Commit graph

456 commits

Author SHA1 Message Date
Ricardo Wurmus
0b6091621f
gnu: r-a4preproc: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-a4preproc): Update to 1.32.0.
2019-05-06 00:14:54 +02:00
Ricardo Wurmus
82de77da5a
gnu: r-a4classif: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-a4classif): Update to 1.32.0.
2019-05-06 00:14:53 +02:00
Ricardo Wurmus
b077e3db2a
gnu: r-a4core: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-a4core): Update to 1.32.0.
2019-05-06 00:14:53 +02:00
Ricardo Wurmus
8bef9df4d4
gnu: r-annaffy: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-annaffy): Update to 1.56.0.
2019-05-06 00:14:53 +02:00
Ricardo Wurmus
8265a1115e
gnu: r-mlinterfaces: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.64.0.
2019-05-06 00:14:53 +02:00
Ricardo Wurmus
1a3e33be23
gnu: r-clusterprofiler: Update to 3.12.0.
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 3.12.0.
2019-05-06 00:14:53 +02:00
Ricardo Wurmus
77d28d665c
gnu: r-enrichplot: Update to 1.4.0.
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.4.0.
2019-05-06 00:14:53 +02:00
Ricardo Wurmus
1990ff9d10
gnu: r-dose: Update to 3.10.0.
* gnu/packages/bioconductor.scm (r-dose): Update to 3.10.0.
2019-05-06 00:14:53 +02:00
Ricardo Wurmus
ebffd24c10
gnu: r-fgsea: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-fgsea): Update to 1.10.0.
[propagated-inputs]: Add r-bh.
2019-05-06 00:14:53 +02:00
Ricardo Wurmus
3e5ee6f69f
gnu: r-sigpathway: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-sigpathway): Update to 1.52.0.
2019-05-06 00:14:53 +02:00
Ricardo Wurmus
0a41b5db95
gnu: r-anota: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-anota): Update to 1.32.0.
2019-05-06 00:14:52 +02:00
Ricardo Wurmus
24cf7bad99
gnu: r-gosemsim: Update to 2.10.0.
* gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.10.0.
2019-05-06 00:14:52 +02:00
Ricardo Wurmus
376d1fe759
gnu: r-heatplus: Update to 2.30.0.
* gnu/packages/bioconductor.scm (r-heatplus): Update to 2.30.0.
2019-05-06 00:14:52 +02:00
Ricardo Wurmus
c2effdedc0
gnu: r-varianttools: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-varianttools): Update to 1.26.0.
2019-05-06 00:14:52 +02:00
Ricardo Wurmus
bc083ecab8
gnu: r-triform: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-triform): Update to 1.26.0.
2019-05-06 00:14:52 +02:00
Ricardo Wurmus
2ee91179d1
gnu: r-ioniser: Update to 2.8.0.
* gnu/packages/bioconductor.scm (r-ioniser): Update to 2.8.0.
2019-05-06 00:14:52 +02:00
Ricardo Wurmus
48c2a7eb39
gnu: r-linnorm: Update to 2.8.0.
* gnu/packages/bioconductor.scm (r-linnorm): Update to 2.8.0.
2019-05-06 00:14:52 +02:00
Ricardo Wurmus
5551b07cde
gnu: r-lumi: Update to 2.36.0.
* gnu/packages/bioconductor.scm (r-lumi): Update to 2.36.0.
2019-05-06 00:14:51 +02:00
Ricardo Wurmus
2986b51ffe
gnu: r-methylumi: Update to 2.30.0.
* gnu/packages/bioconductor.scm (r-methylumi): Update to 2.30.0.
2019-05-06 00:14:51 +02:00
Ricardo Wurmus
8c0fae3cd4
gnu: r-minfi: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-minfi): Update to 1.30.0.
2019-05-06 00:14:51 +02:00
Ricardo Wurmus
693a98056c
gnu: r-bumphunter: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-bumphunter): Update to 1.26.0.
2019-05-06 00:14:51 +02:00
Ricardo Wurmus
409f4dd652
gnu: r-siggenes: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-siggenes): Update to 1.58.0.
[propagated-inputs]: Add r-scrime.
2019-05-06 00:14:51 +02:00
Ricardo Wurmus
fadc6db82d
gnu: r-illuminaio: Update to 0.26.0.
* gnu/packages/bioconductor.scm (r-illuminaio): Update to 0.26.0.
2019-05-06 00:14:51 +02:00
Ricardo Wurmus
2d4430877a
gnu: r-geoquery: Update to 2.52.0.
* gnu/packages/bioconductor.scm (r-geoquery): Update to 2.52.0.
2019-05-06 00:14:51 +02:00
Ricardo Wurmus
26c72fffc1
gnu: r-scone: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-scone): Update to 1.8.0.
2019-05-06 00:14:50 +02:00
Ricardo Wurmus
7baa59ed4d
gnu: r-scdd: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-scdd): Update to 1.8.0.
2019-05-06 00:14:50 +02:00
Ricardo Wurmus
6a2c58b7e0
gnu: r-noiseq: Update to 2.28.0.
* gnu/packages/bioconductor.scm (r-noiseq): Update to 2.28.0.
2019-05-06 00:14:50 +02:00
Ricardo Wurmus
78b6326785
gnu: r-monocle: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-monocle): Update to 2.12.0.
2019-05-06 00:14:50 +02:00
Ricardo Wurmus
a0ff725d6a
gnu: r-mast: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-mast): Update to 1.10.0.
[propagated-inputs]: Add r-blme.
2019-05-06 00:14:50 +02:00
Ricardo Wurmus
3fd2ea8883
gnu: r-icobra: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-icobra): Update to 1.12.0.
2019-05-06 00:14:50 +02:00
Ricardo Wurmus
bcd8b7a9bd
gnu: r-ihw: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-ihw): Update to 1.12.0.
2019-05-06 00:14:50 +02:00
Ricardo Wurmus
61c79d55e3
gnu: r-lpsymphony: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-lpsymphony): Update to 1.12.0.
2019-05-06 00:14:49 +02:00
Ricardo Wurmus
4a3c47e940
gnu: r-ebseq: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-ebseq): Update to 1.24.0.
