop-configuration'.  Fix spelling of "Enlightenment".
2019-03-11 23:12:26 +01:00
Marius Bakke
96ab233df7
Merge branch 'staging' into core-updates 2019-03-10 18:47:02 +01:00
Ludovic Courtès
910aaa3b86
doc: Document references.
Suggested by "pelzflorian (Florian Pelz)" <pelzflorian@pelzflorian.de>.
Fixes <https://bugs.gnu.org/34574>.

* doc/guix.texi (Derivations): Document references.
2019-03-08 12:31:37 +01:00
Ludovic Courtès
d40ec4a0d0
pack: Add '--save-provenance'.
* guix/scripts/pack.scm (show-help, %options): Add '--save-provenance'.
(guix-pack)[manifest-from-args]: Honor it.
* doc/guix.texi (Invoking guix pack): Document it.
2019-03-07 00:00:18 +01:00
Marius Bakke
b4d7689f92
Merge branch 'staging' into core-updates 2019-03-04 23:05:01 +01:00
Ludovic Courtès
dca5821958
environment: Rename '--inherit' to '--preserve'.
Suggested by Eric Bavier and Ricardo Wurmus.

* guix/scripts/environment.scm (show-help, %options): Emit a deprecation
warning for "--inherit" and add -E/--preserve.
* tests/guix-environment.sh: Adjust accordingly.
* doc/guix.texi (Invoking guix environment): Update accordingly.
2019-03-04 15:22:59 +01:00
Ludovic Courtès
c483c5c82c
doc: Better explain the 'password' field of <user-account>.
* doc/guix.texi (User Accounts): Provide an example use of 'crypt', and
mention the security implications.
2019-03-04 15:22:58 +01:00
Julien Lepiller
15f1bff4b6
nls: Update 'fr' translation of the manual. 2019-03-01 21:52:26 +01:00
Marius Bakke
901236474a
Merge branch 'staging' into core-updates 2019-02-20 17:19:00 +01:00
Tobias Geerinckx-Rice
98808c8aed
doc: Fix typo.
* doc/guix.texi (Proceeding with the Installation): Fix typo.
2019-02-19 13:29:08 +01:00
Jan Nieuwenhuizen
24f11b06bb
services: xorg: Enable override of xserver-arguments.
* gnu/services/xorg.scm (xorg-start-command): Add parameter #:xserver-arguments.
* doc/guix.texi (X Window): Document it.
2019-02-17 08:48:49 +01:00
Ludovic Courtès
7af417502c
doc: '--inherit' option can be repeated.
* doc/guix.texi (Invoking guix environment): Mention that '--inherit'
can be repeated.
2019-02-17 00:04:56 +01:00
Christopher Baines
8b9a7b26c2
services: Improve the upower-service-type.
Add a description and default value. Switch the documentation to mention the
service-type and the configuration record, rather than the upower-service
procedure.

* gnu/services/desktop.scm (upower-service-type)[description, default-value]:
Define these fields.
(%desktop-services): Change (upower-service) to (service upower-service-type).
* doc/guix.texi (Desktop Services): Update the upower service documentation.
2019-02-16 22:05:15 +00:00
Ludovic Courtès
e6e599fa01
environment: Add '--inherit'.
* guix/scripts/environment.scm (purify-environment): Add 'white-list'
parameter and honor it.
(create-environment): Add #:white-list parameter and honor it.
(launch-environment): Likewise.
(launch-environment/fork): Likewise.
(show-help, %options): Add '--inherit'.
(guix-environment): Define 'white-list' and pass it to
'launch-environment/fork'.
* tests/guix-environment.sh: Test '--inherit'.
* doc/guix.texi (Invoking guix environment): Document it.
2019-02-16 01:00:08 +01:00
Ludovic Courtès
d423d6892a
doc: Add a "Development" chapter.
* doc/guix.texi (Managing Software the Guix Way): Add reference to the
"Development" section.
(Invoking guix environment, Invoking guix pack): Move to...
(Development): ... here.  New node.
2019-02-13 16:19:54 +01:00
Ludovic Courtès
499b166d1c
guix system: Add 'delete-generations'.
* guix/scripts/package.scm (delete-matching-generations): Export.
* guix/scripts/system.scm (show-help): Add 'delete-generations'.
(process-command): Honor it.
(guix-system): Support it.
* doc/guix.texi (Invoking guix system): Document it.
2019-02-13 16:19:54 +01:00
Chris Marusich
b0a372637f
doc: Clarify channel file structure.
Suggested by Hartmut Goebel <h.goebel@crazy-compilers.com>.

* doc/guix.texi (Channels): Clarify how a channel author should structure the
files in their channel's Git repository.
2019-02-12 21:39:38 -08:00
Marius Bakke
ebbb7286b9
Merge branch 'master' into core-updates 2019-02-09 21:11:00 +01:00
Ludovic Courtès
50a93adc05
Merge branch 'staging' 2019-02-09 15:14:59 +01:00
Ludovic Courtès
024a6bfba9
guix build: '--with-branch' & co. fetch submodules.
* guix/scripts/build.scm (transform-package-source-branch)[replace]: Add
'recursive?' field to the new package.
2019-02-08 10:41:13 +01:00
Ludovic Courtès
9c6124f829
doc: Mention flag to get an ISO image.
* doc/guix.texi (Building the Installation Image): Add
'--file-system-type=iso9660'.
2019-02-07 15:46:45 +01:00
Ricardo Wurmus
8ad8568bb5
doc: Raise subsections.
* doc/guix.texi (Reduced Binary Seed Bootstrap, Preparing to Use the Bootstrap
Binaries): Raise subsections.
2019-02-06 15:36:35 +01:00
Ricardo Wurmus
ba88eea2b3
Merge branch 'master' into core-updates 2019-02-06 13:03:26 +01:00
Danny Milosavljevic
89339a35bd
doc: Document how to enable qemu binfmt service and how to use it.
* doc/contributing.texi (Submitting Patches): Document how to enable qemu
binfmt service and how to use it.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2019-02-04 17:56:28 +01:00
Ludovic Courtès
f73ab814a5
doc: Show how to install Emacs, Guile, and Geiser.
* doc/contributing.texi (The Perfect Setup): Show "guix package -i"
command line.
2019-02-04 00:03:30 +01:00
Tobias Geerinckx-Rice
2049cbb326
doc: Update left-over references to lsh.
* doc/guix.texi (Using the Configuration System, Defining Services):
Refer to OpenSSH instead of lsh.
2019-02-01 17:39:51 +01:00
Marius Bakke
0747328e31
Merge branch 'master' into staging 2019-01-31 23:32:56 +01:00
Ludovic Courtès
796a4491fd
doc: Clarify 'sudo' vs. 'guix pull' and 'guix system reconfigure'.
* doc/guix.texi (Proceeding with the Installation): Clarify use of
"sudo" with "guix pull" and "guix system reconfigure".
2019-01-28 15:45:48 +01:00
Ludovic Courtès
280e9c2a26
doc: Update bit about GUIX_LD_WRAPPER_ALLOW_IMPURITIES.
This is a followup to d0a2db47fb.

* doc/guix.texi (Application Setup)[The GCC toolchain]: Adjust bit
about GUIX_LD_WRAPPER_ALLOW_IMPURITIES.
2019-01-26 00:06:55 +01:00
Ludovic Courtès
1379319fe7
doc: Switch from "GuixSD" to "Guix System".
* doc/guix.texi (Introduction): Add footnote about the change from
"GuixSD" to "Guix System".
Replace occurrences of "GuixSD" with "Guix System", "Guix", "system", or
other appropriate phrases.
2019-01-26 00:06:55 +01:00
Ludovic Courtès
9b104bfeef
doc: Make /dev/kvm note more visible.
Suggested by Giovanni Biscuolo <g@xelera.eu>.

* doc/guix.texi (Invoking guix system): Move note about /dev/kvm access
to the beginning of the 'vm' action description.
2019-01-26 00:06:55 +01:00
Ricardo Wurmus
02d38bd3a2
Merge branch 'master' into staging 2019-01-25 15:20:25 +01:00
Ludovic Courtès
bd414e273c
weather: Add '--coverage'.
* guix/scripts/weather.scm (show-help, %options): Add '--coverage'.
(package-partition-boundary, package->output-mapping)
(substitute-oracle, report-package-coverage-per-system)
(report-package-coverage): New procedures.
(guix-weather): Honor '--coverage'.
* doc/guix.texi (Invoking guix weather): Document it.
2019-01-25 14:06:37 +01:00
Pierre Neidhardt
b1c4dafbf1
doc: Replace some cons* with beginner-friendly (append (list ...)).
* doc/guix.texi (Base Services): Do it.
2019-01-23 18:01:16 +01:00
Pierre Neidhardt
286749bd44
doc: Correct EFI-specific system configuration details.
* doc/guix.texi (Preparing for Installation): /boot/efi is arbitrary.
Mention /boot/efi consistently.
(Proceeding with the Installation): Make it explicit that the EFI mount point
must both be mounted and be specified in the system configuration.
2019-01-23 18:01:16 +01:00
Ricardo Wurmus
5aaef5c5de
Merge branch 'master' into staging 2019-01-23 12:08:27 +01:00
Ludovic Courtès
ce6236f419
doc: Move "Package Modules" under "Programming Interface".
* doc/guix.texi (Package Modules): Move to...
(Programming Interface): ... here.  Turn into a section.
2019-01-22 23:04:06 +01:00
Ludovic Courtès
afe7408e19
doc: Move "Packaging Guidelines" under "Contributing".
* doc/guix.texi (Packaging Guidelines): Move to...
* doc/contributing.texi (Packaging Guidelines): ... here.  Turn into a
section.  Adjust references to "Contributing".
2019-01-22 23:04:06 +01:00
Ludovic Courtès
83db020506
doc: Move "System Installation" right after "Installation".
* doc/guix.texi (System Installation): Move right after "Installation".
2019-01-22 23:04:06 +01:00
Ludovic Courtès
b40de030d1
doc: Move sections under "GNU Distribution" one level higher.
* doc/guix.texi (Introduction): Add note about Guix System.
[Managing Software the Guix Way]: New section heading.
[GNU Distribution]: New subsection of "Introduction".  Mention "Guix
System" rather than "GuixSD" and update the list of supported systems.
(GNU Distribution): Remove as a chapter.
(System Installation, System Configuration, Documentation)
(Installing Debugging Files, Security Updates, Package Modules)
(Packaging Guidelines, Bootstrapping, Porting): Turn these sections
into chapters.
2019-01-22 23:04:05 +01:00
Ludovic Courtès
f9e8a12379
store: Rename '&nix-error' to '&store-error'.
* guix/store.scm (&nix-error): Rename to...
(&store-error): ... this, and adjust users.
(&nix-connection-error): Rename to...
(&store-connection-error): ... this, and adjust users.
(&nix-protocol-error): Rename to...
(&store-protocol-error): ... this, adjust users.
(&nix-error, &nix-connection-error, &nix-protocol-error): Define these
condition types and their getters as deprecrated aliases.
* build-aux/run-system-tests.scm, guix/derivations.scm,
guix/grafts.scm, guix/scripts/challenge.scm,
guix/scripts/graph.scm, guix/scripts/lint.scm,
guix/scripts/offload.scm, guix/serialization.scm,
guix/ssh.scm, guix/tests.scm, guix/ui.scm,
tests/derivations.scm, tests/gexp.scm, tests/guix-daemon.sh,
tests/packages.scm, tests/store.scm, doc/guix.texi: Adjust to use the
new names.
2019-01-21 23:09:55 +01:00
Ludovic Courtès
3e2d4e69c3
Merge branch 'master' into staging 2019-01-20 22:12:10 +01:00
Ricardo Wurmus
65cd70ce42
services: openssh: Add escape hatch.
* gnu/services/ssh.scm (<openssh-configuration>)[extra-content]: New field.
* doc/guix.texi (Networking Services): Document it.
2019-01-17 17:58:35 +01:00
Mathieu Othacehe
2e7addd20b
doc: Document the graphical installer.
* doc/guix.texi (Preparing for Installation): Mention the graphical installer.
2019-01-17 14:04:21 +01:00
Damien Cassou
61b7f97177
doc: Add missing parameter to guix system reconfigure
* doc/guix.texi (Proceeding with the Installation): Mention that
  /etc/config.scm must be passed as parameter and that root is needed.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-16 14:07:38 +01:00
Ludovic Courtès
2e04ab7147
services: avahi: Deprecate the 'avahi-service' procedure.
* gnu/services/avahi.scm (<avahi-configuration>): Export getters.  Add
default values.
(avahi-service-type)[default-value]: New field.
(avahi-service): Mark as deprecated.
* gnu/services/desktop.scm (%desktop-services): Use the 'service' form
instead of calling 'avahi-service'.
* gnu/tests/base.scm (%avahi-os): Likewise.
* doc/guix.texi (Base Services): Adjust example accordingly.
(Networking Services): Update accordingly.
2019-01-16 14:07:37 +01:00
Marius Bakke
6764f94317
Merge branch 'master' into staging 2019-01-13 01:40:04 +01:00
Ludovic Courtès
f1de676ea8
guix build: Re-purpose '--verbosity' and add '--debug'.
The previous '--verbosity' option was misleading and rarely what users
were looking for.  The new option provides a consistent way to choose
whether or not to display the build log.

* guix/scripts/build.scm (show-build-options-help): Remove "--verbosity"
and add "--debug".
(set-build-options-from-command-line): Use the 'debug key of OPTS for
 #:verbosity.
(%standard-build-options): Change "verbosity" to "debug".  Use
'string->number*' instead of 'string->number'.
(%default-options): Change 'verbosity to 'debug and add a 'verbosity
key.
(show-help): Add '--verbosity'.
(%options): Likewise, and change '--quiet' to set the 'verbosity key of
RESULT.
(guix-build): Use 'with-status-verbosity' instead of parameterizing
CURRENT-BUILD-OUTPUT-PORT, honor the 'verbosity key of OPTS, and remove
'quiet?'.
* guix/scripts/environment.scm (show-help, %options): Add '--verbosity'.
(%default-options): Add 'debug'.
(guix-environment): Honor the 'verbosity key of OPTS.
* guix/scripts/pack.scm (%default-options): Add 'debug.
(%options, show-help): Add '--verbosity'.
(guix-pack): Honor the 'verbosity key of OPTS.
* guix/scripts/package.scm (%default-options): Add 'debug.
(show-help, %options): Add '--verbosity'.  Mark '--verbose' as
deprecated and change it to set 'verbosity.
(guix-package): Honor the 'verbosity key of OPTS and remove 'verbose?'.
* guix/scripts/pull.scm (%default-options): Add 'debug.
(show-help, %options): Add '--verbosity'.
(guix-pull): Honor the 'verbosity key of OPTS.
* guix/scripts/system.scm (show-help, %options): Add '--verbosity'.
(%default-options): Add 'debug.
(guix-system): Honor the 'verbosity key of OPTS.
* guix/scripts/archive.scm (%default-options): Add 'debug,
'print-build-trace?, 'print-extended-build-trace?, and
'multiplexed-build-output?.
(show-help, %options): Add '--verbosity'.
(export-from-store): Remove call to 'set-build-options-from-command-line'.
(guix-archive): Wrap body in 'with-status-verbosity'. Add call to
'set-build-options-from-command-line.
* doc/guix.texi (Common Build Options): Document '--verbosity' and
'--debug'.
(Additional Build Options): Adjust description of '--quiet'.
2019-01-11 12:14:38 +01:00
Ludovic Courtès
84a2de36a1
services: Deprecate a few more service procedures.
These procedures were already either undocumented (and de facto
deprecated) or documented as deprecated or redundant.

* gnu/services/base.scm (guix-service, guix-publish-service): Mark as
deprecated.
* gnu/services/mcron.scm (mcron-service): Likewise.
* gnu/services/networking.scm (tor-service): Likewise.
* doc/guix.texi (Scheduled Job Execution): Remove 'mcron-service' and
adjust example.
(Networking Services): Remove 'tor-service'.
* gnu/tests/base.scm (%mcron-os): Use 'mcron-service-type' instead of
'mcron-service'.
* gnu/tests/networking.scm (%tor-os): Use 'tor-service-type' instead of
'tor-service'.
* tests/guix-system.sh: Likewise.
2019-01-11 12:14:38 +01:00
Danny Milosavljevic
8af4c335e3
services: Add docker.
* gnu/services/docker.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi (Miscellaneous Services): Document the service.
2019-01-10 03:00:55 +01:00
Ludovic Courtès
0991fd5336
build: Require Guile 2.2.
* configure.ac: Require Guile 2.2.
* README: Adjust accordingly.
* doc/guix.texi (Requirements): Likewise.
* gnu/packages/package-management.scm (guile2.0-guix): Deprecate.
(guix-minimal): Inherit from GUIX, not from GUILE2.0-GUIX.
2019-01-09 14:47:53 +01:00
Efraim Flashner
0e28967250
Merge remote-tracking branch 'origin/master' into staging 2019-01-09 10:52:41 +02:00
Ricardo Wurmus
6df4d8338d
doc: Recommend using the installer script.
* doc/guix.texi (Installation): Make it clear that the installer script is the
recommended, easy way to install Guix.
2019-01-08 18:49:13 +01:00
Marius Bakke
af8fd11bed
Merge branch 'master' into staging 2018-12-27 15:44:38 +01:00
Efraim Flashner
c180017b6f
lint: Check for unstable tarballs.
* guix/scripts/lint.scm (check-source-unstable-tarball): New procedure.
(%checkers): Add it.
* tests/lint.scm ("source-unstable-tarball", "source-unstable-tarball:
source #f", "source-unstable-tarball: valid", "source-unstable-tarball:
package named archive", "source-unstable-tarball: not-github",
"source-unstable-tarball: git-fetch"): New tests.
* doc/guix.texi (Invoking guix lint): Document it.
2018-12-27 14:55:54 +02:00
Ludovic Courtès
5923102f7b
pull: Add '--system'.
* guix/scripts/pull.scm (%options): Add '--system'.
(guix-pull): Honor it.
* doc/guix.texi (Invoking guix pull): Document it.
2018-12-27 12:08:25 +01:00
Marius Bakke
2bfcdbce51
Merge branch 'master' into staging 2018-12-26 16:03:09 +01:00
Ludovic Courtès
ed7b44370f
offload: Use (guix inferior) instead of (ssh dist node).
Using inferiors and thus 'guix repl' simplifies setup on build
machines (no need to worry about GUILE_LOAD_PATH etc.)

Furthermore, the 'guix repl -t machine' protocol running in a remote
pipe addresses several issues with the current implementation of nodes
and RREPLs in Guile-SSH: fewer round trips, doesn't leave a 'guile
--listen' process behind it, stateless (since a new process is started
each time), more efficient (the SSH channel can be reused), more
reliable (no 'pgrep', 'pkill', and shellology; see
<https://github.com/artyom-poptsov/guile-ssh/issues/11> as an example.)

* guix/ssh.scm (inferior-remote-eval): New procedure.
(send-files): Use it instead of 'make-node' and 'node-eval'.
* guix/scripts/offload.scm (node-guile-version): New procedure.
(node-free-disk-space, transfer-and-offload, node-load)
(choose-build-machine, assert-node-has-guix): Use 'remote-inferior'
instead of 'make-node' and 'inferior-eval' instead of 'node-eval'.
(assert-node-can-import, assert-node-can-export): Likewise, and add
'session' parameter.
(check-machine-availability): Likewise, and add calls to
'close-inferior' and 'disconnect!'.
(check-machine-status): Likewise.
* doc/guix.texi (Daemon Offload Setup): Remove bit related to 'guile' in
$PATH and $GUILE_LOAD_PATH; mention 'guix' alone.
2018-12-24 16:06:32 +01:00
Efraim Flashner
b599fed5b0
doc: Fix typo.
This is a follow-up to c39491829a

* doc/guix.texi (Invoking guix refresh): Fix texinfo markup
2018-12-24 12:39:20 +02:00
Efraim Flashner
c39491829a
scripts: refresh: Allow searching recursively.
* guix/scripts/refresh.scm (refresh-recursive, list-transitive): New
procedures.
(show-help): Document it.
(guix-refresh): Add flags and checks for new options.
* doc/guix.texi (Invoking guix refresh): Document new options.
2018-12-24 12:19:17 +02:00
Efraim Flashner
dcad57d5fc
services: Add quassel.
* gnu/services/messaging.scm (<quassel-configuration>): New record type.
(%quassel-account, %quassel-activation): New procedures.
(quassel-service-type): New variable.
* gnu/tests/messaging.scm (%test-quassel): New variable.
(run-quassel-test): New procedure.
* doc/guix.texi (Messaging): Document quassel service.
2018-12-24 11:18:36 +02:00
Arun Isaac
0865d8a8f6
guix: lint: Check for source URIs redirecting to GitHub.
* guix/scripts/lint.scm (check-github-uri): New procedure.
(%checkers): Add it.
* doc/guix.texi (Invoking guix lint): Document it.
* tests/lint.scm ("github-url", "github-url: one suggestion"): New tests.
2018-12-24 08:15:17 +05:30
Marius Bakke
02bf685d00
Merge branch 'master' into staging 2018-12-23 23:26:04 +01:00
Tobias Geerinckx-Rice
6f832eba1e
doc: Fix ‘serice’ -> ‘service’ typos.
* doc/guix.texi (Web Services): Fix typos.
2018-12-23 17:57:07 +01:00
Marius Bakke
f30830b2e6
Merge branch 'master' into staging 2018-12-22 15:26:30 +01:00
Ludovic Courtès
295430f0cf
doc: '--search' is case-insensitive.
Suggested by Chris Marusich <cmmarusich@gmail.com>.

