Commit graph

484 commits

Author SHA1 Message Date
zimoun
ed6f49fc41
gnu: Add r-consensusclusterplus.
* gnu/packages/bioconductor.scm (r-consensusclusterplus): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-07-24 23:05:39 +02:00
zimoun
a0422d18f1
gnu: Add r-flowutils.
* gnu/packages/bioconductor.scm (r-flowutils): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-07-24 23:05:39 +02:00
zimoun
a6fedf1f37
gnu: Add r-flowcore.
* gnu/packages/bioconductor.scm (r-flowcore): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-07-24 23:05:39 +02:00
zimoun
ad8f46c69e
gnu: Add r-all.
* gnu/packages/bioconductor.scm (r-all): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-07-24 23:05:39 +02:00
Tobias Geerinckx-Rice
61242625ad
gnu: r-txdb-mmusculus-ucsc-mm10-knowngene: Update to 3.4.7.
* gnu/packages/bioconductor.scm (r-txdb-mmusculus-ucsc-mm10-knowngene):
Update to 3.4.7.
2019-07-08 15:33:35 +02:00
Ricardo Wurmus
3e265d968b
gnu: r-rsubread: Update to 1.34.4.
* gnu/packages/bioconductor.scm (r-rsubread): Update to 1.34.4.
2019-06-29 01:34:42 +02:00
Ricardo Wurmus
3c944fdace
gnu: r-genomicscores: Update to 1.8.1.
* gnu/packages/bioconductor.scm (r-genomicscores): Update to 1.8.1.
2019-06-29 01:34:42 +02:00
Ricardo Wurmus
aff3ecbfda
gnu: r-dose: Update to 3.10.2.
* gnu/packages/bioconductor.scm (r-dose): Update to 3.10.2.
2019-06-29 01:34:42 +02:00
Ricardo Wurmus
2cb738a6ad
gnu: Add r-rsubread.
* gnu/packages/bioconductor.scm (r-rsubread): New variable.
2019-06-26 15:52:10 +02:00
Ricardo Wurmus
932a6c422a
gnu: r-rhisat2: Update to 1.0.3.
* gnu/packages/bioconductor.scm (r-rhisat2): Update to 1.0.3.
2019-06-17 04:55:12 +02:00
Ricardo Wurmus
798b80cea2
gnu: Add r-txdb-hsapiens-ucsc-hg38-knowngene.
* gnu/packages/bioconductor.scm (r-txdb-hsapiens-ucsc-hg38-knowngene): New variable.
2019-06-12 16:23:44 +02:00
Ricardo Wurmus
ae6fa185af
gnu: Add r-annotatr.
* gnu/packages/bioconductor.scm (r-annotatr): New variable.
2019-06-12 11:07:37 +02:00
Ricardo Wurmus
075a90946b
gnu: Add r-biosigner.
* gnu/packages/bioconductor.scm (r-biosigner): New variable.
2019-06-10 13:41:48 +02:00
Ricardo Wurmus
a9fac3f4d3
gnu: Add r-ropls.
* gnu/packages/bioconductor.scm (r-ropls): New variable.
2019-06-10 13:41:45 +02:00
Ricardo Wurmus
2d1d59ab57
gnu: r-rhisat2: Update to 1.0.2.
* gnu/packages/bioconductor.scm (r-rhisat2): Update to 1.0.2.
2019-06-09 15:19:58 +02:00
Ricardo Wurmus
61730c3db4
gnu: r-aucell: Update to 1.6.1.
* gnu/packages/bioconductor.scm (r-aucell): Update to 1.6.1.
2019-06-09 15:19:58 +02:00
Ricardo Wurmus
1a24f855c8
gnu: Add r-birta.
* gnu/packages/bioconductor.scm (r-birta): New variable.
2019-05-31 14:40:29 +02:00
Ricardo Wurmus
81e3de01ae
gnu: Add r-birewire.
* gnu/packages/bioconductor.scm (r-birewire): New variable.
2019-05-31 14:40:20 +02:00
Ricardo Wurmus
d1ee1540d4
gnu: r-dose: Update to 3.10.1.
* gnu/packages/bioconductor.scm (r-dose): Update to 3.10.1.
2019-05-30 13:40:48 +02:00
Ricardo Wurmus
e4519ee73d
gnu: r-atacseqqc: Update to 1.8.1.
* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.8.1.
2019-05-28 23:56:36 +02:00
Ricardo Wurmus
13b49976b7
gnu: r-icobra: Update to 1.12.1.
* gnu/packages/bioconductor.scm (r-icobra): Update to 1.12.1.
2019-05-28 23:56:31 +02:00
Ricardo Wurmus
85d0bd5340
gnu: r-chippeakanno: Update to 3.18.1.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.18.1.
2019-05-28 23:56:27 +02:00
Vagrant Cascadian
337bdc17ce
gnu: r-widgettools: Fix typo "This package".