2019-05-06 00:14:49 +02:00
Ricardo Wurmus
301c4ff12a
gnu: r-deds: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-deds): Update to 1.58.0.
2019-05-06 00:14:49 +02:00
Ricardo Wurmus
d5f3c0d09e
gnu: r-dnacopy: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-dnacopy): Update to 1.58.0.
2019-05-06 00:14:49 +02:00
Ricardo Wurmus
d941918599
gnu: r-copynumber: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-copynumber): Update to 1.24.0.
2019-05-06 00:14:49 +02:00
Ricardo Wurmus
58a43fc28e
gnu: r-chipexoqual: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-chipexoqual): Update to 1.8.0.
2019-05-06 00:14:49 +02:00
Ricardo Wurmus
8d3d0c3abe
gnu: r-savr: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-savr): Update to 1.22.0.
2019-05-06 00:14:49 +02:00
Ricardo Wurmus
0aa72f2d1e
gnu: r-destiny: Update to 2.14.0.
* gnu/packages/bioconductor.scm (r-destiny): Update to 2.14.0.
[propagated-inputs]: Remove r-fnn and r-hmisc; add r-ggplot2.
2019-05-06 00:14:48 +02:00
Ricardo Wurmus
6fc161fc3e
gnu: r-biocneighbors: Update to 1.2.0.
* gnu/packages/bioconductor.scm (r-biocneighbors): Update to 1.2.0.
[propagated-inputs]: Add r-biocgenerics and r-rcpphnsw.
2019-05-06 00:14:48 +02:00
Ricardo Wurmus
d8771f5fd6
gnu: r-ruvseq: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-ruvseq): Update to 1.18.0.
2019-05-06 00:14:48 +02:00
Ricardo Wurmus
774e499cec
gnu: r-dnabarcodes: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-dnabarcodes): Update to 1.14.0.
2019-05-06 00:14:48 +02:00
Ricardo Wurmus
3649d046a6
gnu: r-inspect: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-inspect): Update to 1.14.0.
2019-05-06 00:14:48 +02:00
Ricardo Wurmus
5dce71535f
gnu: r-plgem: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-plgem): Update to 1.56.0.
2019-05-06 00:14:48 +02:00
Ricardo Wurmus
5bf7eb49f6
gnu: r-rots: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-rots): Update to 1.12.0.
2019-05-06 00:14:48 +02:00
Ricardo Wurmus
07252952b7
gnu: r-glimma: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-glimma): Update to 1.12.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus
40f0ee43a0
gnu: r-goseq: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-goseq): Update to 1.36.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus
7a5d729af1
gnu: r-ctc: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-ctc): Update to 1.58.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus
1236ce8e22
gnu: r-genomicinteractions: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-genomicinteractions): Update to 1.18.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus
176a264c7c
gnu: r-interactionset: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-interactionset): Update to 1.12.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus
eff6b2eb12
gnu: r-riboseqr: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-riboseqr): Update to 1.18.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus
7d5acf7a25
gnu: r-riboprofiling: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-riboprofiling): Update to 1.14.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus
1ddd4af5a0
gnu: r-chipcomp: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-chipcomp): Update to 1.14.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus
c38de81594
gnu: r-bayseq: Update to 2.18.0.
* gnu/packages/bioconductor.scm (r-bayseq): Update to 2.18.0.
2019-05-06 00:14:46 +02:00
Ricardo Wurmus
4f4bed7de5
gnu: r-qdnaseq: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-qdnaseq): Update to 1.20.0.
2019-05-06 00:14:46 +02:00
Ricardo Wurmus
2317730994
gnu: r-cghcall: Update to 2.46.0.
* gnu/packages/bioconductor.scm (r-cghcall): Update to 2.46.0.
2019-05-06 00:14:46 +02:00
Ricardo Wurmus
8efb842f11
gnu: r-cghbase: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-cghbase): Update to 1.44.0.
2019-05-06 00:14:46 +02:00
Ricardo Wurmus
bcb95b7aac
gnu: r-marray: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-marray): Update to 1.62.0.
2019-05-06 00:14:46 +02:00
Ricardo Wurmus
a61bcb28f7
gnu: r-graph: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-graph): Update to 1.62.0.
2019-05-06 00:14:46 +02:00
Ricardo Wurmus
588b63c2af
gnu: r-multtest: Update to 2.40.0.
* gnu/packages/bioconductor.scm (r-multtest): Update to 2.40.0.
2019-05-06 00:14:45 +02:00
Ricardo Wurmus
0968a44874
gnu: r-ripseeker: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-ripseeker): Update to 1.24.0.
2019-05-06 00:14:45 +02:00
Ricardo Wurmus
4c221b3bbf
gnu: r-diffbind: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 2.12.0.
[propagated-inputs]: Add r-rhtslib; remove r-zlibbioc.
2019-05-06 00:14:45 +02:00
Ricardo Wurmus
e02162f7ba
gnu: r-qvalue: Update to 2.16.0.
* gnu/packages/bioconductor.scm (r-qvalue): Update to 2.16.0.
2019-05-06 00:14:45 +02:00
Ricardo Wurmus
3e1bc88c1f
gnu: r-geneplotter: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-geneplotter): Update to 1.62.0.
2019-05-06 00:14:45 +02:00
Ricardo Wurmus
4b53d55e98
gnu: r-regioner: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.16.0.
2019-05-06 00:14:45 +02:00
Ricardo Wurmus
43a23a0733
gnu: r-hpar: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-hpar): Update to 1.26.0.
2019-05-06 00:14:44 +02:00
Ricardo Wurmus
0c53332a27
gnu: r-annotate: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-annotate): Update to 1.62.0.
2019-05-06 00:14:44 +02:00
Ricardo Wurmus
81a1c45df5
gnu: r-biocgenerics: Update to 0.30.0.
* gnu/packages/bioconductor.scm (r-biocgenerics): Update to 0.30.0.
2019-05-06 00:14:44 +02:00
Ricardo Wurmus
fbf3494972
gnu: Add r-biocfilecache.
* gnu/packages/bioconductor.scm (r-biocfilecache): New variable.
2019-05-06 00:14:39 +02:00
Ricardo Wurmus
993912905d
gnu: Add r-biocsingular.