* doc/guix.texi (Invoking guix package): Mention that --search is
case-insensitive.
2018-12-21 23:50:13 +01:00
Ludovic Courtès
86974d8a92
Merge branch 'master' into core-updates 2018-12-20 18:39:04 +01:00
Julien Lepiller
6e8986c838
build: Add dune-build-system.
* guix/build/dune-build-system.scm,
  guix/build-system/dune.scm: New files.
* Makefile.am (MODULES): Add them.
* doc/guix.texi (Build Systems): Document dune-build-system.
* guix/build-system/ocaml.scm (lower, default-findlib, default-ocaml): Export
them.
(package-with-explicit-ocaml): Also transform packages built with
dune-build-system.
2018-12-18 22:16:23 +01:00
Ludovic Courtès
65c8a04370
doc: Remove stale reference to 'hydra.gnu.org'.
Reported by Thomas Schmitt <scdbackup@gmx.net>.

* doc/guix.texi (Binary Installation): Refer to SUBSTITUTE-SERVER, not
to 'hydra.gnu.org'.
2018-12-18 16:04:25 +01:00
swedebugia
bd5a81f9b8
guix system: Clarify the three strategies available.
* guix/scripts/system.scm (show-help): Clarify the three choices.
* doc/guix.texi (Invoking guix system): Add 3 @cindex to make on-error=strategy
easier to find.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-12-18 16:04:25 +01:00
Ludovic Courtès
4d55431d89
doc: Fix typo in '.guix-channel' example.
* doc/guix.texi (Channels): Remove extra quote in '.guix-channel'
example.
2018-12-18 16:04:25 +01:00
Jelle Licht
b8d5fbd86f
doc: Replace 'https-port' with 'listen' in nginx php example.
* doc/guix.texi (Web Services): Update accordingly.
2018-12-18 14:50:47 +01:00
Ludovic Courtès
a93c160631
environment: Support package transformation options.
Fixes <https://bugs.gnu.org/33776>.
Reported by Adrien Guilbaud <adrien.guilbaud@inria.fr>.

* guix/scripts/environment.scm (show-help): Add call to
'show-transformation-options-help'.
(%options): Add %TRANSFORMATION-OPTIONS.
(options/resolve-packages): Add 'store' parameter.
[transform, package->manifest-entry*]: New procedures.
Use 'package->manifest-entry*' instead of 'package->manifest-entry'.
(guix-environment): Move definition of 'manifest' within 'with-store'.
* tests/guix-environment.sh: Add test.
2018-12-17 23:33:42 +01:00
Ludovic Courtès
bafcf1f32f
services: udev: Add 'rules' action.
* gnu/services/base.scm (udev-shepherd-service): Add 'actions' field.
* doc/guix.texi (Base Services): Move "@end deffn" after 'udev-service'
definition.  Mention 'herd rules udev'.
2018-12-17 23:33:42 +01:00
Oleg Pykhalov
85c07cff9c
services: monitoring: Add 'zabbix-front-end'.
* gnu/services/monitoring.scm (nginx-server-configuration-list?,
serialize-nginx-server-configuration-list, zabbix-front-end-configuration,
zabbix-front-end-config, zabbix-front-end-activation,
generate-zabbix-front-end-documentation): New procedures.
(%zabbix-front-end-configuration-nginx, %maintenance.inc.php,
zabbix-front-end-service-type): New variables.
* doc/guix.texi (Monitoring Services): Document this.
2018-12-17 22:09:11 +03:00
Oleg Pykhalov
e517161d6b
services: php-fpm: Add 'timezone' configuration.
* gnu/services/web.scm: (<php-fpm-configuration>)[timezone]: New record field.
(default-php-fpm-config, php-fpm-shepherd-service, php-fpm-activation): Use
this.
* doc/guix.texi (Web Services): Document this.
2018-12-17 22:09:10 +03:00
Oleg Pykhalov
6106d7cae4
services: monitoring: Add 'zabbix-agent'.
* gnu/services/monitoring.scm (zabbix-server-service-type,
zabbix-agent-account, zabbix-agent-activation, zabbix-agent-config-file,
zabbix-agent-shepherd-service, generate-zabbix-agent-documentation): New
procedures.
(zabbix-agent-service-type): New 'service-type'.
* gnu/tests/monitoring.scm (run-zabbix-server-test): Test 'zabbix-agent'.
(%zabbix-os): Add 'zabbix-agent' service.
* doc/guix.texi (Monitoring Services): Document 'zabbix-agent'.
2018-12-17 22:09:10 +03:00
Oleg Pykhalov
6b1c4179e2
services: monitoring: Add 'zabbix-server'.
* gnu/services/monitoring.scm (uglify-field-name, serialize-field,
serialize-number, serialize-list, serialize-string, group?, serialize-group,
include-files?, serialize-include-files, zabbix-server-account,
zabbix-server-config-file, zabbix-server-activation,
zabbix-server-shepherd-service, generate-zabbix-server-documentation,
extra-options, serialize-extra-options): New procedures.
(zabbix-server-service-type): New variable.
* gnu/tests/monitoring.scm (%psql-user-create-zabbix,
%psql-db-zabbix-create-script, %psql-db-create-zabbix, %psql-db-import-zabbix,
%zabbix-os, %test-zabbix): New variables.
(run-zabbix-server-test): New procedure.
* doc/guix.texi (Monitoring Services): Document 'zabbix-server'.

squash! services: monitoring: Add 'zabbix-server'.
2018-12-17 22:09:10 +03:00
Jan Nieuwenhuizen
b3bf38a560
doc: Update mesboot graph without bootstrap-guile.
* doc/images/gcc-mesboot-bag-graph.dot: Update.
2018-12-16 22:49:10 +01:00
Pierre Neidhardt
0afeb7468c
doc: Replace @command by @code for packages
* doc/contributing.texi (Submitting Patches): Replace @command by @code for
  packages.
2018-12-15 19:21:08 +01:00
Pierre Neidhardt
024e358cb9
doc: Merge "discourage use of texlive" with existing paragraph on "guix size"
* doc/contributing.texi (Submitting Patches): Merge "discourage use of
  texlive" with existing paragraph on "guix size".
2018-12-15 00:20:35 +01:00
Pierre Neidhardt
dc56dc025d
doc: Discourage the use of texlive as input
* doc/contributing.texi (Submitting Patches): Discourage the use of texlive as
  input.
2018-12-14 23:32:39 +01:00
Marius Bakke
12878d12ac
Merge branch 'master' into staging 2018-12-12 22:00:52 +01:00
Marius Bakke
b03e4fd526
Merge branch 'master' into core-updates 2018-12-11 22:18:05 +01:00
Ricardo Wurmus
af12790bdd
guix: Add support for channel dependencies.
* guix/channels.scm (<channel-metadata>): New record.
(read-channel-metadata, channel-instance-dependencies): New procedures.
(latest-channel-instances): Include channel dependencies; add optional
argument PREVIOUS-CHANNELS.
(channel-instance-derivations): Build derivation for additional channels and
add it as dependency to the channel instance derivation.
* doc/guix.texi (Channels): Add subsection "Declaring Channel Dependencies".
* tests/channels.scm: New file.
* Makefile.am (SCM_TESTS): Add it.
2018-12-09 13:55:22 +01:00
Marius Bakke
fbb7b04a85
Merge branch 'master' into staging 2018-12-09 00:18:32 +01:00
Ludovic Courtès
bd3e1f1694
doc: Update "Limitations".
* doc/guix.texi (Limitations): Update package count.
2018-12-05 00:08:28 +01:00
Ludovic Courtès
606b1a1e6b
doc: Update substitute server.
Fixes an accidental revert in commit
0a5fa004f7.

* doc/guix.texi (SUBSTITUTE-SERVER): Really change to ci.guix.info.
2018-12-04 15:28:07 +01:00
Ludovic Courtès
0a5fa004f7
build: Default to https://ci.guix.info for substitutes.
* config-daemon.ac (guix_substitute_urls): Always default to
"https://ci.guix.info".
* doc/guix.texi (SUBSTITUTE-SERVER): Switch to ci.guix.info.
* guix/scripts/build.scm (%default-log-urls): Likewise.
* guix/scripts/substitute.scm (%default-substitute-urls): Likewise.
* guix/store.scm (%default-substitute-urls): Likewise.
2018-12-04 10:57:56 +01:00
Ludovic Courtès
0bc02becca
Remove most references to hydra.gnu.org.
* Makefile.am (assert-binaries-available): Don't mention hydra.gnu.org
in comment.
* build-aux/check-available-binaries.scm: Likewise.
* build-aux/check-final-inputs-self-contained.scm: Likewise.
* doc/guix.texi (SUBSTITUTE-SERVER): New variable.
Use it throughout instead of "mirror.hydra.gnu.org".
* doc/contributing.texi (Submitting Patches): Likewise.
* gnu/services/base.scm (hydra-key-authorization)
(guix-activation): Remove mentions of "hydra.gnu.org" in comments and
messages.
* gnu/system/install.scm (%installation-services): Likewise.
* guix/scripts/size.scm (guix-size): Likewise.
2018-12-04 10:57:56 +01:00
Marius Bakke
99f63f011d
Merge branch 'master' into staging 2018-12-03 19:15:17 +01:00
Eric Bavier
a8fdca11d8
doc: Remove footnotes about guile-json requirements.
Follow-up to 6efccabe4e.

* doc/guix.texi (Invoking guix import)[pypi, gem, cpan, json]: Remove
footnotes mentioning requirement for Guile-JSON.
2018-12-03 08:56:06 -06:00
Eric Bavier
6776af04d4
Make Guile-JSON a required dependency.
* README (Requirements): Remove "optional" verbiage.
* doc/guix.texi (Requirements): Move Guile-JSON from optional to required.
* configure.ac (HAVE_GUILE_JSON): Remove Automake conditional.
(have_guile_json): Error if not "yes".
* Makefile.am (MODULE, SCM_TESTS)[HAVE_GUILE_JSON]: Add modules and tests
unconditionally.
* gnu/packages/package-mangement.scm (guix-minimal)[propagated-inputs]: Leave
guile-json input.
2018-12-02 17:56:05 -06:00
Miguel Ángel Arruga Vivas
f31e586b58
doc: Typos in guix.texi manual.
* doc/guix.texi (USB Stick and DVD Installation): use @var{system}
consistently.
(Proceeding with the Installation): use @email markup instead of @file.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-12-02 23:28:49 +01:00
Ludovic Courtès
793dcd8c67
nls: Update 'de' translation of the manual. 2018-12-02 23:08:47 +01:00
Julien Lepiller
adfb167f12
nls: Update 'fr' translation. 2018-12-02 14:31:20 +01:00
Nicolas Goaziou
0afb908c50
doc: Even more spacing typos.
* doc/guix.texi (Binary Installation):
(Invoking guix pack):
(Build Systems):
(Invoking guix graph):
(Invoking guix environment):
(Networking Services):
(Mail Services):
(Web Services):
(Invoking guix system): Prevent Texinfo from ending a sentence too early.
2018-12-02 10:19:40 +01:00
Nicolas Goaziou
be34131b9e
doc: Fix more spacing typos.
* doc/guix.texi (Channels):
(Additional Build Options):
(Invoking guix lint):
(Base Services):
(Networking Services):
(Mail Services):
(Messaging Services):
(Web Services):
(Certificate Services):
(Version Control Services):
(Python Modules): Prevent Texinfo from ending a sentence too early.
2018-12-02 10:13:30 +01:00
Nicolas Goaziou
b2e5048c0c
doc: Fix typo.
* doc/guix.texi (Invoking guix refresh): Prevent spurious space after "e.g.".
2018-12-02 10:03:47 +01:00
Julien Lepiller
a52461ded1
doc: Fix typo.
* doc/guix.texi (Networking Services): Fix double `the`.
2018-12-01 23:56:22 +01:00
Ludovic Courtès
b18f7234aa
guix build: Add '--with-commit'.
* guix/git.scm (<git-checkout>)[commit]: New field.
(git-checkout-compiler): Honor it.
* guix/scripts/build.scm (evaluate-git-replacement-specs): Add 'proc'
parameter and honor it.
(transform-package-source-branch)[replace]: New procedure.
Adjust 'evaluate-git-replacement-specs' accordingly.
(transform-package-source-commit): New procedure.
(%transformations, %transformation-options)
(show-transformation-options-help): Add 'with-commit'.
* tests/guix-build-branch.sh: Add test.
* doc/guix.texi (Package Transformation Options): Document it.
2018-11-30 17:03:04 +01:00
Ludovic Courtès
96915a448c
guix build: Add '--with-branch' transformation option.
* guix/scripts/build.scm (evaluate-git-replacement-specs)
(transform-package-source-branch): New procedures.
(%transformations, %transformation-options): Add 'with-branch'.
(show-transformation-options-help): Likewise.
* tests/guix-build-branch.sh: New file.
* Makefile.am (SH_TESTS): Add it.
* doc/guix.texi (Package Transformation Options): Document it.
2018-11-30 17:03:04 +01:00
Ludovic Courtès
8856f409d1
derivations: Add properties.
* guix/derivations.scm (derivation): Add #:properties parameter.
[user+system-env-vars]: Honor it.
(derivation-properties): New procedure.
(build-expression->derivation): Add #:properties and pass it to
'derivation'.
* guix/gexp.scm (gexp->derivation): Likewise.
* tests/derivations.scm ("derivation-properties"): New test.
* tests/gexp.scm ("gexp->derivation properties"): New test.
* doc/guix.texi (Derivations, G-Expressions): Adjust accordingly.
2018-11-28 10:39:58 +01:00
Ludovic Courtès
0c17f72070
services: openssh: Install OpenSSH in the system profile.
This ensures one can scp to or from the GuixSD machine that uses the
service.

* gnu/services/ssh.scm (openssh-service-type)[extensions]: Add
PROFILE-SERVICE-TYPE extension.
* gnu/system/examples/bare-bones.tmpl <packages>: Remove OPENSSH.
* doc/guix.texi (Using the Configuration System): Adjust accordingly.
2018-11-26 11:10:20 +01:00
Ludovic Courtès
bb640d6133
daemon: Ignore '--keep-failed' for TCP/IP clients.
* nix/nix-daemon/nix-daemon.cc (performOp) <wopSetOptions>: When
'isRemoteConnection' is true, set 'settings.keepFailed' to zero.
* doc/guix.texi (Common Build Options): Document this behavior.
2018-11-24 19:52:16 +01:00
Jan Nieuwenhuizen
3d3daf7fa1
doc: Update for bootstrap-mescc-tools change.
* doc/guix.texi (Reduced Binary Seed Bootstrap): Update for
bootstrap-mescc-tools change.
* doc/images/gcc-mesboot-bag-graph.dot: Regenerate.
2018-11-24 08:18:31 +01:00
Ludovic Courtès
e9926f80c6
build: Binary tarball now populates the "current-guix" profile.
* Makefile.am (guix-binary.%.tar.xz): Pass
'--profile-name=current-guix'.  Remove glibc and glibc-utf8-locales.
* doc/guix.texi (Binary Installation): Update accordingly.
* etc/guix-install.sh
* etc/guix-install.sh (sys_create_store, sys_enable_guix_daemon)
(sys_authorize_build_farms): Likewise.
* etc/guix-publish.conf.in, etc/guix-publish.service.in,
etc/guix-daemon.conf.in, etc/guix-daemon.service.in: Update file names
accordingly.
2018-11-23 15:42:01 +01:00
Ludovic Courtès
08f410834b
pack: Add '--profile-name'.
* guix/scripts/pack.scm (self-contained-tarball): Add #:profile-name and
honor it.
(squashfs-image, docker-image): Add #:profile-name.
(%default-options): Add 'profile-name'.
(%options, show-help): Add "--profile-name".
(guix-pack): Honor it.
* tests/guix-pack-localstatedir.sh: New file.
* Makefile.am (SH_TESTS): Add it.
* doc/guix.texi (Invoking guix pack): Document "--profile-name".
2018-11-23 15:42:01 +01:00
Ludovic Courtès
60e1c1099f
Update Guile-SQLite3 URL everywhere.
* README: Update Guile-SQLite3 URL.
* doc/guix.texi (Requirements): Likewise.
* guix/store/database.scm (sqlite-exec): Likewise.
* m4/guix.m4 (GUIX_CHECK_GUILE_SQLITE3): Likewise.
2018-11-23 15:42:00 +01:00
Oleg Pykhalov
85e9c4b919
describe: Add recutils format.
* guix/scripts/describe.scm (channel->recutils): New procedure.
(display-checkout-info, display-profile-info): Use this.
(%options): Add 'recutils' option.
* doc/guix.texi (Invoking guix describe): Document this.
2018-11-22 21:17:55 +03:00
Oleg Pykhalov
81a40ee0cb
describe: Add json format.
* guix/scripts/describe.scm (channel->json): New procedure.
(display-checkout-info, display-profile-info): Use this.
(%options): Add 'json' option.
* doc/guix.texi (Invoking guix describe): Document this.
2018-11-22 21:17:54 +03:00
Oleg Pykhalov
1255400faa
describe: Add profile option.
* guix/scripts/describe.scm (%options): Add profile option.
(show-help): Document this.
(display-checkout-info): Check for profile argument.
* doc/guix.texi (Invoking guix describe): Document this.
2018-11-21 14:41:13 +03:00
Alex Vong
df730f6757
build-system: Add 'clojure-build-system'.
* guix/build-system/clojure.scm, guix/build/clojure-build-system.scm: New
files.
* guix/build/clojure-utils.scm (@*, @@*): New macros.
(%source-dirs, %test-dirs, %compile-dir, %main-class, %omit-source?,
%aot-include, %aot-exclude, %tests?, %test-include, %test-exclude,
%clojure-regex): New variables.
(package-name->jar-names, canonicalize-relative-path, find-files*,
file-sans-extension, relative-path->clojure-lib-string, find-clojure-libs,
compiled-from?, include-list\exclude-list, eval-with-clojure, create-jar):
New procedures.
* Makefile.am (MODULES): Add them.
* doc/guix.texi (Build Systems): Document 'clojure-build-system'.
2018-11-19 12:07:44 +01:00
Ludovic Courtès
e34ae75dc1
linux-initrd: Return file-like objects instead of monadic values.
This is an incompatible change visible to users via the 'initrd' field
of 'operating-system'.  However, assuming the user's 'initrd' value
tail-calls to 'raw-initrd' or 'base-initrd', the switch to non-monadic
style is invisible.

* gnu/system/linux-initrd.scm (expression->initrd): Use 'computed-file'
instead of 'gexp->derivation'.
(raw-initrd, base-initrd): Adjust docstring to mention non-monadic
return.
* gnu/system/vm.scm (expression->derivation-in-linux-vm): Adjust
accordingly.
* gnu/system.scm (operating-system-directory-base-entries)
(operating-system-initrd-file)
(operating-system-boot-parameters): Adjust accordingly.
* doc/guix.texi (operating-system Reference)
(Initial RAM Disk): Update.
2018-11-18 23:37:44 +01:00
Ludovic Courtès
bca6396749
doc: Mention that ./pre-inst-env is generated.
Suggested by swedebugia <swedebugia@riseup.net>.

* doc/contributing.texi (Running Guix Before It Is Installed): Mention
that ./pre-inst-env is generated.
2018-11-16 23:16:05 +01:00
Ludovic Courtès
54ca1a375b
doc: Recommend pool.sks-keyservers.net.
pgp.mit.edu appears to be unreliable these days.

