Commit graph

258 commits

Author SHA1 Message Date
Ricardo Wurmus
1236ce8e22
gnu: r-genomicinteractions: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-genomicinteractions): Update to 1.18.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus
176a264c7c
gnu: r-interactionset: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-interactionset): Update to 1.12.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus
eff6b2eb12
gnu: r-riboseqr: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-riboseqr): Update to 1.18.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus
7d5acf7a25
gnu: r-riboprofiling: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-riboprofiling): Update to 1.14.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus
1ddd4af5a0
gnu: r-chipcomp: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-chipcomp): Update to 1.14.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus
c38de81594
gnu: r-bayseq: Update to 2.18.0.
* gnu/packages/bioconductor.scm (r-bayseq): Update to 2.18.0.
2019-05-06 00:14:46 +02:00
Ricardo Wurmus
4f4bed7de5
gnu: r-qdnaseq: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-qdnaseq): Update to 1.20.0.
2019-05-06 00:14:46 +02:00
Ricardo Wurmus
2317730994
gnu: r-cghcall: Update to 2.46.0.
* gnu/packages/bioconductor.scm (r-cghcall): Update to 2.46.0.
2019-05-06 00:14:46 +02:00
Ricardo Wurmus
8efb842f11
gnu: r-cghbase: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-cghbase): Update to 1.44.0.
2019-05-06 00:14:46 +02:00
Ricardo Wurmus
bcb95b7aac
gnu: r-marray: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-marray): Update to 1.62.0.
2019-05-06 00:14:46 +02:00
Ricardo Wurmus
a61bcb28f7
gnu: r-graph: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-graph): Update to 1.62.0.
2019-05-06 00:14:46 +02:00
Ricardo Wurmus
588b63c2af
gnu: r-multtest: Update to 2.40.0.
* gnu/packages/bioconductor.scm (r-multtest): Update to 2.40.0.
2019-05-06 00:14:45 +02:00
Ricardo Wurmus
0968a44874
gnu: r-ripseeker: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-ripseeker): Update to 1.24.0.
2019-05-06 00:14:45 +02:00
Ricardo Wurmus
4c221b3bbf
gnu: r-diffbind: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 2.12.0.
[propagated-inputs]: Add r-rhtslib; remove r-zlibbioc.
2019-05-06 00:14:45 +02:00
Ricardo Wurmus
e02162f7ba
gnu: r-qvalue: Update to 2.16.0.
* gnu/packages/bioconductor.scm (r-qvalue): Update to 2.16.0.
2019-05-06 00:14:45 +02:00
Ricardo Wurmus
3e1bc88c1f
gnu: r-geneplotter: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-geneplotter): Update to 1.62.0.
2019-05-06 00:14:45 +02:00
Ricardo Wurmus
4b53d55e98
gnu: r-regioner: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.16.0.
2019-05-06 00:14:45 +02:00
Ricardo Wurmus
43a23a0733
gnu: r-hpar: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-hpar): Update to 1.26.0.
2019-05-06 00:14:44 +02:00
Ricardo Wurmus
0c53332a27
gnu: r-annotate: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-annotate): Update to 1.62.0.
2019-05-06 00:14:44 +02:00
Ricardo Wurmus
81a1c45df5
gnu: r-biocgenerics: Update to 0.30.0.
* gnu/packages/bioconductor.scm (r-biocgenerics): Update to 0.30.0.
2019-05-06 00:14:44 +02:00
Ricardo Wurmus
fbf3494972
gnu: Add r-biocfilecache.
* gnu/packages/bioconductor.scm (r-biocfilecache): New variable.
2019-05-06 00:14:39 +02:00
Ricardo Wurmus
993912905d
gnu: Add r-biocsingular.
* gnu/packages/bioconductor.scm (r-biocsingular): New variable.
2019-05-06 00:14:28 +02:00
Tobias Geerinckx-Rice
9b19734c50
gnu: r-yamss: Fix typo in description.
* gnu/packages/bioconductor.scm (r-yamss)[description]: Fix typo.
2019-04-25 04:42:16 +02:00
Ricardo Wurmus
2da8588ebc
gnu: r-mlinterfaces: Update to 1.62.1.
* gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.62.1.
2019-04-06 23:13:26 +02:00
Ricardo Wurmus
bb94f7257e
gnu: r-inspect: Update to 1.12.2.
* gnu/packages/bioconductor.scm (r-inspect): Update to 1.12.2.
2019-04-06 23:13:26 +02:00
Ricardo Wurmus
307586c1e3
gnu: Add r-arrmnormalization.
* gnu/packages/bioconductor.scm (r-arrmnormalization): New variable.
2019-04-03 17:42:18 +02:00
Ricardo Wurmus
b50c966087
gnu: Add r-arrmdata.
