Commit graph

605 commits

Author SHA1 Message Date
Ricardo Wurmus
ff1146b9b1
gnu: Add r-curatedtcgadata.
* gnu/packages/bioconductor.scm (r-curatedtcgadata): New variable.
2019-12-18 15:29:07 +01:00
Ricardo Wurmus
6f15ea2415
gnu: Add r-reactome-db.
* gnu/packages/bioconductor.scm (r-reactome-db): New variable.
2019-12-18 15:29:07 +01:00
Ricardo Wurmus
29fd736a66
gnu: Add r-biobroom.
* gnu/packages/bioconductor.scm (r-biobroom): New variable.
2019-12-17 20:02:18 +01:00
Ricardo Wurmus
48bcbef07a
gnu: Add r-bioassayr.
* gnu/packages/bioconductor.scm (r-bioassayr): New variable.
2019-12-17 20:02:18 +01:00
Ricardo Wurmus
991554fc92
gnu: Add r-chemminer.
* gnu/packages/bioconductor.scm (r-chemminer): New variable.
2019-12-17 20:02:18 +01:00
Ricardo Wurmus
d38775b13f
gnu: Add r-bigpint.
* gnu/packages/bioconductor.scm (r-bigpint): New variable.
2019-12-17 20:02:18 +01:00
Ricardo Wurmus
820373dbc8
gnu: Add r-bigmemoryextras.
* gnu/packages/bioconductor.scm (r-bigmemoryextras): New variable.
2019-12-17 20:02:18 +01:00
Ricardo Wurmus
6ca6f8663b
gnu: Add r-biggr.
* gnu/packages/bioconductor.scm (r-biggr): New variable.
2019-12-17 20:02:17 +01:00
Ricardo Wurmus
5aef09bd0e
gnu: Add r-hyperdraw.
* gnu/packages/bioconductor.scm (r-hyperdraw): New variable.
2019-12-17 20:02:17 +01:00
Ricardo Wurmus
75a8bb3185
gnu: Add r-hypergraph.
* gnu/packages/bioconductor.scm (r-hypergraph): New variable.
2019-12-17 20:02:17 +01:00
Ricardo Wurmus
e823337c6e
gnu: Add r-rsbml.
* gnu/packages/bioconductor.scm (r-rsbml): New variable.
2019-12-17 20:02:17 +01:00
Ricardo Wurmus
40fe63ad8a
gnu: Add r-bifet.
* gnu/packages/bioconductor.scm (r-bifet): New variable.
2019-12-17 20:02:17 +01:00
Ricardo Wurmus
de9374b73c
gnu: Add r-bicare.
* gnu/packages/bioconductor.scm (r-bicare): New variable.
2019-12-17 20:02:17 +01:00
Ricardo Wurmus
6bd50acf41
gnu: Add r-bhc.
* gnu/packages/bioconductor.scm (r-bhc): New variable.
2019-12-17 20:02:16 +01:00
Ricardo Wurmus
75eb1149f3
gnu: Add r-bgx.
* gnu/packages/bioconductor.scm (r-bgx): New variable.
2019-12-17 20:02:16 +01:00
Ricardo Wurmus
d11d6feafa
gnu: Add r-bgmix.
* gnu/packages/bioconductor.scm (r-bgmix): New variable.
2019-12-17 20:02:16 +01:00
Ricardo Wurmus
6e10ac0780
gnu: r-destiny: Update to 3.0.0.
* gnu/packages/bioconductor.scm (r-destiny): Update to 3.0.0.
[propagated-inputs]: Add r-ggplot-multistats, r-irlba, r-knn-covertree,
r-pcamethods, r-rcpphnsw, r-rspectra, r-singlecellexperiment, r-tidyr, and
r-tidyselect; remove r-igraph.
2019-12-15 15:39:13 +01:00
Ricardo Wurmus
b4ee414880
gnu: r-siggenes: Update to 1.60.0.
* gnu/packages/bioconductor.scm (r-siggenes): Update to 1.60.0.
2019-12-15 15:39:13 +01:00
Ricardo Wurmus
4efdac562b
gnu: r-bumphunter: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-bumphunter): Update to 1.28.0.
2019-12-15 15:39:13 +01:00
Ricardo Wurmus
dfd4287cba
gnu: r-minfi: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-minfi): Update to 1.32.0.
2019-12-15 15:39:13 +01:00
Ricardo Wurmus
b57cffb974
gnu: r-methylumi: Update to 2.32.0.
* gnu/packages/bioconductor.scm (r-methylumi): Update to 2.32.0.
2019-12-15 15:39:13 +01:00
Ricardo Wurmus
8f7bc872e1
gnu: r-lumi: Update to 2.38.0.
* gnu/packages/bioconductor.scm (r-lumi): Update to 2.38.0.
2019-12-15 15:39:13 +01:00
Ricardo Wurmus
a2877d6970
gnu: r-linnorm: Update to 2.10.0.
* gnu/packages/bioconductor.scm (r-linnorm): Update to 2.10.0.