* doc/guix.texi (KEY-SERVER): New variable.
(Binary Installation, USB Stick and DVD Installation): Use it in 'gpg
--recv-keys' example.
2018-11-16 23:02:18 +01:00
Giovanni Biscuolo
c61f36f368
doc: Fix typo in connman config.
* doc/guix.texi (Networking Services): Fix typo in connman config
"disable-vpn?" parameter documentation, semantic is inverted.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2018-11-15 20:11:36 +02:00
Ludovic Courtès
d3f75179e5
services: nscd: Add 'invalidate' and 'statistics' actions.
* gnu/services/base.scm (nscd-action-procedure, nscd-actions): New
procedures.
(nscd-shepherd-service): Add 'modules' and 'actions' fields.
* gnu/tests/base.scm (run-basic-test)["nscd invalidate action"]
["nscd invalidate action, wrong table"]: New tests.
* doc/guix.texi (Services): Mention 'herd doc nscd action'.
(Base Services): Document the actions.
2018-11-13 14:59:45 +01:00
Laura Lazzati
9c001c07d4
doc: Fix typo.
* doc/guix.texi (Porting to a New Platform): Fix typo.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2018-11-11 23:17:04 +01:00
Clément Lassieur
be8dd4a5fe
services: dovecot: Allow to set 'process-limit'.
* doc/guix.texi (Mail Services): Update accordingly.
* gnu/services/mail.scm (service-configuration)[process-limit]: New field.
(dovecot-configuration)[services]: Set 'process-limit' to its correct default
value.
2018-11-10 19:12:18 +01:00
Clément Lassieur
8d9bb4b4d0
services: dovecot: Allow to set 'client-limit'.
* doc/guix.texi (Mail Services): Update accordingly.
* gnu/services/mail.scm (service-configuration)[client-limit]: New field.
(dovecot-configuration)[services]: Set 'client-limit' to its correct default
value.
2018-11-10 19:12:14 +01:00
Laura Lazzati
8fa9ace1d6
doc: Add index entries.
* doc/guix.texi: Added various cindex tags to assist readers.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-11-08 10:24:36 +01:00
Ludovic Courtès
dcb45127e0
services: cuirass: Add 'ttl' configuration field.
* gnu/services/cuirass.scm (<cuirass-configuration>)[ttl]: New field.
(cuirass-shepherd-service): Honor it.
2018-11-07 16:06:42 +01:00
Mathieu Othacehe
2d9dace8c2
services: kmscon: Add an auto-login option.
Add an auto-login option that behaves as the one of mingetty-service.

* gnu/services/base.scm (kmscon-configuration)[auto-login]: New field.
(kmscon-service-type): Pass it to kmscon command.
* doc/guix.texi (Base Services): Document it.
2018-11-07 18:21:42 +09:00
Ludovic Courtès
5f7dd092ca
pull: Make '--dry-run' behave as expected.
* guix/scripts/pull.scm (show-help): Document '--dry-run'.
(build-and-install): Add #:dry-run? parameter and honor it.
(guix-pull): Remove (assoc-ref opts 'dry-run?) condition.  Instead, pass
it as #:dry-run? to 'build-and-install'.
* doc/guix.texi (Invoking guix pull): Document '--dry-run'.  Move
'--verbose' to the bottom.
2018-11-06 00:04:11 +01:00
Ludovic Courtès
5e1e237a6d
doc: Fix typo in "Sound Services".
Reported by Jelle Licht <jlicht@fsfe.org>.

* doc/guix.texi (Sound Services): Fix typo.
2018-11-03 14:51:43 +01:00
Ludovic Courtès
a57ee7656b
doc: Remove misleading sentence about TMPDIR.
Reported by pelzflorian (Florian Pelz) <pelzflorian@pelzflorian.de>.
Fixes <https://bugs.gnu.org/33171>.

* doc/guix.texi (Invoking guix-daemon): Remove sentence that suggests
that TMPDIR leaks into the build environment.
2018-11-03 14:51:43 +01:00
Julien Lepiller
c356e831c0
doc: Fix typo.
* doc/guix.texi: Fix typo.
2018-11-03 14:31:35 +01:00
Julien Lepiller
92cc1fd8cb
doc: Fix typos.
* doc/guix.texi (Telephony Services): Fix typos.
2018-11-03 11:13:40 +01:00
Julien Lepiller
1e40e70bfe
doc: Add German translation.
* doc/contributing.de.texi: New file.
* doc/guix.de.texi: New file
* doc/local.mk (TRANSLATED_INFO): Add them.
(info_TEXINFOS): Add guix.de.texi.
* po/doc/guix-manual.de.po: New file.
* po/doc/local.mk (EXTRA_DIST): Add it.
* doc/guix.texi: Document the German translation.
2018-11-01 12:36:47 +01:00
Ludovic Courtès
63eb2b899b
Add 'guix processes'.
* guix/scripts/processes.scm, tests/processes.scm: New files.
* Makefile.am (MODULES): Add the former.
(SCM_TESTS): Add the latter.
* po/guix/POTFILES.in: Add guix/scripts/processes.scm.
* doc/guix.texi (Invoking guix processes): New node.
(Invoking guix-daemon): Reference it.
2018-10-29 00:13:38 +01:00
Florian Pelz
abc98e3be5
services: httpd: Allow using it with PHP.
* gnu/services/web.scm (httpd): Make existing httpd-module API public.
* doc/guix.texi (Apache HTTP Server): Document its usage with PHP-FPM.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2018-10-27 14:08:45 +01:00
Jan Nieuwenhuizen
a036e3c9ba
doc: Fix typo.
* doc/guix.texi (Reduced Binary Seed Bootstrap): Fix typo.
2018-10-23 23:19:06 +02:00
Jan Nieuwenhuizen
d0bb7ed61e
doc: Update Preparing to Use the Bootstrap Binaries.
* doc/guix.texi (Preparing to Use the Bootstrap Binaries): Mention
bootstrap-mes alongside bootstrap-gcc.
(Reducing the Set of Bootstrap Binaries): Mention the Reduced Binary Seed
bootstrap, MesCC-Tools and Mes.
2018-10-23 20:54:43 +02:00
Jan Nieuwenhuizen
e065823a59
doc: Move Reduced Binary Seed Bootstrap' into Bootstrapping'.
* doc/guix.texi (Reduced Binary Seed Bootstrap):
2018-10-21 23:26:21 +02:00
Jan Nieuwenhuizen
cf7658f7cb
Merge branch 'core-updates' into core-updates-next 2018-10-21 23:19:35 +02:00
Ludovic Courtès
64791eb7e1
services: ntp: Document 'ntp-service-type' and 'ntp-configuration'.
* gnu/services/networking.scm (<ntp-configuration>)[servers]: Add
default value.
(ntp-service-type)[default-value]: New field.
(ntp-service): Mark as deprecated.
* gnu/services/desktop.scm (%desktop-services): Use (service
ntp-service-type) instead of calling 'ntp-service'.
* doc/guix.texi (Networking Services): Document 'ntp-service-type' and
'ntp-configuration'.
2018-10-19 23:39:41 +02:00
Ludovic Courtès
39d7fdce45
services: dhcp-client: Deprecate 'dhcp-client-service' procedure.
* gnu/services/networking.scm (dhcp-client-service-type): Add default
value.
* gnu/system/examples/bare-bones.tmpl: Use (service
dhcp-client-service-type) instead of (dhcp-client-service).
* gnu/system/examples/beaglebone-black.tmpl: Likewise.
* gnu/tests/base.scm (%avahi-os): Likewise.
* gnu/tests/databases.scm (%memcached-os): Likewise.
(%mongodb-os): Likewise.
* gnu/tests/dict.scm (%dicod-os): Likewise.
* gnu/tests/mail.scm (%opensmtpd-os): Likewise.
(%exim-os): Likewise.
(%dovecot-os): Likewise.
* gnu/tests/messaging.scm (run-xmpp-test): Likewise.
(run-bitlbee-test): Likewise.
* gnu/tests/monitoring.scm (%prometheus-node-exporter-os): Likewise.
* gnu/tests/networking.scm (%inetd-os): Likewise.
(run-iptables-test): Likewise.
* gnu/tests/nfs.scm (%base-os): Likewise.
* gnu/tests/rsync.scm (%rsync-os): Likewise.
* gnu/tests/ssh.scm (run-ssh-test): Likewise.
* gnu/tests/version-control.scm (%cgit-os): Likewise.
(%git-http-os): Likewise.
(%gitolite-os): Likewise.
* gnu/tests/virtualization.scm (%libvirt-os): Likewise.
* gnu/tests/web.scm (%httpd-os): Likewise.
(%nginx-os): Likewise.
(%varnish-os): Likewise.
(%php-fpm-os): Likewise.
(%hpcguix-web-os): Likewise.
(%tailon-os): Likewise.
* tests/guix-system.sh: Likewise.
* doc/guix.texi (Networking Services): Document
'dhcp-client-service-type' and remove 'dhcp-client-service'.
2018-10-18 01:12:22 +02:00
Ludovic Courtès
03fd37b4eb
doc: Document 'guix-service-type'.
* doc/guix.texi (Base Services): Document 'guix-service-type'.  Remove
'guix-service'.
2018-10-18 01:12:22 +02:00
Marius Bakke
acce0a474c
services: wpa-supplicant: Extend to support configuration parameters.
This allows using WPA Supplicant "standalone" without an additional
network manager.  The default configuration is unchanged.

* gnu/services/networking.scm (<wpa-supplicant-configuration>): New record type.
(wpa-supplicant-shepherd-service): Pass configuration records to the daemon.
(wpa-supplicant-service-type): Adjust accordingly.
* doc/guix.texi (Networking Services): Document the new service type.
2018-10-17 20:34:37 +02:00
Ludovic Courtès
795d430d90
pull: Turn ~/.config/guix/current into a symlink to /var/guix/profiles.
This is more consistent with what 'guix package' does, more pleasant for
users (we no longer clobber ~/.config/guix), and more
cluster-friendly (since /var/guix/profiles is usually an NFS share
already.)

* guix/scripts/pull.scm (%current-profile, %user-profile-directory): New
variables.
(migrate-generations, ensure-default-profile): New procedures.
(guix-pull): Use %CURRENT-PROFILE by default.  Call
'ensure-default-profile'.
* doc/guix.texi (Invoking guix pull): Adjust 'guix package -p
~/.config/guix/current' example.
* guix/scripts.scm (warn-about-old-distro): Check %PROFILE-DIRECTORY
"/current-guix".
2018-10-11 18:29:11 +02:00
Pierre Neidhardt
4feb589bf4
doc: Add recommendations for good origin URLs.
* doc/contributing.texi (Submitting Patches): URL recommendations.
2018-10-10 18:06:08 +02:00
Ludovic Courtès
b33e191c86
guix build: '-f' accepts file-like objects.
* guix/scripts/build.scm (options->things-to-build)[validate-type]:
Check for 'file-like?'.
(options->derivations): Accept 'file-like?'.
* tests/guix-build.sh: Add a test with 'computed-file'.
* doc/guix.texi (Additional Build Options): Mention file-like objects.
2018-10-09 18:54:12 +02:00
Julien Lepiller
0d57a50af2
gnu: postgresql: Add extension-packages.
* gnu/services/databases.scm (postgresql-configuration): Add
extension-packages.
(postgresql-shepherd-service): New key #:extension-packages.
* doc/guix.texi (Database Services): Document it.
2018-10-04 22:30:23 +02:00
Simon Josefsson
f671c59555
doc: Add static network example.
* doc/guix.texi (Networking Services): Add example for static-networking-service.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-10-02 14:53:39 +02:00
Christopher Baines
f8e710684e
services: Add Gitolite.
* gnu/services/version-control.scm (<gitolite-configuration>,
<gitolite-rc-file>): New record types.
(gitolite-accounts, gitolite-activation): New procedures.
(gitolite-service-type): New variables.
* gnu/tests/version-control.scm (%gitolite-test-admin-keypair, %gitolite-os,
%test-gitolite): New variables.
(run-gitolite-test): New procedure.
* doc/guix.texi (Version Control): Document the gitolite service.
2018-10-02 08:11:17 +01:00
Mark H Weaver
17bea1803c
Revert "services: Add Gitolite."
This reverts commit 258a6d944e.
2018-09-29 21:18:45 -04:00
Christopher Baines
258a6d944e
services: Add Gitolite.
* gnu/services/version-control.scm (<gitolite-configuration>,
<gitolite-rc-file>): New record types.
(gitolite-accounts, gitolite-activation): New procedures.
(gitolite-service-type): New variables.
* gnu/tests/version-control.scm (%gitolite-test-admin-keypair, %gitolite-os,
%test-gitolite): New variables.
(run-gitolite-test): New procedure.
* doc/guix.texi (Version Control): Document the gitolite service.
2018-09-28 21:00:18 +01:00
Carlo Zancanaro
4245ddcbc9
guix system: Load all services on reconfigure, not just stopped ones.
This uses the 'replacement' service slot introduced in the Shepherd
version 0.5.0.

* gnu/services/shepherd.scm (shepherd-service-upgrade): Return a list of
  services that need to be restarted to complete their upgrade.
* guix/scripts/system.scm (call-with-service-upgrade-info): Rename an internal
  variable to reflect the change to shepherd-service-upgrade.
  (upgrade-shepherd-services): Call 'load-services/safe' instead of
  'load-services'.  Print a message about services that need to be
  manually restarted.
* gnu/services/herd.scm (load-services/safe): New procedure.
* doc/guix.texi (Invoking guix system): Document the new behaviour.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2018-09-26 23:40:36 +02:00
Marius Bakke
3b97a1779f
services: Add Varnish service.
* gnu/services/web.scm (<varnish-configuration>): New record type.
(%varnish-accounts, %varnish-service-type): New variables.
(varnish-shepherd-service): New procedure.
* gnu/tests/web.scm (%varnish-vcl, %varnish-os): New variables.
(%test-varnish): New test.
* doc/guix.texi (Web Services): Document it.
2018-09-26 00:33:01 +02:00
Jan Nieuwenhuizen
eb4434598c
bootstrap: Reduced Binary Seed bootstrap for x86_64 too.
* gnu/packages/bootstrap.scm (%bootstrap-inputs): Replace %bootstrap-libc,
%bootstrap-gcc, and %bootstrap-binutils with Mes seeds for x86_64 too.
* gnu/packages/commencement.scm (tcc-boot0, tcc-boot, gcc-mesboot1,
gcc-mesboot1-wrapper, m4-mesboot, %bootstrap-inputs+toolchain,
libstdc++-boot0, gcc-boot0, bison-boot0): For x86_64-linux, use i686-linux
glibc-dynamic-linker and Mes bootstrap settings.
(gcc-boot0-intermediate-wrapped): New variable, extract from
static-bash-for-glibc.
(static-bash-for-glibc): Use it.
(gcc-final): Copy gmp&co phase from gcc-boot0, inherit other arguments
from gcc; avoid i686-linux impersonation from gcc-boot0.
* doc/guix.texi (Bootstrapping, Reduced Binary Seed Bootstrap): Note
x86_64-linux also as Reduced Binary Seed bootstrap.
2018-09-23 09:46:26 +02:00
Jan Nieuwenhuizen
a243722c5b
doc: Describe the Reduced Binary Seed bootstrap.
* doc/guix.texi (Reduced Binary Seed Bootstrap): New node.
* doc/images/gcc-mesboot-bag-graph.dot: New file.
* doc/local.mk (DOT_FILES): Add it.
2018-09-23 09:46:26 +02:00
Ludovic Courtès
92a9f14b9d
doc: Add section about inferiors.
* doc/guix.texi (Inferiors): New node.
(Channels): Add xref to "Inferiors".
2018-09-21 17:04:38 +02:00
Arun Isaac
9926b8f809
gnu: services: Add iptables service.
* gnu/services/networking.scm (<iptables-configuration>): New record type.
(iptables-service-type): New variable.
* gnu/tests/networking.scm (run-iptables-test): New procedure.
(%test-iptables): New variable.
* doc/guix.texi (Networking Services): Document it.
2018-09-20 13:09:55 +05:30
Ludovic Courtès
b9e1fddfd8
gnupg: Use 'gpgv' and keybox files; adjust 'guix refresh' accordingly.
* guix/gnupg.scm (%gpgv-command, current-keyring): New variables
(gnupg-verify): Add optional 'keyring' parameter.  Use 'gpgv' instead of
'gpg' and pass it '--keyring'.
(gnupg-receive-keys): Add optional 'keyring' parameter and honor it.
(gnupg-verify*): Add #:keyring and honor it.
* guix/scripts/refresh.scm (%options, show-help): Add '--keyring'.
(guix-refresh): Parameterize CURRENT-KEYRING.
* doc/guix.texi (Invoking guix refresh): Document '--keyring' and the
keybox format.
2018-09-16 23:00:44 +02:00
Ludovic Courtès
ebbfc59c21
graph: Add '--system'.
* guix/scripts/graph.scm (%options, show-help): Add '--system'.
(%default-options): Add 'system'.
(guix-graph): Pass #:system to 'run-with-store'.
2018-09-16 23:00:44 +02:00
Clément Lassieur
88bfabf111
hydra: Add support for manifests.
* build-aux/hydra/gnu-system.scm (arguments->manifests, manifests->packages):
New procedures.
(hydra-jobs): Add a "manifests" subset.
* doc/guix.texi (Continuous Integration): Update accordingly.
2018-09-13 10:15:04 +02:00
Ludovic Courtès
bd7470185b
Add 'guix describe'.
* guix/scripts/describe.scm: New file.
* Makefile.am (MODULES): Add it.
(SH_TESTS): Add tests/guix-describe.sh.
* po/guix/POTFILES.in: Add it.
* guix/scripts/pull.scm (display-profile-content): Export.
* guix/describe.scm (current-profile, current-profile-entries): Export.
* tests/guix-describe.sh: New file.
* doc/guix.texi (Features): Mention 'guix pull' and provenance tracking.
(Invoking guix pull): Link to 'guix describe'.
(Channels): Likewise.
(Invoking guix describe): New node.
2018-09-07 11:40:22 +02:00
Ludovic Courtès
ee94cfeb99
pull: Add '--profile'.
* guix/scripts/pull.scm (show-help, %options): Add '--profile'.
(build-and-install): Change 'config-dir' argument to 'profile'.
(guix-pull): Honor '--profile'.
* doc/guix.texi (Invoking guix pull): Document it.
2018-09-07 11:40:18 +02:00
Ludovic Courtès
fd3a64335d
doc: Update hpcguix-web configuration documentation.
* doc/guix.texi (Web Services): Document 'channels' and
'package-list-expiration'.
2018-09-06 13:53:04 +02:00
Ludovic Courtès
7df945656c
services: hpcguix-web: Set SSL_CERT_DIR.
Previously Git pulls over HTTPS would fail with:

  guix/git.scm:132:7: In procedure update-cached-checkout:
  Throw to key `git-error' with args `(#<<git-error> code: -17 message: "the SSL certificate is invalid" class: 16>)'.

* gnu/services/web.scm (hpcguix-web-shepherd-service): Pass
"SSL_CERT_DIR=/etc/ssl/certs".
* doc/guix.texi (Web Services): Mention certificates.
2018-09-06 13:49:06 +02:00
Ludovic Courtès
ca71942445
Switch to Guile-Gcrypt.
This removes (guix hash) and (guix pk-crypto), which now live as part of
Guile-Gcrypt (version 0.1.0.)