* gnu/packages/bioconductor.scm (r-arrmdata): New variable.
2019-04-03 17:42:18 +02:00
Ricardo Wurmus
5622628fd1
gnu: Add r-progeny.
* gnu/packages/bioconductor.scm (r-progeny): New variable.
2019-04-03 17:42:18 +02:00
Ricardo Wurmus
2bdc88fce7
gnu: Add r-rbowtie2.
* gnu/packages/bioconductor.scm (r-rbowtie2): New variable.
2019-04-03 17:42:18 +02:00
Ricardo Wurmus
9800d859a7
gnu: Add r-zfpkm.
* gnu/packages/bioconductor.scm (r-zfpkm): New variable.
2019-04-03 17:42:18 +02:00
Ricardo Wurmus
6b12f21363
gnu: Add r-webbioc.
* gnu/packages/bioconductor.scm (r-webbioc): New variable.
2019-04-03 17:42:18 +02:00
Ricardo Wurmus
7b5101c5bf
gnu: Add r-widgettools.
* gnu/packages/bioconductor.scm (r-widgettools): New variable.
2019-04-03 17:42:17 +02:00
Ricardo Wurmus
b9b8b447ec
gnu: Add r-wiggleplotr.
* gnu/packages/bioconductor.scm (r-wiggleplotr): New variable.
2019-04-03 17:42:17 +02:00
Ricardo Wurmus
8830664d61
gnu: Add r-wrench.
* gnu/packages/bioconductor.scm (r-wrench): New variable.
2019-04-03 17:42:17 +02:00
Ricardo Wurmus
ec12e53736
gnu: Add r-xcms.
* gnu/packages/bioconductor.scm (r-xcms): New variable.
2019-03-30 08:55:46 +01:00
Ricardo Wurmus
c8310056f4
gnu: Add r-massspecwavelet.
* gnu/packages/bioconductor.scm (r-massspecwavelet): New variable.
2019-03-30 08:55:46 +01:00
Ricardo Wurmus
50d9177051
gnu: Add r-xbseq.
* gnu/packages/bioconductor.scm (r-xbseq): New variable.
2019-03-30 08:55:46 +01:00
Ricardo Wurmus
a6e1eb1a96
gnu: Add r-roar.
* gnu/packages/bioconductor.scm (r-roar): New variable.
2019-03-30 08:55:46 +01:00
Ricardo Wurmus
98a2af31a8
gnu: Add r-yarn.
* gnu/packages/bioconductor.scm (r-yarn): New variable.
2019-03-30 08:55:45 +01:00
Ricardo Wurmus
59cf26292f
gnu: Add r-quantro.
* gnu/packages/bioconductor.scm (r-quantro): New variable.
2019-03-30 08:55:45 +01:00
Ricardo Wurmus
f562c90aa8
gnu: Add r-yaqcaffy.
* gnu/packages/bioconductor.scm (r-yaqcaffy): New variable.
2019-03-30 08:55:45 +01:00
Ricardo Wurmus
4675b3cfa3
gnu: Add r-simpleaffy.
* gnu/packages/bioconductor.scm (r-simpleaffy): New variable.
2019-03-30 08:55:45 +01:00
Ricardo Wurmus
e99380d67b
gnu: Add r-gcrma.
* gnu/packages/bioconductor.scm (r-gcrma): New variable.
2019-03-30 08:55:45 +01:00
Ricardo Wurmus
303f2ed1c6
gnu: Add r-yapsa.
* gnu/packages/bioconductor.scm (r-yapsa): New variable.
2019-03-30 08:55:45 +01:00
Ricardo Wurmus
28098414d0
gnu: Add r-somaticsignatures.
* gnu/packages/bioconductor.scm (r-somaticsignatures): New variable.
2019-03-30 08:55:45 +01:00
Ricardo Wurmus
398c4a9347
gnu: Add r-gtrellis.
* gnu/packages/bioconductor.scm (r-gtrellis): New variable.
2019-03-30 08:55:45 +01:00
Ricardo Wurmus
51e98f7e0f
gnu: Add r-yamss.
* gnu/packages/bioconductor.scm (r-yamss): New variable.
2019-03-29 19:28:11 +01:00
Ricardo Wurmus
5cfa4bff69
gnu: Add r-ebimage.
* gnu/packages/bioconductor.scm (r-ebimage): New variable.
2019-03-29 19:28:03 +01:00
Ricardo Wurmus
ffe7029bab
gnu: Add r-aucell.
* gnu/packages/bioconductor.scm (r-aucell): New variable.
2019-03-29 18:10:46 +01:00
Ricardo Wurmus
f31e10f82e
gnu: Add r-allelicimbalance.
* gnu/packages/bioconductor.scm (r-allelicimbalance): New variable.