2019-12-15 15:39:12 +01:00
Ricardo Wurmus
1b890c3231
gnu: r-ioniser: Update to 2.10.0.
* gnu/packages/bioconductor.scm (r-ioniser): Update to 2.10.0.
2019-12-15 15:39:12 +01:00
Ricardo Wurmus
a18f325e0a
gnu: r-triform: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-triform): Update to 1.28.0.
2019-12-15 15:39:12 +01:00
Ricardo Wurmus
9b72bbf784
gnu: r-varianttools: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-varianttools): Update to 1.28.0.
2019-12-15 15:39:12 +01:00
Ricardo Wurmus
9f218627d6
gnu: r-heatplus: Update to 2.32.0.
* gnu/packages/bioconductor.scm (r-heatplus): Update to 2.32.0.
2019-12-15 15:39:12 +01:00
Ricardo Wurmus
c245ec3d49
gnu: r-gosemsim: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.12.0.
2019-12-15 15:39:12 +01:00
Ricardo Wurmus
5ed767521c
gnu: r-anota: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-anota): Update to 1.34.0.
2019-12-15 15:39:12 +01:00
Ricardo Wurmus
869965df1c
gnu: r-sigpathway: Update to 1.54.0.
* gnu/packages/bioconductor.scm (r-sigpathway): Update to 1.54.0.
2019-12-15 15:39:12 +01:00
Ricardo Wurmus
b4e1268c7b
gnu: r-fgsea: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-fgsea): Update to 1.12.0.
2019-12-15 15:39:12 +01:00
Ricardo Wurmus
166b3c2da6
gnu: r-dose: Update to 3.12.0.
* gnu/packages/bioconductor.scm (r-dose): Update to 3.12.0.
2019-12-15 15:39:12 +01:00
Ricardo Wurmus
0654a9bc3b
gnu: r-enrichplot: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.6.0.
[propagated-inputs]: Remove r-upsetr.
2019-12-15 15:39:11 +01:00
Ricardo Wurmus
08c01b7e0e
gnu: r-clusterprofiler: Update to 3.14.0.
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 3.14.0.
2019-12-15 15:39:11 +01:00
Ricardo Wurmus
6374984a20
gnu: r-mlinterfaces: Update to 1.66.0.
* gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.66.0.
2019-12-15 15:39:11 +01:00
Ricardo Wurmus
fc4a9dd579
gnu: r-annaffy: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-annaffy): Update to 1.58.0.
2019-12-15 15:39:11 +01:00
Ricardo Wurmus
4ed18ddc0f
gnu: r-a4core: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-a4core): Update to 1.34.0.
2019-12-15 15:39:11 +01:00
Ricardo Wurmus
102b982cbe
gnu: r-a4classif: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-a4classif): Update to 1.34.0.
2019-12-15 15:39:11 +01:00
Ricardo Wurmus
d6859c7c9b
gnu: r-a4preproc: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-a4preproc): Update to 1.34.0.
2019-12-15 15:39:11 +01:00
Ricardo Wurmus
977a7802c1
gnu: r-a4reporting: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-a4reporting): Update to 1.34.0.
2019-12-15 15:39:11 +01:00
Ricardo Wurmus
85c945aa97
gnu: r-a4base: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-a4base): Update to 1.34.0.
2019-12-15 15:39:11 +01:00
Ricardo Wurmus
344eb4c404
gnu: r-a4: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-a4): Update to 1.34.0.
2019-12-15 15:39:11 +01:00
Ricardo Wurmus
aef4b34669
gnu: r-abseqr: Update to 1.4.0.
* gnu/packages/bioconductor.scm (r-abseqr): Update to 1.4.0.
2019-12-15 15:39:10 +01:00
Ricardo Wurmus
32b471f4a7
gnu: r-bacon: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-bacon): Update to 1.14.0.
2019-12-15 15:39:10 +01:00
Ricardo Wurmus
6dfe5056c9
gnu: r-rgadem: Update to 2.34.0.
* gnu/packages/bioconductor.scm (r-rgadem): Update to 2.34.0.
2019-12-15 15:39:10 +01:00
Ricardo Wurmus
35a1b3ec4c
gnu: r-motiv: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-motiv): Update to 1.42.0.
[propagated-inputs]: Add r-genomicranges.
2019-12-15 15:39:10 +01:00
Ricardo Wurmus
dda936ca9a
gnu: r-motifstack: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-motifstack): Update to 1.30.0.
[propagated-inputs]: Add r-ggplot2.
2019-12-15 15:39:10 +01:00
Ricardo Wurmus
e89f16e646
gnu: r-genomicscores: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-genomicscores): Update to 1.10.0.
2019-12-15 15:39:10 +01:00
Ricardo Wurmus
36aecb2105
gnu: r-atacseqqc: Update to 1.10.1.
* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.10.1.
2019-12-15 15:39:10 +01:00
Ricardo Wurmus
4997e0254a
gnu: r-gofuncr: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-gofuncr): Update to 1.6.0.
2019-12-15 15:39:10 +01:00