* gnu/packages/bioconductor (r-widgettools)[description]: Fix typo.
2019-05-22 18:07:55 -07:00
Vagrant Cascadian
02fe0976b6
gnu: r-interactionset: Fix typo "This package".
* gnu/packages/bioconductor (r-interactionset)[description]: Fix typo.
2019-05-22 18:07:53 -07:00
Vagrant Cascadian
4f66400493
gnu: r-anota: Fix typo "parallel".
* gnu/packages/bioconductor (r-anota)[description]: Fix typo.
2019-05-22 18:07:50 -07:00
Vagrant Cascadian
0cea26bda1
gnu: r-anota: Fix typo "various".
* gnu/packages/bioconductor (r-anota)[description]: Fix typo.
2019-05-22 18:07:47 -07:00
Vagrant Cascadian
ab8979fc2c
gnu: r-marray: Fix typo "function".
* gnu/packages/bioconductor (r-marray)[description]: Fix typo.
2019-05-22 18:07:43 -07:00
Ricardo Wurmus
b3319f4c9e
gnu: r-quasr: Update to 1.24.2.
* gnu/packages/bioconductor.scm (r-quasr): Update to 1.24.2.
2019-05-20 15:05:55 +02:00
Ricardo Wurmus
371c73b2e6
gnu: r-rhisat2: Update to 1.0.1.
* gnu/packages/bioconductor.scm (r-rhisat2): Update to 1.0.1.
2019-05-20 15:05:48 +02:00
Ricardo Wurmus
b8f6b813c9
gnu: r-regioner: Update to 1.16.2.
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.16.2.
2019-05-20 15:04:56 +02:00
Ricardo Wurmus
40b2f7bc0e
gnu: r-xcms: Update to 3.6.1.
* gnu/packages/bioconductor.scm (r-xcms): Update to 3.6.1.
2019-05-20 12:00:33 +02:00
Ricardo Wurmus
d1d6e13eb6
gnu: r-regioner: Update to 1.16.1.
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.16.1.
2019-05-11 12:05:32 +02:00
Ricardo Wurmus
496b024fde
gnu: Add r-rqc.
* gnu/packages/bioconductor.scm (r-rqc): New variable.
2019-05-10 13:31:03 +02:00
Ricardo Wurmus
5e0241db84
gnu: Add r-quasr.
* gnu/packages/bioconductor.scm (r-quasr): New variable.
2019-05-10 13:31:03 +02:00
Ricardo Wurmus
5865606459
gnu: Add r-rhisat2.
* gnu/packages/bioconductor.scm (r-rhisat2): New variable.
2019-05-10 13:31:03 +02:00
Ricardo Wurmus
1444153913
gnu: Add r-sgseq.
* gnu/packages/bioconductor.scm (r-sgseq): New variable.
2019-05-10 13:31:03 +02:00
Ricardo Wurmus
4d06ef4b71
gnu: Add r-rbowtie.
* gnu/packages/bioconductor.scm (r-rbowtie): New variable.
2019-05-10 13:31:02 +02:00
Ricardo Wurmus
8c42f8f6e8
gnu: Add r-iclusterplus.
* gnu/packages/bioconductor.scm (r-iclusterplus): New variable.
2019-05-10 13:31:01 +02:00
Ricardo Wurmus
93f8a00964
gnu: r-rgadem: Update to 2.32.0.
* gnu/packages/bioconductor.scm (r-rgadem): Update to 2.32.0.
2019-05-06 16:11:17 +02:00
Ricardo Wurmus
85c1d20fa6
gnu: r-chippeakanno: Update to 3.18.0.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.18.0.
[propagated-inputs]: Add r-rtracklayer.
2019-05-06 00:14:59 +02:00
Ricardo Wurmus
c24adbbf07
gnu: r-arrmnormalization: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-arrmnormalization): Update to 1.24.0.
2019-05-06 00:14:59 +02:00
Ricardo Wurmus
c2bfb978bf
gnu: r-progeny: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-progeny): Update to 1.6.0.
2019-05-06 00:14:59 +02:00
Ricardo Wurmus
7d33d36c52
gnu: r-rbowtie2: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-rbowtie2): Update to 1.6.0.
2019-05-06 00:14:58 +02:00
Ricardo Wurmus
02530c2821
gnu: r-zfpkm: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-zfpkm): Update to 1.6.0.
2019-05-06 00:14:58 +02:00
Ricardo Wurmus
67bc9255d5
gnu: r-webbioc: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-webbioc): Update to 1.56.0.
2019-05-06 00:14:58 +02:00
Ricardo Wurmus
c881b9ef3a
gnu: r-widgettools: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-widgettools): Update to 1.62.0.
2019-05-06 00:14:58 +02:00
Ricardo Wurmus
a6edf33533
gnu: r-wiggleplotr: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-wiggleplotr): Update to 1.8.0.
