* gnu/packages/algebra.scm (python-flint): New variable.
* gnu/packages/patches/python-flint-includes.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register the patch.
* gnu/packages/patches/pugixml-versioned-libdir.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/xml.scm (pugixml)[source](patches): New field.
[arguments]: Instruct the build system to create a shared rather than static
library.
[native-inputs]: Add PKG-CONFIG.
The (gnu system accounts) module is meant to be used both on the build-
and on the host-side.
* gnu/system/shadow.scm <top level>: Call 'default-shell'.
(<user-account>, <user-group>): Move to...
* gnu/system/accounts.scm: ... here. New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add system/accounts.scm.
* gnu/packages/patches/python-pytest-pluggy-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/check.scm (python-pytest): Update to 4.3.0.
[source](patches): New field.
[arguments]: Skip five new tests. Disable tests by passing them as arguments.
* gnu/packages/tls.scm (openssl)[replacement]: New field.
(openssl/fixed): New variable.
(openssl-next)[inherit]: Inherit from it instead.
* gnu/packages/patches/openssl-CVE-2019-1559.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/music.scm (musescore): Update to 3.0.3.
[source]: Remove now obsolete patch.
[arguments]: Do not use bundled (as a submodule) libcrashreporter-qt.
* gnu/packages/patches/musescore-fix-use_webengine.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Apply file removal.
* gnu/packages/multiprecision.scm (libtommath): New variable.
* gnu/packages/patches/libtommath.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/patches/clang-7.0-libc-search-path.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/llvm.scm (llvm, clang-runtime, clang): Update to 7.0.1.
(llvm-7.0.1): Remove variable.
(clang-from-llvm)[arguments]: Adjust phase to match Clang 7.
(llvm-6, clang-runtime-6, clang-6): New public variables.
* gnu/packages/dlang.scm (ldc)[native-inputs]: Change LLVM and CLANG to
LLVM-6.0 and CLANG-6.0.
* gnu/packages/gl.scm (mesa)[inputs]: Change from LLVM to LLVM-6.
Patch ruby-safe-yaml to fix an issue that would lead to an error like this:
uninitialized constant SafeYAML::Parse::Date::DateTime
It's been reported upstream [1], and this patch was taken from the upstream Git
repository.
1: https://github.com/dtao/safe_yaml/issues/80
* gnu/packages/ruby.scm (ruby-safe-yaml)[source]: Switch to the Git repository
so that applying patches works and add a patch.
[arguments]: Enable tests and add a phase to set the TZ environment variable,
as one of the tests depends on a certian timezone.
* gnu/packages/patches/ruby-safe-yaml-add-require-time.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add new patch file.
* gnu/packages/patches/dealii-mpi-deprecations.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/maths.scm (dealii)[source]: Upgrade to 9.0.1. Use patch.
[arguments]: Use new MPI configuration flags.
* gnu/packages/patches/scalapack-blacs-mpi-deprecations.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/maths.scm (scalapack)[source]: Use it.
macro compiler plugin.
* gnu/packages/patches/mrustc-0.8.0-fix-variable-length-integer-receiving.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/rust.scm (mrustc)[source]: Use it.
Co-authored-by: Chris Marusich <cmmarusich@gmail.com>
Add a patch from the upstream repository [1] that resolves some errors that
prevent the package from building [2].
1: https://github.com/red-eclipse/base/commit/b16b4963c1ad81bb9ef784bc49
2: error: ‘____gammal_r_finite’ was not declared in this scope
* gnu/packages/games.scm (red-eclipse)[source] Add patch.
* gnu/packages/patches/red-eclipse-remove-gamma-name-hack.patch: New file
* gnu/local.mk (dist_patch_DATA): Add new patch.
* gnu/packages/kde.scm (libkscreen, libksysguard): Move from here ...
* gnu/packages/kde-plasma.scm: ... to here. New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
* gnu/packages/virtualization.scm (runc): Update to 1.0.0-rc6.
[source]: Use a descriptive file-name. Add 'runc-CVE-2019-5736.patch'
* gnu/packages/patches/runc-CVE-2019-5736.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/patches/aspell-gcc-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/aspell.scm (aspell)[source](patches): Use it.