* guix/gcrypt.scm, guix/hash.scm, guix/pk-crypto.scm,
tests/hash.scm, tests/pk-crypto.scm: Remove.
* configure.ac: Test for Guile-Gcrypt.  Remove LIBGCRYPT and
LIBGCRYPT_LIBDIR assignments.
* m4/guix.m4 (GUIX_ASSERT_LIBGCRYPT_USABLE): Remove.
* README: Add Guile-Gcrypt to the dependencies; move libgcrypt as
"required unless --disable-daemon".
* doc/guix.texi (Requirements): Likewise.
* gnu/packages/bash.scm, guix/derivations.scm, guix/docker.scm,
guix/git.scm, guix/http-client.scm, guix/import/cpan.scm,
guix/import/cran.scm, guix/import/crate.scm, guix/import/elpa.scm,
guix/import/gnu.scm, guix/import/hackage.scm,
guix/import/texlive.scm, guix/import/utils.scm, guix/nar.scm,
guix/pki.scm, guix/scripts/archive.scm,
guix/scripts/authenticate.scm, guix/scripts/download.scm,
guix/scripts/hash.scm, guix/scripts/pack.scm,
guix/scripts/publish.scm, guix/scripts/refresh.scm,
guix/scripts/substitute.scm, guix/store.scm,
guix/store/deduplication.scm, guix/tests.scm, tests/base32.scm,
tests/builders.scm, tests/challenge.scm, tests/cpan.scm,
tests/crate.scm, tests/derivations.scm, tests/gem.scm,
tests/nar.scm, tests/opam.scm, tests/pki.scm,
tests/publish.scm, tests/pypi.scm, tests/store-deduplication.scm,
tests/store.scm, tests/substitute.scm: Adjust imports.
* gnu/system/vm.scm: Likewise.
(guile-sqlite3&co): Rename to...
(gcrypt-sqlite3&co): ... this.  Add GUILE-GCRYPT.
(expression->derivation-in-linux-vm)[config]: Remove.
(iso9660-image)[config]: Remove.
(qemu-image)[config]: Remove.
(system-docker-image)[config]: Remove.
* guix/scripts/pack.scm: Adjust imports.
(guile-sqlite3&co): Rename to...
(gcrypt-sqlite3&co): ... this.  Add GUILE-GCRYPT.
(self-contained-tarball)[build]: Call 'make-config.scm' without
 #:libgcrypt argument.
(squashfs-image)[libgcrypt]: Remove.
[build]: Call 'make-config.scm' without #:libgcrypt.
(docker-image)[config, json]: Remove.
[build]: Add GUILE-GCRYPT to the extensions  Remove (guix config) from
the imported modules.
* guix/self.scm (specification->package): Remove "libgcrypt", add
"guile-gcrypt".
(compiled-guix): Remove #:libgcrypt.
[guile-gcrypt]: New variable.
[dependencies]: Add it.
[*core-modules*]: Remove #:libgcrypt from 'make-config.scm' call.
Add #:extensions.
[*config*]: Remove #:libgcrypt from 'make-config.scm' call.
(%dependency-variables): Remove %libgcrypt.
(make-config.scm): Remove #:libgcrypt.
* build-aux/build-self.scm (guile-gcrypt): New variable.
(make-config.scm): Remove #:libgcrypt.
(build-program)[fake-gcrypt-hash]: New variable.
Add (gcrypt hash) to the imported modules.  Adjust load path
assignments.
* gnu/packages/package-management.scm (guix)[propagated-inputs]: Add
GUILE-GCRYPT.
[arguments]: In 'wrap-program' phase, add GUILE-GCRYPT to the search
path.
2018-09-04 17:25:11 +02:00
Tobias Geerinckx-Rice
cfcfc6ab62
Fix some typos.
* doc/guix.texi (Sound Services, DNS Services): Fix typos.
* gnu/packages/cpp.scm (json-modern-cxx)[description]: Likewise.
* gnu/packages/emacs.scm (emacs-fancy-narrow)[synopsis, description]:
Likewise. Edit & mark up while we're here.
* gnu/packages/mail.scm (alot)[synopsis, description]: Ditto.
2018-09-03 18:21:43 +02:00
Ludovic Courtès
0d39a3b989
Add (guix channels) and use it in (guix scripts pull).
* guix/channels.scm: New file.
* Makefile.am (MODULES): Add it.
* guix/scripts/pull.scm: Use it.
(%default-options): Remove 'repository-url' and 'ref'.
(show-help, %options): Add '--channels'.
(%self-build-file, %pull-version, build-from-source)
(whole-package-for-legacy, derivation->manifest-entry): Remove.  These
now exist in a similar form in (guix channels).
(build-and-install): Change 'source' to 'instances'.  Remove #:url,
 #:branch, and #:commit.  Rewrite using 'channel-instances->manifest'.
(channel-list): New procedure.
(guix-pull): Parameterize %REPOSITORY-CACHE-DIRECTORY.  Call
'honor-lets-encrypt-certificates!' unconditionally.  Load
~/.config/guix/channels.scm.  Rewrite to use (guix channels).
[use-le-certs?]: Remove.
* po/guix/POTFILES.in: Add (guix channels).
* doc/guix.texi (Invoking guix pull): Group the description of '--url',
'--commit', and '--branch'.  Remove mention of 'GUIX_PULL_URL'.  Add
references to "Channels".  Document '--channels'.
(Channels): New node.
(Defining Packages): Link to "Channels" instead of "Package Modules".
(Invoking guix edit): Link to "Package Modules" instead of "Defining
Packages".
(Package Modules): Document both GUIX_PACKAGE_PATH and channels.
2018-09-02 16:51:40 +02:00
Ricardo Wurmus
ac906cb7bb
import: pypi: Support recursive importing.
* guix/import/pypi.scm (guess-requirements): Use upstream names.
(compute-inputs): Return the upstream dependency names as an additional value.
(make-pypi-sexp): Likewise.
(pypi->guix-package): Memoize it.
(pypi-recursive-import): New procedure.
* guix/scripts/import/pypi.scm (show-help, %options): Accept "recursive"
option.
(guix-import-pypi): Use pypi-recursive-import.
* doc/guix.texi (Invoking guix import): Document it.
2018-08-30 15:22:22 +02:00
Ricardo Wurmus
a3ece51a29
import: stackage: Support recursive importing.
* guix/import/hackage.scm (hackage-name->package-name): Export procedure.
* guix/import/stackage.scm (lts-info-packages-lts-info): Fix match expression.
(stackage-recursive-import): New procedure.
(stackage->guix-package): Memoize results.
* guix/scripts/import/stackage.scm (show-help, %options,
guix-import-stackage): Support recursive importing.
* doc/guix.texi (Invoking guix import): Document option.
2018-08-30 15:22:06 +02:00
Oleg Pykhalov
8490a8346b
services: Add ddclient service.
* gnu/services/dns.scm (ddclient-configuration, ddclient-service-type): New
variables.
(uglify-field-name, serialize-field, serialize-boolean, serialize-integer,
serialize-string, serialize-list, serialize-extra-options,
ddclient-activation, ddclient-shepherd-service,
generate-ddclient-documentation): New procedures.
* doc/guix.texi (DNS Services): Document it.
2018-08-30 01:19:47 +03:00
Ludovic Courtès
6772ed1e07
services: openssh: Add 'log-level' field.
* gnu/services/ssh.scm (<openssh-configuration>)[log-level]: New field.
(openssh-config-file): Honor it.
* doc/guix.texi (Networking Services): Document it.
2018-08-28 12:35:02 +02:00
Chris Marusich
3bcb305b98
services: tor: Make it easier to use UNIX sockets.
* doc/guix.texi (Networking Services): Document it, and mention that
tor-service is deprecated.
* gnu/services/networking.scm (<tor-configuration>) <socks-socket-type>:
New field.
(tor-configuration->torrc): When socks-socket-type is 'unix, set
SocksPort to UNIX domain socket /var/run/tor/socks-sock and set
UnixSocksGroupWritable to 1.
* gnu/tests/networking.scm (%tor-os/unix-socks-socket): Instead of using
a custom config file, just set socks-socket-type to 'unix.
2018-08-28 00:25:05 -07:00
Julien Lepiller
1d8d69c863
nls: Update 'fr' translation. 2018-08-26 12:43:49 +02:00
Ludovic Courtès
fa4ebd2f08
doc: Remove extra space before colon in menu entries.
Fixes <https://bugs.gnu.org/32473>.
Reported by HiPhish <hiphish@posteo.de>.

* doc/guix.texi (Top, Defining Packages): In menu, remove extra space
before "::".
2018-08-20 12:20:45 +02:00
Julien Lepiller
9c33229452
doc: Fix typo.
* doc/guix.texi (Using the Configuration System): Add missing 'you' and
fix word order.
2018-08-16 11:13:57 +02:00
Arun Isaac
de30205ba0
gnu: services: Add pcscd service.
* gnu/services/security-token.scm: New file.
* gnu/tests/security-token.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Register new files.
* doc/guix.texi (Miscellaneous Services): Document the service.
2018-08-16 02:46:27 +05:30
Julien Lepiller
3480d6f721
doc: Replace reference to deprecated title field.
* doc/guix.texi (Proceeding with the Installation): Use file-system-label
instead of the title field.
2018-08-15 23:02:12 +02:00
Julien Lepiller
336e4d6195
doc: Fix typo.
* doc/guix.texi (Preparing for Installation): Add missing 'to'.
2018-08-15 21:49:49 +02:00
Julien Lepiller
524756d127
nls: Update 'fr' translation. 2018-08-15 18:54:29 +02:00
Clément Lassieur
efb22b47db
services: cgit: Disable repo booleans having a global counterpart.
Otherwise the global counterpart is never taken into account.

* doc/guix.texi (Version Control Services): Update accordingly.
* gnu/services/cgit.scm (repo-boolean?, serialize-repo-boolean): Use the
DEFINE-MAYBE macro to allow for the 'disabled value.
(repository-cgit-configuration)[enable-commit-graph?, enable-log-filecount?,
enable-log-linecount?, enable-remote-branches?, enable-subject-links?,
enable-html-serving?]: Change default value to 'disabled.
2018-08-13 00:29:47 +02:00
Ricardo Wurmus
a928596162
import: hackage: Support recursive importing.
* guix/import/hackage.scm (hackage-recursive-import): New procedure.
(hackage-module->sexp): Return dependencies alongside dependencies.
(hackage->guix-package): Memoize results.
* guix/scripts/import/hackage.scm (show-help, %options, guix-import-hackage):
Support recursive importing.
* doc/guix.texi (Invoking guix import): Document option.
2018-08-11 18:53:46 +02:00
Marius Bakke
52ee4d85c2
doc: Fix syntax error.
* doc/guix.texi (Networking Services): Escape newline between keyword
arguments.
2018-08-09 21:19:46 +02:00
Clément Lassieur
4bfa256ca1
doc: Fix Cuirass URL.
* doc/guix.texi (Continuous Integration): Fix Cuirass URL.
2018-07-30 21:47:13 +02:00
Eric Brown
5b68239072
services: openssh: Add forwarding options.
* gnu/services/ssh.scm (<openssh-configuration>)[allow-agent-forwarding?]
[allow-tcp-forwarding?, gateway-ports?]: New fields.
(openssh-config-file): Handle them.
* doc/guix.texi (Networking Services): Adjust accordingly.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-07-29 18:50:28 +02:00
Chris Marusich
346a632144
doc: Clarify some of guix-daemon's GC options.
Reported by Pierre Neidhardt <ambrevar@gmail.com>.

* doc/guix.texi (Invoking guix-daemon): Fix an incorrect statement
regarding --gc-keep-outputs.  Add a little to the description of this
option and --gc-keep-derivations.
2018-07-28 03:00:16 -07:00
Efraim Flashner
8e1895964f
gnu: Add hplip-minimal.
* gnu/packages/cups.scm (hplip-minimal): New variable.
* gnu/packages/scanner.scm (sane-backends)[inputs]: Replace hplip with
hplip-minimal.
* doc/guix.texi (Printing Services): Change example code to use
hplip-minimal in place of hplip. Add note explaining when use hplip.
2018-07-25 11:52:59 +03:00
Ludovic Courtès
2a3b1b3235
build-system: Add 'guile-build-system'.
* guix/build-system/guile.scm, guix/build/guile-build-system.scm: New
files.
* Makefile.am (MODULES): Add them.
* doc/guix.texi (Build Systems): Document 'guile-build-system'.
2018-07-23 12:25:31 +02:00
Clément Lassieur
701cbfd15d
doc: Remove the documentation about Cuirass' load-path.
* doc/guix.texi (Continuous Integration): Remove the load-path field.
2018-07-17 00:00:27 +02:00
Ludovic Courtès
dc733e6a12
pull: Use (guix inferior) to display new and upgraded packages.
* guix/scripts/pull.scm (display-profile-content): Call
'display-generation'.
(display-new/upgraded-packages, display-profile-content-diff): New
procedures.
(process-query)[list-generation]: Remove.
[list-generations]: New procedure.
Adjust accordingly.
* doc/guix.texi (Invoking guix pull): Update example of '-l'.
2018-07-13 17:28:40 +02:00
Ludovic Courtès
2ca299caf6
Add (guix inferior) and (guix scripts repl).
* guix/inferior.scm, guix/scripts/repl.scm, tests/inferior.scm: New
files.
* Makefile.am (MODULES): Add 'guix/scripts/repl.scm' and
'guix/inferior.scm'.
(SCM_TESTS): Add 'tests/inferior.scm'.
* doc/guix.texi (Invoking guix repl): New node.
2018-07-13 17:28:39 +02:00
Arun Isaac
9286c29504
etc: snippets: Add guix-commit-message-use-https-home-page.
* etc/snippets/text-mode/guix-commit-message-use-https-home-page: New file.
* doc/contributing.texi (The Perfect Setup): Document new snippet.
2018-07-13 12:45:11 +05:30
Ludovic Courtès
147c5aa5d4
services: mcron: Add 'schedule' action.
Inspired by
<https://lists.gnu.org/archive/html/help-guix/2018-07/msg00035.html>.

* gnu/services/mcron.scm (shepherd-schedule-action): New procedure.
(mcron-shepherd-services): Add 'actions' field.
* gnu/tests/base.scm (run-mcron-test)["schedule action"]: New test.
* doc/guix.texi (Scheduled Job Execution): Mention 'herd schedule'.
2018-07-13 00:08:55 +02:00
Ludovic Courtès
701383081a
services: shepherd: Support custom actions.
* gnu/services/shepherd.scm (<shepherd-service>)[actions]: New field.
(<shepherd-action>): New record type.
(shepherd-service-file): Pass #:actions to 'make'.
* doc/guix.texi (Shepherd Services): Document custom actions.
2018-07-13 00:08:54 +02:00
Jan Nieuwenhuizen
e8e1f295f1
gexp: Allow bytevector as content of `plain-file'.
This allows for using a package source directly from git, doing something like

    (define (command->bytevector command)
      (let ((port (apply open-pipe* OPEN_READ command)))
        (let ((output (get-bytevector-all port)))
          (close-port port)
          output)))

    (define-public hello-git
      (package
        (name "hello")
        (version "git")
        (source (let* ((commit "stable-2.0")
                       (content (command->bytevector
                                 `("git" "archive" "--format" "tar" "--prefix"
                                   ,(string-append commit "/") ,commit)))
                       (file-name (string-append "hello-" commit)))
                  (plain-file file-name content)))
        ...
        ))

* guix/gexp.scm (<plain-file>): Also allow bytevector content.
(plain-file-compiler): Handle bytevector content.
* doc/guix.texi (G-Expressions): Describe plain-file now also taking
bytevectors.
2018-07-12 06:22:04 +02:00
Jan Nieuwenhuizen
f3a422511f
store: Add `binary-file'.
* guix/store.scm (binary-file): New function.
* doc/guix.texi (The Store Monad): Describe binary-file.
2018-07-12 06:22:04 +02:00
Oleg Pykhalov
88388766f7
import: gem: Add recursive import.
* doc/guix.texi (Invoking guix import): Document gem recursive import.
* guix/import/gem.scm (gem->guix-package): Return package and dependencies
values.
(gem-recursive-import): New procedure.
* guix/scripts/import/gem.scm (show-help, %options): Add recursive option.
(guix-import-gem): Use 'gem-recursive-import'.
* tests/gem.scm (test-json): Rename to 'test-foo-json'.
("gem->guix-package"): Use 'test-foo-json'.
(test-bar-json, test-bundler-json): New variables.
("gem-recursive-import"): New test.
2018-07-11 07:08:54 +03:00
Julien Lepiller
b24443bff9
guix: Add opam importer.
* guix/scripts/import.scm (importers): Add opam.
* guix/scripts/import/opam.scm: New file.
* guix/import/opam.scm: New file.
* tests/opam.scm: New file.
* Makefile.am: Add them.
* doc/guix.texi (Invoking guix import): Document it.
2018-07-10 10:11:01 +02:00
Ludovic Courtès
af7914a1f1
doc: Use https://alpha.gnu.org instead of FTP.
* doc/guix.texi (Binary Installation)
(USB Stick and DVD Installation, Running GuixSD in a VM): Use
"https://alpha.gnu.org" instead of the now deprecated FTP URLs.
2018-07-09 16:49:19 +02:00
EuAndreh
cf0d926202
doc: Fix FTP link in documentation.
The current incorrect link at: https://www.gnu.org/software/guix/manual/en/guix.html#Running-GuixSD-in-a-VM.

I looked for other instances of this mistake in the docs, but I could't
find any.

* doc/guix.texi: fix link to GuixSD VM image in FTP server.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-07-09 16:49:16 +02:00
Ricardo Wurmus
9c2427abe7
doc: Fix syntax error and remove trailing whitespace.
This is a follow-up to commit a33652ee33.

* doc/guix.texi (Prometheus Node Exporter Service): Remove trailing whitespace
and change "defvr" to "defvar".
2018-07-09 13:30:32 +02:00
Gábor Boskovits
a33652ee33
services: Add prometheus-node-exporter-service-type.
* gnu/services/monitoring.scm (prometheus-node-exporter-service-type):
New variable.
(<prometheus-node-exporter-configuration>): New record type.
(prometheus-node-exporter-shepherd-service): New procedure.
* gnu/doc/guix.texi (Monitoring Services): Document it.
* gnu/tests/monitoring.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add test module.
2018-07-09 10:39:06 +02:00
Oleg Pykhalov
c2587d3201
doc: Fix typo.
* doc/guix.texi (Preparing for Installation): Fix ‘the’ typo.
2018-07-07 11:45:55 +03:00
Ludovic Courtès
c2808d4c67
Merge branch 'version-0.15.0' 2018-07-06 17:42:25 +02:00
Ludovic Courtès
c35f77c5a0
doc: Update URL of the Emacs-Guix manual.
* doc/htmlxref.cnf (EMACS_GUIX): Update URL.
2018-07-05 22:16:10 +02:00
Ludovic Courtès
56b4dabc2b
doc: Mention translations of the manual.
* doc/guix.texi (Top): Add note about l10n.
* doc/htmlxref.cnf: Add "guix.fr".
2018-07-05 22:13:23 +02:00
Ludovic Courtès
63899cc774
doc: Update package count.
* doc/guix.texi (Limitations): Update number.
2018-07-05 11:54:23 +02:00
Ludovic Courtès
900e6d4051
doc: Mention ARM and AArch64 bootloaders.
* doc/guix.texi (Bootloader Configuration): Mention ARM and AArch64.
Add missing uses of @code.
2018-07-05 11:53:36 +02:00
Ludovic Courtès
fc0e663f78
doc: Improve UEFI/BIOS bootloader documentation.
Partly fixes <https://bugs.gnu.org/30312>.

* doc/guix.texi (Preparing for Installation): Add note on how to choose
between UEFI and BIOS.
(Using the Configuration System)[Bootloader]: New subsubsection.
(Bootloader Configuration): Expound on the bootloader type and target.
* gnu/system/examples/desktop.tmpl: Switch to UEFI.
* gnu/system/examples/bare-bones.tmpl: Explicitly mention "legacy" and
"BIOS" in the comments.
2018-07-05 11:44:46 +02:00
Tobias Geerinckx-Rice
142869f80f
Don't force colour in aliases.
* gnu/system/shadow.scm (default-skeletons): Substitute ‘--color=auto’
for ‘--color’ (which implies ‘=always’) in aliases.
* doc/guix.texi (G-Expressions): Also adjust examples as that makes
more sense.
2018-07-05 02:35:03 +02:00
Ludovic Courtès
0207768fc9
doc: Mention the build environment.
* doc/contributing.texi (Running Guix Before It Is Installed): Add a
note about having the dependencies available.
2018-07-04 14:36:07 +02:00
Ludovic Courtès
fc6cbb311c
doc: Specify Guile-SQLite3 minimum version.
* doc/guix.texi (Requirements): Specify the minimum guile-sqlite3
version.
* README (Requirements): Likewise.
2018-06-27 16:58:59 +02:00
Tobias Geerinckx-Rice
a15e4b160a
doc: Private key passphrases are not supported.
* doc/guix.texi (Daemon Offload Setup): Note this.
2018-06-27 12:46:27 +02:00
Nicolas Goaziou
69390e29db
doc: Minor improvements to Power Management Services.
* doc/guix.texi (Top): Improve summary.
(Power Management Services): Use proper titlecase for section.  Add index
entries and sub-sections.
2018-06-26 22:46:07 +02:00
Marius Bakke
671dd8d6e6
doc: Use a consistent partitioning scheme.
* doc/guix.texi (Preparing for Installation): Consistently refer to the ESP as
/dev/sda1; root file system as /dev/sda2; and swap as /dev/sda3.
2018-06-26 17:27:40 +02:00
宋文武
6d91a46992
doc: Add an example of ~/.asoundrc file for ALSA configuration.
* doc/guix.texi (Sound Services): Improve it and add an example of ~/.asoundrc
file.
2018-06-25 23:29:47 +08:00
Oleg Pykhalov
1e3861eb00
services: alsa-service-type: Fix the loading of 'pulse' plugin.
Fixes <https://bugs.gnu.org/31591>.

* gnu/services/sound.scm (<alsa-configuration>)[alsa-plugins]: New field.
(alsa-config-file): Use 'pcm_type.pulse' and 'ctl_type.pulse' to specify file
paths to the 'pulse' plugin.
* doc/guix.texi (Sound Services): Document this.

Co-authored-by: 宋文武 <iyzsong@member.fsf.org>
2018-06-25 23:29:46 +08:00
Julien Lepiller
2cf2c77884
nls: Update 'fr' translation. 2018-06-23 16:23:50 +02:00
Danny Milosavljevic
7f93bbd5aa
services: Add fingerprint identification service.
* gnu/services/authentication.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi (Miscellaneous Services): Document it.
2018-06-23 00:14:27 +02:00
Marius Bakke
38ab778fbd
doc: Clarify when branches are "frozen".
* doc/contributing.texi (Submitting Patches): Provide a link to Hydra.  Add
section about freezing branches.
2018-06-16 21:35:24 +02:00
Danny Milosavljevic
4ce4fc5010
system: Add os-with-u-boot.
* gnu/system/install.scm (os-with-u-boot): New procedure.
* gnu/packages/bootloaders.scm (make-u-boot-package): Export.
* doc/guix.texi (Building the Installation Image for ARM Boards): New
subsection.
2018-06-15 14:16:37 +02:00
Ludovic Courtès
c5a2e1ffcb
build: Require Guile-SQLite3.
The next commits make (sqlite3) an indirect dependency of (gnu build
install), which is itself used by (guix scripts system), hence this new
requirement.