2019-05-06 00:14:58 +02:00
Ricardo Wurmus
07597c85d8
gnu: r-wrench: Update to 1.2.0.
* gnu/packages/bioconductor.scm (r-wrench): Update to 1.2.0.
2019-05-06 00:14:58 +02:00
Ricardo Wurmus
298f7f112f
gnu: r-xcms: Update to 3.6.0.
* gnu/packages/bioconductor.scm (r-xcms): Update to 3.6.0.
2019-05-06 00:14:58 +02:00
Ricardo Wurmus
7c888138ef
gnu: r-massspecwavelet: Update to 1.50.0.
* gnu/packages/bioconductor.scm (r-massspecwavelet): Update to 1.50.0.
2019-05-06 00:14:58 +02:00
Ricardo Wurmus
88469def75
gnu: r-xbseq: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-xbseq): Update to 1.16.0.
2019-05-06 00:14:57 +02:00
Ricardo Wurmus
0334b203d7
gnu: r-roar: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-roar): Update to 1.20.0.
2019-05-06 00:14:57 +02:00
Ricardo Wurmus
7f4957b24e
gnu: r-yarn: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-yarn): Update to 1.10.0.
2019-05-06 00:14:57 +02:00
Ricardo Wurmus
2feea2d22a
gnu: r-quantro: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-quantro): Update to 1.18.0.
2019-05-06 00:14:57 +02:00
Ricardo Wurmus
f48e29daa3
gnu: r-yaqcaffy: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-yaqcaffy): Update to 1.44.0.
2019-05-06 00:14:57 +02:00
Ricardo Wurmus
38c5d13a73
gnu: r-simpleaffy: Update to 2.60.0.
* gnu/packages/bioconductor.scm (r-simpleaffy): Update to 2.60.0.
2019-05-06 00:14:57 +02:00
Ricardo Wurmus
56576bea97
gnu: r-gcrma: Update to 2.56.0.
* gnu/packages/bioconductor.scm (r-gcrma): Update to 2.56.0.
2019-05-06 00:14:57 +02:00
Ricardo Wurmus
edba69b2ff
gnu: r-yapsa: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-yapsa): Update to 1.10.0.
2019-05-06 00:14:57 +02:00
Ricardo Wurmus
3cdc5d1a7b
gnu: r-somaticsignatures: Update to 2.20.0.
* gnu/packages/bioconductor.scm (r-somaticsignatures): Update to 2.20.0.
2019-05-06 00:14:56 +02:00
Ricardo Wurmus
128c6d59f0
gnu: r-gtrellis: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-gtrellis): Update to 1.16.0.
2019-05-06 00:14:56 +02:00
Ricardo Wurmus
1269a926c0
gnu: r-yamss: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-yamss): Update to 1.10.0.
2019-05-06 00:14:56 +02:00
Ricardo Wurmus
2a6d838337
gnu: r-ebimage: Update to 4.26.0.
* gnu/packages/bioconductor.scm (r-ebimage): Update to 4.26.0.
2019-05-06 00:14:56 +02:00
Ricardo Wurmus
b68a9e80f4
gnu: r-aucell: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-aucell): Update to 1.6.0.
2019-05-06 00:14:56 +02:00
Ricardo Wurmus
9da2021f49
gnu: r-allelicimbalance: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-allelicimbalance): Update to 1.22.0.
2019-05-06 00:14:56 +02:00
Ricardo Wurmus
ee1a45d719
gnu: r-annotationtools: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-annotationtools): Update to 1.58.0.
2019-05-06 00:14:56 +02:00
Ricardo Wurmus
69a2ec5447
gnu: r-annotationfuncs: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-annotationfuncs): Update to 1.34.0.
2019-05-06 00:14:56 +02:00
Ricardo Wurmus
e2e1dea2bb
gnu: r-abaenrichment: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-abaenrichment): Update to 1.14.0.
2019-05-06 00:14:55 +02:00
Ricardo Wurmus
bab06a6ff3
gnu: r-gofuncr: Update to 1.4.0.
* gnu/packages/bioconductor.scm (r-gofuncr): Update to 1.4.0.
2019-05-06 00:14:55 +02:00
Ricardo Wurmus
bcc233c1a6
gnu: r-atacseqqc: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.8.0.
[propagated-inputs]: Add r-edger.
2019-05-06 00:14:55 +02:00
Ricardo Wurmus
19ee76379c
gnu: r-genomicscores: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-genomicscores): Update to 1.8.0.
2019-05-06 00:14:55 +02:00
Ricardo Wurmus
aa0ebfd2eb
gnu: r-motifstack: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-motifstack): Update to 1.28.0.
[propagated-inputs]: Replace r-grimport with r-grimport2.
2019-05-06 00:14:55 +02:00
Ricardo Wurmus
f7a495b159
gnu: r-motiv: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-motiv): Update to 1.40.0.