* gnu/packages/bioconductor.scm (r-biocsingular): New variable.
2019-05-06 00:14:28 +02:00
Tobias Geerinckx-Rice
9b19734c50
gnu: r-yamss: Fix typo in description.
* gnu/packages/bioconductor.scm (r-yamss)[description]: Fix typo.
2019-04-25 04:42:16 +02:00
Ricardo Wurmus
2da8588ebc
gnu: r-mlinterfaces: Update to 1.62.1.
* gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.62.1.
2019-04-06 23:13:26 +02:00
Ricardo Wurmus
bb94f7257e
gnu: r-inspect: Update to 1.12.2.
* gnu/packages/bioconductor.scm (r-inspect): Update to 1.12.2.
2019-04-06 23:13:26 +02:00
Ricardo Wurmus
307586c1e3
gnu: Add r-arrmnormalization.
* gnu/packages/bioconductor.scm (r-arrmnormalization): New variable.
2019-04-03 17:42:18 +02:00
Ricardo Wurmus
b50c966087
gnu: Add r-arrmdata.
* gnu/packages/bioconductor.scm (r-arrmdata): New variable.
2019-04-03 17:42:18 +02:00
Ricardo Wurmus
5622628fd1
gnu: Add r-progeny.
* gnu/packages/bioconductor.scm (r-progeny): New variable.
2019-04-03 17:42:18 +02:00
Ricardo Wurmus
2bdc88fce7
gnu: Add r-rbowtie2.
* gnu/packages/bioconductor.scm (r-rbowtie2): New variable.
2019-04-03 17:42:18 +02:00
Ricardo Wurmus
9800d859a7
gnu: Add r-zfpkm.
* gnu/packages/bioconductor.scm (r-zfpkm): New variable.
2019-04-03 17:42:18 +02:00
Ricardo Wurmus
6b12f21363
gnu: Add r-webbioc.
* gnu/packages/bioconductor.scm (r-webbioc): New variable.
2019-04-03 17:42:18 +02:00
Ricardo Wurmus
7b5101c5bf
gnu: Add r-widgettools.
* gnu/packages/bioconductor.scm (r-widgettools): New variable.
2019-04-03 17:42:17 +02:00
Ricardo Wurmus
b9b8b447ec
gnu: Add r-wiggleplotr.
* gnu/packages/bioconductor.scm (r-wiggleplotr): New variable.
2019-04-03 17:42:17 +02:00
Ricardo Wurmus
8830664d61
gnu: Add r-wrench.
* gnu/packages/bioconductor.scm (r-wrench): New variable.
2019-04-03 17:42:17 +02:00
Ricardo Wurmus
ec12e53736
gnu: Add r-xcms.
* gnu/packages/bioconductor.scm (r-xcms): New variable.
2019-03-30 08:55:46 +01:00
Ricardo Wurmus
c8310056f4
gnu: Add r-massspecwavelet.
* gnu/packages/bioconductor.scm (r-massspecwavelet): New variable.
2019-03-30 08:55:46 +01:00
Ricardo Wurmus
50d9177051
gnu: Add r-xbseq.
* gnu/packages/bioconductor.scm (r-xbseq): New variable.
2019-03-30 08:55:46 +01:00
Ricardo Wurmus
a6e1eb1a96
gnu: Add r-roar.
* gnu/packages/bioconductor.scm (r-roar): New variable.
2019-03-30 08:55:46 +01:00
Ricardo Wurmus
98a2af31a8
gnu: Add r-yarn.
* gnu/packages/bioconductor.scm (r-yarn): New variable.
2019-03-30 08:55:45 +01:00
Ricardo Wurmus
59cf26292f
gnu: Add r-quantro.
* gnu/packages/bioconductor.scm (r-quantro): New variable.
2019-03-30 08:55:45 +01:00
Ricardo Wurmus
f562c90aa8
gnu: Add r-yaqcaffy.
* gnu/packages/bioconductor.scm (r-yaqcaffy): New variable.
2019-03-30 08:55:45 +01:00
Ricardo Wurmus
4675b3cfa3
gnu: Add r-simpleaffy.
* gnu/packages/bioconductor.scm (r-simpleaffy): New variable.
2019-03-30 08:55:45 +01:00
Ricardo Wurmus
e99380d67b
gnu: Add r-gcrma.
* gnu/packages/bioconductor.scm (r-gcrma): New variable.
2019-03-30 08:55:45 +01:00
Ricardo Wurmus
303f2ed1c6
gnu: Add r-yapsa.
* gnu/packages/bioconductor.scm (r-yapsa): New variable.
2019-03-30 08:55:45 +01:00
Ricardo Wurmus
28098414d0
gnu: Add r-somaticsignatures.
* gnu/packages/bioconductor.scm (r-somaticsignatures): New variable.
2019-03-30 08:55:45 +01:00
Ricardo Wurmus
398c4a9347
gnu: Add r-gtrellis.
* gnu/packages/bioconductor.scm (r-gtrellis): New variable.
2019-03-30 08:55:45 +01:00
Ricardo Wurmus
51e98f7e0f
gnu: Add r-yamss.
* gnu/packages/bioconductor.scm (r-yamss): New variable.
2019-03-29 19:28:11 +01:00
Ricardo Wurmus
5cfa4bff69
gnu: Add r-ebimage.
* gnu/packages/bioconductor.scm (r-ebimage): New variable.
2019-03-29 19:28:03 +01:00
Ricardo Wurmus
ffe7029bab
gnu: Add r-aucell.
* gnu/packages/bioconductor.scm (r-aucell): New variable.
2019-03-29 18:10:46 +01:00
Ricardo Wurmus
f31e10f82e
gnu: Add r-allelicimbalance.
* gnu/packages/bioconductor.scm (r-allelicimbalance): New variable.
2019-03-29 18:07:17 +01:00
Ricardo Wurmus
adf7d8135b
gnu: Add r-annotationtools.
* gnu/packages/bioconductor.scm (r-annotationtools): New variable.
2019-03-29 18:05:45 +01:00
Ricardo Wurmus
0b91b7b969
gnu: Add r-annotationfuncs.
* gnu/packages/bioconductor.scm (r-annotationfuncs): New variable.