* gnu/packages/patches/superlu-dist-fix-mpi-deprecations.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/maths.scm (superlu-dist)[source]: Use it.
This is a followup to commit 564cf93f2a.
* gnu/packages/patches/ocaml-graph-honor-source-date-epoch.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
This is a followup to commit bff6739d5e.
* gnu/packages/patches/ocaml-findlib-make-install.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
This is a followup to commit 47415332d7.
* gnu/packages/patches/openldap-CVE-2017-9287.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
This is a followup to commit 67d527e35e.
* gnu/packages/patches/glibc-memchr-overflow-i686.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
This is a followup to commit 28f4d56dd3.
* gnu/packages/patches/ao-cad-aarch64-support.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
This patch was introduced in commit ae12d58627,
but it was never used.
See <https://bugs.gnu.org/26581> for more information.
* gnu/packages/patches/readline-7.0-mingw.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/gnuzilla.scm (computed-origin-method): New variable.
(%icecat-version, icecat-source): New variables.
* gnu/packages/patches/icecat-makeicecat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
Add a patch to skip more tests that require the network. Along with some other
changes, this gets all but of one of the tests passing.
The remaining test is broken due to a problem with the Python package in Guix,
which is fixed by [1] which is currently on the core-updates branch. This
patch doesn't work on core-updates due to python2-miniboa not being present.
1: d453b0e11d
* gnu/packages/python.scm (linkchecker)[source]: Add patch.
[native-inputs]: Add more inputs required for the tests.
[arguments]: Enable the tests, move the 'check phase after 'install. Test
using the installed software, and use py.test.
* gnu/packages/patches/superlu-dist-awpm-grid.patch: New file.
* gnu/packages/maths.scm (superlu-dist)[source]: Upgrade to 6.0.0. Remove
extraneous 'use-modules' in snippet.
[build-system]: Change to cmake-build-system.
[propagated-inputs]: Replace pt-scotch with pt-scotch32 to match integer
sizes. Add "parmetis" input, from pt-scotch32. Move lapack to ...
[inputs]: ...here. Add openblas and combinatorial-blas.
[arguments]: Replace 'configure' phase with #:configure-flags. Add
'set-c++-standard' and 'omp-setup' phases. Remove
'create-install-directories, 'check', and 'install' phases, which are now
handled by cmake.
* gnu/local.mk (dist_patch_DATA): Add patch.
The qof test is also reinstated; it was failing because the needed locales
were not installed.
* gnu/packages/patches/gnucash-disable-failing-tests.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Unregister it.
* gnu/packages/gnucash.scm (gnucash)[patches]: Remove it.
[phases]{disable-stress-options-test}: Implement it using SUBSTITUTES*.
{install-locales}: New phase.
* gnu/packages/patches/gnucash-price-quotes-perl.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Unregister it.
* gnu/packages/gnucash.scm (gnucash)[patches]: Remove it.
[phases]{fix-finance-quote-check}: Implement it using SUBSTITUTES*.
* gnu/packages/patches/openssh-CVE-2018-20685.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/ssh.scm (openssh)[source]: Use it.
* gnu/installer/hostname.scm: New file.
* gnu/installer.scm (installer-program): Use new module above.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add new file.
* po/guix/POTFILES.in: Add new file.
* gnu/installer.scm: Rename to ...
* gnu/installer/record.scm: ... this.
* gnu/installer/build-installer.scm: Move everything to the build side and
rename to gnu/installer.scm.
* gnu/installer/newt.scm: Remove all the gexps and add depencies to newt
modules as this code will only be used on the build side by now.
* gnu/local.mk (GNU_SYSTEM_MODULES): Adapt it,
(dist_installer_DATA): New rule to install installer's aux-files.
* gnu/system/install.scm (%installation-services): Use only
'installer-program' from (gnu installer). The installer is now choosen on the
build side.
* guix/self.scm (*system-modules*): Restore previous behaviour and add all
installer files to #:extra-files field of the scheme-node.
* po/guix/POTFILES.in: Adapt it.