2019-03-29 18:07:17 +01:00
Ricardo Wurmus
adf7d8135b
gnu: Add r-annotationtools.
* gnu/packages/bioconductor.scm (r-annotationtools): New variable.
2019-03-29 18:05:45 +01:00
Ricardo Wurmus
0b91b7b969
gnu: Add r-annotationfuncs.
* gnu/packages/bioconductor.scm (r-annotationfuncs): New variable.
2019-03-29 17:49:54 +01:00
Ricardo Wurmus
9bf4bb19c9
gnu: Add r-abaenrichment.
* gnu/packages/bioconductor.scm (r-abaenrichment): New variable.
2019-03-29 17:46:33 +01:00
Ricardo Wurmus
3972cfce6a
gnu: Add r-gofuncr.
* gnu/packages/bioconductor.scm (r-gofuncr): New variable.
2019-03-29 17:46:33 +01:00
Ricardo Wurmus
692bce1595
gnu: Add r-abadata.
* gnu/packages/bioconductor.scm (r-abadata): New variable.
2019-03-29 17:46:33 +01:00
Ricardo Wurmus
32e0f906d7
gnu: Add r-atacseqqc.
* gnu/packages/bioconductor.scm (r-atacseqqc): New variable.
2019-03-29 17:13:45 +01:00
Ricardo Wurmus
e5bff3079d
gnu: Add r-genomicscores.
* gnu/packages/bioconductor.scm (r-genomicscores): New variable.
2019-03-29 17:13:45 +01:00
Ricardo Wurmus
2a72ef561b
gnu: Add r-motifstack.
* gnu/packages/bioconductor.scm (r-motifstack): New variable.
2019-03-29 17:13:45 +01:00
Ricardo Wurmus
229f97c37a
gnu: Add r-motiv.
* gnu/packages/bioconductor.scm (r-motiv): New variable.
2019-03-29 17:13:45 +01:00
Ricardo Wurmus
051e8e1a5b
gnu: Add r-rgadem.
* gnu/packages/bioconductor.scm (r-rgadem): New variable.
2019-03-29 17:13:45 +01:00
Ricardo Wurmus
41aab7d186
gnu: Add r-bacon.
* gnu/packages/bioconductor.scm (r-bacon): New variable.
2019-03-29 17:13:41 +01:00
Ricardo Wurmus
59d331f16a
gnu: Add r-abseqr.
* gnu/packages/bioconductor.scm (r-abseqr): New variable.
2019-03-29 06:35:57 +01:00
Ricardo Wurmus
84ad024e2d
gnu: Add r-a4.
* gnu/packages/bioconductor.scm (r-a4): New variable.
2019-03-28 18:23:23 +01:00
Ricardo Wurmus
dbfe337586
gnu: Add r-a4base.
* gnu/packages/bioconductor.scm (r-a4base): New variable.
2019-03-28 18:23:23 +01:00
Ricardo Wurmus
8e15f86139
gnu: Add r-a4reporting.
* gnu/packages/bioconductor.scm (r-a4reporting): New variable.
2019-03-28 18:23:23 +01:00
Ricardo Wurmus
b8d13e2c0e
gnu: Add r-a4preproc.
* gnu/packages/bioconductor.scm (r-a4preproc): New variable.
2019-03-28 18:23:23 +01:00
Ricardo Wurmus
9ae37581e0
gnu: Add r-a4classif.
* gnu/packages/bioconductor.scm (r-a4classif): New variable.
2019-03-28 18:23:23 +01:00
Ricardo Wurmus
0ec0a5ecc9
gnu: Add r-a4core.
* gnu/packages/bioconductor.scm (r-a4core): New variable.
2019-03-28 18:23:23 +01:00
Ricardo Wurmus
a793e88c5e
gnu: Add r-annaffy.
* gnu/packages/bioconductor.scm (r-annaffy): New variable.
2019-03-28 18:23:23 +01:00
Ricardo Wurmus
ce77562a9e
gnu: Add r-mlinterfaces.
* gnu/packages/bioconductor.scm (r-mlinterfaces): New variable.
2019-03-28 18:23:23 +01:00
Ricardo Wurmus
f8295ee6de
gnu: Add r-clusterprofiler.
* gnu/packages/bioconductor.scm (r-clusterprofiler): New variable.
2019-03-27 16:17:20 +01:00
Ricardo Wurmus
9c30cf65d2
gnu: Add r-enrichplot.
* gnu/packages/bioconductor.scm (r-enrichplot): New variable.
2019-03-27 16:17:20 +01:00
Ricardo Wurmus
305050b56d
gnu: Add r-dose.
* gnu/packages/bioconductor.scm (r-dose): New variable.