* configure.ac: Error out when $guix_cv_have_recent_guile_sqlite3 is
false.  Remove HAVE_GUILE_SQLITE3 Automake conditional.
* Makefile.am (MODULES, SCM_TESTS): Remove HAVE_GUILE_SQLITE3 conditions.
* doc/guix.texi (Requirements): Add Guile-SQLite3.
* README: Ditto.
* gnu/packages/package-management.scm (guix)[propagated-inputs]: Add
GUILE-SQLITE3.
[arguments]: In 'wrap-program' phase, take guile-sqlite3 into account.
2018-06-14 11:16:58 +02:00
Ludovic Courtès
e2f8be0664
pull: Add '--list-generations'.
* guix/scripts/pull.scm (show-help, %options): Add '--list-generations'.
(display-profile-content, process-query): New procedures.
(guix-pull): Honor '--list-generations'.
2018-06-13 23:41:21 +02:00
Christopher Baines
25e071ead9
services: nginx: Support extra content in the http block.
This helpful when adding content to the nginx configuration file, which isn't
supported by the record type used for the configuration.  For example, like
adding proxy_cache_path configuration.

* gnu/packages/web.scm (<nginx-configuration>): Add new extra-content field.
  (nginx-configuration-extra-content): New field accessor.
  (default-nginx-config): Add support for the extra-content field.
* doc/guix.texi (NGINX): Document the new extra-content field.
2018-06-12 21:18:10 +01:00
Ludovic Courtès
75e24d7b0e
pull: Install the new Guix in a profile.
* guix/scripts/pull.scm (%pull-version): New variable.
(build-from-source): Pass #:pull-version to BUILD.
(whole-package-for-legacy, derivation->manifest-entry): New procedure.
(build-and-install): Rewrite in terms of 'build-and-use-profile'.
* guix/scripts/system.scm (maybe-suggest-running-guix-pull)[latest]:
Switch to "/current".
* scripts/guix.in (augment-load-paths!): Remove use of
~/.config/guix/latest.
* build-aux/compile-as-derivation.scm: Replace "/guix/latest/" with
"/current/share/guile/site/X.Y"
* guix/scripts.scm (warn-about-old-distro)[age]: Check "/current"
instead of "/latest".
* doc/guix.texi (Invoking guix pull): Document it.
* doc/contributing.texi (Running Guix Before It Is Installed): Remove
footnote about abusing ~/.config/guix/latest.
2018-06-09 12:02:27 +02:00
Julien Lepiller
7f3f72b292
nls: Update 'fr' translation. 2018-06-08 20:38:41 +02:00
Julien Lepiller
136a1e8b57
doc: Document xorg keymap configuration.
* doc/guix.texi (Xorg display): Add an example xorg keymap configuration.
2018-06-08 20:38:18 +02:00
宋文武
c061eb587c
services: dnsmasq: Use 'negative-cache?' instead of 'no-negcache?'.
The 'no-negcache?' option is mapped to the '--no-negcache' command-line
argument directly, but we're in the scheme world, where the general guideline
is to avoid double-negations in identifiers.

* gnu/services/dns.scm <dnsmasq-configuration>: Replace the 'no-negcache?'
field with 'negative-cache?'.
* doc/guix.texi (DNS Services)[Dnsmasq Service]: Adjust accordingly.
2018-06-08 23:32:49 +08:00
Ludovic Courtès
3cacfa9e1b
doc: Regenerate *.fr.texi. 2018-06-08 17:04:23 +02:00
Oleg Pykhalov
74032da3a2
import: elpa: Add recursive import.
* doc/guix.texi (Invoking guix import): Document elpa recursive import.
* guix/import/elpa.scm (elpa-package->sexp): Return package and
dependencies values.
(elpa-guix-name, elpa-recursive-import): New procedures.
* guix/scripts/import/elpa.scm (show-help, %options): Add recursive
option.
(guix-import-elpa): Use 'elpa-recursive-import'.
2018-06-08 14:58:33 +03:00
宋文武
97f6e9133a
services: Add dnsmasq-service-type.
* gnu/services/dns.scm (dnsmasq-service-type): New variable.
(<dnsmasq-configuration>): New record type.
(dnsmasq-shepherd-service): New procedure.
* doc/guix.texi (DNS Services): Document it.
2018-06-05 20:05:31 +08:00
Ludovic Courtès
838e17d805
gexp: Add 'with-extensions'.
* guix/gexp.scm (<gexp>)[extensions]: New field.
(gexp-attribute): New procedure.
(gexp-modules): Write in terms of 'gexp-attribute'.
(gexp-extensions): New procedure.
(gexp->derivation): Add #:effective-version.
[extension-flags]: New procedure.
Honor extensions of EXP.
(current-imported-extensions): New syntax parameter.
(with-extensions): New macro.
(gexp): Honor CURRENT-IMPORTED-EXTENSIONS.
(compiled-modules): Add #:extensions and honor it.
(load-path-expression): Likewise.
(gexp->script, gexp->file): Honor extensions.
* tests/gexp.scm (%extension-package): New variable.
("gexp-extensions & ungexp")
("gexp-extensions & ungexp-splicing")
("gexp-extensions and literal Scheme object")
("gexp->derivation & with-extensions")
("program-file & with-extensions"): New tests.
* doc/guix.texi (G-Expressions): Document 'with-extensions'.
2018-06-01 15:20:54 +02:00
Rouby Pierre-Antoine
93b83eb31e
services: Add hpcguix-web.
* gnu/service/web.scm (<hpcguix-web-configuration>): New record-type.
  (%hpcguix-web-accounts): New variable.
  (%hpcguix-web-activation,hpcguix-web-shepherd-service,
  hpcguix-web-service-type): New procedures.
* gnu/tests/web.scm (run-hpcguix-web-server-test): New procedure.
  (%hpcguix-web-specs, %hpcguix-web-os, %test-hpcguix-web): New variable.
* doc/guix.texi (Web Services): Add 'hpcguix-web'.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2018-06-01 13:50:26 +02:00
Ricardo Wurmus
ed71cda2ac
doc: Add concept index entry for Docker and guix pack.
* doc/guix.texi (Invoking guix pack): Add concept index entry for Docker.
2018-05-28 17:36:09 +02:00
Ricardo Wurmus
b2817f0fa5
pack: Add support for squashfs images.
* guix/scripts/pack.scm (%formats): Add "squashfs" format.
(guix-pack): Adjust "archiver" dependent on pack-format.
(squashfs-image): New procedure.
* doc/guix.texi (Invoking guix pack): Document it.
2018-05-28 17:36:09 +02:00
Ludovic Courtès
a5acc17a3c
file-systems: Remove 'title' field and add <file-system-label>.
The 'title' field was easily overlooked and was an endless source of
confusion.  Now, the value of the 'device' field is self-contained.

* gnu/system/file-systems.scm (<file-system>): Change constructor name
to '%file-system'.
[title]: Remove.
(<file-system-label>): New record type with printer.
(report-deprecation, device-expression)
(process-file-system-declaration, file-system): New macros.
(file-system-title): New procedure.
(file-system->spec, spec->file-system): Adjust to handle
<file-system-label>.
* gnu/system.scm (bootable-kernel-arguments): Add case for
'file-system-label?'.
(read-boot-parameters): Likewise.
(mapped-device-user): Avoid 'file-system-title'.
(fs->boot-device): Remove.
(operating-system-boot-parameters): Use 'file-system-device' instead of
'fs->boot-device'.
(device->sexp): Add case for 'file-system-label?'.
* gnu/bootloader/grub.scm (grub-root-search): Add case for
'file-system-label?'.
* gnu/system/examples/bare-bones.tmpl,
gnu/system/examples/beaglebone-black.tmpl,
gnu/system/examples/lightweight-desktop.tmpl,
gnu/system/examples/vm-image.tmpl: Remove uses of 'title'.
* gnu/system/vm.scm (virtualized-operating-system): Remove uses of
'file-system-title'.
* guix/scripts/system.scm (check-file-system-availability): Likewise,
and adjust fix-it hint.
(check-initrd-modules)[file-system-/dev]: Likewise.
* gnu/build/file-systems.scm (canonicalize-device-spec): Remove 'title'
parameter.
[canonical-title]: Remove.
Match on SPEC's type rather than on CANONICAL-TITLE.
(mount-file-system): Adjust caller.
* gnu/build/linux-boot.scm (boot-system): Interpret ROOT here.
* gnu/services/base.scm (file-system->fstab-entry): Remove use of
'file-system-title'.
* doc/guix.texi (File Systems): Remove documentation of the 'title'
field.  Rewrite documentation of 'device' and document
'file-system-label'.
2018-05-28 13:24:11 +02:00
Efraim Flashner
e9d271ed9a
services: Add Enlightenment desktop service.
* gnu/services/desktop.scm (<enlightenment-desktop-configuration>,
enlightenment-desktop-service-type): New variables.
* doc/guix.texi (Desktop Services): Document the service.
* NEWS: Mention it.
2018-05-20 21:42:32 +03:00
Christopher Baines
6ee3f3dec7
services: cgit: Make project-list permit a file-object.
Instead of having the service manage the list, it's useful to be able to point
this at an existing file, for example, when using cgit together with gitolite.

* gnu/services/cgit.scm (project-list?): New procedure.
(serialize-project-list): Handle file-object values.
(<cgit-configuration>): Change the predicate for project-list to allow lists
and file-objects.
2018-05-18 17:24:39 +01:00
Efraim Flashner
162825f965
daemon: Allow building for armhf-linux on aarch64-linux.
* nix/libstore/build.cc (canBuildLocally): Allow building armhf-linux
builds on aarch64-linux.
(DerivationGoal::runChild) Throw error if attempting to build for
armhf-linux on an unsupported platform.
* doc/guix.texi (Invoking guix build): Document how to build natively
for armhf-linux on aarch64-linux.  Add note that on some aarch64
machines this is unsupported.
2018-05-17 20:37:27 +03:00
Ludovic Courtès
63dbdf80a3
doc: Update 'guix size' example.
* doc/guix.texi (Invoking guix size): Update example.
2018-05-16 11:03:23 +02:00
Ludovic Courtès
2fd345cdfd
doc: Improve 'guix size' documentation.
Suggested by Martin Castillo <castilma@uni-bremen.de>.
Fixes <https://bugs.gnu.org/31456>.

* doc/guix.texi (Invoking guix size): Clarify that 'guix size' looks for
ungrafted packages.  Clarify that it can be passed several package
specifications.
2018-05-16 11:03:23 +02:00
Björn Höfling
5ac7bf56d0
doc: Update documentation of guix lint
* doc/guix.texi (Invoking guix lint): Add cpe-version to example.
(Invoking guix lint): Add example for lint-hidden-cve.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2018-05-14 23:01:36 +02:00
Pierre-Antoine Rouby
36d619e85d
services: bitlbee: Add plugins.
* doc/guix.texi (Bitlbee Service): Add plugins.
* gnu/services/messaging.scm (<bitlbee-configuration>): Add plugins argument.
  (bitlbee-shepherd-service): Update config file.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-05-11 00:15:59 +02:00
Ludovic Courtès
47a60325ca
pack: Add '--relocatable'.
* gnu/packages/aux-files/run-in-namespace.c: New file.
* Makefile.am (AUX_FILES): Add it.
* guix/scripts/pack.scm (<c-compiler>): New record type.
(c-compiler, bootstrap-c-compiler, c-compiler-compiler): New procedures.
(self-contained-tarball): Use
'relative-file-name' for the SOURCE -> TARGET symlink.
(docker-image): Add 'defmod' to please Geiser.
(wrapped-package, map-manifest-entries): New procedures.
(%options, show-help): Add --relocatable.
(guix-pack): Honor it.
2018-05-10 14:53:57 +02:00
Danny Milosavljevic
ad23a3fbab
doc: Document 'android-ndk-build-system'.
* doc/guix.texi (Build Systems): Add 'android-ndk-build-system'.
2018-05-09 19:32:40 +02:00
Tobias Geerinckx-Rice
9b557beab9
doc: Fix typo.
* doc/guix.texi (X Window): Fix ‘xinitr ’ typo.
2018-05-08 01:54:27 +02:00
Efraim Flashner
7017d87438
doc: Fix typo.
* doc/guix.texi (Desktop Services): Use 'any' when refering to more than
two desktop environments.
2018-05-07 22:06:15 +03:00
Oleg Pykhalov
8cd1e8e849
gnu: Add sound service.
* gnu/services/sound.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add this.
* doc/guix.texi (Sound Services): New chapter.
2018-05-02 15:11:13 +03:00
Ludovic Courtès
5986e94118
services: gpm: Provide a default value and document 'gpm-service-type'.
* gnu/services/base.scm (%default-gpm-options): New variable.
(<gpm-configuration>)[gpm, options]: Add default values.
(gpm-service-type)[default-value]: New field.
(gpm-service): Use %DEFAULT-GPM-OPTIONS and mark as deprecated.
* doc/guix.texi (Base Services): Document 'gpm-service-type' and
'gpm-configuration'.  Remove 'gpm-service'.
2018-04-30 14:22:43 +02:00
Danny Milosavljevic
d94e81dbfc
services: Add modem-manager-service-type.
* gnu/services/networking.scm (modem-manager-service-type): New variable.
(<modem-manager-configuration>): New variable.
(modem-manager-configuration): New procedure.
(modem-manager-configuration?): New procedure.
* doc/guix.texi (Networking Services): Document it.
* gnu/tests/networking.scm: Import (gnu services base).
2018-04-30 03:47:16 +02:00
Julien Lepiller
39764ef893
build: Use only one domain for guix-manual.
* Makefile.am (assert-no-store-file-names): Exclude guix-manual.
* po/doc/guix.pot po/doc/contributing.pot: Merge into...
* po/doc/guix-manual.pot: ...this.
* po/doc/guix.fr.po po/doc/contributing.fr.po: Merge into...
* po/doc/guix-manual.fr.po: ...this.
* doc/local.mk: Replace old file names.
* po/doc/local.mk: Replace old file names.
2018-04-29 21:42:14 +02:00
Ludovic Courtès
60912a888d
doc: Add tips for Vim users.
* doc/contributing.texi (Formatting Code): Add a paragraph about Vim.
2018-04-27 18:45:02 +02:00
Ludovic Courtès
06c4778ae2
build: Add silent rules for Texinfo xref translation.
* Makefile.am (AM_V_POXREF, AM_V_POXREF_, AM_V_POXREF_0): New
variables.
* doc/local.mk ($(srcdir)/%D%/guix.%.texi)
($(srcdir)/%D%/contributing.%.texi): Use $(AM_V_POXREF).
2018-04-25 23:11:53 +02:00
Chris Marusich
f1104d9009
services: Add dhcpd-service-type and <dhcpd-configuration>.
* doc/guix.texi (Networking Services): Document it.
* gnu/services/networking.scm (dhcpd-service-type): Add it.
(dhcpd-configuration, dhcpd-configuration?): Add it.
(dhcpd-configuration-package): Add it.
(dhcpd-configuration-config-file): Add it.
(dhcpd-configuration-version): Add it.
(dhcpd-configuration-run-directory): Add it.
(dhcpd-configuration-lease-file): Add it.
(dhcpd-configuration-pid-file): Add it.
(dhcpd-configuration-interfaces): Add it.
* gnu/tests/networking.scm (minimal-dhcpd-v4-config-file)
(dhcpd-v4-configuration, %dhcpd-os, run-dhcpd-test, %test-dhcpd): New
variables.
2018-04-21 23:46:30 -07:00
Julien Lepiller
bf5c74e713
gnu: doc: Add French documentation.
* doc/contributing.fr.texi: New file.
* doc/guix.fr.texi: New file.
* doc/local.mk (TRANSLATED_INFO): Add them.
(info_TEXINFOS): Add guix.fr.texi.
* po/doc/contributing.fr.po: New file.
* po/doc/guix.fr.po: New file.
* po/doc/local.mk (EXTRA_DIST): Add them.
2018-04-19 21:32:07 +02:00
Julien Lepiller
b9fe8fd662
gnu: doc: Allow documentation to be translated.
* po/doc/contributing.pot: New file.
* po/doc/guix.pot: New file.
* po/doc/local.mk: New file.
* Makefile.am: Include it. Add gettext command. Add silent rules for po4a.
* configure.ac: Look for po4a-translate and po4a-updatepo.
* doc/local.mk: Add rules to generate translated texi files.
(TRANSLATED_INFO): New variable.
(BUILT_SOURCES, EXTRA_DIST, MAINTAINERCLEANFILES): Add it.
* .gitignore: Add generated files.
2018-04-19 21:30:30 +02:00
Clément Lassieur
e5fe544eaa
services: cgit: Add support for project-list.
* doc/guix.texi (Version Control Services): Update accordingly.
* gnu/services/cgit.scm (cgit-configuration)[project-list]: New field.
(serialize-project-list): New procedure that uses PLAIN-FILE to generate a
file from the string list given by the user as input.
(serialize-cgit-configuration): Make sure to serialize 'project-list' before
'repostory-directory'.
2018-04-11 21:23:59 +02:00
Clément Lassieur
ad05e96e14
services: cgit: Add support for file-like objects.
* doc/guix.texi (Version Control Services): Update accordingly.
* gnu/services/cgit.scm (serialize-field, serialize-string, serialize-boolean,
serialize-integer, serialize-repository-cgit-configuration-list,
serialize-nginx-server-configuration-list, serialize-repo-field,
serialize-repo-boolean, serialize-repo-integer, serialize-module-link-path,
serialize-repository-directory, serialize-mimetype-alist): Return strings or
string-valued gexps and stop printing.
(repository-cgit-configuration)[source-filter, about-filter, commit-filter,
logo, owner-filter], (cgit-configuration)[auth-filter, commit-filter, css,
email-filter, favicon, include, logo, owner-filter, mimetype-file, readme,
source-filter]: Replace STRING with FILE-OBJECT.
(file-object?, serialize-file-object, repo-file-object?,
serialize-repo-file-object): New procedures.
(cgit-activation): Use SERIALIZE-CONFIGURATION's return value with
MIXED-TEXT-FILE instead of using its output with PLAIN-FILE.
2018-04-11 21:23:59 +02:00
Ludovic Courtès
4fbd1a2b7f
gexp: 'scheme-file' can splice expressions.
* guix/gexp.scm (<scheme-file>)[splice?]: New field.
(scheme-file): Add #:splice? and pass it to '%scheme-file'.
(scheme-file-compiler): Pass SPLICE? to 'gexp->file'.
(gexp->file): Add #:splice? and honor it.
* tests/gexp.scm ("gexp->file + #:splice?"): New test.
("gexp->derivation & with-imported-module & computed module"): Use
 #:splice? #t.
2018-04-11 01:03:47 +02:00
Ludovic Courtès
81c63cfc6f
doc: Recommend nano during installation.
* doc/guix.texi (Preparing for Installation)
(Proceeding with the Installation): Recommend nano.
2018-04-04 23:14:36 +02:00
Ludovic Courtès
fc95dc4c34
guix package: Add '--allow-collisions'.
Fixes <https://bugs.gnu.org/30830>.
Suggested by Ricardo Wurmus <rekado@elephly.net>.

* guix/scripts/package.scm (build-and-use-profile): Add
 #:allow-collisions? and pass it to 'profile-derivation'.
(show-help, %options): Add '--allow-collisions'.
(manifest-action, process-actions): Pass #:allow-collisions? to
'build-and-use-profile'.
* tests/guix-package.sh: Add collision test.
* doc/guix.texi (Invoking guix package): Document '--allow-collisions'.
2018-03-31 23:30:50 +02:00
Chris Marusich
881c61d062
doc: Improve <service-type> documentation.
* doc/guix.texi (Service Reference): Correct and clarify some statements
  regarding the "compose" and "extend" procedures of <service-type>.
2018-03-29 07:29:49 +02:00
Chris Marusich
3cd4447f56
guix-install.sh: Explicitly set root's home directory.
* etc/guix-install.sh (ROOT_HOME): New variable.
  (sys_create_store, sys_enable_guix_daemon, sys_authorize_build_farms):
  Use ROOT_HOME instead of ~root or the HOME environment variable.
* doc/guix.texi (Binary Installation): Instead of assuming that ~ and
  $HOME refer to root's directory simply because commands are being run
  as root, explicilty refer to it via ~root.