Only build installer if "--enable-installer" is passed. In that case only, the
support for Guile-newt becomes mandatory.
* configure.ac: Add --enable-installer argument. Export ENABLE_INSTALLER
conditional according to the argument value.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove installer modules and build them
only if ENABLE_INSTALLER is set.
* configure.ac: Require that guile-newt is available.
* gnu/installer.scm: New file.
* gnu/installer/aux-files/logo.txt: New file.
* gnu/installer/build-installer.scm: New file.
* gnu/installer/connman.scm: New file.
* gnu/installer/keymap.scm: New file.
* gnu/installer/locale.scm: New file.
* gnu/installer/newt.scm: New file.
* gnu/installer/newt/ethernet.scm: New file.
* gnu/installer/newt/hostname.scm: New file.
* gnu/installer/newt/keymap.scm: New file.
* gnu/installer/newt/locale.scm: New file.
* gnu/installer/newt/menu.scm: New file.
* gnu/installer/newt/network.scm: New file.
* gnu/installer/newt/page.scm: New file.
* gnu/installer/newt/timezone.scm: New file.
* gnu/installer/newt/user.scm: New file.
* gnu/installer/newt/utils.scm: New file.
* gnu/installer/newt/welcome.scm: New file.
* gnu/installer/newt/wifi.scm: New file.
* gnu/installer/steps.scm: New file.
* gnu/installer/timezone.scm: New file.
* gnu/installer/utils.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add previous files.
* gnu/system.scm: Export %root-account.
* gnu/system/install.scm (%installation-services): Use kmscon instead of linux
VT for all tty.
(installation-os)[users]: Add the graphical installer as shell of the root
account.
[packages]: Add font related packages.
* po/guix/POTFILES.in: Add installer files.
* gnu/packages/emacs.scm: Move almost all packages from here...
* gnu/packages/emacs-xyz.scm: ...to this new module.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/ocaml.scm,
gnu/packages/package-management.scm,
gnu/packages/statistics.scm: Update module references.
This was forgotten in ab533c613e.
* gnu/local.mk (dist_patch_DATA): Add
"allegro-fix-compilation-mesa-18.2.5-and-later.patch".
Signed-off-by: Jonathan Brielmaier <jbrielmaier@suse.de>
* gnu/packages/patches/python-pycodestyle-stdlib-tokenize-fix.patch: New
patch.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python-pycodestyle)[source]: Use it.
* gnu/packages/patches/aria2-CVE-2019-3500.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/bittorrent.scm (aria2)[source]: Use it.
Transfer the NixOS patches for kpackage as of 2018-02-17:
- Allow external paths.
- Make QDirIterator follow symlinks.
Decided to use a patch for one of the "allow external paths" changes since
'substitute*' seems not to be robust enough.
* gnu/packages/patches/kpackage-allow-external-paths.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/kde-frameworks.scm(kpackage)[source]: Use it. <patch>: New
phase.
Transfer the NixOS "kdeinit-libpath" patch for kinit as of
2018-02-17.
* gnu/packages/patches/kinit-kdeinit-libpath.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/kde-frameworks.scm (kinit)[source]: Use it.
Transfer the NixOS "kdeinit-extra_libs" patch for kinit as of
2018-02-17.
* gnu/packages/patches/kinit-kdeinit-extra_libs.patch: New filee.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/kde-frameworks.scm (kinit)[source]: Use it.
<patch-paths>: New phase.
[inputs]: Add kparts, plasma-framework.
Transfer the remaining NixOS patch for kio as of 2018-02-17.
* gnu/packages/patches/kio-search-smbd-on-PATH.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/kde-frameworks.scm(kio)<source>: Use it.
Fixes issue #32057 (see: https://issues.guix.info/issue/32057).
* gnu/packages/patches/gnucash-fix-test-transaction-failure.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/gnucash.scm (gnucash): Use it.
* gnu/packages/patches/efl-mesa-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/enlightenment.scm (efl)[source](patches): Use it.
* gnu/packages/patches/sssd-curl-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/sssd.scm (sssd)[source](patches): Use it.
* gnu/packages/patches/file-CVE-2018-10360.patch: New file.