2019-05-06 00:14:55 +02:00
Ricardo Wurmus
a5860ebe87
gnu: r-rgadem: Update to 2.31.0.
* gnu/packages/bioconductor.scm (r-rgadem): Update to 2.31.0.
2019-05-06 00:14:54 +02:00
Ricardo Wurmus
e33c25ff2c
gnu: r-bacon: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-bacon): Update to 1.12.0.
2019-05-06 00:14:54 +02:00
Ricardo Wurmus
b7ddf0f048
gnu: r-abseqr: Update to 1.2.0.
* gnu/packages/bioconductor.scm (r-abseqr): Update to 1.2.0.
2019-05-06 00:14:54 +02:00
Ricardo Wurmus
1aadddeaa9
gnu: r-a4: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-a4): Update to 1.32.0.
2019-05-06 00:14:54 +02:00
Ricardo Wurmus
ae1730ae1a
gnu: r-a4base: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-a4base): Update to 1.32.0.
2019-05-06 00:14:54 +02:00
Ricardo Wurmus
e5a36543ac
gnu: r-a4reporting: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-a4reporting): Update to 1.32.0.
2019-05-06 00:14:54 +02:00
Ricardo Wurmus
0b6091621f
gnu: r-a4preproc: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-a4preproc): Update to 1.32.0.
2019-05-06 00:14:54 +02:00
Ricardo Wurmus
82de77da5a
gnu: r-a4classif: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-a4classif): Update to 1.32.0.
2019-05-06 00:14:53 +02:00
Ricardo Wurmus
b077e3db2a
gnu: r-a4core: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-a4core): Update to 1.32.0.
2019-05-06 00:14:53 +02:00
Ricardo Wurmus
8bef9df4d4
gnu: r-annaffy: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-annaffy): Update to 1.56.0.
2019-05-06 00:14:53 +02:00
Ricardo Wurmus
8265a1115e
gnu: r-mlinterfaces: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.64.0.
2019-05-06 00:14:53 +02:00
Ricardo Wurmus
1a3e33be23
gnu: r-clusterprofiler: Update to 3.12.0.
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 3.12.0.
2019-05-06 00:14:53 +02:00
Ricardo Wurmus
77d28d665c
gnu: r-enrichplot: Update to 1.4.0.
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.4.0.
2019-05-06 00:14:53 +02:00
Ricardo Wurmus
1990ff9d10
gnu: r-dose: Update to 3.10.0.
* gnu/packages/bioconductor.scm (r-dose): Update to 3.10.0.
2019-05-06 00:14:53 +02:00
Ricardo Wurmus
ebffd24c10
gnu: r-fgsea: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-fgsea): Update to 1.10.0.
[propagated-inputs]: Add r-bh.
2019-05-06 00:14:53 +02:00
Ricardo Wurmus
3e5ee6f69f
gnu: r-sigpathway: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-sigpathway): Update to 1.52.0.
2019-05-06 00:14:53 +02:00
Ricardo Wurmus
0a41b5db95
gnu: r-anota: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-anota): Update to 1.32.0.
2019-05-06 00:14:52 +02:00
Ricardo Wurmus
24cf7bad99
gnu: r-gosemsim: Update to 2.10.0.
* gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.10.0.
2019-05-06 00:14:52 +02:00
Ricardo Wurmus
376d1fe759
gnu: r-heatplus: Update to 2.30.0.
* gnu/packages/bioconductor.scm (r-heatplus): Update to 2.30.0.
2019-05-06 00:14:52 +02:00
Ricardo Wurmus
c2effdedc0
gnu: r-varianttools: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-varianttools): Update to 1.26.0.
2019-05-06 00:14:52 +02:00
Ricardo Wurmus
bc083ecab8
gnu: r-triform: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-triform): Update to 1.26.0.
2019-05-06 00:14:52 +02:00
Ricardo Wurmus
2ee91179d1
gnu: r-ioniser: Update to 2.8.0.
* gnu/packages/bioconductor.scm (r-ioniser): Update to 2.8.0.
2019-05-06 00:14:52 +02:00
Ricardo Wurmus
48c2a7eb39
gnu: r-linnorm: Update to 2.8.0.
* gnu/packages/bioconductor.scm (r-linnorm): Update to 2.8.0.
2019-05-06 00:14:52 +02:00
Ricardo Wurmus
5551b07cde
gnu: r-lumi: Update to 2.36.0.
* gnu/packages/bioconductor.scm (r-lumi): Update to 2.36.0.
2019-05-06 00:14:51 +02:00
Ricardo Wurmus
2986b51ffe
gnu: r-methylumi: Update to 2.30.0.
* gnu/packages/bioconductor.scm (r-methylumi): Update to 2.30.0.
2019-05-06 00:14:51 +02:00
Ricardo Wurmus
8c0fae3cd4
gnu: r-minfi: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-minfi): Update to 1.30.0.