Fixes: <https://bugs.gnu.org/30728>
2018-03-29 07:03:37 +02:00
Ludovic Courtès
183445a6ed
weather: Report continuous integration stats.
* guix/scripts/weather.scm (histogram, throughput, queued-subset): New
procedures.
(report-server-coverage): Report CI information.
* doc/guix.texi (Invoking guix weather): Document it.
2018-03-28 16:17:06 +02:00
Ludovic Courtès
8980eea5ab
guix gc: Add '--derivers'.
* guix/scripts/gc.scm (show-help, %options): Add '--derivers'.
(guix-gc): Handle 'list-derivers'.
* tests/guix-gc.sh: Add test.
* doc/guix.texi (Invoking guix gc): Document it.
2018-03-27 14:51:44 +02:00
Ludovic Courtès
b06a70e05d
graph: Add "module" node type.
* guix/scripts/graph.scm (module-from-package)
(source-module-dependencies*): New procedures.
(%module-node-type): New variable.
(%node-types): Add it.
* guix/modules.scm (source-module-dependencies): Export.
* tests/graph.scm ("module graph"): New test.
* doc/guix.texi (Invoking guix graph): Document it.
2018-03-27 14:51:44 +02:00
Tobias Geerinckx-Rice
11e01891e3
doc: Fix typo.
* doc/guix.texi (Web Services): Fix ‘wether’ typo.
2018-03-25 00:36:30 +01:00
Chris Marusich
a335f6fcc9
system: Add "guix system docker-image" command.
* gnu/system/vm.scm (system-docker-image): New procedure.
* guix/scripts/system.scm (system-derivation-for-action): Add a case for
  docker-image, and in that case, call system-docker-image.
  (show-help): Document docker-image.
  (guix-system): Parse arguments for docker-image.
* doc/guix.texi (Invoking guix system): Document "guix system
  docker-image".
* gnu/system/examples/docker-image.tmpl: New file.
2018-03-24 03:04:11 +01:00
Chris Marusich
272c070962
tests: Add tests for "guix pack".
* guix/scripts/pack.scm (bootstrap-xz): New variable.
  (%options) <--bootstrap>: New option.
  (show-help): Document the new --bootstrap option.
  (guix-pack): When --bootstrap is specified, use the bootstrap Guile,
  tar, and xz to build the pack, and do not use any profile hooks or
  locales.
* doc/guix.texi (Invoking guix pull): Document the new --bootstrap
  option.
* tests/guix-pack.sh: New file.
* Makefile.am (SH_TESTS): Add guix-pack.sh.
* gnu/packages/package-management.scm (guix) <inputs>: Add util-linux.
2018-03-24 03:04:07 +01:00
Leo Famulari
03e1cca2ab
doc: Move Cgit Service documentation to the Version Control section.
* doc/guix.texi (Miscellaneous Services): Move the Cgit Service to
section Version Control Services.
2018-03-23 15:19:53 -04:00
Ludovic Courtès
427ec19e88
gexp: 'program-file' has a new #:module-path parameter.
* guix/gexp.scm (<program-file>): Add 'path' field.
(program-file): Add #:module-path parameter and honor it.
(program-file-compiler): Honor the 'path' field.
* tests/gexp.scm ("program-file #:module-path"): New test.
* doc/guix.texi (G-Expressions): Update.
2018-03-23 18:41:07 +01:00
Ludovic Courtès
1ae16033f3
gexp: 'gexp->script' and 'gexp->file' have a new #:module-path parameter.
* guix/gexp.scm (load-path-expression): Add 'path' optional parameter.
(gexp->script): Add #:module-path and honor it.
(gexp->file): Likewise.
* tests/gexp.scm ("gexp->script #:module-path"): New test.
* doc/guix.texi (G-Expressions): Update accordingly.
2018-03-23 18:41:07 +01:00
Maxim Cournoyer
b75e1df663
doc: Add index entries for realtime and jackd in the manual.
* doc/guix.texi (Base Services): Add realtime and jackd indices to the
`pam-limits-service' service, as the examples shows how they can be
configured.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-03-22 11:48:03 +01:00
ng0
4a78fd4617
Correct name and Email for ng0.
* .mailmap: Correct name and Email for ng0.
* Makefile.am, doc/guix.texi, etc/completion/fish/guix.fish
gnu/packages/accessibility.scm, gnu/packages/admin.scm,
gnu/packages/audio.scm, gnu/packages/autotools.scm,
gnu/packages/cdrom.scm, gnu/packages/check.scm,
gnu/packages/cinnamon.scm, gnu/packages/compression.scm,
gnu/packages/crypto.scm, gnu/packages/databases.scm,
gnu/packages/django.scm, gnu/packages/dns.scm,
gnu/packages/emacs.scm, gnu/packages/enlightenment.scm,
gnu/packages/fonts.scm, gnu/packages/fontutils.scm,
gnu/packages/forth.scm, gnu/packages/fvwm.scm,
gnu/packages/games.scm, gnu/packages/gl.scm,
gnu/packages/gnome.scm, gnu/packages/gnunet.scm,
gnu/packages/gnupg.scm, gnu/packages/gnuzilla.scm,
gnu/packages/gtk.scm, gnu/packages/guile-wm.scm,
gnu/packages/guile.scm, gnu/packages/haskell-check.scm,
gnu/packages/haskell-crypto.scm, gnu/packages/haskell.scm,
gnu/packages/image-viewers.scm, gnu/packages/image.scm,
gnu/packages/irc.scm, gnu/packages/language.scm,
gnu/packages/libcanberra.scm, gnu/packages/linux.scm,
gnu/packages/lisp.scm, gnu/packages/lolcode.scm,
gnu/packages/lxde.scm, gnu/packages/lxqt.scm,
gnu/packages/mail.scm, gnu/packages/markup.scm,
gnu/packages/mate.scm, gnu/packages/maths.scm,
gnu/packages/mc.scm, gnu/packages/messaging.scm,
gnu/packages/music.scm, gnu/packages/ncurses.scm,
gnu/packages/networking.scm, gnu/packages/nickle.scm,
gnu/packages/openbox.scm, gnu/packages/pdf.scm,
gnu/packages/perl-check.scm, gnu/packages/perl.scm,
gnu/packages/python-crypto.scm, gnu/packages/python-web.scm,
gnu/packages/python.scm, gnu/packages/qt.scm,
gnu/packages/ruby.scm, gnu/packages/rust.scm,
gnu/packages/scheme.scm, gnu/packages/serialization.scm,
gnu/packages/shells.scm, gnu/packages/ssh.scm,
gnu/packages/suckless.scm, gnu/packages/tbb.scm,
gnu/packages/telephony.scm, gnu/packages/text-editors.scm,
gnu/packages/textutils.scm, gnu/packages/time.scm,
gnu/packages/tls.scm, gnu/packages/tor.scm,
gnu/packages/version-control.scm, gnu/packages/video.scm,
gnu/packages/vim.scm, gnu/packages/web.scm,
gnu/packages/wm.scm, gnu/packages/xdisorg.scm,
gnu/packages/xfce.scm, gnu/packages/xml.scm,
gnu/packages/xorg.scm, gnu/services/certbot.scm,
gnu/services/desktop.scm, gnu/services/version-control.scm,
gnu/services/web.scm, guix/import/hackage.scm,
guix/licenses.scm: Likewise.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2018-03-20 17:17:58 +01:00
Ludovic Courtès
cfbf6de18c
gnu: mcron: Update to 1.1 and deprecate "mcron2".
* gnu/packages/guile.scm (mcron): Update to 1.1.
[native-inputs]: Add TZDATA-FOR-TESTS.
[arguments]: New field.
(mcron2): Define using 'deprecated-package'.
* gnu/services/mcron.scm: Replace 'mcron2' with 'mcron'.
* doc/guix.texi (Scheduled Job Execution): Likewise.
* gnu/tests/base.scm (%mcron-os): Remove comment about mcron2.
2018-03-19 23:19:49 +01:00
Martin Castillo
985934cb21
services: openssh: Add 'accepted-environment' field.
* gnu/services/ssh.scm (<openssh-configuration>)[accepted-environment]: New field.
(openssh-config-file): Honor 'acccepted-environment'.
* doc/guix.texi (Networking Services): Document it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-03-18 00:02:05 +01:00
Ludovic Courtès
61b1dbbdcd
guix system: Add '--skip-checks'.
Fixes <https://bugs.gnu.org/30760>.
Reported by Tomáš Čech <sleep_walker@gnu.org>.

* guix/scripts/system.scm (perform-action): Add #:skip-safety-checks?
and honor it.
(show-help, %options): Add --skip-checks.
(process-action): Pass #:skip-safety-checks? to 'perform-action'.
* doc/guix.texi (Invoking guix system): Document --skip-checks.
2018-03-15 10:28:22 +01:00
Julien Lepiller
1f3921e143
doc: Explain what we mean by root in binary installation.
* doc/guix.texi (Binary Installation): Add explicit instructions to become root.
2018-03-08 22:03:19 +01:00
Ludovic Courtès
ca041ec1a3
doc: Adjust 'xset -fp' command to avoid symlinks.
Fixes <https://bugs.gnu.org/30655>.
Reported by Marco van Hulten <marco@hulten.org>.

* doc/guix.texi (Application Setup): Adjust 'xset +fp' example.
2018-03-05 10:41:18 +01:00
Efraim Flashner
16718b6776
services: Add openntpd service.
* gnu/packages/ntp.scm (openntpd)[arguments]: Add 'configure-flags to
set openntpd daemon's user and localstatedir. Add a custom phase to not
try to create said directory at install time.
* gnu/services/networking.scm (<openntpd-configuration>): New record type.
(openntpd-shepherd-service, openntpd-service-activation): New procedures.
(openntpd-service-type): New variable.
* doc/guix.texi (Networking Services): Add openntpd documentation.
2018-03-05 08:46:28 +02:00
Clément Lassieur
bdcf0e6fd4
services: messaging: Prosody config supports file-like objects.
* doc/guix.texi (Messaging Services): Update accordingly.
* gnu/services/configuration.scm (serialize-configuration,
serialize-maybe-stem, serialize-package): Return strings or string-valued
gexps (these procedures were only used for their side-effects).
* gnu/services/messaging.scm (serialize-field, serialize-field-list,
enclose-quotes, serialize-raw-content, serialize-ssl-configuration,
serialize-virtualhost-configuration-list,
serialize-int-component-configuration-list,
serialize-ext-component-configuration-list,
serialize-virtualhost-configuration, serialize-int-component-configuration,
serialize-ext-component-configuration, serialize-prosody-configuration):
Return strings or string-valued gexps and stop printing.
(prosody-activation): Use SERIALIZE-PROSODY-CONFIGURATION's return value with
MIXED-TEXT-FILE instead of using its output with PLAIN-FILE.
(serialize-non-negative-integer, serialize-non-negative-integer-list): Convert
numbers to strings.
(file-object?, serialize-file-object, file-object-list?,
serialize-file-object-list): New procedures.
(ssl-configuration)[capath, cafile], (prosody-configuration)[plugin-paths,
groups-file]: Replace FILE-NAME with FILE-OBJECT.
* guix/gexp.scm (file-like?): New exported procedure.
2018-03-03 18:21:52 +01:00
Ludovic Courtès
eac026e5c8
linux-initrd: Add virtio modules to '%base-initrd-modules'.
Fixes a regression in installation tests, whereby 'guix system init'
would report that virtio modules are missing for the target devices.
In practice virtio modules were always available since 'base-initrd' was
always called with #:virtio? #t.  This commit simply moves them to
'%base-initrd-modules' so that 'guix system' knows they're available.

Reported by Danny Milosavljevic <dannym@scratchpost.org> at
<https://debbugs.gnu.org/cgi/bugreport.cgi?bug=30629#112>.

* gnu/system/linux-initrd.scm (default-initrd-modules): Add virtio
modules.
(base-initrd): Remove #:virtio? and 'virtio-modules'.
* gnu/system/vm.scm (expression->derivation-in-linux-vm)
(system-qemu-image, virtualized-operating-system): Remove uses of
 #:virtio?.
* doc/guix.texi (Initial RAM Disk): Update 'base-initrd' doc.
2018-03-03 09:41:21 +01:00
Ludovic Courtès
bc499b113a
system: Add 'initrd-modules' field.
* gnu/system.scm (<operating-system>)[initrd-modules]: New field.
(operating-system-initrd-file): Pass #:linux-modules to 'make-initrd'.
* gnu/system/linux-initrd.scm (default-initrd-modules): New procedure.
(%base-initrd-modules): New macro.
(base-initrd): Add #:linux-modules and honor it.
* gnu/system/install.scm (embedded-installation-os): Use
'initrd-modules' instead of 'initrd'.
* gnu/tests/install.scm (%raid-root-os): Likewise.
* doc/guix.texi (operating-system Reference): Add 'initrd-modules'.
(Initial RAM Disk): Document it.  Adjust example to not use
 #:extra-modules.
2018-03-02 13:53:10 +01:00
Mike Gerwitz
e37944d827
environment: Add --user.
This change allows overriding the home directory of all filesystem mappings to
help hide the identity of the calling user in a container.

* doc/guix.texi (Invoking guix environment)[--container]: Mention --user.
[--user]: Add item.
* guix/scripts/environment.scm (show-help): Add --user.
(%options): Add --user.
(launch-environment/container) Add 'user' parameter.  Update doc.  Override
'user-mappings' using 'override-user-mappings'.  Consider override for chdir.
(mock-passwd, user-override-home, overrid-euser-dir): New procedures.
(guix-environment): Disallow --user without --container.  Provide user to
'launch-environment/container'.
* tests/guix-environment.sh: Add user test.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-03-02 11:55:43 +01:00
Mike Gerwitz
07ec349229
environment: Add --link-profile.
This change is motivated by attempts to run programs (like GNU IceCat) within
containers.  The 'fontconfig' program, for example, is configured explicitly
to check ~/.guix-profile for additional fonts.

There were no existing container tests in 'tests/guix-environment.sh', but I
added one anyway for this change.

* doc/guix.texi (Invoking guix environment): Add '--link-profile'.
* guix/scripts/environment.scm (show-help): Add '--link-profile'.
(%options): Add 'link-profile' as '#\P', assigned to 'link-profile?'.
(link-environment): New procedure.
(launch-environment/container): Use it when 'link-profile?'.
[link-profile?]: New parameter.
(guix-environment): Leave when '--link-prof' but not '--container'.  Add
'#:link-profile?' argument to 'launch-environment/container' application.
* tests/guix-environment-container.sh: New '--link-profile' test.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-03-02 11:55:42 +01:00
Oleg Pykhalov
e1cf4fd2d2
services: cgit: Add more configuration fields.
* gnu/services/version-control.scm (cgit-service-type): Move to separate file.
* gnu/services/cgit.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add this.
* gnu/tests/version-control.scm: Add this.
* doc/guix.texi (Cgit Service): Document this.
2018-02-28 04:40:56 +03:00
Ludovic Courtès
1d84d7bf60
build: Require Guile >= 2.0.13.
* README, configure.ac, doc/guix.texi (Requirements): Increase minimum
Guile version from 2.0.9 to 2.0.13.
* config-daemon.ac: Remove use of 'GUIX_CHECK_UNBUFFERED_CBIP'.
* m4/guix.m4 (GUIX_CHECK_UNBUFFERED_CBIP): Remove.
* guix/build/download.scm (current-http-proxy): Remove.
* guix/build/syscalls.scm (%libc-errno-pointer, errno): Remove.
(syscall->procedure): Use #:return-errno unconditionally.
* guix/hash.scm (open-sha256-input-port)[unbuffered]: Remove outdated
comment.
* guix/http-client.scm (when-guile<=2.0.5-or-otherwise-broken): Remove.
<top level>: Remove 'when-guile<=2.0.5-or-otherwise-broken' block.
* guix/scripts/substitute.scm (fetch): Remove 'guile-version>?'
conditional.
* tests/hash.scm (supports-unbuffered-cbip?): Remove.
<top level>: Remove 'test-skip' call.
2018-02-26 18:19:34 +01:00
Clément Lassieur
fece75fe35
services: certbot: Allow to set a deploy hook.
* doc/guix.texi (Certificate Services): Document it.
* gnu/services/certbot.scm (<certificate-configuration>, certbot-command): Add
it.
2018-02-22 21:43:54 +01:00
Clément Lassieur
a2cb2bbc0b
services: certbot: Allow to set RSA key size.
* doc/guix.texi (Certificate Services): Document it.
* gnu/services/certbot.scm (<cerbot-configuration>, certbot-command,
certbot-activation, certbot-nginx-server-configurations): Add it.
2018-02-22 21:43:54 +01:00
Clément Lassieur
0420a293cc
doc: Fix typo in certbot-configuration description.
* doc/guix.texi (Certificate Services): Fix typo.
2018-02-22 21:43:54 +01:00
Clément Lassieur
c3215d2f9d
services: certbot: Associate one certificate with several domains.
* doc/guix.texi (Certificate Services): Document <certificate-configuration>,
the change from domains to certificates and the fact that their path is now
derived from their name.
* gnu/services/certbot.scm (<certificate-configuration>): Add and export it.
(certbot-configuration, certbot-command, certbot-activation,
certbot-nginx-server-configurations, certbot-service-type): Replace 'domains'
with 'certificates'.
(certbot-nginx-server-configurations): Use only one nginx-server-configuration
and use all certificate domains as the server-name.
2018-02-22 21:43:53 +01:00
Clément Lassieur
65fc1d890d
services: certbot: Get certbot to run non-interactively.
* doc/guix.texi (Certificate Services): Add email field and link to the ACME
Subscriber Agreement.
* gnu/services/certbot.scm (<certbot-configuration>, certbot-command,
certbot-activation, certbot-nginx-server-configurations): Add email field.
(certbot-command): Add '-n' and '--agree-tos' options.
(certbot-service-type): Remove default-value.
2018-02-22 21:43:53 +01:00
Clément Lassieur
966fd7b7e9
services: certbot: Rename 'host' to 'domain'.
* doc/guix.texi (Certificate Services): Rename 'host' to 'domain'.
* gnu/services/certbot.scm (<certbot-configuration>, certbot-renewal-jobs,
certbot-activation, certbot-nginx-server-configurations,
certbot-service-type): Rename 'host' to 'domain'.
2018-02-22 21:43:53 +01:00
Clément Lassieur
7ab04c17c0
services: certbot: Run certbot twice a day at a random minute.
* doc/guix.texi (Certificate Services): Document it.
* gnu/services/certbot.scm (certbot-renewal-jobs): Change job's time
specification.
2018-02-22 21:43:52 +01:00
David Thompson
267379f852
environment: Add --manifest option.
* guix/scripts/environment.scm (show-help, %options): Add -m/--manifest.
(options/resolve-packages): Handle manifests.
* tests/guix-envronment.sh: Add a test.
* doc/guix.texi (Invoking guix environment): Document it.
2018-02-21 22:16:38 -05:00
Danny Milosavljevic
736e45a278
services: slim: Make the logged-in session show up in "w".
* gnu/services/xorg.scm (slim-shepherd-service): Use SESSREG to register X11
session.
* doc/guix.texi (slim-configuration): Document new field "sessreg".
2018-02-20 21:15:54 +01:00
Konrad Hinsen
4a979afe1b
pack: Add '--manifest'.
* guix/scripts/pack.scm (%options, show-help): Add --manifest.
(guix-pack)[manifest-from-args]: New procedure.
Use it.
* doc/guix.texi (Invoking guix pack): Document --manifest.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-02-15 15:40:36 +01:00
Danny Milosavljevic
5a9902c8ac
services: agetty: Add agetty instance to base services. Make its tty optional.
* gnu/services/base.scm (%base-services): Instantiate agetty-service.
(default-serial-port): New variable.
(agetty-shepherd-service): Make tty optional, default to the above.
* doc/guix.texi (agetty-configuration): Update "tty" documentation.
* gnu/system/install.scm (agetty-default-service): Delete variable.
(embedded-installation-os): Remove agetty-default-service instance.
Add "console" kernel-argument.
2018-02-15 12:05:21 +01:00
Julien Lepiller
08da664d10
gnu: Add cat-avatar-generator-service.
* gnu/services/web.scm (cat-avatar-generator-service): New variable.
* doc/guix.text (Web Services): Document it.
2018-02-14 23:18:41 +01:00
Rutger Helling
75538328c2
doc: Mention starting GNOME on Wayland manually.
* doc/guix.texi (Desktop Services): Mention starting GNOME on Wayland manually.
2018-02-14 08:49:28 +01:00
Arun Isaac
a76acfd3f5
gnu: services: Add wesnothd service.
* gnu/services/games.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi (Game Services): Document the service.
2018-02-09 14:55:17 +05:30
Ricardo Wurmus
b617a9fe23
etc: Add SELinux policy for the daemon.
* etc/guix-daemon.cil.in: New file.
* Makefile.am (dist_selinux_policy_DATA): Define it.
* configure.ac: Handle --with-selinux-policy-dir.
* doc/guix.texi (SELinux Support): New section.
2018-02-07 15:41:23 +01:00
Ludovic Courtès
a5e03674d1
doc: Document the 'upstream-name' property.
Reported by Hartmut Goebel <h.goebel@crazy-compilers.com>.