* gnu/packages/file.scm (file)[replacement]: New field.
(file/fixed): New variable.
* gnu/packages/commencement.scm (file-boot0): Use 'package/inherit' to
receive security fixes.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/games.scm (pingus)[source]: Use 'git-fetch'. Add patch to
update used boost headers.
* gnu/packages/patches/pingus-boost-headers.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
This saves 4.4 MB on the installed Guix.
* gnu/packages/bootstrap/x86_64-linux: Remove directory.
* gnu/local.mk (bootstrap_x86_64_linuxdir)
(dist_bootstrap_x86_64_linux_DATA): Remove.
* gnu/packages.scm (search-bootstrap-binary): When SYSTEM is
"x86_64-linux", use "i686-linux" instead.
The new release of StumpWM broken the interactive 'gnew' command. It was
fixed upstream [0] and will be part of the next release.
0: https://github.com/stumpwm/stumpwm/pull/538
* gnu/packages/patches/stumpwm-fix-broken-read-one-line.patch: New file.
* gnu/packages/lisp.scm (stumpwm)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Register it.
This patch is missing from glibc 2.28 and is needed to support
/proc/self lookup when using the Hurd's procfs, which in turn is needed
for our 'guile-relocatable.patch'.
See <https://lists.gnu.org/archive/html/bug-hurd/2018-12/msg00024.html>.
* gnu/packages/patches/glibc-hurd-magic-pid.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/base.scm (glibc)[arguments]: Add 'apply-hurd-patch'
phase.
[native-inputs]: Add "hurd-magic-pid-patch" input.
* gnu/packages/cross-base.scm (cross-libc)[arguments]: Duplicate
'apply-hurd-patch' phase.
* gnu/packages/patches/openjdk-10-idlj-reproducibility.patch: New file.
* gnu/packages/java.scm (openjdk10)[source]: Use it.
* gnu/locale.mk (dist_patch_DATA): Register it.
* gnu/packages/patches/polkit-CVE-2018-19788.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/polkit.scm (polkit)[source]: Use it.
* gnu/packages/patches/beets-python-3.7-fix.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/music.scm (beets)[source]: Use it.
* gnu/packages/video.scm (handbrake): Update to 1.1.2.
[source]: Use direct download url. Remove upstreamed patch. Patch make
fragments in snippet.
[inputs]: Use latest ffmpeg. Add jansson and opus.
[arguments]: Remove 'disable-contrib phase, which is now in source snippet.
Move 'fix-x265-linking phase fix to #:configure-flags.
[license]: Use 'gpl2' as clarified in LICENSE.
* gnu/packages/patches/handbrake-pkg-config-path.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/patches/lirc-reproducible-build.patch: New file.
* gnu/packages/lirc.scm (lirc)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
This file name was too long to fit in a tar archive.
* gnu/packages/patches/rust-mdbook-support-reproducible-builds-by-forcing-window.search.patch:
Rename to...
* gnu/packages/patches/rust-reproducible-builds.patch: ... this.
* gnu/packages/rust.scm (rust-1.27, rust): Adjust accordingly.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
This was forgotten in 082d9383d1.
* gnu/local.mk (dist_patch_DATA): Add "ghc-haddock-library-unbundle.patch".
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Suggested by ngz on #guix.
* gnu/packages/patches/scribus-poppler.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/scribus.scm (scribus)[source]: Add patch.
* gnu/packages/video.scm (x265)[patches]: Add patch.
[arguments]: Add a configure-flag to disable assembly. Adjust a custom
phase to recognize armv8 as 32-bit arm when masquerading as armhf-linux.
* gnu/packages/video.scm (libopenshot): New variable.
* gnu/packages/patches/libopenshot-tests-with-system-libs.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/patches/mono-mdoc-timestamping.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/mono.scm (mono)[source]: Use patch.
[arguments]<#:phases>[make-reproducible]: New phase.
<#:phases>[set-env]: Set SOURCE_DATE_EPOCH.
* gnu/packages/patches/randomjungle-disable-static-build.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/machine-learning.scm (randomjungle)[source](patches): Add it.