2019-05-06 00:14:51 +02:00
Ricardo Wurmus
693a98056c
gnu: r-bumphunter: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-bumphunter): Update to 1.26.0.
2019-05-06 00:14:51 +02:00
Ricardo Wurmus
409f4dd652
gnu: r-siggenes: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-siggenes): Update to 1.58.0.
[propagated-inputs]: Add r-scrime.
2019-05-06 00:14:51 +02:00
Ricardo Wurmus
fadc6db82d
gnu: r-illuminaio: Update to 0.26.0.
* gnu/packages/bioconductor.scm (r-illuminaio): Update to 0.26.0.
2019-05-06 00:14:51 +02:00
Ricardo Wurmus
2d4430877a
gnu: r-geoquery: Update to 2.52.0.
* gnu/packages/bioconductor.scm (r-geoquery): Update to 2.52.0.
2019-05-06 00:14:51 +02:00
Ricardo Wurmus
26c72fffc1
gnu: r-scone: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-scone): Update to 1.8.0.
2019-05-06 00:14:50 +02:00
Ricardo Wurmus
7baa59ed4d
gnu: r-scdd: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-scdd): Update to 1.8.0.
2019-05-06 00:14:50 +02:00
Ricardo Wurmus
6a2c58b7e0
gnu: r-noiseq: Update to 2.28.0.
* gnu/packages/bioconductor.scm (r-noiseq): Update to 2.28.0.
2019-05-06 00:14:50 +02:00
Ricardo Wurmus
78b6326785
gnu: r-monocle: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-monocle): Update to 2.12.0.
2019-05-06 00:14:50 +02:00
Ricardo Wurmus
a0ff725d6a
gnu: r-mast: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-mast): Update to 1.10.0.
[propagated-inputs]: Add r-blme.
2019-05-06 00:14:50 +02:00
Ricardo Wurmus
3fd2ea8883
gnu: r-icobra: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-icobra): Update to 1.12.0.
2019-05-06 00:14:50 +02:00
Ricardo Wurmus
bcd8b7a9bd
gnu: r-ihw: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-ihw): Update to 1.12.0.
2019-05-06 00:14:50 +02:00
Ricardo Wurmus
61c79d55e3
gnu: r-lpsymphony: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-lpsymphony): Update to 1.12.0.
2019-05-06 00:14:49 +02:00
Ricardo Wurmus
4a3c47e940
gnu: r-ebseq: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-ebseq): Update to 1.24.0.
2019-05-06 00:14:49 +02:00
Ricardo Wurmus
301c4ff12a
gnu: r-deds: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-deds): Update to 1.58.0.
2019-05-06 00:14:49 +02:00
Ricardo Wurmus
d5f3c0d09e
gnu: r-dnacopy: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-dnacopy): Update to 1.58.0.
2019-05-06 00:14:49 +02:00
Ricardo Wurmus
d941918599
gnu: r-copynumber: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-copynumber): Update to 1.24.0.
2019-05-06 00:14:49 +02:00
Ricardo Wurmus
58a43fc28e
gnu: r-chipexoqual: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-chipexoqual): Update to 1.8.0.
2019-05-06 00:14:49 +02:00
Ricardo Wurmus
8d3d0c3abe
gnu: r-savr: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-savr): Update to 1.22.0.
2019-05-06 00:14:49 +02:00
Ricardo Wurmus
0aa72f2d1e
gnu: r-destiny: Update to 2.14.0.
* gnu/packages/bioconductor.scm (r-destiny): Update to 2.14.0.
[propagated-inputs]: Remove r-fnn and r-hmisc; add r-ggplot2.
2019-05-06 00:14:48 +02:00
Ricardo Wurmus
6fc161fc3e
gnu: r-biocneighbors: Update to 1.2.0.
* gnu/packages/bioconductor.scm (r-biocneighbors): Update to 1.2.0.
[propagated-inputs]: Add r-biocgenerics and r-rcpphnsw.
2019-05-06 00:14:48 +02:00
Ricardo Wurmus
d8771f5fd6
gnu: r-ruvseq: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-ruvseq): Update to 1.18.0.
2019-05-06 00:14:48 +02:00
Ricardo Wurmus
774e499cec
gnu: r-dnabarcodes: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-dnabarcodes): Update to 1.14.0.
2019-05-06 00:14:48 +02:00
Ricardo Wurmus
3649d046a6
gnu: r-inspect: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-inspect): Update to 1.14.0.
2019-05-06 00:14:48 +02:00
Ricardo Wurmus
5dce71535f
gnu: r-plgem: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-plgem): Update to 1.56.0.
2019-05-06 00:14:48 +02:00
Ricardo Wurmus
5bf7eb49f6
gnu: r-rots: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-rots): Update to 1.12.0.