2019-03-27 16:17:20 +01:00
Ricardo Wurmus
f8a5af4653
gnu: Add r-do-db.
* gnu/packages/bioconductor.scm (r-do-db): New variable.
2019-03-27 16:17:19 +01:00
Ricardo Wurmus
af26c7ae70
gnu: Add r-fgsea.
* gnu/packages/bioconductor.scm (r-fgsea): New variable.
2019-03-27 16:17:19 +01:00
Ricardo Wurmus
a6d867fed9
gnu: Add r-sigpathway.
* gnu/packages/bioconductor.scm (r-sigpathway): New variable.
2019-03-25 16:20:04 +01:00
Ricardo Wurmus
9d0f794229
gnu: Add r-anota.
* gnu/packages/bioconductor.scm (r-anota): New variable.
2019-03-25 16:20:00 +01:00
Ricardo Wurmus
c04f230eb3
gnu: Add r-gosemsim.
* gnu/packages/bioconductor.scm (r-gosemsim): New variable.
2019-03-25 16:19:52 +01:00
Ricardo Wurmus
3e41919d51
gnu: Add r-heatplus.
* gnu/packages/bioconductor.scm (r-heatplus): New variable.
2019-03-25 16:19:40 +01:00
Ricardo Wurmus
c538bcdd38
gnu: Add r-varianttools.
* gnu/packages/bioconductor.scm (r-varianttools): New variable.
2019-03-25 16:09:16 +01:00
Ricardo Wurmus
8a5460b4fb
gnu: Add r-triform.
* gnu/packages/bioconductor.scm (r-triform): New variable.
2019-03-25 16:09:07 +01:00
Ricardo Wurmus
80eb01c776
gnu: r-gkmsvm: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-gkmsvm): Move from here...
* gnu/packages/bioconductor.scm (r-gkmsvm): ...to here.
2019-03-25 14:34:41 +01:00
Ricardo Wurmus
877fd189c4
gnu: r-annotate: Update to 1.60.1.
* gnu/packages/bioconductor.scm (r-annotate): Update to 1.60.1.
2019-03-20 22:31:59 +01:00
Ricardo Wurmus
e4a17532f9
gnu: Add r-ioniser.
* gnu/packages/bioconductor.scm (r-ioniser): New variable.
2019-03-15 10:58:05 +01:00
Ricardo Wurmus
4291f36a22
gnu: Add r-linnorm.
* gnu/packages/bioconductor.scm (r-linnorm): New variable.
2019-03-13 17:13:21 +01:00
Ricardo Wurmus
9475a248fc
gnu: Add r-illuminahumanmethylationepicmanifest.
* gnu/packages/bioconductor.scm (r-illuminahumanmethylationepicmanifest):
New variable.
2019-03-13 13:49:20 +01:00
Ricardo Wurmus
09605cb2d1
gnu: Add r-lumi.
* gnu/packages/bioconductor.scm (r-lumi): New variable.
2019-03-13 13:35:40 +01:00
Ricardo Wurmus
5ec5ba0272
gnu: Add r-methylumi.
* gnu/packages/bioconductor.scm (r-methylumi): New variable.
2019-03-13 13:35:33 +01:00
Ricardo Wurmus
0f5c9cec50
gnu: Add r-fdb-infiniummethylation-hg19.
* gnu/packages/bioconductor.scm (r-fdb-infiniummethylation-hg19): New variable.
2019-03-13 13:35:18 +01:00
Ricardo Wurmus
0fbaf1956b
gnu: Add r-minfi.
* gnu/packages/bioconductor.scm (r-minfi): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
34a24f95ec
gnu: Add r-bumphunter.
* gnu/packages/bioconductor.scm (r-bumphunter): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
f4eac09653
gnu: Add r-siggenes.
* gnu/packages/bioconductor.scm (r-siggenes): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
eed6ff0358
gnu: Add r-illuminaio.
* gnu/packages/bioconductor.scm (r-illuminaio): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
f9201d6704
gnu: Add r-geoquery.
* gnu/packages/bioconductor.scm (r-geoquery): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
f088775799
gnu: Add r-scone.
* gnu/packages/bioconductor.scm (r-scone): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
b409c3570f
gnu: Add r-scdd.
* gnu/packages/bioconductor.scm (r-scdd): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
6213e44185
gnu: Add r-noiseq.
* gnu/packages/bioconductor.scm (r-noiseq): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
2d7627cfff
gnu: Add r-monocle.
* gnu/packages/bioconductor.scm (r-monocle): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
925fcdbb79
gnu: Add r-mast.
* gnu/packages/bioconductor.scm (r-mast): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
251e08301a
gnu: Add r-icobra.
* gnu/packages/bioconductor.scm (r-icobra): New variable.
2019-03-13 13:17:52 +01:00