[arguments]: Add "--disable-static" to #:configure-flags.
* gnu/packages/patches/python-scikit-learn-fix-test-non-determinism.patch:
Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/machine-learning.scm (python-scikit-learn): Update to 0.20.1.
[source](patches): Remove.
[arguments]: Skip network tests with pytest instead of deleting files. Make
sure $HOME is writable.
(python2-scikit-learn): Rewrite in terms of PACKAGE-WITH-PYTHON2.
* gnu/packages/patches/emacs-pdf-tools-poppler.patch: New file.
* gnu/packages/emacs.scm (emacs-pdf-tools)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/patches/casync-renameat2-declaration.patch: New file.
* gnu/packages/sync.scm (casync)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gnupg.scm (pinentry-efl): New variable.
* gnu/packages/patches/pinentry-efl.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
Update libgcrypt and remove reproducibility patch, it is now built-in.
See https://dev.gnupg.org/T4102
* gnu/packages/gnupg.scm (libgcrypt): Update to 1.8.4.
[source]: Remove patch.
* gnu/packages/patches/libgcrypt-make-yat2m-reproducible.patch: Delete file.
* gnu/local.mk(dist_patch_DATA): Remove it.
* gnu/packages/multiprecision.scm (tomsfastmath): New variable.
* gnu/packages/patches/tomsfastmath-constness.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
This fixes https://bugs.gnu.org/33196, a build problem caused by a defective
Elisp snippet in a check in configure.ac.
* gnu/packages/patches/emacs-realgud-fix-configure-ac.patch: Add patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/emacs.scm (emacs-realgud)[source]: Use it.
* gnu/packages/patches/poppler-CVE-2018-19149.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/pdf.scm (poppler)[replacement]: New field.
(poppler/fixed): New variable.
(poppler-qt4, poppler-qt5): Use package/inherit.
* gnu/packages/patches/python-cffi-x87-stack-clean.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/libffi.scm (python-cffi)[source](patches): Add it.
* gnu/packages/gnuzilla.scm (icecat): Update to 60.3.0-gnu1.
[source]: Switch back to the normal source URI. Remove patches that
are no longer applicable.
* gnu/packages/patches/icecat-CVE-2018-12383.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/patches/ceph-skip-unittest_blockdev.patch: Adjust for 13.2.2.
* gnu/packages/patches/ceph-rocksdb-compat.patch: Delete file.
* gnu/packages/patches/ceph-detect-rocksdb.patch,
gnu/packages/patches/ceph-volume-respect-PATH.patch: New files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/storage.scm (ceph): Update to 13.2.2.
[source]: Don't remove src/dpdk, which has been moved to src/spdk/dpdk and
is purged elsewhere. Drop bundled rapidjson. Adjust patch list.
[arguments]: Add "-DWITH_MGR_DASHBOARD_FRONTEND=OFF" and "-DWITH_SPDK=OFF" to
#:configure-flags. Drop obsolete "-DWITH_EMBEDDED". Add workaround for
<https://bugs.gnu.org/30756>. Remove obsolete test substitution. Rework
'wrap-python-script' to be less verbose and wrap more scripts.
[native-inputs]: Add GCC-7.
[inputs]: Add OATH-TOOLKIT, RAPIDJSON and PYTHON2-SIX.
Debian and Archlinux (at least) force the installation of the
localedata/SUPPORTED file of the glibc. This file lists all the supported
locales of the glibc.
* gnu/packages/patches/glibc-supported-locales.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/base.scm (glibc/linux): Add the previous patch,
(glibc-2.28): ditto.
* gnu/packages/patches/libgit2-oom-test.patch: New file.
* gnu/packages/version-control.scm (libgit2)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
This patch is no longer needed since 7930cfc989
was merged to core-updates.
* gnu/packages/patches/qtbase-glibc-compat.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/qt.scm (qtbase)[source](patches): Drop it.
* gnu/packages/patches/rust-mdbook-support-reproducible-builds-by-forcing-window.search.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add new patch file.
* gnu/packages/rust.scm (rust-1.19): Use system libssh2 library.
during cargo build. Note: libgit2 still bundled, because cargo
tests assume specific libgit2 minor release.