2019-05-06 00:14:48 +02:00
Ricardo Wurmus
07252952b7
gnu: r-glimma: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-glimma): Update to 1.12.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus
40f0ee43a0
gnu: r-goseq: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-goseq): Update to 1.36.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus
7a5d729af1
gnu: r-ctc: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-ctc): Update to 1.58.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus
1236ce8e22
gnu: r-genomicinteractions: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-genomicinteractions): Update to 1.18.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus
176a264c7c
gnu: r-interactionset: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-interactionset): Update to 1.12.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus
eff6b2eb12
gnu: r-riboseqr: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-riboseqr): Update to 1.18.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus
7d5acf7a25
gnu: r-riboprofiling: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-riboprofiling): Update to 1.14.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus
1ddd4af5a0
gnu: r-chipcomp: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-chipcomp): Update to 1.14.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus
c38de81594
gnu: r-bayseq: Update to 2.18.0.
* gnu/packages/bioconductor.scm (r-bayseq): Update to 2.18.0.
2019-05-06 00:14:46 +02:00
Ricardo Wurmus
4f4bed7de5
gnu: r-qdnaseq: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-qdnaseq): Update to 1.20.0.
2019-05-06 00:14:46 +02:00
Ricardo Wurmus
2317730994
gnu: r-cghcall: Update to 2.46.0.
* gnu/packages/bioconductor.scm (r-cghcall): Update to 2.46.0.
2019-05-06 00:14:46 +02:00
Ricardo Wurmus
8efb842f11
gnu: r-cghbase: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-cghbase): Update to 1.44.0.
2019-05-06 00:14:46 +02:00
Ricardo Wurmus
bcb95b7aac
gnu: r-marray: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-marray): Update to 1.62.0.
2019-05-06 00:14:46 +02:00
Ricardo Wurmus
a61bcb28f7
gnu: r-graph: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-graph): Update to 1.62.0.
2019-05-06 00:14:46 +02:00
Ricardo Wurmus
588b63c2af
gnu: r-multtest: Update to 2.40.0.
* gnu/packages/bioconductor.scm (r-multtest): Update to 2.40.0.
2019-05-06 00:14:45 +02:00
Ricardo Wurmus
0968a44874
gnu: r-ripseeker: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-ripseeker): Update to 1.24.0.
2019-05-06 00:14:45 +02:00
Ricardo Wurmus
4c221b3bbf
gnu: r-diffbind: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 2.12.0.
[propagated-inputs]: Add r-rhtslib; remove r-zlibbioc.
2019-05-06 00:14:45 +02:00
Ricardo Wurmus
e02162f7ba
gnu: r-qvalue: Update to 2.16.0.
* gnu/packages/bioconductor.scm (r-qvalue): Update to 2.16.0.
2019-05-06 00:14:45 +02:00
Ricardo Wurmus
3e1bc88c1f
gnu: r-geneplotter: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-geneplotter): Update to 1.62.0.
2019-05-06 00:14:45 +02:00
Ricardo Wurmus
4b53d55e98
gnu: r-regioner: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.16.0.
2019-05-06 00:14:45 +02:00
Ricardo Wurmus
43a23a0733
gnu: r-hpar: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-hpar): Update to 1.26.0.
2019-05-06 00:14:44 +02:00
Ricardo Wurmus
0c53332a27
gnu: r-annotate: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-annotate): Update to 1.62.0.
2019-05-06 00:14:44 +02:00
Ricardo Wurmus
81a1c45df5
gnu: r-biocgenerics: Update to 0.30.0.
* gnu/packages/bioconductor.scm (r-biocgenerics): Update to 0.30.0.
2019-05-06 00:14:44 +02:00
Ricardo Wurmus
fbf3494972
gnu: Add r-biocfilecache.
* gnu/packages/bioconductor.scm (r-biocfilecache): New variable.
2019-05-06 00:14:39 +02:00
Ricardo Wurmus
993912905d
gnu: Add r-biocsingular.
* gnu/packages/bioconductor.scm (r-biocsingular): New variable.
2019-05-06 00:14:28 +02:00
Tobias Geerinckx-Rice
9b19734c50
gnu: r-yamss: Fix typo in description.
* gnu/packages/bioconductor.scm (r-yamss)[description]: Fix typo.
2019-04-25 04:42:16 +02:00
Ricardo Wurmus
2da8588ebc
gnu: r-mlinterfaces: Update to 1.62.1.
* gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.62.1.
2019-04-06 23:13:26 +02:00
Ricardo Wurmus
bb94f7257e
gnu: r-inspect: Update to 1.12.2.
* gnu/packages/bioconductor.scm (r-inspect): Update to 1.12.2.
2019-04-06 23:13:26 +02:00
Ricardo Wurmus
307586c1e3
gnu: Add r-arrmnormalization.
* gnu/packages/bioconductor.scm (r-arrmnormalization): New variable.