2019-03-29 17:49:54 +01:00
Ricardo Wurmus
9bf4bb19c9
gnu: Add r-abaenrichment.
* gnu/packages/bioconductor.scm (r-abaenrichment): New variable.
2019-03-29 17:46:33 +01:00
Ricardo Wurmus
3972cfce6a
gnu: Add r-gofuncr.
* gnu/packages/bioconductor.scm (r-gofuncr): New variable.
2019-03-29 17:46:33 +01:00
Ricardo Wurmus
692bce1595
gnu: Add r-abadata.
* gnu/packages/bioconductor.scm (r-abadata): New variable.
2019-03-29 17:46:33 +01:00
Ricardo Wurmus
32e0f906d7
gnu: Add r-atacseqqc.
* gnu/packages/bioconductor.scm (r-atacseqqc): New variable.
2019-03-29 17:13:45 +01:00
Ricardo Wurmus
e5bff3079d
gnu: Add r-genomicscores.
* gnu/packages/bioconductor.scm (r-genomicscores): New variable.
2019-03-29 17:13:45 +01:00
Ricardo Wurmus
2a72ef561b
gnu: Add r-motifstack.
* gnu/packages/bioconductor.scm (r-motifstack): New variable.
2019-03-29 17:13:45 +01:00
Ricardo Wurmus
229f97c37a
gnu: Add r-motiv.
* gnu/packages/bioconductor.scm (r-motiv): New variable.
2019-03-29 17:13:45 +01:00
Ricardo Wurmus
051e8e1a5b
gnu: Add r-rgadem.
* gnu/packages/bioconductor.scm (r-rgadem): New variable.
2019-03-29 17:13:45 +01:00
Ricardo Wurmus
41aab7d186
gnu: Add r-bacon.
* gnu/packages/bioconductor.scm (r-bacon): New variable.
2019-03-29 17:13:41 +01:00
Ricardo Wurmus
59d331f16a
gnu: Add r-abseqr.
* gnu/packages/bioconductor.scm (r-abseqr): New variable.
2019-03-29 06:35:57 +01:00
Ricardo Wurmus
84ad024e2d
gnu: Add r-a4.
* gnu/packages/bioconductor.scm (r-a4): New variable.
2019-03-28 18:23:23 +01:00
Ricardo Wurmus
dbfe337586
gnu: Add r-a4base.
* gnu/packages/bioconductor.scm (r-a4base): New variable.
2019-03-28 18:23:23 +01:00
Ricardo Wurmus
8e15f86139
gnu: Add r-a4reporting.
* gnu/packages/bioconductor.scm (r-a4reporting): New variable.
2019-03-28 18:23:23 +01:00
Ricardo Wurmus
b8d13e2c0e
gnu: Add r-a4preproc.
* gnu/packages/bioconductor.scm (r-a4preproc): New variable.
2019-03-28 18:23:23 +01:00
Ricardo Wurmus
9ae37581e0
gnu: Add r-a4classif.
* gnu/packages/bioconductor.scm (r-a4classif): New variable.
2019-03-28 18:23:23 +01:00
Ricardo Wurmus
0ec0a5ecc9
gnu: Add r-a4core.
* gnu/packages/bioconductor.scm (r-a4core): New variable.
2019-03-28 18:23:23 +01:00
Ricardo Wurmus
a793e88c5e
gnu: Add r-annaffy.
* gnu/packages/bioconductor.scm (r-annaffy): New variable.
2019-03-28 18:23:23 +01:00
Ricardo Wurmus
ce77562a9e
gnu: Add r-mlinterfaces.
* gnu/packages/bioconductor.scm (r-mlinterfaces): New variable.
2019-03-28 18:23:23 +01:00
Ricardo Wurmus
f8295ee6de
gnu: Add r-clusterprofiler.
* gnu/packages/bioconductor.scm (r-clusterprofiler): New variable.
2019-03-27 16:17:20 +01:00
Ricardo Wurmus
9c30cf65d2
gnu: Add r-enrichplot.
* gnu/packages/bioconductor.scm (r-enrichplot): New variable.
2019-03-27 16:17:20 +01:00
Ricardo Wurmus
305050b56d
gnu: Add r-dose.
* gnu/packages/bioconductor.scm (r-dose): New variable.
2019-03-27 16:17:20 +01:00
Ricardo Wurmus
f8a5af4653
gnu: Add r-do-db.
* gnu/packages/bioconductor.scm (r-do-db): New variable.
2019-03-27 16:17:19 +01:00
Ricardo Wurmus
af26c7ae70
gnu: Add r-fgsea.
* gnu/packages/bioconductor.scm (r-fgsea): New variable.
2019-03-27 16:17:19 +01:00
Ricardo Wurmus
a6d867fed9
gnu: Add r-sigpathway.
* gnu/packages/bioconductor.scm (r-sigpathway): New variable.
2019-03-25 16:20:04 +01:00
Ricardo Wurmus
9d0f794229
gnu: Add r-anota.
* gnu/packages/bioconductor.scm (r-anota): New variable.
2019-03-25 16:20:00 +01:00
Ricardo Wurmus
c04f230eb3
gnu: Add r-gosemsim.
* gnu/packages/bioconductor.scm (r-gosemsim): New variable.
2019-03-25 16:19:52 +01:00
Ricardo Wurmus
3e41919d51
gnu: Add r-heatplus.
* gnu/packages/bioconductor.scm (r-heatplus): New variable.
2019-03-25 16:19:40 +01:00
Ricardo Wurmus
c538bcdd38
gnu: Add r-varianttools.
* gnu/packages/bioconductor.scm (r-varianttools): New variable.
2019-03-25 16:09:16 +01:00
Ricardo Wurmus
8a5460b4fb
gnu: Add r-triform.
* gnu/packages/bioconductor.scm (r-triform): New variable.
2019-03-25 16:09:07 +01:00
Ricardo Wurmus
80eb01c776
gnu: r-gkmsvm: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-gkmsvm): Move from here...
* gnu/packages/bioconductor.scm (r-gkmsvm): ...to here.
2019-03-25 14:34:41 +01:00
Ricardo Wurmus
877fd189c4
gnu: r-annotate: Update to 1.60.1.