(rust-1.23): Inherit native-inputs from previous package.
(rust-1.25): Switch back to llvm 3.9.1 as workaround for
https://github.com/rust-lang/rust/issues/50556 issue.
(rust-1.27): Apply changes from
https://github.com/rust-lang-nursery/mdBook/pull/692 to make
generation of "searchindex.js" files reproducible. Disable cargo
test that required llvm 6.
* gnu/packages/gnome.scm (soundconverter): New variable.
* gnu/packages/patches/soundconverter-remove-gconf-dependency.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/patches/swig-guile-gc.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/swig.scm (swig)[source](patches): Use it.
This adjust the grafts from a55ebe2e3a and
90aeaee861 to apply to Python 2.7.15 and 3.7.0.
* gnu/packages/patches/python2-CVE-2018-1060.patch,
gnu/packages/patches/python2-CVE-2018-1061.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/packages/python.scm (python-2/fixed): Remove patches that are already
present in 2.7.15.
(python-3/fixed): Remove obsolete phase.
This addresses CVE-2018-{1060,1061,14647,1000802}.
* gnu/packages/patches/python2-CVE-2018-1000802.patch,
gnu/packages/patches/python2-CVE-2018-1060.patch,
gnu/packages/patches/python2-CVE-2018-1061.patch,
gnu/packages/patches/python2-CVE-2018-14647.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/python.scm (python-2/fixed): New variable.
(python-2.7)[replacement]: New field.
(python2-minimal): Use PACKAGE/INHERIT.
* gnu/packages/patches/python-CVE-2018-14647.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/python.scm (python-3/fixed): New variable.
(python-3.6)[replacement]: New field.
(python-minimal, python-debug, wrap-python3): Use PACKAGE/INHERIT instead of
standard inheritance.
* gnu/packages/llvm.scm (clang-runtime@3.7, clang-runtime@3.8,
clang-runtime@3.9)[patches]: Add patch to work around removed ustat.h.
* gnu/packages/patches/clang-3.5-libsanitizer-ustat-fix.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/video.scm (x265)[source]: Update list of patches.
[arguments]: Change configure flag to ensure PIC for all architectures.
* gnu/packages/patches/x265-arm-asm-primitives.patch: Remove file.
* gnu/packages/patches/x265-detect512-all-arches.patch: New file.
* gnu/local.mk (dist_patch_DATA): Update patch registry.
* gnu/packages/lisp.scm (clisp): Update to 2.49.92.
[source]: Switch to git-fetch. Remove unneeded patch.
[arguments]: Remove '--enable-portability' flag, add CFLAGS for
armhf-linux. Update list of files needing substitutions in custom
'patch-sh-and-pwd phase.
[home-page]: Update to new home-page.
* gnu/packages/patches/clisp-glibc-2.26.patch: Remove file.
& gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/patches/borg-respect-storage-quota.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/backup.scm (borg)[source]: Use it.
* gnu/packages/commencement.scm (mescc-tools-boot): Update to 0.5.2.
* gnu/packages/patches/mescc-tools-boot.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/games.scm (bastet): New public variable.
* gnu/packages/patches/bastet-change-source-of-unordered_set.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/patches/postgresql-disable-resolve_symlinks.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/databases.scm (postgresql)[source]: Use it.
* gnu/packages/patches/quilt-test-fix-regex.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/patchutils.scm (quilt)[version]: Upgrade to 0.65.
[source]: Use patch.
[arguments]: Adjust 'patch-tests' phase for new tests. Re-enable "mail"
test.
* gnu/packages/patches/icecat-use-system-media-libs.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/patches/icecat-avoid-bundled-libraries.patch: Add
another hunk to enable removal of libevent.
* gnu/packages/gnuzilla.scm (icecat)[source]: Add patch. In the snippet, add
libevent, libogg, libvorbis, and libtremor to the list of bundled libraries to
remove. Add a comment regarding theora. Remove comments regarding unbundling
cairo, which is no longer supported.
[inputs]: Add libevent, libogg, and libvorbis.
[arguments]: Add --with-system-{libevent,ogg,vorbis} to configure flags.