2019-04-03 17:42:18 +02:00
Ricardo Wurmus
b50c966087
gnu: Add r-arrmdata.
* gnu/packages/bioconductor.scm (r-arrmdata): New variable.
2019-04-03 17:42:18 +02:00
Ricardo Wurmus
5622628fd1
gnu: Add r-progeny.
* gnu/packages/bioconductor.scm (r-progeny): New variable.
2019-04-03 17:42:18 +02:00
Ricardo Wurmus
2bdc88fce7
gnu: Add r-rbowtie2.
* gnu/packages/bioconductor.scm (r-rbowtie2): New variable.
2019-04-03 17:42:18 +02:00
Ricardo Wurmus
9800d859a7
gnu: Add r-zfpkm.
* gnu/packages/bioconductor.scm (r-zfpkm): New variable.
2019-04-03 17:42:18 +02:00
Ricardo Wurmus
6b12f21363
gnu: Add r-webbioc.
* gnu/packages/bioconductor.scm (r-webbioc): New variable.
2019-04-03 17:42:18 +02:00
Ricardo Wurmus
7b5101c5bf
gnu: Add r-widgettools.
* gnu/packages/bioconductor.scm (r-widgettools): New variable.
2019-04-03 17:42:17 +02:00
Ricardo Wurmus
b9b8b447ec
gnu: Add r-wiggleplotr.
* gnu/packages/bioconductor.scm (r-wiggleplotr): New variable.
2019-04-03 17:42:17 +02:00
Ricardo Wurmus
8830664d61
gnu: Add r-wrench.
* gnu/packages/bioconductor.scm (r-wrench): New variable.
2019-04-03 17:42:17 +02:00
Ricardo Wurmus
ec12e53736
gnu: Add r-xcms.
* gnu/packages/bioconductor.scm (r-xcms): New variable.
2019-03-30 08:55:46 +01:00
Ricardo Wurmus
c8310056f4
gnu: Add r-massspecwavelet.
* gnu/packages/bioconductor.scm (r-massspecwavelet): New variable.
2019-03-30 08:55:46 +01:00
Ricardo Wurmus
50d9177051
gnu: Add r-xbseq.
* gnu/packages/bioconductor.scm (r-xbseq): New variable.
2019-03-30 08:55:46 +01:00
Ricardo Wurmus
a6e1eb1a96
gnu: Add r-roar.
* gnu/packages/bioconductor.scm (r-roar): New variable.
2019-03-30 08:55:46 +01:00
Ricardo Wurmus
98a2af31a8
gnu: Add r-yarn.
* gnu/packages/bioconductor.scm (r-yarn): New variable.
2019-03-30 08:55:45 +01:00
Ricardo Wurmus
59cf26292f
gnu: Add r-quantro.
* gnu/packages/bioconductor.scm (r-quantro): New variable.
2019-03-30 08:55:45 +01:00
Ricardo Wurmus
f562c90aa8
gnu: Add r-yaqcaffy.
* gnu/packages/bioconductor.scm (r-yaqcaffy): New variable.
2019-03-30 08:55:45 +01:00
Ricardo Wurmus
4675b3cfa3
gnu: Add r-simpleaffy.
* gnu/packages/bioconductor.scm (r-simpleaffy): New variable.
2019-03-30 08:55:45 +01:00
Ricardo Wurmus
e99380d67b
gnu: Add r-gcrma.
* gnu/packages/bioconductor.scm (r-gcrma): New variable.
2019-03-30 08:55:45 +01:00
Ricardo Wurmus
303f2ed1c6
gnu: Add r-yapsa.
* gnu/packages/bioconductor.scm (r-yapsa): New variable.
2019-03-30 08:55:45 +01:00
Ricardo Wurmus
28098414d0
gnu: Add r-somaticsignatures.
* gnu/packages/bioconductor.scm (r-somaticsignatures): New variable.
2019-03-30 08:55:45 +01:00
Ricardo Wurmus
398c4a9347
gnu: Add r-gtrellis.
* gnu/packages/bioconductor.scm (r-gtrellis): New variable.
2019-03-30 08:55:45 +01:00
Ricardo Wurmus
51e98f7e0f
gnu: Add r-yamss.
* gnu/packages/bioconductor.scm (r-yamss): New variable.
2019-03-29 19:28:11 +01:00
Ricardo Wurmus
5cfa4bff69
gnu: Add r-ebimage.
* gnu/packages/bioconductor.scm (r-ebimage): New variable.
2019-03-29 19:28:03 +01:00
Ricardo Wurmus
ffe7029bab
gnu: Add r-aucell.
* gnu/packages/bioconductor.scm (r-aucell): New variable.
2019-03-29 18:10:46 +01:00
Ricardo Wurmus
f31e10f82e
gnu: Add r-allelicimbalance.
* gnu/packages/bioconductor.scm (r-allelicimbalance): New variable.