* doc/guix.texi (Invoking guix refresh): Document 'upstream-name'.
2018-02-05 16:54:27 +01:00
Tobias Geerinckx-Rice
d16948bf30
doc: guix-publish-configuration-ttl is in seconds.
* doc/guix.texi (Base Services): Document that
guix-publish-configuration-ttl takes its value in seconds.
2018-02-04 19:22:34 +01:00
Ricardo Wurmus
6f4e8693e7
etc: Add installation script.
* etc/guix-install.sh: New file.
* Makefile.am (EXTRA_DIST): Add it.
* doc/guix.texi (Binary Installation): Mention it.

Co-authored-by: sharlatan <sharlatanus@gmail.com>
2018-01-30 03:48:04 +01:00
Tobias Geerinckx-Rice
01bd3b5edd
doc: Unconfuse file systems and partitions.
Partitions can have their own labels and UUIDs (e.g. under GPT) that are
unrelated to those of the contained file system.  Confusing the two ends
poorly.

* doc/guix.scm (File Systems, Proceeding with the Installation)
(Using the Configuration System, Initial RAM Disk): Substitute `file
system' for `partition' when talking about labels and UUIDs.
2018-01-29 23:27:53 +01:00
Tobias Geerinckx-Rice
d64e1746b9
doc, gnu: Fix spelling of screen-things.
* doc/guix.texi (X Window): Write 'screen locker' and 'screen saver' in
prose.
* gnu/services/xorg.scm (screen-locker-service): Likewise.
2018-01-29 23:27:53 +01:00
Tobias Geerinckx-Rice
5481887dde
doc: Fix SCREEN-LOCKER-SERVICE description.
* doc/guix.texi (X Window): Correct the documentation for the
SCREEN-LOCKER-SERVICE procedure.
2018-01-29 23:27:52 +01:00
Tobias Geerinckx-Rice
0c3deaccef
doc: Replace a stale reference to a code snippet.
The text refers to a snippet which has since been removed, but a
suitable replacement is near.  Use it.

* doc/guix.texi (Using the Configuration System): Substitute bind for
tcpdump.
2018-01-29 23:27:52 +01:00
Diego Nicola Barbato
d2a7170def
doc: Mention escpr in CUPS configuration example.
Suggested by Danny Milosavljevic <dannym@scratchpost.org>.

* doc/guix.texi (Printing Services): Mention how to add support for
Epson printers to CUPS via escpr in the configuration example.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-01-28 23:54:00 +01:00
Tobias Geerinckx-Rice
782c94fe30
doc: Improve ‘fix-runpath’ description.
* doc/guix.texi (Build Systems): Re-write ‘fix-runpath’ documentation
entirely.  Just fixing the typos didn't do much.
2018-01-21 02:50:16 +01:00
Ludovic Courtès
d466b1fc82
services: Missing services are automatically instantiated.
This simplifies OS configuration: users no longer need to be aware of
what a given service depends on.

See the discussion at
<https://lists.gnu.org/archive/html/guix-devel/2018-01/msg00114.html>.

* gnu/services.scm (missing-target-error): New procedure.
(service-back-edges): Use it.
(instantiate-missing-services): New procedure.
* gnu/system.scm (operating-system-services): Call
'instantiate-missing-services'.
* tests/services.scm ("instantiate-missing-services")
("instantiate-missing-services, no default value"): New tests.
* gnu/services/version-control.scm (cgit-service-type)[extensions]: Add
FCGIWRAP-SERVICE-TYPE.
* gnu/tests/version-control.scm (%cgit-os): Remove NGINX-SERVICE-TYPE
and FCGIWRAP-SERVICE-TYPE instances.
* doc/guix.texi (Log Rotation): Remove 'mcron-service-type' in example.
(Miscellaneous Services): Remove 'nginx-service-type' and
'fcgiwrap-service-type' in Cgit example.
2018-01-21 00:24:03 +01:00
Mathieu Lirzin
523790d11d
build: Declare “doc/guix.texi“ dependencies.
Fixes <https://bugs.gnu.org/29727>.

* doc/local.mk (%C%_guix_TEXINFOS): New variable containing files included by
“doc/guix.texi”.
(EXTRA_DIST): Remove ‘.texi’ files.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-01-20 00:45:29 +01:00
Tobias Geerinckx-Rice
162a137400
gnu: Consistently Write ‘file system(s)’.
It is the GNU way.

* doc/guix.texi (Build Systems, DNS Services): Write ‘file system(s)’.
* gnu/build/vm.scm (create-ext-file-system, create-fat-file-system):
Likewise.
* gnu/packages/backup.scm (dirvish, rsnapshot)[description]: Likewise.
* gnu/packages/check.scm (python-testpath)[description]: Likewise.
* gnu/packages/disk.scm (pydf)[description]: Likewise.
* gnu/packages/file-systems.scm (disorderfs)[synopsis, description]: Likewise.
(glusterfs)[description]: Likewise.
* gnu/packages/haskell.scm (ghc-directory, ghc-system-fileio-bootstrap)
(ghc-system-fileio)[synopsis]: Likewise.
(ghc-fsnotify)[description]: Likewise.
* gnu/packages/linux.scm (proot)[description]: Likewise.
(jmtpfs)[synopsis, description]: Likewise.
* gnu/packages/mate.scm (caja, caja-extensions)[description]: Likewise.
* gnu/packages/storage.scm (ceph)[description]: Likewise.
* gnu/packages/sync.scm (lsyncd)[description]: Likewise.
* gnu/packages/syncthing.scm (syncthing)[synopsis]: Likewise.
(go-github-com-zillode-notify)[description]: Likewise.
* gnu/services/nfs.scm (pipefs-service-type): Likewise.
* guix/scripts/system.scm (perform-action): Likewise.
2018-01-19 17:28:31 +01:00
Ludovic Courtès
67441b9a6e
doc: Suggest running guix-daemon with 'sudo -E'.
Suggested by Martin H. <maze@strahlungsfrei.de>.

* doc/contributing.texi (Running Guix Before It Is Installed): Suggest
'sudo -E'.
2018-01-17 15:48:22 -08:00
Danny Milosavljevic
ba4919122a
docs: Fix typo in qemu-binfmt example.
* doc/guix.texi (Virtualization Services): Document 'guix-support?' properly.
2018-01-17 16:09:59 +01:00
Christopher Baines
d067e4badc
gnu: services: web: Add service for httpd.
* gnu/services/web.scm (<httpd-module>,
  <httpd-config-file>, <httpd-virtualhost>
  <httpd-configuration>): New record types.
  (%default-httpd-modules, %httpd-accounts,
  httpd-service-type): New variables.
  (httpd-shepherd-services, httpd-activation,
  httpd-process-extensions): New procedures.
* gnu/tests/web.scm (run-httpd-test): New procedure.
  (%httpd-os, %tests-httpd): New variables.
* doc/guix.texi (Web Services): Document the Apache HTTP Server.
2018-01-17 08:43:47 +00:00
Ludovic Courtès
6628921a9a
doc: Fix typo.
Reported by Nicolas Goaziou.

* doc/guix.texi (Invoking guix archive): Fix typo.
2018-01-16 16:00:21 +01:00
Ludovic Courtès
37af37dcc9
doc: Deprecate 'bitlbee-service' procedure.
* gnu/services/messaging.scm (bitlbee-service): Mark as deprecated.
* doc/guix.texi (Messaging Services): Document 'bitlbee-service-type'
and 'bitlbee-configuration'.  Remove 'bitlbee-service'.
2018-01-15 23:29:33 +01:00
Ludovic Courtès
f2bee4210f
services: bitlbee: Move to (gnu services messaging).
* gnu/services/networking.scm (<bitlbee-configuration>)
(bitlbee-shepherd-service, %bitlbee-accounts, %bitlbee-activation)
(bitlbee-service-type, bitlbee-service): Move to...
* gnu/services/messaging.scm: ... here.
* doc/guix.texi (Networking Services): Move 'bitlbee-service' doc to...
(Messaging Services): ... here.
2018-01-15 23:29:33 +01:00
Ludovic Courtès
9d4399b805
doc: Connect "guix archive", "guix pack", and co.
* doc/guix.texi (Invoking guix pack): Add xrefs to "guix publish", "guix
copy", and "guix archive".
(Invoking guix archive): Add xref to "guix pack".
2018-01-15 23:29:33 +01:00
Andreas Enge
7baf6615e9
doc: Correct documentation of NGINX-LOCATION-CONFIGURATION.
* doc/guix.texi (Web Services): The body of an NGINX-LOCATION-CONFIGURATION
is a list of strings and not a string.
2018-01-14 16:24:00 +01:00
Ludovic Courtès
71b98b9de9
services: qemu-binfmt: Extend guix-daemon with extra chroot directories.
Fixes <https://bugs.gnu.org/20239>.

* gnu/services/virtualization.scm (<qemu-binfmt-configuration>)[guix-support?]:
New field.
(qemu-binfmt-guix-chroot): New procedure.
(qemu-binfmt-service-type)[extensions]: Add GUIX-SERVICE-TYPE.
* doc/guix.texi (Virtualization Services): Document 'guix-support?'.
(Additional Build Options): Mention binfmt_misc and offloading under
'--system'.
2018-01-11 14:42:31 +01:00
Ludovic Courtès
6738c29fbf
services: Add qemu-binfmt.
* gnu/services/virtualization.scm (<qemu-platform>): New record type.
(bv): New macro.
(%i386, %i486, %alpha, %arm, %armeb, %sparc, %sparc32plus)
(%ppc, %ppc64, %ppc64le, %m68k, %mips, %mipsel, %mipsn32el)
(%mips64, %mips64el, %sh4, %sh4eb, %s390x, %aarch64, %hppa)
(%qemu-platforms): New variables.
(lookup-qemu-platforms): New procedure.
(<qemu-binfmt-configuration>): New record type.
(qemu-platform->binfmt): New procedures.
(%binfmt-mount-point, %binfmt-register-file, %binfmt-file-system)
(qemu-binfmt-service-type): New variables.
(qemu-binfmt-shepherd-services): New procedures.
* doc/guix.texi (Virtualization Services): Add "Transparent Emulation
with QEMU" heading.

binfmt fixlet
2018-01-11 14:29:49 +01:00
Ludovic Courtès
158eadefc8
doc: Fix typo in 'guix environment' example.
* doc/guix.texi (Invoking guix environment): Add missing @ in example.
2018-01-11 00:00:03 +01:00
宋文武
693b52df68
gnu: services: Add darkstat service.
* gnu/services/monitoring.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi (Monitoring Services): Document it.
2018-01-08 20:43:35 +08:00
Ludovic Courtès
f4596f7630
services: guix: Add 'log-compression' option.
* gnu/services/base.scm (<guix-configuration>)[log-compression]: New
field.
(guix-shepherd-service): Use 'match-record' instead of 'match'.  Honor
'log-compression'.
* doc/guix.texi (Base Services): Document 'log-compression'.
2018-01-08 10:40:17 +01:00
Ludovic Courtès
c04ffadbed
publish: Publish build logs.
* guix/scripts/publish.scm (render-log-file): New procedure.
(make-request-handler): Add "log" case.
* tests/publish.scm ("/log/NAME")
("/log/NAME not found"): New tests.
* doc/guix.texi (Invoking guix publish): Document /log URLs.
2018-01-07 23:51:46 +01:00
Ludovic Courtès
06e3a5181e
doc: Mark zlib as mandatory, libbz2 as optional.
* doc/guix.texi (Requirements): Move zlib to mandatory and libbz2 to
optional.
* README: Ditto.
2018-01-07 23:47:22 +01:00
Ludovic Courtès
29a6866886
daemon: Add gzip log compression.
* nix/nix-daemon/guix-daemon.cc (GUIX_OPT_LOG_COMPRESSION): New macro.
(options): Mark "disable-log-compression" as hidden and add
"log-compression".
(parse_opt): Handle GUIX_OPT_LOG_COMPRESSION.
* nix/libstore/build.cc (DerivationGoal): Add 'gzLogFile'.
(openLogFile): Initialize it when 'logCompression' is COMPRESSION_GZIP.
(closeLogFile, handleChildOutput): Honor 'gzLogFile'.
* nix/libstore/globals.hh (Settings)[compressLog]: Remove.
[logCompression]: New field.
(CompressionType): New enum.
* nix/libstore/globals.cc (Settings::Settings): Initialize it.
(update): Remove '_get' call for 'compressLog'.
* nix/local.mk (guix_daemon_LDADD, guix_register_LDADD): Add -lz.
* guix/store.scm (log-file): Handle '.gz' log files.
* tests/guix-daemon.sh: Add test with '--log-compression=gzip'.
* doc/guix.texi (Invoking guix-daemon): Adjust accordingly.
* config-daemon.ac: Check for libz and zlib.h.
2018-01-07 23:47:22 +01:00
Rutger Helling
3853f86fdf
doc: Describe Wayland status.
* doc/guix.texi (Desktop Services): Add a paragraph about the current status of
Wayland in Guix.
2018-01-06 18:15:05 +01:00
Mark H Weaver
1c27f72fc2
doc: Fix typo.
* doc/guix.texi (Desktop Services): "orMATE" --> "or MATE".
2017-12-30 21:05:09 -05:00
ng0
431703ffd0
gnu: services: Add MATE desktop service.
* gnu/services/desktop.scm (<mate-desktop-configuration>,
mate-desktop-service-type): New variable.
(mate-desktop-service): New public variable.

* doc/guix.texi (Desktop Services): Document the service.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2017-12-30 22:55:26 +01:00
Marius Bakke
db8ed7cee8
services: networking: Add a dependency override mechanism to <static-networking>.
* gnu/services/networking.scm (<static-networking>)[requirement]: New field.
(static-networking-shepherd-service): Don't override requirement for loopback.
(static-networking-service): Expose 'requirement' parameter.  Default to UDEV.
* gnu/services/base.scm (%base-services): Add (requirement '()) for loopback service.
* doc/guix.texi (Networking Services): Document it.
2017-12-29 14:06:26 +01:00
Tobias Geerinckx-Rice
d2c3be991c
doc: Fix typo.
* doc/guix.texi (Application Setup): Transpose words.
2017-12-26 14:41:01 +01:00
Tobias Geerinckx-Rice
e9960d8cba
gnu, doc: Use HTTPS for cran.r-project.org home pages.
* gnu/packages/bioinformatics.scm (r-sparql, r-acsnminer, r-gkmsvm)
(r-maldiquant, r-gprofiler)[home-page]: Use HTTPS.
* gnu/packages/cran.scm (r-colorspace, r-auc, r-calibrate, r-shape)
(r-compare, r-proxy, r-sp, r-rmtstat, r-lmtest, r-inline, r-bbmle)
(r-lpsolve, r-energy, r-suppdists, r-ksamples, r-cvst, r-drr, r-prodlim)
(r-ddalpha, r-rcpproll, r-ipred, r-psych, r-truncnorm, r-rsolnp, r-laeken)
(r-vcd, r-ica, r-scatterplot3d)[home-page]: Likewise.
* gnu/packages/machine-learning.scm (r-adaptivesparsity, r-kernlab)
[home-page]: Likewise.
* gnu/packages/maths.scm (r-quadprog, r-pracma)[home-page]: Likewise.
* gnu/packages/statistics.scm (r-boot, r-cluster, r-codetools, r-foreign)
(r-kernsmooth, r-nlme, r-mgcv, r-rpart, r-dichromat, r-estimability)
(r-pheatmap, r-labeling, r-magrittr, r-munsell, r-rcolorbrewer, r-sendmailr)
(r-gdtools, r-acepack, r-formula, r-locfit, r-chron, r-coda, r-backports)
(r-brew, r-commonmark, r-rstudioapi, r-plotrix, r-gridbase, r-bitops)
(r-catools, r-xnomial, r-lambda-r, r-whoreadsthis, r-futile-options)
(r-futile-logger, r-segmented, r-snow, r-iterators, r-foreach, r-doparallel)
(r-domc, r-irlba, r-registry, r-e1071, r-bigmemory-sri, r-r-methodss3)
(r-tidyselect, r-base64, r-runit, r-sfsmisc, r-gtools, r-gdata, r-gplots)
(r-ztable, r-vipor, r-sourcetools, r-statmod, r-compquadform, r-mixtools)
(r-fastica, r-diptest, r-modeltools, r-flexmix, r-deoptimr, r-pcapp)
(r-rrcov, r-fit-models, r-robust, r-trimcluster, r-fpc, r-fnn)
(r-modelmetrics, r-nloptr, r-lme4, r-tclust, r-lubridate)[home-page]:
Likewise.
* gnu/packages/web.scm (r-htmltools, r-hwriter, r-rjson, r-rook)[home-page]:
Likewise.
* doc/guix.texi (Invoking guix import, Invoking guix refresh): Likewise.
2017-12-24 16:12:13 +01:00
Tobias Geerinckx-Rice
7459cb9305
services: messaging: Use HTTPS for prosody.im URLs.
* gnu/services/messaging.scm (prosody-configuration): Use HTTPS whenever
referring to prosody.im URLs in documentation.
* doc/guix.texi (Messaging Services): Likewise.
2017-12-24 16:12:12 +01:00
Tobias Geerinckx-Rice
90d8923bf9
doc: Properly escape brackets.
This fixes a build failure reported by Catonano <catonano@gmail.com>.

* doc/guix.texi (Mail Services): Escape ‘{’ and ‘}’ everywhere.
2017-12-23 15:40:43 +01:00
Tobias Geerinckx-Rice
28c03b4555
gnu: dovecot: Update to 2.3.0.
* gnu/packages/mail.scm (dovecot): Update to 2.3.0.
* gnu/services/mail.scm (dovecot-configuration)[director-doveadm-port]
[ssl-parameters-regenerate]: Delete fields.
[ssl-protocols]: Rename to...
[ssl-min-protocol]: ...this.
[mail-log-prefix, mdbox-rotate-size, ssl-cipher-list, imap-logout-format]:
Update default values.
* doc/guix.texi (Mail Services): Reflect the above changes to the service.
2017-12-23 07:11:14 +01:00
Ludovic Courtès
fae7973e1f
doc: Add "/guix" after LOCALSTATEDIR.
Fixes <https://bugs.gnu.org/29813>.
Reported by Martin Castillo <castilma@uni-bremen.de>.