* gnu/packages/bioconductor.scm (r-annotate): Update to 1.60.1.
2019-03-20 22:31:59 +01:00
Ricardo Wurmus
e4a17532f9
gnu: Add r-ioniser.
* gnu/packages/bioconductor.scm (r-ioniser): New variable.
2019-03-15 10:58:05 +01:00
Ricardo Wurmus
4291f36a22
gnu: Add r-linnorm.
* gnu/packages/bioconductor.scm (r-linnorm): New variable.
2019-03-13 17:13:21 +01:00
Ricardo Wurmus
9475a248fc
gnu: Add r-illuminahumanmethylationepicmanifest.
* gnu/packages/bioconductor.scm (r-illuminahumanmethylationepicmanifest):
New variable.
2019-03-13 13:49:20 +01:00
Ricardo Wurmus
09605cb2d1
gnu: Add r-lumi.
* gnu/packages/bioconductor.scm (r-lumi): New variable.
2019-03-13 13:35:40 +01:00
Ricardo Wurmus
5ec5ba0272
gnu: Add r-methylumi.
* gnu/packages/bioconductor.scm (r-methylumi): New variable.
2019-03-13 13:35:33 +01:00
Ricardo Wurmus
0f5c9cec50
gnu: Add r-fdb-infiniummethylation-hg19.
* gnu/packages/bioconductor.scm (r-fdb-infiniummethylation-hg19): New variable.
2019-03-13 13:35:18 +01:00
Ricardo Wurmus
0fbaf1956b
gnu: Add r-minfi.
* gnu/packages/bioconductor.scm (r-minfi): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
34a24f95ec
gnu: Add r-bumphunter.
* gnu/packages/bioconductor.scm (r-bumphunter): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
f4eac09653
gnu: Add r-siggenes.
* gnu/packages/bioconductor.scm (r-siggenes): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
eed6ff0358
gnu: Add r-illuminaio.
* gnu/packages/bioconductor.scm (r-illuminaio): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
f9201d6704
gnu: Add r-geoquery.
* gnu/packages/bioconductor.scm (r-geoquery): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
f088775799
gnu: Add r-scone.
* gnu/packages/bioconductor.scm (r-scone): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
b409c3570f
gnu: Add r-scdd.
* gnu/packages/bioconductor.scm (r-scdd): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
6213e44185
gnu: Add r-noiseq.
* gnu/packages/bioconductor.scm (r-noiseq): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
2d7627cfff
gnu: Add r-monocle.
* gnu/packages/bioconductor.scm (r-monocle): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
925fcdbb79
gnu: Add r-mast.
* gnu/packages/bioconductor.scm (r-mast): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
251e08301a
gnu: Add r-icobra.
* gnu/packages/bioconductor.scm (r-icobra): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
704de8f5ee
gnu: Add r-ihw.
* gnu/packages/bioconductor.scm (r-ihw): New variable.
2019-03-13 13:17:51 +01:00
Ricardo Wurmus
2cb71d81a4
gnu: Add r-lpsymphony.
* gnu/packages/bioconductor.scm (r-lpsymphony): New variable.
2019-03-13 13:17:51 +01:00
Ricardo Wurmus
3087a2f37b
gnu: Add r-ebseq.
* gnu/packages/bioconductor.scm (r-ebseq): New variable.
2019-03-13 13:17:51 +01:00
Ricardo Wurmus
7ed869f796
gnu: Add r-nbpseq.
* gnu/packages/bioconductor.scm (r-nbpseq): New variable.
2019-03-13 13:17:51 +01:00
Ricardo Wurmus
173c99601a
gnu: Add r-deds.
* gnu/packages/bioconductor.scm (r-deds): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus
4dc2ecc279
gnu: r-qvalue: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-qvalue): Move from here...
* gnu/packages/bioconductor.scm (r-qvalue): ...to here.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus
557a1089c6
gnu: Add r-hsmmsinglecell.
* gnu/packages/bioconductor.scm (r-hsmmsinglecell): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus
daeb3cd98c
gnu: r-genelendatabase: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-genelendatabase): Update to 1.18.0.
2019-03-08 09:30:00 +01:00
Ricardo Wurmus
8035819f4c
gnu: r-org-mm-eg-db: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-org-mm-eg-db): Move from here...
* gnu/packages/bioconductor.scm (r-org-mm-eg-db): ...to here.
2019-03-06 21:43:33 +01:00
Ricardo Wurmus
d56df35a25
gnu: r-org-hs-eg-db: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-org-hs-eg-db): Move from here...
* gnu/packages/bioconductor.scm (r-org-hs-eg-db): ...to here.
2019-03-06 21:42:39 +01:00
Ricardo Wurmus
f8780e96ff
gnu: r-org-dm-eg-db: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-org-dm-eg-db): Move from here...
* gnu/packages/bioconductor.scm (r-org-dm-eg-db): ...to here.
2019-03-06 21:41:48 +01:00
Ricardo Wurmus
3a08940e1a
gnu: r-org-ce-eg-db: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-org-ce-eg-db): Move from here...
* gnu/packages/bioconductor.scm (r-org-ce-eg-db): ...to here.
2019-03-06 21:35:20 +01:00
Ricardo Wurmus
7bc5d1b0e1
gnu: r-txdb-mmusculus-ucsc-mm10-knowngene: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-txdb-mmusculus-ucsc-mm10-knowngene):
Move from here...
* gnu/packages/bioconductor.scm (r-txdb-mmusculus-ucsc-mm10-knowngene):
...to here.
2019-03-06 21:33:17 +01:00
Ricardo Wurmus
13dabd6947
gnu: r-bsgenome-dmelanogaster-ucsc-dm3: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-bsgenome-dmelanogaster-ucsc-dm3):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-dmelanogaster-ucsc-dm3):
...to here.
2019-03-06 21:31:41 +01:00
Ricardo Wurmus
0c792ffbd1
gnu: r-bsgenome-celegans-ucsc-ce10: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-bsgenome-celegans-ucsc-ce10):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-celegans-ucsc-ce10): ...to here.