2019-03-29 18:07:17 +01:00
Ricardo Wurmus
adf7d8135b
gnu: Add r-annotationtools.
* gnu/packages/bioconductor.scm (r-annotationtools): New variable.
2019-03-29 18:05:45 +01:00
Ricardo Wurmus
0b91b7b969
gnu: Add r-annotationfuncs.
* gnu/packages/bioconductor.scm (r-annotationfuncs): New variable.
2019-03-29 17:49:54 +01:00
Ricardo Wurmus
9bf4bb19c9
gnu: Add r-abaenrichment.
* gnu/packages/bioconductor.scm (r-abaenrichment): New variable.
2019-03-29 17:46:33 +01:00
Ricardo Wurmus
3972cfce6a
gnu: Add r-gofuncr.
* gnu/packages/bioconductor.scm (r-gofuncr): New variable.
2019-03-29 17:46:33 +01:00
Ricardo Wurmus
692bce1595
gnu: Add r-abadata.
* gnu/packages/bioconductor.scm (r-abadata): New variable.
2019-03-29 17:46:33 +01:00
Ricardo Wurmus
32e0f906d7
gnu: Add r-atacseqqc.
* gnu/packages/bioconductor.scm (r-atacseqqc): New variable.
2019-03-29 17:13:45 +01:00
Ricardo Wurmus
e5bff3079d
gnu: Add r-genomicscores.
* gnu/packages/bioconductor.scm (r-genomicscores): New variable.
2019-03-29 17:13:45 +01:00
Ricardo Wurmus
2a72ef561b
gnu: Add r-motifstack.
* gnu/packages/bioconductor.scm (r-motifstack): New variable.
2019-03-29 17:13:45 +01:00
Ricardo Wurmus
229f97c37a
gnu: Add r-motiv.
* gnu/packages/bioconductor.scm (r-motiv): New variable.
2019-03-29 17:13:45 +01:00
Ricardo Wurmus
051e8e1a5b
gnu: Add r-rgadem.
* gnu/packages/bioconductor.scm (r-rgadem): New variable.
2019-03-29 17:13:45 +01:00
Ricardo Wurmus
41aab7d186
gnu: Add r-bacon.
* gnu/packages/bioconductor.scm (r-bacon): New variable.
2019-03-29 17:13:41 +01:00
Ricardo Wurmus
59d331f16a
gnu: Add r-abseqr.
* gnu/packages/bioconductor.scm (r-abseqr): New variable.
2019-03-29 06:35:57 +01:00
Ricardo Wurmus
84ad024e2d
gnu: Add r-a4.
* gnu/packages/bioconductor.scm (r-a4): New variable.
2019-03-28 18:23:23 +01:00
Ricardo Wurmus
dbfe337586
gnu: Add r-a4base.
* gnu/packages/bioconductor.scm (r-a4base): New variable.
2019-03-28 18:23:23 +01:00
Ricardo Wurmus
8e15f86139
gnu: Add r-a4reporting.
* gnu/packages/bioconductor.scm (r-a4reporting): New variable.
2019-03-28 18:23:23 +01:00
Ricardo Wurmus
b8d13e2c0e
gnu: Add r-a4preproc.
* gnu/packages/bioconductor.scm (r-a4preproc): New variable.
2019-03-28 18:23:23 +01:00
Ricardo Wurmus
9ae37581e0
gnu: Add r-a4classif.
* gnu/packages/bioconductor.scm (r-a4classif): New variable.
2019-03-28 18:23:23 +01:00
Ricardo Wurmus
0ec0a5ecc9
gnu: Add r-a4core.
* gnu/packages/bioconductor.scm (r-a4core): New variable.
2019-03-28 18:23:23 +01:00
Ricardo Wurmus
a793e88c5e
gnu: Add r-annaffy.
* gnu/packages/bioconductor.scm (r-annaffy): New variable.
2019-03-28 18:23:23 +01:00
Ricardo Wurmus
ce77562a9e
gnu: Add r-mlinterfaces.
* gnu/packages/bioconductor.scm (r-mlinterfaces): New variable.
2019-03-28 18:23:23 +01:00
Ricardo Wurmus
f8295ee6de
gnu: Add r-clusterprofiler.
* gnu/packages/bioconductor.scm (r-clusterprofiler): New variable.
2019-03-27 16:17:20 +01:00
Ricardo Wurmus
9c30cf65d2
gnu: Add r-enrichplot.
* gnu/packages/bioconductor.scm (r-enrichplot): New variable.
2019-03-27 16:17:20 +01:00
Ricardo Wurmus
305050b56d
gnu: Add r-dose.
* gnu/packages/bioconductor.scm (r-dose): New variable.
2019-03-27 16:17:20 +01:00
Ricardo Wurmus
f8a5af4653
gnu: Add r-do-db.
* gnu/packages/bioconductor.scm (r-do-db): New variable.
2019-03-27 16:17:19 +01:00