* doc/guix.texi (Invoking guix-daemon, Invoking guix package): Add
missing "/guix" after LOCALSTATEDIR.
2017-12-23 00:05:05 +01:00
Ludovic Courtès
3e30cdf1c3
guix build: Support '--with-source=PACKAGE@VERSION=URI'.
* guix/scripts/build.scm (numeric-extension?, tarball-base-name): New
procedures, formerly in 'package-with-source'.
(transform-package-source)[new-sources]: Look for '=' in URI.  Each
element of the list of now a (PKG VERSION SOURCE) tuple.
Pass VERSION to 'package-with-source'.
(package-with-source): Add 'version' parameter and honor it.
* tests/scripts-build.scm ("options->transformation, with-source, PKG=URI")
("options->transformation, with-source, PKG@VER=URI"): New tests.
* doc/guix.texi (Package Transformation Options): Document the new
forms.
2017-12-23 00:05:05 +01:00
Ludovic Courtès
8faaf8d7cc
services: urandom-seed: Deprecate the 'urandom-seed-service' procedure.
* gnu/services/base.scm (urandom-seed-service-type)[default-value]: New
field.
(urandom-seed-service): Mark as deprecated.
(%base-services): Use URANDOM-SEED-SERVICE-TYPE directly.
* gnu/services/base.scm (%base-services):
* doc/guix.texi (Base Services): Document 'urandom-seed-service-type'
instead of 'urandom-seed-service'.
2017-12-22 08:56:50 +01:00
Ludovic Courtès
8785bd7759
doc: Document fixed-output derivations.
* doc/guix.texi (Derivations): Add paragraph on fixed-output
derivations.
2017-12-22 08:56:50 +01:00
Leo Famulari
9a56cf2b5b
services: urandom-seed: Try using a HWRNG to seed the Linux CRNG at boot.
* gnu/services/base.scm (urandom-seed-shepherd-service): Try to read from
'/dev/hwrng' at boot, as a supplement to any saved random seed.
* doc/guix.texi (Base Services): Document the new feature.
2017-12-19 11:31:24 -05:00
Ludovic Courtès
45f6211730
doc: Clarify treatment of the root account.
* doc/guix.texi (operating-system Reference): Clarify the situation of
UID 0.
2017-12-18 23:17:30 +01:00
Clément Lassieur
b05e8ee120
services: nginx: Allow to add raw content to the server blocks.
* doc/guix.texi (Web Services): Document 'raw-content'.
* gnu/services/web.scm (<nginx-server-configuration>)[raw-content]: New field.
(emit-nginx-server-config): Add it.
2017-12-18 12:03:14 +01:00
Clément Lassieur
8b223ceac4
services: nginx: Replace 'http-port' and 'https-port' with 'listen'.
* doc/guix.texi (Web Services, Version Control Services): Update accordingly.
* gnu/services/certbot.scm (certbot-nginx-server-configurations): Likewise.
* gnu/services/version-control.scm (%cgit-configuration-nginx): Likewise.
* gnu/services/web.scm (<nginx-server-configuration>,
emit-nginx-server-config): Likewise.
* gnu/tests/version-control.scm (%cgit-configuration-nginx,
%git-nginx-configuration): Likewise.
* gnu/tests/web.scm (%nginx-servers, %php-fpm-nginx-server-blocks): Likewise.
2017-12-18 12:03:14 +01:00
Martin Castillo
5a5d1a7f47
doc: Fix typo.
* doc/guix.texi: remove double occurence of generations.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-12-18 11:12:45 +01:00
Ricardo Wurmus
dafc3dafea
guix: offload: Add "status" sub-command.
* guix/scripts/offload.scm (check-machine-status): New procedure.
(guix-offload): Call it when the argument is "status".
* doc/guix.texi (Daemon Offload Setup): Document it.
2017-12-16 21:51:33 +01:00
Ricardo Wurmus
42cdcdff19
etc: Add snippets.
* etc/snippets/scheme-mode/guix-cvs-reference,
etc/snippets/scheme-mode/guix-git-reference,
etc/snippets/scheme-mode/guix-hg-reference,
etc/snippets/scheme-mode/guix-origin,
etc/snippets/scheme-mode/guix-package,
etc/snippets/scheme-mode/guix-svn-reference,
etc/snippets/text-mode/guix-commit-message-add-package,
etc/snippets/text-mode/guix-commit-message-update-package: New files.
* doc/contributing.texi (The Perfect Setup): Document snippets.
2017-12-15 23:15:32 +01:00
Mathieu Othacehe
5a72ddf176
scripts: system: Add --expression option.
* guix/scripts/system.scm (show-help): Add expression option.
(%options): Ditto.
(guix-system): Allow commands taking a file as an argument to use an
expression instead.
(process-action): Read operating-system from expression or file.
* doc/guix.texi (Invoking guix system): Introduce the expression option.
2017-12-15 12:15:15 +01:00
Oleg Pykhalov
dfb403b053
doc: Fix typo.
* doc/guix.texi (DNS Services): Fix knot-configuration.
2017-12-15 12:47:28 +03:00
Tobias Geerinckx-Rice
27c50d87f5
doc: Fix typo.
* doc/guix.texi: Add missing ‘@*’ to copyright headers.
2017-12-12 22:35:37 +01:00
nee
64bae7237c
gnu: services: Add php-fpm.
* gnu/services/web.scm (<php-fpm-configuration>,
  <php-fpm-process-manager-configuration>): New record types.
  (php-fpm-configuration?,
   php-fpm-process-manager-configuration?,
   php-fpm-service-type,
   nginx-php-location): New procedures.
* doc/guix.texi (Web-Services): Document php-fpm service.
* gnu/tests/web.scm: Add php-fpm system test.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2017-12-12 21:29:39 +00:00
Christopher Baines
2881f85220
services: web: Add support for configuring the nginx server names hash.
The nginx service can fail to start if the server names hash bucket size is
too small, which can happen on some systems, and when using QEMU, depending on
the CPU.

* gnu/services/web.scm (<nginx-configuration>): Add
  server-names-hash-bucket-size and server-names-hash-bucket-max-size.
  (default-nginx-config): Add support for the new hash bucket size parameters.
  (nginx-service, nginx-activation): Pass the new hash bucket size parameters
  through to the default-nginx-config procedure.
* doc/guix.texi (Web Services): Document the new hash bucket size parameters.
2017-12-11 20:57:34 +00:00
Christopher Baines
c48aa70a9a
services: web: Remove default certificate and key files for nginx.
If nginx is configured with a ssl-certificate file, and ssl-certificate-key,
it will fail to start unless these exist. To avoid this happening, change the
default to #f.

* gnu/services/web.scm (<nginx-server-configuration>)
  [ssl-certificate,ssl-certificate-key]: Set the defaults to #f.
* gnu/tests/web.scm (%nginx-servers): Remove redundant
  nginx-server-configuration fields.
* doc/guix.texi (Web Services): Update examples and documentation.
2017-12-11 20:36:43 +00:00
Tobias Geerinckx-Rice
08c597d7e0
doc: Fix typo.
* doc/guix.texi (Package Management): Fix typo.
2017-12-08 23:24:07 +01:00
Tobias Geerinckx-Rice
ecb28e6440
doc: Update metacpan.org API endpoint.
* doc/guix.texi (Invoking guix import): Match the URI actually used by the
updater.
2017-12-07 02:57:28 +01:00
Tobias Geerinckx-Rice
fdfdecdb7e
gnu, doc, tests: Use ‘bootloader-configuration’ everywhere.
* doc/guix.texi (Proceeding with the Installation): Replace the old-style
‘grub-configuration’ with the newer ‘bootloader-configuration’ syntax.
* gnu/system/examples/vm-image.tmpl: Likewise.
* gnu/system/install.scm (installation-os): Likewise.
* gnu/tests.scm (%simple-os): Likewise.
* gnu/tests/install.scm (%minimal-os, %minimal-os-on-vda, %separate-home-os)
(%separate-store-os, %raid-root-os, %encrypted-root-os, %btrfs-root-os):
Likewise.
* gnu/tests/nfs.scm (%base-os): Likewise.
* tests/guix-system.scm (OS_BASE, make_user_config): Likewise.
* tests/system.scm (%os, %os-with-mapped-device): Likewise.
2017-12-06 15:02:24 +01:00
Ludovic Courtès
39b27f4eae
doc: Mention berlin.guixsd.org.
* doc/guix.texi (Substitute Server Authorization): Add note about
berlin.guixsd.org.  Nitpick.
2017-12-04 18:14:28 +01:00
Ludovic Courtès
3b6e7c703c
maint: Add the '.iso' extension to installation images.
* Makefile.am (release): Add the '.iso' suffix to image files.
* doc/guix.texi (USB Stick and DVD Installation): Adjust accordingly.
2017-12-04 16:35:43 +01:00
Ludovic Courtès
2626062b25
doc: Merge "USB Stick Installation" and "DVD Installation".
* doc/guix.texi (USB Stick Installation): Rename to...
(USB Stick and DVD Installation): ... this.  Merge contents with...
(DVD Installation): ... this node.  Remove.
2017-12-04 16:35:43 +01:00
Ludovic Courtès
350cb5ba84
doc: Link to work on bootstrapping.
* doc/guix.texi (Reducing the Set of Bootstrap Binaries): New section.
2017-12-03 19:12:16 +01:00
Kei Kebreau
9ce07f2dba
doc: Update the example VCS snapshot package definition.
In commit ee17a9e06e, the helpers git-version
and git-file-name removed the need to build version and file name strings
manually for packages that use VCS snapshots.

doc/guix.texi (Version Numbers): Use git-version and git-file-name.
2017-11-30 12:19:29 -05:00
Arun Isaac
3d0aa7f70b
build-system: Add scons-build-system.
* guix/build-system/scons.scm: New file.
* guix/build/scons-build-system.scm: New file.
* Makefile.am (MODULES): Register them.
* doc/guix.texi (Build Systems): Add scons-build-system.
2017-11-30 18:19:31 +05:30
Ludovic Courtès
d65d7759f0
doc: Give the absolute file name of 'hydra.gnu.org.pub' in snippets.
* doc/guix.texi (Substitute Server Authorization): Give the absolute
file name of 'hydra.gnu.org.pub' in the snippet.
2017-11-30 10:34:04 +01:00
Ludovic Courtès
a912c723f7
gexp: 'compiled-modules' disables deprecation warnings by default.
This avoids repeated deprecation messages, particularly while running
'guix system build' or similar.

* guix/gexp.scm (gexp->derivation): Add #:deprecation-warnings.  Pass it
to 'compiled-modules'.
(compiled-modules): Add #:deprecation-warnings and honor it.
* doc/guix.texi (G-Expressions): Update 'gexp->derivation'
documentation.
* guix/packages.scm (patch-and-repack): Pass #:deprecation-warnings #t.
2017-11-29 16:44:54 +01:00
Andy Wingo
410349347a
services: Add Git HTTP(S) service support.
* doc/guix.texi (Version Control Services): Add documentation on the HTTP
backend for git.
* gnu/services/version-control.scm (<git-http-configuration>): New data type.
(git-http-nginx-location-configuration): New helper function.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-11-28 23:34:25 +01:00
Andy Wingo
05f1cb3cda
doc: Create "Version Control Services" section.
* doc/guix.texi (Version Control Services): Move to its own node.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-11-28 23:34:24 +01:00
Andy Wingo
1115f14017
services: Add certbot service.
* gnu/services/certbot.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add new file.
* doc/guix.texi (Certificate Services): New section.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-11-28 23:34:24 +01:00
Ludovic Courtès
65c0f43649
services: xorg: Remove WindowMaker as a default fallback.
* gnu/services/xorg.scm (xinitrc)[builder](system-profile)
(user-profile): New variables.
(xsession-command, find-session): New procedures.
When FALLBACK-SESSION is #f, find a valid session at run time.
* doc/guix.texi (X Window): Adjust accordingly, and insist that one
or more window managers must be installed.
2017-11-28 11:24:46 +01:00
Ludovic Courtès
b37f86d7a3
services: xorg: Document 'slim-configuration' and deprecate 'slim-service'.
* gnu/services/xorg.scm (<slim-configuration>): Provide default values
for all fields.
(slim-service-type)[default-value]: New field.
* doc/guix.texi (X Window): Remove 'slim-service' documentation.
Document 'slim-service-type' and 'slim-configuration'.
* gnu/services/desktop.scm (%desktop-services): Use 'slim-service-type'.
2017-11-28 11:24:45 +01:00
Ludovic Courtès
d344f5a528
services: xorg: Allow users to specify a list of modules.
* gnu/services/xorg.scm (%default-xorg-fonts): New variable.
(xorg-configuration-file): Add #:modules and #:fonts.  Rewrite to return
a 'computed-file' that honors MODULES and FONTS.
(xorg-wrapper): Pass #:modules to 'xorg-configuration-file'.
(xorg-start-command): Add #:fonts.  Pass #:fonts and #:modules to
'xorg-configuration-file'.
* doc/guix.texi (X Window): Adjust documentation of 'xorg-start-command'
and 'xorg-configuration-file'.
2017-11-28 10:46:03 +01:00
Clément Lassieur
19ff1f2687
services: configuration: Show default values of list types.
* doc/guix.texi (Messaging Services): Regenerate it.
* gnu/services/configuration.scm (show-default?): Check VAL rather than DEFAULT.
* gnu/services/messaging.scm (show-default?): Check VAL rather than DEFAULT.
(prosody-configuration)[modules-enabled]: Remove default value from docstring.
2017-11-28 03:49:47 +01:00
Clément Lassieur
e30038dae1
services: prosody: Add support for disable-sasl-mechanisms.
* doc/guix.texi (Messaging Services): Update accordingly.
* gnu/services/messaging.scm (prosody-configuration)[disable-sasl-mechanisms]:
New field.
2017-11-26 15:30:57 +01:00
Clément Lassieur
274b9500d1
services: prosody: Allow to add raw content to the config file.
* doc/guix.texi (Messaging Services): Update accordingly.
* gnu/services/messaging.scm (prosody-configuration)[raw-content]: New field.
(raw-content?, serialize-raw-content): New procedures.
2017-11-26 15:30:57 +01:00
Clément Lassieur
1f6f1a07c8
services: prosody: Add support for http-max-content-size.
* doc/guix.texi (Messaging Services): Update accordingly.
* gnu/services/messaging.scm (prosody-configuration)[http-max-content-size]:
New field.
2017-11-26 15:30:57 +01:00
Clément Lassieur
f59de6bea9
services: prosody: Add support for http-external-url.
* doc/guix.texi (Messaging Services): Update accordingly.
* gnu/services/messaging.scm (prosody-configuration)[http-external-url]: New
field.
2017-11-26 15:30:56 +01:00
Clément Lassieur
5cc6dcd734
services: prosody: Adapt to Prosody 0.10.0.
* doc/guix.texi (Messaging Services): Add "mam" as a module example.  Document
'prosodyctl check'.  Replace 'prosodyctl cert request' with 'prosodyctl cert
import'.  Regenerate it.
* gnu/services/messaging.scm (serialize-module-list): Remove "posix" from the
default modules list because it is now automatically loaded.
(ssl-configuration)[key, certificate]: Remove them because they are now
automatically located.  Fix their docstrings.
(%default-modules-enabled): Add "carbons" and "blocklist".
(prosody-configuration)[certificates]: Set default directory from which
certificates/keys will be automatically located.
2017-11-26 15:30:56 +01:00
Tobias Geerinckx-Rice
68b49109a0
doc: Fix typo.
* doc/guix.texi (Bootloader Configuration): Fix ‘choosen’ typo.
2017-11-24 19:05:00 +01:00
Ludovic Courtès
be10e4ae4a
doc: Update package count.
* doc/guix.texi (Limitations): Update package count.
2017-11-23 22:38:11 +01:00
Chris Marusich
77f921587c
doc: Split the "Substitutes" section into subsections.
* doc/guix.texi (Substitutes): Move information into sections, and create one
  new subsection regarding substitution failure.
  (Top): In the detailed listing, add entries for the new subsections.
  (Official Substitute Server): Move info about hydra here.  Add information
  that explains when substitutes are enabled by default.
  (Substitute Server Authorization): Move information about how to enable or
  disable substitutes here.
  (Substitute Authentication): Move information about how Guix authenticates
  substitutes here.
  (Proxy Settings): Move information about how to download substitutes via
  proxy here.
  (Substitution Failure): New section.  Add information about how Guix handles
  substitution failure.  Be extra clear about behavior concerning --fallback.
  (On Trusting Binaries): Move information about trusting binaries here.
  (Invoking guix-daemon): Remove an incorrect statement about when substitutes
  are enabled by default.
  (Common Build Options): Add cross-references for the --fallback option.

Co-authored-by: George Clemmer <myglc2@gmail.com>
2017-11-21 20:15:39 -08:00
Ludovic Courtès
bd7e136d29
Add semicolon in commands that set GUIX_PROFILE.
Fixes <https://bugs.gnu.org/28223>.
Reported by Rosebud Uplink <Uplink.Introversion@outlook.com>.

* doc/guix.texi (Binary Installation): Add missing semicolon after
'GUIX_PROFILE=' line.
(Invoking guix package): Likewise.
* gnu/system.scm (operating-system-etc-service)[profile]: Likewise.
* guix/build/profiles.scm (build-etc/profile): Likewise.
2017-11-20 18:43:10 +01:00
Marco van Hulten
45eee2dd62
doc: Write "file system" instead of "partition" as appopriate.
* doc/guix.texi (Preparing for Installation): Write "file system" instead
of "partition" as appopriate.
2017-11-17 23:04:52 +01:00
Ludovic Courtès
a0fea77dbb
services: guix: Remove dependency on 'lsof'.
This is a followup to b8f59cdc20:
'list-runtime-roots' no longer depends on 'lsof'.

* gnu/services/base.scm (<guix-configuration>)[lsof]: Remove.
(guix-shepherd-service): Adjust accordingly.
* doc/guix.texi (Base Services): Adjust accordingly.
* gnu/system.scm (%base-packages): Remove LSOF.
2017-11-13 11:36:28 +01:00
Ludovic Courtès
6a98b9f34e
doc: Better explain GC roots.
Fixes <https://bugs.gnu.org/24194>.
Reported by J. Eppler <j.eppler@openmailbox.org>.

* doc/guix.texi (Invoking guix-daemon): Add index entries for GC roots.
Add xref to "Invoking guix gc".
(Invoking guix gc): Add the string "GC roots"; mention /var/guix/gcroots.
(Additional Build Options): Add index entries.  Better explain --root.
(Invoking guix environment): Add xref to "Invoking guix gc".
2017-11-12 22:42:17 +01:00
Ricardo Wurmus
308c08d371
doc: Move paragraph about signature verification to the top.
* doc/contributing.texi (Submitting Patches): Remind contributors to verify
cryptographic signatures at the very beginning.
2017-11-08 17:19:45 +01:00
nee
b6d2930d1f
services: Add murmur.
* gnu/services/telephony.scm: New file.
* gnu/local.mk: Add it.
* doc/guix.texi (Telephony Services): New node.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-11-05 15:21:53 +01:00
Leo Famulari
fff236aa03
doc: Fix typo in documentation of 'guix graph'.
* doc/guix.texi (Invoking guix graph): Fix typo.
2017-11-01 17:14:09 -04:00
Leo Famulari
9c43f432eb
doc: Document the installation of Go source code.
* doc/guix.texi (Build Systems): Document '#:install-source?' for the Go
build system.
2017-10-26 12:14:34 -04:00
Ludovic Courtès
bf7dfb1f07
challenge: Display an overall summary.
* guix/scripts/challenge.scm (summarize-report-list): New procedure.
(guix-challenge): Use it.
* doc/guix.texi (Invoking guix challenge): Adjust command output in
example.
2017-10-25 22:25:19 -07:00
Ludovic Courtès
d298c815e6
gexp: Add 'directory-union'.
* gnu/services.scm (directory-union): Move to...
* guix/gexp.scm (directory-union): ... here.  New procedure.
* doc/guix.texi (G-Expressions): Document it.
2017-10-22 22:09:00 -07:00
Ludovic Courtès
dedb512f8f
gexp: Add 'file-union'.
* gnu/services.scm (file-union): Move to...
* guix/gexp.scm (file-union): ... here.  New procedure.
* doc/guix.texi (G-Expressions): Document it.
2017-10-22 22:09:00 -07:00
Maxim Cournoyer
6e644cfdb3
services: base: Add file->udev-rule function.
This function allows passing a file-like object to the udev service.

* gnu/services/base.scm (file->udev-rule): New function.
* doc/guix.texi (Base Services): Document it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-10-22 22:09:00 -07:00
Hartmut Goebel
ed26b3a807
doc: Clarify description of etc-service-type.
* doc/guix.texi (Service Reference): Update 'etc-service-type'
  documentation.
2017-10-22 12:47:29 +02:00
Tobias Geerinckx-Rice
5713bbf157
Use HTTPS for bioconductor.org.
* doc/guix.texi (Invoking guix import, Invoking guix refresh): Use HTTPS for
bioconductor.org URLs.
* gnu/packages/bioinformatics.scm (r-annotate, r-geneplotter, r-genefilter)
(r-deseq2, r-dexseq, r-annotationforge, r-rbgl, r-gseabase, r-category)
(r-gostats, r-shortread, r-biocgenerics, r-biocinstaller, r-biocviews)
(r-biocstyle, r-bioccheck, r-s4vectors, r-iranges, r-genomeinfodbdata)
(r-genomeinfodb, r-xvector, r-genomicranges, r-biobase, r-annotationdbi)
(r-biomart, r-biocparallel, r-biostrings, r-rsamtools, r-delayedarray)
(r-summarizedexperiment, r-genomicalignments, r-rtracklayer)
(r-genomicfeatures, r-graph, r-topgo, r-bsgenome, r-impute, r-seqpattern)
(r-seqlogo, r-motifrg, r-bamsignals, r-mutationalpatterns, r-tximport)
(r-rhdf5, r-chipseq, r-sva, r-affy, r-vsn, r-mzid, r-msnid)
(r-interactivedisplaybase, r-annotationhub)[home-page]: Likewise.
* gnu/packages/bioinformatics.scm (r-txdb-hsapiens-ucsc-hg19-knowngene)
(r-go-db, r-bsgenome-hsapiens-1000genomes-hs37d5, r-org-hs-eg-db)
(r-org-ce-eg-db, r-org-dm-eg-db, r-org-mm-eg-db)
(r-bsgenome-hsapiens-ucsc-hg19, r-bsgenome-mmusculus-ucsc-mm9)
(r-bsgenome-mmusculus-ucsc-mm10, r-txdb-mmusculus-ucsc-mm10-knowngene)
(r-bsgenome-celegans-ucsc-ce6, r-bsgenome-celegans-ucsc-ce10)
(r-bsgenome-dmelanogaster-ucsc-dm3, r-copyhelper)[source, home-page]:
Likewise.
* gnu/packages/statistics.scm (r-rcurl)[source]: Likewise.
* guix/build-system/r.scm (bioconductor-uri): Likewise.
* guix/import/cran.scm (%cran-url, bioconductor-package?)
(bioconductor-data-package?, bioconductor-experiment-package?): Likewise.
2017-10-21 17:43:40 +02:00