2019-03-06 21:30:30 +01:00
Ricardo Wurmus
b7d93cf508
gnu: r-bsgenome-celegans-ucsc-ce6: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-bsgenome-celegans-ucsc-ce6):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-celegans-ucsc-ce6): ...to here.
2019-03-06 21:29:20 +01:00
Ricardo Wurmus
c3adc83054
gnu: r-bsgenome-mmusculus-ucsc-mm10: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-bsgenome-mmusculus-ucsc-mm10):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm10): ...to here.
2019-03-06 21:26:54 +01:00
Ricardo Wurmus
5acb9052cf
gnu: r-bsgenome-mmusculus-ucsc-mm9: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-bsgenome-mmusculus-ucsc-mm9):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm9): ...to here.
2019-03-06 21:25:18 +01:00
Ricardo Wurmus
fe0b76e215
gnu: r-bsgenome-hsapiens-ucsc-hg19: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-bsgenome-hsapiens-ucsc-hg19):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ucsc-hg19): ...to here.
2019-03-06 21:23:42 +01:00
Ricardo Wurmus
40a6505711
gnu: r-bsgenome-hsapiens-1000genomes-hs37d5: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-bsgenome-hsapiens-1000genomes-hs37d5):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-1000genomes-hs37d5):
...to here.
2019-03-06 21:23:20 +01:00
Ricardo Wurmus
66e35ce63b
gnu: r-txdb-hsapiens-ucsc-hg19-knowngene: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-txdb-hsapiens-ucsc-hg19-knowngene): Move
from here...
* gnu/packages/bioconductor.scm (r-txdb-hsapiens-ucsc-hg19-knowngene): ...to
here.
2019-03-06 21:16:33 +01:00
Ricardo Wurmus
bfb93b4889
gnu: r-geneplotter: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-geneplotter): Move from here...
* gnu/packages/bioconductor.scm (r-geneplotter): ...to here.
2019-03-06 21:13:38 +01:00
Ricardo Wurmus
3d13b448e5
gnu: r-copynumber: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-copynumber): Move from here...
* gnu/packages/bioconductor.scm (r-copynumber): ...to here.
2019-03-06 21:07:49 +01:00
Ricardo Wurmus
6aa896d82e
gnu: Update copyright headers.
This is a follow-up to commit 1fe9a36173.

* gnu/packages/bioconductor.scm: Update copyright header to account for moved
package.
2019-03-06 21:07:49 +01:00
Ricardo Wurmus
3dad6087be
gnu: Add r-org-dr-eg-db.
* gnu/packages/bioconductor.scm (r-org-dr-eg-db): New variable.
2019-03-06 10:29:25 +01:00
Ricardo Wurmus
3a0babacdc
gnu: Add r-htscluster.
* gnu/packages/bioconductor.scm (r-htscluster): New variable.
2019-03-04 15:00:18 +01:00
Ricardo Wurmus
c18dccffa2
gnu: Add r-dnacopy.
* gnu/packages/bioconductor.scm (r-dnacopy): New variable.
2019-02-12 15:41:02 +01:00
Ricardo Wurmus
14bba460ab
gnu: r-biocgenerics: Move to bioconductor.
* gnu/packages/bioinformatics.scm (r-biocgenerics): Move from here...
* gnu/packages/bioconductor.scm (r-biocgenerics): ...to here.
2019-01-13 13:04:18 +01:00
Ricardo Wurmus
7097c7009d
gnu: r-annotate: Move to bioconductor.
* gnu/packages/bioinformatics.scm (r-annotate): Move from here...
* gnu/packages/bioconductor.scm (r-annotate): ...to here.
2019-01-13 13:04:18 +01:00
Ricardo Wurmus
c6e9b494e8
gnu: r-ruvseq: Update to 1.16.1.
* gnu/packages/bioconductor.scm (r-ruvseq): Update to 1.16.1.
2019-01-12 23:35:19 +01:00
Ricardo Wurmus
c86fc96987
gnu: r-inspect: Update to 1.12.1.
* gnu/packages/bioconductor.scm (r-inspect): Update to 1.12.1.
[propagated-inputs]: Add r-deseq2, r-plgem, r-shiny, r-summarizedexperiment,
and r-txdb-mmusculus-ucsc-mm9-knowngene.
2019-01-12 23:35:19 +01:00
Ricardo Wurmus
d220babf34
gnu: Add r-txdb-mmusculus-ucsc-mm9-knowngene.
* gnu/packages/bioconductor.scm (r-txdb-mmusculus-ucsc-mm9-knowngene): New
variable.
2019-01-12 23:35:19 +01:00
Ricardo Wurmus
cad6fb2dec
gnu: Add r-plgem.
* gnu/packages/bioconductor.scm (r-plgem): New variable.
2019-01-12 23:35:19 +01:00
Ricardo Wurmus
45dcd7dcfd
gnu: r-rots: Update to 1.10.1.
* gnu/packages/bioconductor.scm (r-rots): Update to 1.10.1.
2019-01-12 23:35:19 +01:00
Ricardo Wurmus
0b469ee225
gnu: r-glimma: Update to 1.10.1.
* gnu/packages/bioconductor.scm (r-glimma): Update to 1.10.1.
2019-01-12 23:35:19 +01:00
Ricardo Wurmus
7f2b1c4af0
gnu: r-goseq: Update to 1.34.1.
* gnu/packages/bioconductor.scm (r-goseq): Update to 1.34.1.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus
add2b19561
gnu: r-chippeakanno: Update to 3.16.1.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.16.1.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus
41ffc214e4
gnu: Add r-chipexoqual.
* gnu/packages/bioconductor.scm (r-chipexoqual): New variable.
2018-11-27 23:56:23 +01:00
Ricardo Wurmus
a961ae469c
gnu: Add r-destiny.
* gnu/packages/bioconductor.scm (r-destiny): New variable.
2018-11-09 17:15:31 +01:00
Ricardo Wurmus
8a587c89af
gnu: Add r-savr.
* gnu/packages/bioconductor.scm (r-savr): New variable.
2018-11-09 16:45:21 +01:00
Ricardo Wurmus
d639d8884c
gnu: r-regioner: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.14.0.
[propagated-inputs]: Add r-biostrings.