Add custom bootstrap phase. Add comments.
Includes fixes for CVE-2018-12383 and CVE-2018-12385.
* gnu/packages/patches/icecat-CVE-2018-12383.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/patches/icecat-avoid-bundled-libraries.patch: Adapt to apply
cleanly to IceCat 60.
* gnu/packages/gnuzilla.scm (mozilla-patch): Update to fetch from
mozilla-esr60.
(icecat): Add selected changesets from upstream mozilla-esr60.
* gnu/packages/gnuzilla.scm (icecat): Update to 60.2.0-gnu1.
[source]: Download pre-release from alpha.gnu.org. Remove obsolete patches.
Comment out the code to delete the bundled copies of libevent, cairo,
harfbuzz, and graphite2.
[inputs]: Use the latest ffmpeg. Comment out libevent, cairo, harfbuzz, and
graphite2.
[native-inputs]: Add rust and cargo.
[arguments]: Remove --enable-gio and --disable-gnomeui. Add --disable-stylo.
Comment out --with-system-{libevent,harfbuzz,graphite2}, --enable-system-cairo.
Import %cargo-build-system-modules. Add 'patch-cargo-checksums' phase.
* gnu/packages/patches/icecat-CVE-2018-5157-and-CVE-2018-5158.patch,
gnu/packages/patches/icecat-bug-1413868-pt1.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/packages/patches/xf86-video-ast-remove-mibstore.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/xorg.scm (xf86-video-ast): New public variable.
* gnu/packages/patches/rust-1.25-accept-more-detailed-gdb-lines.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/rust.scm (rust-1.25): Use it.
(rust-1.26): Use it.
(rust): Use it.
This allows (gnu services admin) to remain deeper in the module graph
and to be used by (gnu services web).
* gnu/services/admin.scm (<tailon-configuration-file>)
(tailon-configuration-files-string)
(tailon-configuration-file-compiler, <tailon-configuration>)
(tailon-shepherd-service, %tailon-accounts)
(tailon-service-type): Move to...
* gnu/services/web.scm: ... here.
* gnu/tests/admin.scm: Remove. Move test to...
* gnu/tests/web.scm (%tailon-os)
(run-tailon-test, %test-tailon): ... here.
* gnu/packages/patches/gd-CVE-2018-1000222.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gd.scm (gd/fixed): New variable.
* gnu/packages/php.scm (gd-for-php)[source]: Use 'gd-CVE-2018-1000222.patch'.
* gnu/packages/patches/oath-toolkit-glibc-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/authentication.scm (oath-toolkit)[source](patches): New field.
The following CVEs are fixed with this release: CVE-2018-15908,
CVE-2018-15909, CVE-2018-15910, CVE-2018-15911, CVE-2018-16509,
CVE-2018-16510, CVE-2018-16511, CVE-2018-16513, CVE-2018-16539,
CVE-2018-16540, CVE-2018-16541, CVE-2018-16542, CVE-2018-16543.
* gnu/packages/patches/ghostscript-CVE-2018-10194.patch: Delete file.
* gnu/packages/patches/ghostscript-CVE-2018-16509.patch,
gnu/packages/patches/ghostscript-bug-699708.patch: New files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/ghostscript.scm (ghostscript/fixed): Update to 9.24.
[source](patches): Remove 'ghostscript-CVE-2018-10194.patch' and
'ghostscript-runpath.patch'. Add 'ghostscript-CVE-2018-16509.patch' and
'ghostscript-bug-699708.patch'.
[arguments]: Add LDFLAGS to #:configure-flags, and a phase to create output
directory.
Fixes <https://bugs.gnu.org/31726>.
Thanks to Jack Hill <jackhill@jackhill.us> for exploring different solutions
at <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=31726>.
* gnu/packages/patches/haskell-mode-unused-variables.patch,
gnu/packages/patches/haskell-mode-make-check.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/emacs.scm (haskell-mode)[source]: Use them.
[arguments]: Adjust 'pre-build' phase to embed file name.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
* gnu/packages/patches/qtbase-glibc-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/qt.scm (qtbase)[source](patches): Use it.