2018-11-07 12:26:33 +01:00
Ricardo Wurmus
ed35d7ca1f
gnu: r-ruvseq: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-ruvseq): Update to 1.16.0.
2018-11-07 12:26:33 +01:00
Ricardo Wurmus
286157dc49
gnu: Add r-biocneighbors.
* gnu/packages/bioconductor.scm (r-biocneighbors): New variable.
2018-11-07 12:26:33 +01:00
Ricardo Wurmus
318bcbc451
gnu: r-dnabarcodes: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-dnabarcodes): Update to 1.12.0.
2018-11-07 12:26:32 +01:00
Ricardo Wurmus
6f1e1d0f88
gnu: r-inspect: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-inspect): Update to 1.12.0.
2018-11-07 12:26:32 +01:00
Ricardo Wurmus
c348cfed74
gnu: r-rots: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-rots): Update to 1.10.0.
2018-11-07 12:26:32 +01:00
Ricardo Wurmus
016afac30f
gnu: r-glimma: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-glimma): Update to 1.10.0.
2018-11-07 12:26:32 +01:00
Ricardo Wurmus
6ea9ae9c39
gnu: r-goseq: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-goseq): Update to 1.34.0.
2018-11-07 12:26:32 +01:00
Ricardo Wurmus
b858338c76
gnu: r-ctc: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-ctc): Update to 1.56.0.
2018-11-07 12:26:32 +01:00
Ricardo Wurmus
5f2d0e635e
gnu: r-genomicinteractions: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-genomicinteractions): Update to 1.16.0.
2018-11-07 12:26:32 +01:00
Ricardo Wurmus
bbc4787cf2
gnu: r-interactionset: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-interactionset): Update to 1.10.0.
2018-11-07 12:26:32 +01:00
Ricardo Wurmus
c4fed658a9
gnu: r-riboseqr: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-riboseqr): Update to 1.16.0.
2018-11-07 12:26:32 +01:00
Ricardo Wurmus
e22e462b33
gnu: r-riboprofiling: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-riboprofiling): Update to 1.12.0.
2018-11-07 12:26:32 +01:00
Ricardo Wurmus
e9427b2c78
gnu: r-ripseeker: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-ripseeker): Update to 1.22.0.
2018-11-07 12:26:32 +01:00
Ricardo Wurmus
aa802eafb6
gnu: r-chipcomp: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-chipcomp): Update to 1.12.0.
2018-11-07 12:26:32 +01:00
Ricardo Wurmus
4728e27511
gnu: r-bayseq: Update to 2.16.0.
* gnu/packages/bioconductor.scm (r-bayseq): Update to 2.16.0.
2018-11-07 12:26:32 +01:00
Ricardo Wurmus
57d2fcd9ee
gnu: r-chippeakanno: Update to 3.16.0.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.16.0.
[propagated-inputs]: Remove r-biocinstaller; add r-biocmanager.
2018-11-07 12:26:32 +01:00
Ricardo Wurmus
14520b640e
gnu: r-graph: Update to 1.60.0.
* gnu/packages/bioconductor.scm (r-graph): Update to 1.60.0.
2018-11-07 12:26:32 +01:00
Ricardo Wurmus
95ee4a466b
gnu: r-multtest: Update to 2.38.0.
* gnu/packages/bioconductor.scm (r-multtest): Update to 2.38.0.
2018-11-07 12:26:32 +01:00
Ricardo Wurmus
a92f523026
gnu: r-qdnaseq: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-qdnaseq): Update to 1.18.0.
2018-11-07 12:26:32 +01:00
Ricardo Wurmus
9add0933d0
gnu: r-cghcall: Update to 2.44.0.
* gnu/packages/bioconductor.scm (r-cghcall): Update to 2.44.0.
2018-11-07 12:26:32 +01:00
Ricardo Wurmus
46cdceef4c
gnu: r-cghbase: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-cghbase): Update to 1.42.0.
2018-11-07 12:26:32 +01:00
Ricardo Wurmus
f1c606ce8c
gnu: r-marray: Update to 1.60.0.
* gnu/packages/bioconductor.scm (r-marray): Update to 1.60.0.
2018-11-07 12:26:32 +01:00
Ricardo Wurmus
98652568a4
gnu: r-diffbind: Update to 2.10.0.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 2.10.0.
2018-11-07 12:26:31 +01:00
Ricardo Wurmus
6168692159
gnu: r-hpar: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-hpar): Update to 1.24.0.
2018-11-07 12:26:31 +01:00
Ricardo Wurmus
696e1ce263
gnu: r-graph: Update to 1.58.2.
* gnu/packages/bioconductor.scm (r-graph): Update to 1.58.2.
2018-10-30 21:39:50 +01:00
Ricardo Wurmus
09aa3d063a
gnu: Add r-ruvseq.
* gnu/packages/bioconductor.scm (r-ruvseq): New variable.
2018-10-22 13:00:24 +02:00
Ricardo Wurmus
f6e9976393
gnu: Add r-dnabarcodes.
* gnu/packages/bioconductor.scm (r-dnabarcodes): New variable.
2018-10-08 14:19:04 +02:00
Ricardo Wurmus
35c076e619
gnu: r-chippeakanno: Update to 3.14.2.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.14.2.
2018-09-09 22:26:02 +02:00
Ricardo Wurmus
a207bca2ad
gnu: r-codedepends: Move from cran to bioconductor.
* gnu/packages/cran.scm (r-codedepends): Move from here...
* gnu/packages/bioconductor.scm (r-codedepends): ...to here.
2018-09-05 20:03:08 +02:00
Ricardo Wurmus
5dfe491290
gnu: r-graph: Move from bioinformatics to bioconductor.
* gnu/packages/bioinformatics.scm (r-graph): Move from here...
* gnu/packages/bioconductor.scm (r-graph): ...to here.
2018-09-05 20:03:08 +02:00
Ricardo Wurmus
65050163e0
gnu: r-chippeakanno: Update to 3.14.1.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.14.1.
2018-09-05 20:03:03 +02:00
Ricardo Wurmus
b64ce4b725
gnu: Add r-inspect.
* gnu/packages/bioconductor.scm (r-inspect): New variable.
2018-08-16 17:04:13 +02:00
Ricardo Wurmus
aa388dc7b9
gnu: Add r-rots.
* gnu/packages/bioconductor.scm (r-rots): New variable.
2018-07-05 15:08:44 +02:00
Ricardo Wurmus
f4235c0eca
gnu: Add r-glimma.
* gnu/packages/bioconductor.scm (r-glimma): New variable.
2018-07-05 15:08:44 +02:00
Ricardo Wurmus
5da0e14285
gnu: Add r-goseq.
* gnu/packages/bioconductor.scm (r-goseq): New variable.
2018-07-05 15:08:44 +02:00
Ricardo Wurmus
27c51606ae
gnu: Add r-ctc.
* gnu/packages/bioconductor.scm (r-ctc): New variable.
2018-07-05 15:08:44 +02:00
Ricardo Wurmus
2cc5110832
gnu: Add r-genelendatabase.
* gnu/packages/bioconductor.scm (r-genelendatabase): New variable.
2018-07-05 15:08:44 +02:00
Ricardo Wurmus
cf9a29b24c
gnu: Add r-genomicinteractions.
* gnu/packages/bioconductor.scm (r-genomicinteractions): New variable.
2018-06-15 09:14:01 +02:00
Ricardo Wurmus
a32279ffb6
gnu: Add r-interactionset.
* gnu/packages/bioconductor.scm (r-interactionset): New variable.
2018-06-15 09:14:01 +02:00
Ricardo Wurmus
6ffdfe6a01
gnu: Add r-riboseqr.
* gnu/packages/bioconductor.scm (r-riboseqr): New variable.
2018-06-15 07:43:23 +02:00
Ricardo Wurmus
0490f9de88
gnu: Add r-riboprofiling.
* gnu/packages/bioconductor.scm (r-riboprofiling): New variable.
2018-06-15 07:43:22 +02:00
Ricardo Wurmus
609f4ad12f
gnu: Add r-chipcomp.
* gnu/packages/bioconductor.scm (r-chipcomp): New variable.
2018-06-15 07:43:22 +02:00
Ricardo Wurmus
2bece692a6
gnu: Add r-bsgenome-mmusculus-ucsc-mm9-masked.
* gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm9-masked): New
variable.
2018-06-15 07:43:22 +02:00
Ricardo Wurmus
6fbd759b13
gnu: Add r-bsgenome-hsapiens-ucsc-hg19-masked.
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ucsc-hg19-masked): New
variable.
2018-06-15 07:43:22 +02:00
Ricardo Wurmus
dfac7eb917
gnu: Add r-bsgenome-dmelanogaster-ucsc-dm3-masked.
* gnu/packages/bioconductor.scm (r-bsgenome-dmelanogaster-ucsc-dm3-masked):
New variable.
2018-06-15 07:43:22 +02:00
Ricardo Wurmus
bb15b581f7
gnu: Add r-bayseq.
* gnu/packages/bioconductor.scm (r-bayseq): New variable.
2018-06-15 07:43:22 +02:00
Ricardo Wurmus
81b0181b6f
gnu: r-qdnaseq: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-qdnaseq): Update to 1.16.0.
[propagated-inputs]: Add r-biocparallel.
2018-06-02 13:39:06 +02:00
Ricardo Wurmus
5c0df206cf
gnu: r-cghcall: Update to 2.42.0.
* gnu/packages/bioconductor.scm (r-cghcall): Update to 2.42.0.
2018-06-02 13:39:06 +02:00
Ricardo Wurmus
205df4a4cb
gnu: r-cghbase: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-cghbase): Update to 1.40.0.
2018-06-02 13:39:06 +02:00
Ricardo Wurmus
6748708883
gnu: r-marray: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-marray): Update to 1.58.0.
[propagated-inputs]: Remove r-biobase.
2018-06-02 13:39:06 +02:00
Ricardo Wurmus
f794e85daa
gnu: r-chippeakanno: Update to 3.14.0.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.14.0.
[propagated-inputs]: Add r-biostrings, r-delayedarray, r-genomicranges,
r-iranges, and r-s4vectors.
2018-06-02 13:39:06 +02:00
Ricardo Wurmus
43734b4727
gnu: r-ripseeker: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-ripseeker): Update to 1.20.0.
2018-06-02 13:39:06 +02:00
Ricardo Wurmus
45bbccf4e7
gnu: r-diffbind: Update to 2.8.0.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 2.8.0.
[propagated-inputs]: Add r-genomicranges, r-ggplot2, and
r-summarizedexperiment.
2018-06-02 13:39:06 +02:00
Ricardo Wurmus
72427c721d
gnu: r-regioner: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.12.0.
[propagated-inputs]: Add r-s4vectors.
2018-06-02 13:39:06 +02:00
Ricardo Wurmus
2f5b3d8e90
gnu: r-hpar: Update to 1.22.2.
* gnu/packages/bioconductor.scm (r-hpar): Update to 1.22.2.
2018-06-02 13:39:06 +02:00
Ricardo Wurmus
183db725a4
gnu: Add r-bsgenome-dmelanogaster-ucsc-dm6.
* gnu/packages/bioconductor.scm (r-bsgenome-dmelanogaster-ucsc-dm6): New variable.
2018-05-15 12:56:53 +02:00
Tobias Geerinckx-Rice
f39938b177
gnu: r-multtest: Update to 2.36.0.
* gnu/packages/bioconductor.scm (r-multtest): Update to 2.36.0.
2018-05-04 02:22:01 +02:00
Roel Janssen
0ef8cc9c1c
gnu: Add r-qdnaseq.
* gnu/packages/bioconductor.scm (r-qdnaseq): New variable.
2018-04-24 14:12:32 +02:00
Roel Janssen
67ee83d6c3
gnu: Add r-cghcall.
* gnu/packages/bioconductor.scm (r-cghcall): New variable.
2018-04-24 14:12:15 +02:00
Roel Janssen
0416a0d4d5
gnu: Add r-cghbase.
* gnu/packages/bioconductor.scm (r-cghbase): New variable.
2018-04-24 14:11:51 +02:00
Roel Janssen
164502d819
gnu: Add r-marray.
* gnu/packages/bioconductor.scm (r-marray): New variable.
2018-04-24 14:11:19 +02:00