[arguments]: Remove "--no-feature-renameat2" from #:configure-flags.
* gnu/packages/patches/texinfo-5-perl-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/texinfo.scm (texinfo-5)[source](patches): New field.
* gnu/packages/compression.scm (snappy)[source]: Build with ‘-O2’.
* gnu/package/patches/snappy-add-O2-flag-in-CmakeLists.txt.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/compression.scm (snappy)[source]: Build with ‘-O2’.
* gnu/package/patches/snappy-add-O2-flag-in-CmakeLists.txt.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/patches/dropbear-CVE-2018-15599.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/ssh.scm (dropbear)[source]: Use it.
* gnu/packages/patches/grub-binutils-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/bootloaders.scm (grub)[source](patches): Add it.
* gnu/packages/patches/grub-check-error-efibootmgr.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/bootloaders.scm (grub)[source](patches): New field.
This fixes <https://bugs.freedesktop.org/show_bug.cgi?id=104325> which showed
up in Guix as an infinite loop during cairocffi tests.
* gnu/packages/patches/cairo-setjmp-wrapper.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/gtk.scm (cairo)[source](patches): Add it.
* gnu/packages/patches/parted-glibc-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/disk.scm (parted)[source](patches): New field.
* gnu/packages/patches/findutils-gnulib-libio.patch,
gnu/packages/patches/findutils-makedev.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/base.scm (findutils)[source](patches): Use them.
* gnu/packages/patches/m4-gnulib-libio.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/m4.scm (m4)[source](patches): New field.
* gnu/packages/patches/gcc-libsanitizer-ustat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/gcc.scm (gcc-5)[source](patches): Add it.
* gnu/packages/patches/openssh-CVE-2018-15473.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/ssh.scm (openssh)[source]: Use it.
Fixes <https://bugs.gnu.org/32397>.
Reported by fis trivial <ybbs.daans@hotmail.com>.
* gnu/packages/patches/gcc-4.8-libsanitizer-fix.patch: New file.
* gnu/packages/gcc.scm (gcc-4.8)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/patches/libgcrypt-make-yat2m-reproducible.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gnupg.scm (libgcrypt)[source]: Use it.
Signed-off-by: Leo Famulari <leo@famulari.name>
It seems a recent version of sqlite broke Clementine's first startup. It turns
out we can patch clementine to fix the problem instead of providing a different
sqlite package:
<https://github.com/clementine-player/Clementine/pull/5669>
* gnu/packages/databases.scm (sqlite-with-fts3): Remove.
* gnu/packages/music.scm (clementine)[inputs]: Replace sqlite-with-fts3 with
sqlite.
[source]: Add clementine-fix-sqlite.patch.
* gnu/packages/patches/clementine-fix-sqlite.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
Signed-off-by: Leo Famulari <leo@famulari.name>
Also includes a fix for CVE-2018-0732, and a different approach to
fixing CVE-2018-0495.
* gnu/packages/tls.scm (openssl-next): Update to 1.1.0i.
[sources]: Remove CVE patches.
* gnu/packages/patches/openssl-1.1.0-CVE-2018-0495.patch: Delete...
* gnu/packages/patches/openssl-1.1.0-CVE-2018-0732.patch: ...both files.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/packages/patches/wpa-supplicant-CVE-2018-14526.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/admin.scm (wpa-supplicant-minimal)[source]: Use it.
* gnu/packages/patches/lxc-CVE-2018-6556.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/virtualization.scm (lxc)[source]: Use it.
* gnu/packages/patches/mariadb-client-test-32bit.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/databases.scm (mariadb)[source](patches): Add it.
[arguments]: Increase retry count and test timeout. Disable test
main.myisampack.
* gnu/packages/patches/libreoffice-glm.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/libreoffice.scm (libreoffice)[source](patches): Add it.
* gnu/packages/patches/gdb-python-3.7.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/gdb.scm (gdb)[source](patches): New field.
* gnu/packages/patches/x265-arm-asm-primitives.patch: New file.
* gnu/packages/video.scm (x265)[sources](patches): Add it.
* gnu/local.mk (dist_patch_DATA): Add it.
